View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20610_low_5 (Length: 544)

Name: NF20610_low_5
Description: NF20610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20610_low_5
NF20610_low_5
[»] chr5 (30 HSPs)
chr5 (17-533)||(15844141-15844657)
chr5 (17-148)||(15829586-15829717)
chr5 (116-281)||(4796281-4796447)
chr5 (116-281)||(31973449-31973615)
chr5 (116-268)||(16275178-16275330)
chr5 (186-306)||(31973211-31973331)
chr5 (188-269)||(24994007-24994088)
chr5 (187-269)||(28010203-28010285)
chr5 (187-269)||(873783-873865)
chr5 (188-261)||(24918107-24918180)
chr5 (116-250)||(904768-904903)
chr5 (386-425)||(22198986-22199025)
chr5 (187-250)||(27760345-27760408)
chr5 (385-424)||(32661593-32661632)
chr5 (187-269)||(27760010-27760092)
chr5 (187-269)||(37995721-37995803)
chr5 (187-244)||(1028180-1028237)
chr5 (187-244)||(13843657-13843714)
chr5 (342-444)||(13843758-13843856)
chr5 (187-244)||(13843973-13844030)
chr5 (187-234)||(17016180-17016227)
chr5 (189-244)||(20811414-20811469)
chr5 (173-244)||(30587859-30587930)
chr5 (405-446)||(17016097-17016138)
chr5 (216-269)||(17435354-17435407)
chr5 (402-443)||(18914369-18914410)
chr5 (189-234)||(20837779-20837824)
chr5 (386-443)||(30366674-30366731)
chr5 (386-430)||(10344235-10344279)
chr5 (386-442)||(31973135-31973191)
[»] chr8 (36 HSPs)
chr8 (116-262)||(30590390-30590537)
chr8 (171-281)||(38887024-38887134)
chr8 (122-270)||(26639045-26639194)
chr8 (116-260)||(26642531-26642676)
chr8 (92-250)||(16956586-16956747)
chr8 (116-281)||(39590622-39590786)
chr8 (171-269)||(44933152-44933250)
chr8 (190-270)||(28488422-28488502)
chr8 (187-269)||(23027915-23027997)
chr8 (171-281)||(25971349-25971459)
chr8 (186-270)||(34529921-34530005)
chr8 (187-269)||(23027592-23027674)
chr8 (187-269)||(31766936-31767018)
chr8 (186-279)||(15157007-15157100)
chr8 (113-229)||(16213148-16213265)
chr8 (185-250)||(20298601-20298666)
chr8 (187-250)||(21085235-21085298)
chr8 (324-392)||(25971171-25971239)
chr8 (392-443)||(30966073-30966124)
chr8 (386-424)||(294456-294494)
chr8 (340-443)||(3183854-3183953)
chr8 (199-269)||(3184002-3184072)
chr8 (372-430)||(10025369-10025427)
chr8 (192-230)||(18900826-18900864)
chr8 (368-442)||(30590511-30590585)
chr8 (186-244)||(36997126-36997184)
chr8 (400-446)||(39124983-39125029)
chr8 (386-443)||(45031151-45031209)
chr8 (187-244)||(18905816-18905873)
chr8 (364-446)||(23027796-23027873)
chr8 (364-445)||(29053707-29053788)
chr8 (394-443)||(45031369-45031418)
chr8 (385-425)||(10368685-10368725)
chr8 (372-443)||(10615141-10615213)
chr8 (402-446)||(27402413-27402457)
chr8 (382-442)||(30014321-30014380)
[»] chr4 (52 HSPs)
chr4 (117-279)||(48046281-48046445)
chr4 (116-281)||(30490969-30491132)
chr4 (192-270)||(26942679-26942757)
chr4 (173-281)||(22870576-22870684)
chr4 (186-270)||(54595147-54595231)
chr4 (121-295)||(52043098-52043273)
chr4 (187-269)||(53738295-53738377)
chr4 (173-250)||(3137707-3137783)
chr4 (368-425)||(17912821-17912878)
chr4 (116-260)||(23311485-23311629)
chr4 (189-270)||(46332622-46332703)
chr4 (187-269)||(15665087-15665170)
chr4 (187-270)||(36558553-36558636)
chr4 (368-423)||(49190160-49190215)
chr4 (192-281)||(26942464-26942553)
chr4 (368-440)||(24001527-24001599)
chr4 (324-380)||(26942591-26942647)
chr4 (187-258)||(45427339-45427411)
chr4 (187-270)||(29669765-29669847)
chr4 (187-250)||(29734515-29734578)
chr4 (342-446)||(45427197-45427297)
chr4 (384-443)||(46676680-46676739)
chr4 (189-259)||(43971984-43972054)
chr4 (187-269)||(43972290-43972372)
chr4 (353-442)||(54595326-54595418)
chr4 (187-244)||(991164-991221)
chr4 (369-425)||(22572435-22572492)
chr4 (187-244)||(50857972-50858029)
chr4 (187-244)||(50858288-50858345)
chr4 (187-244)||(53740142-53740199)
chr4 (187-250)||(29669450-29669512)
chr4 (342-446)||(29669623-29669723)
chr4 (368-437)||(39778351-39778422)
chr4 (128-234)||(54595404-54595511)
chr4 (177-263)||(3137021-3137107)
chr4 (347-425)||(3137426-3137504)
chr4 (388-442)||(21210213-21210267)
chr4 (400-442)||(37130067-37130109)
chr4 (191-269)||(48843108-48843186)
chr4 (386-443)||(50816501-50816559)
chr4 (186-244)||(52214575-52214633)
chr4 (386-443)||(56501499-56501557)
chr4 (187-265)||(56509548-56509626)
chr4 (187-244)||(990507-990564)
chr4 (394-443)||(7546583-7546631)
chr4 (187-244)||(45427023-45427080)
chr4 (392-425)||(50830708-50830741)
chr4 (364-446)||(51469540-51469618)
chr4 (192-244)||(990998-991050)
chr4 (372-416)||(2637692-2637736)
chr4 (386-442)||(30490939-30490995)
chr4 (382-414)||(50816707-50816739)
[»] chr1 (59 HSPs)
chr1 (112-270)||(34626785-34626944)
chr1 (116-267)||(12410342-12410495)
chr1 (171-281)||(18998634-18998744)
chr1 (172-281)||(5087830-5087939)
chr1 (173-286)||(19811084-19811197)
chr1 (116-280)||(41590244-41590407)
chr1 (173-281)||(51515637-51515746)
chr1 (173-270)||(6868067-6868164)
chr1 (173-270)||(19810771-19810867)
chr1 (187-269)||(4022212-4022294)
chr1 (153-281)||(7907896-7908026)
chr1 (119-268)||(40566284-40566434)
chr1 (324-425)||(19810934-19811035)
chr1 (173-234)||(51188887-51188948)
chr1 (179-295)||(33248409-33248525)
chr1 (179-295)||(33268581-33268697)
chr1 (171-231)||(41590603-41590663)
chr1 (348-443)||(40571589-40571683)
chr1 (189-269)||(45264598-45264678)
chr1 (136-281)||(12581378-12581525)
chr1 (188-267)||(19459660-19459739)
chr1 (121-270)||(18998327-18998477)
chr1 (368-442)||(40188674-40188748)
chr1 (364-442)||(41590503-41590580)
chr1 (387-443)||(10239493-10239549)
chr1 (173-269)||(13978520-13978616)
chr1 (386-442)||(17557708-17557764)
chr1 (116-208)||(17557738-17557829)
chr1 (386-425)||(21641405-21641444)
chr1 (187-250)||(31305665-31305728)
chr1 (116-213)||(19809973-19810070)
chr1 (187-269)||(33879865-33879947)
chr1 (187-269)||(33964308-33964390)
chr1 (392-441)||(347107-347156)
chr1 (385-442)||(7525050-7525107)
chr1 (187-244)||(19937130-19937187)
chr1 (364-446)||(20735581-20735659)
chr1 (210-263)||(25436982-25437035)
chr1 (187-250)||(8520180-8520243)
chr1 (187-250)||(20735476-20735539)
chr1 (211-281)||(14623130-14623200)
chr1 (193-251)||(15013478-15013536)
chr1 (187-233)||(17419758-17419804)
chr1 (386-424)||(19809943-19809981)
chr1 (386-424)||(19810683-19810721)
chr1 (116-169)||(7525023-7525076)
chr1 (173-270)||(8000445-8000545)
chr1 (386-443)||(13031126-13031183)
chr1 (382-443)||(13978831-13978892)
chr1 (116-149)||(19609200-19609233)
chr1 (187-244)||(43423239-43423296)
chr1 (402-446)||(4022126-4022170)
chr1 (403-443)||(17154852-17154892)
chr1 (394-442)||(19609178-19609226)
chr1 (402-446)||(33879779-33879823)
chr1 (402-446)||(33964432-33964476)
chr1 (402-446)||(35926249-35926293)
chr1 (370-425)||(40566046-40566102)
chr1 (402-446)||(43423338-43423382)
[»] chr3 (31 HSPs)
chr3 (116-262)||(51917822-51917969)
chr3 (119-268)||(35035036-35035186)
chr3 (171-270)||(662660-662759)
chr3 (116-279)||(39225040-39225208)
chr3 (193-295)||(54861434-54861536)
chr3 (369-438)||(54861592-54861661)
chr3 (138-230)||(351157-351250)
chr3 (347-440)||(25568562-25568655)
chr3 (187-269)||(14170086-14170168)
chr3 (171-261)||(25568440-25568530)
chr3 (192-269)||(24860152-24860229)
chr3 (186-250)||(13769377-13769441)
chr3 (368-443)||(35018502-35018578)
chr3 (186-250)||(45443234-45443298)
chr3 (187-250)||(41380678-41380741)
chr3 (187-250)||(43101458-43101521)
chr3 (187-250)||(54368993-54369056)
chr3 (187-244)||(44573286-44573343)
chr3 (364-446)||(44573698-44573776)
chr3 (383-443)||(50187399-50187459)
chr3 (187-234)||(4255480-4255527)
chr3 (187-250)||(4256188-4256251)
chr3 (187-265)||(3985712-3985790)
chr3 (373-443)||(30326933-30327003)
chr3 (175-229)||(53789095-53789149)
chr3 (187-244)||(27219289-27219346)
chr3 (364-441)||(49812221-49812298)
chr3 (386-439)||(49812444-49812497)
chr3 (402-446)||(13769292-13769336)
chr3 (402-446)||(21750534-21750578)
chr3 (386-422)||(39225010-39225046)
[»] chr7 (49 HSPs)
chr7 (116-228)||(14595896-14596009)
chr7 (116-228)||(16015424-16015537)
chr7 (116-295)||(39079956-39080137)
chr7 (101-270)||(41387464-41387636)
chr7 (96-267)||(30610801-30610973)
chr7 (328-425)||(39079868-39079965)
chr7 (122-281)||(14596213-14596373)
chr7 (122-281)||(16015741-16015901)
chr7 (116-250)||(32000771-32000906)
chr7 (173-270)||(422734-422831)
chr7 (174-270)||(28359017-28359114)
chr7 (195-295)||(39079724-39079824)
chr7 (174-234)||(41389276-41389336)
chr7 (174-270)||(46753061-46753157)
chr7 (173-270)||(12840645-12840742)
chr7 (394-462)||(27820889-27820957)
chr7 (190-270)||(41709952-41710032)
chr7 (116-229)||(21033845-21033960)
chr7 (173-279)||(46870238-46870345)
chr7 (117-262)||(25589087-25589232)
chr7 (173-270)||(12305129-12305226)
chr7 (197-281)||(3973083-3973167)
chr7 (191-267)||(10193467-10193543)
chr7 (186-270)||(23721077-23721161)
chr7 (187-250)||(257354-257417)
chr7 (187-270)||(1663692-1663774)
chr7 (116-250)||(10406601-10406736)
chr7 (364-423)||(14596156-14596215)
chr7 (364-423)||(16015684-16015743)
chr7 (364-439)||(21048672-21048747)
chr7 (173-231)||(14092256-14092314)
chr7 (173-231)||(14402274-14402332)
chr7 (187-269)||(28909967-28910049)
chr7 (121-206)||(30899010-30899096)
chr7 (386-442)||(16015394-16015450)
chr7 (190-250)||(43167983-43168043)
chr7 (187-250)||(1661278-1661341)
chr7 (394-441)||(6427034-6427081)
chr7 (392-443)||(39164689-39164740)
chr7 (187-250)||(41670822-41670885)
chr7 (187-229)||(8585066-8585108)
chr7 (186-243)||(1504885-1504942)
chr7 (388-425)||(20171131-20171168)
chr7 (368-425)||(24965956-24966013)
chr7 (402-446)||(257268-257312)
chr7 (402-446)||(1661192-1661236)
chr7 (386-442)||(14595866-14595922)
chr7 (392-440)||(21033611-21033659)
chr7 (187-259)||(29780092-29780164)
[»] chr2 (39 HSPs)
chr2 (116-270)||(9889334-9889496)
chr2 (116-266)||(18183404-18183555)
chr2 (120-270)||(39583434-39583585)
chr2 (173-306)||(26760899-26761032)
chr2 (116-234)||(14407958-14408078)
chr2 (121-269)||(5511822-5511970)
chr2 (187-270)||(15820188-15820271)
chr2 (392-442)||(3008422-3008472)
chr2 (174-262)||(3003981-3004070)
chr2 (175-244)||(11339771-11339840)
chr2 (205-270)||(1544085-1544152)
chr2 (177-229)||(35872850-35872902)
chr2 (187-250)||(18901951-18902014)
chr2 (187-269)||(5424843-5424925)
chr2 (187-244)||(3976558-3976615)
chr2 (171-260)||(18959505-18959594)
chr2 (173-309)||(21373878-21374023)
chr2 (210-263)||(26529454-26529507)
chr2 (187-244)||(43169202-43169259)
chr2 (368-425)||(43275510-43275567)
chr2 (186-234)||(21213971-21214019)
chr2 (368-426)||(3185934-3185993)
chr2 (376-443)||(7252233-7252300)
chr2 (187-250)||(17509063-17509126)
chr2 (392-443)||(33456023-33456074)
chr2 (347-446)||(3976421-3976516)
chr2 (187-233)||(3977090-3977136)
chr2 (375-425)||(45634485-45634535)
chr2 (187-244)||(3976242-3976299)
chr2 (386-430)||(11064262-11064307)
chr2 (364-446)||(21214168-21214246)
chr2 (187-244)||(23054286-23054343)
chr2 (187-244)||(43195744-43195801)
chr2 (402-446)||(2333359-2333403)
chr2 (386-414)||(13982119-13982147)
chr2 (186-230)||(21214287-21214331)
chr2 (173-209)||(33070117-33070153)
chr2 (186-270)||(33070356-33070440)
chr2 (116-199)||(36901147-36901231)
[»] chr6 (25 HSPs)
chr6 (189-281)||(1205639-1205731)
chr6 (116-228)||(1206194-1206307)
chr6 (191-295)||(9602078-9602182)
chr6 (116-270)||(18286819-18286974)
chr6 (192-306)||(1205956-1206070)
chr6 (349-442)||(1206127-1206220)
chr6 (165-244)||(12308556-12308635)
chr6 (186-270)||(9237093-9237177)
chr6 (186-250)||(10733524-10733588)
chr6 (194-256)||(130761-130824)
chr6 (174-262)||(9216468-9216560)
chr6 (187-250)||(10418425-10418488)
chr6 (187-250)||(24055196-24055259)
chr6 (187-269)||(12134570-12134652)
chr6 (187-244)||(1408971-1409028)
chr6 (181-268)||(16509712-16509800)
chr6 (187-270)||(31960-32043)
chr6 (187-250)||(19054447-19054510)
chr6 (187-249)||(9156188-9156250)
chr6 (368-441)||(19385571-19385643)
chr6 (187-244)||(19753691-19753748)
chr6 (186-250)||(1744928-1744992)
chr6 (190-250)||(21043871-21043931)
chr6 (190-250)||(21067147-21067207)
chr6 (190-250)||(21088938-21088998)


Alignment Details
Target: chr5 (Bit Score: 497; Significance: 0; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 497; E-Value: 0
Query Start/End: Original strand, 17 - 533
Target Start/End: Original strand, 15844141 - 15844657
Alignment:
Q  17 agtaggcatctacatgaaaaaacccaaatgtgtttagaattcccaatgacttagaagttacatatattattcttggaattttaggttgggtctaataatc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |    
T  15844141 agtaggcatctacatgaaaaaacccaaatgtgtttagaattcccaatgacttagaagttacatattttattcttggaattttgggttgggtctaataacc 15844240  T
Q  117 ttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgtcatatctctaggaaatgtgggactaaatccaccccttcacactc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15844241 ttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgtcatatctctaggaaatgtgggactaaatccaccccttcacactc 15844340  T
Q  217 aacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctagggtcagattgcaatgatggaagaattttcaccgcttg 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15844341 aacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctagggtcagattgcaatgatggaagaattttcaccgcttg 15844440  T
Q  317 gccccaagagcctgaaatgtgggcaatgctggaagcccaacaacaagtctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatc 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15844441 gccccaagagcctgaaatgtgggcaatgctggaagcccaacaacaagtctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatc 15844540  T
Q  417 ttacaaaactagctagtaaggtgaggagtgaggactgcctctacttgtaaggtaggatctaattttttctaccttcctataaccgacacagcagagtatt 516  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15844541 ttacaaaactggctagtaaggtgaggagtgaggactgcctctacttgtaaggtaggatctaattttttctaccttcctataaccgacgcagcagagtatt 15844640  T
Q  517 ttaatgaaattgttcat 533  Q
    |||||||||||||||||    
T  15844641 ttaatgaaattgttcat 15844657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 15829586 - 15829717
Alignment:
Q  17 agtaggcatctacatgaaaaaacccaaatgtgtttagaattcccaatgacttagaagttacatatattattcttggaattttaggttgggtctaataatc 116  Q
    |||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||  ||||||| | ||||||| ||||| ||||||||| |    
T  15829586 agtaggcatctacattgaaaaacccaaatgtgtttagaattcccattgacttagaagttacattcattattcgtagaattttgggttgagtctaataacc 15829685  T
Q  117 ttacaaaaccggcttgtatggtgagggcttcc 148  Q
    |||||||||||||||||| |||||||||||||    
T  15829686 ttacaaaaccggcttgtaaggtgagggcttcc 15829717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 116 - 281
Target Start/End: Complemental strand, 4796447 - 4796281
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    ||||||||||| ||||||| |||||||||| ||||  |||||||| ||| |||| || |||||||||| | |||||| ||||||||||||||||||||||    
T  4796447 cttacaaaacccgcttgtaaggtgagggctgcccatgctttataaacactacacatgccatatctctaagcaatgtgtgactaaatccaccccttcacac 4796348  T
Q  215 tcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctaggg 281  Q
     ||||||||||||||||||| ||| ||||| ||||| ||||||||||| |||||||  |||||||||    
T  4796347 ccaacacaatgaaggtgttggaggctgcaatgaaggcaacccaaatgctgcaattatgcggctaggg 4796281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 116 - 281
Target Start/End: Original strand, 31973449 - 31973615
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgtc-atatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    ||||||||||| || |||  |||||||||| |||||||||||||| ||| |||  | | ||||||||||  ||||||||||||||||||||| |||||||    
T  31973449 cttacaaaaccagcgtgtgaggtgagggctgcccaaactttataaacactacataggccatatctctagacaatgtgggactaaatccaccctttcacac 31973548  T
Q  215 tcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctaggg 281  Q
     ||||||||||||||||||| ||| |||||  |||| ||| |||||||| ||||||  |||||||||    
T  31973549 ccaacacaatgaaggtgttggaggctgcaataaaggcaactcaaatgcctcaattaggcggctaggg 31973615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 116 - 268
Target Start/End: Complemental strand, 16275330 - 16275178
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    |||||||||||  |||||| |||||||||| ||||||||||| |  ||| ||||  | |||||||||||| |||||||||||||||||||||||| |||     
T  16275330 cttacaaaaccaccttgtaaggtgagggctgcccaaactttacacacactacacaggccatatctctaggcaatgtgggactaaatccaccccttgacat 16275231  T
Q  215 tcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaat 268  Q
     |||||||||||||||   | ||| ||||| ||||| |||||||||||||||||    
T  16275230 ccaacacaatgaaggt-acggaggctgcaatgaaggcaacccaaatgccgcaat 16275178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 186 - 306
Target Start/End: Original strand, 31973211 - 31973331
Alignment:
Q  186 aatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctagggtcag 285  Q
    |||| ||||||||||||||||||||| || |||||||| |||||||||| || || ||| ||||| |||||||||||||||||||  ||||| ||| | |    
T  31973211 aatgagggactaaatccaccccttcaaacccaacacaacgaaggtgttggagatttcaatgaaggaaacccaaatgccgcaattaggcggctgggggcgg 31973310  T
Q  286 attgcaatgatggaagaattt 306  Q
    | |||||||| || |||||||    
T  31973311 actgcaatgaaggcagaattt 31973331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 24994088 - 24994007
Alignment:
Q  188 tgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    |||||||||||||||||||| ||| |  ||||||||||||||||||| | ||||||| |||||||| ||||||| |||||||    
T  24994088 tgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaagttgcaatgaaggtaaaccaaatgtcgcaatt 24994007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 28010203 - 28010285
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| ||||| || ||||| |||||||||    
T  28010203 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttgaaggctgcaatgaaggcaagccaaaggccgcaatt 28010285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 873783 - 873865
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| | | ||||| ||||| || ||||| |||||||||    
T  873783 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaagctgcaatgaaggcaaaccaaaggccgcaatt 873865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 261
Target Start/End: Complemental strand, 24918180 - 24918107
Alignment:
Q  188 tgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatg 261  Q
    |||||||||||||||||||| ||| |  ||||||||||||||||||| | ||||||| ||||| || |||||||    
T  24918180 tgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaagttgcaatgaaggcaaaccaaatg 24918107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 116 - 250
Target Start/End: Original strand, 904768 - 904903
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacact-gtcatatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    ||||||||||||||||||| |||||||| | | |||  ||||||| ||| ||||  | ||||| | |  | |||||||||||||||||||||||||| |     
T  904768 cttacaaaaccggcttgtaaggtgagggatgctcaagttttataaacactacacaagccatatatgttagcaatgtgggactaaatccaccccttcaaag 904867  T
Q  215 tcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
     ||||||||||||||  ||| ||| ||||| |||||    
T  904868 gcaacacaatgaagggcttgaaggctgcaatgaagg 904903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 425
Target Start/End: Original strand, 22198986 - 22199025
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaatcttacaaaac 425  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  22198986 tcttaaaatttgggttgggcctaactcaaccttacaaaac 22199025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 27760408 - 27760345
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  27760408 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 27760345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 424
Target Start/End: Complemental strand, 32661632 - 32661593
Alignment:
Q  385 atcttaaaatttgggttgggcctaactcaatcttacaaaa 424  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  32661632 atcttagaatttgggttgggcctaactcaatcttacaaaa 32661593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 27760092 - 27760010
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||||||||||| ||| |  |||||||||||| |||||| ||| ||||| |||||| | ||||| | |||||||    
T  27760092 atgtgggactaaatccaccccctcaaagccaacacaatgaaagtgttggaggctgcaatgaaggttaaccaaaggtcgcaatt 27760010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 37995721 - 37995803
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| | | || || ||||| || ||||| |||||||||    
T  37995721 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaagctggaatgaaggcaaaccaaaggccgcaatt 37995803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 1028180 - 1028237
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  1028180 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 1028237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 13843714 - 13843657
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  13843714 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 13843657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 342 - 444
Target Start/End: Complemental strand, 13843856 - 13843758
Alignment:
Q  342 atgctggaagcccaacaacaagtctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgag 441  Q
    |||| ||||||||||| | |  ||||||||||||||||| ||||| || |||||||    ||||||||||||  ||||||||||  ||| ||||||||||    
T  13843856 atgcaggaagcccaacgatagatctaggataggctctgataccatgttgaaatttg----gggcctaactcatccttacaaaaccggcttgtaaggtgag 13843761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 13844030 - 13843973
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  13844030 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 13843973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 17016180 - 17016227
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttg 234  Q
    ||||||||||||||||||||| ||| |  |||||||||||||||||||    
T  17016180 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttg 17016227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 20811469 - 20811414
Alignment:
Q  189 gtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  20811469 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 20811414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 30587859 - 30587930
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    |||||||||  | ||||||||||||||||||||| || |  | ||||||| ||||||||||| |||||||||    
T  30587859 catatctctgagcaatgtgggactaaatccacccttttaagcccaacacattgaaggtgttgaaggttgcaa 30587930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 446
Target Start/End: Original strand, 17016097 - 17016138
Alignment:
Q  405 cctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    |||||||||  ||||||||||||||| |||||||||||||||    
T  17016097 cctaactcatccttacaaaactagcttgtaaggtgaggagtg 17016138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 17435354 - 17435407
Alignment:
Q  216 caacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||||||||| ||||||||| ||||  || ||||||||| |||||    
T  17435354 caacacaatgaaggtgttggaggttgcaatgaagacaaaccaaatgcctcaatt 17435407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 443
Target Start/End: Original strand, 18914369 - 18914410
Alignment:
Q  402 gggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    |||||||||||| ||||||||||| |||| ||||||||||||    
T  18914369 gggcctaactcattcttacaaaaccagcttgtaaggtgagga 18914410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 20837824 - 20837779
Alignment:
Q  189 gtgggactaaatccaccccttcacactcaacacaatgaaggtgttg 234  Q
    ||||||||||||||||||| ||| |  |||||||||||||||||||    
T  20837824 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttg 20837779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 443
Target Start/End: Complemental strand, 30366731 - 30366674
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    ||||| ||||||| ||||||||||||||| |||||||| |  ||| ||||||||||||    
T  30366731 tcttagaatttggtttgggcctaactcaaccttacaaagccggcttgtaaggtgagga 30366674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 10344279 - 10344235
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaatcttacaaaactagct 430  Q
    ||||| |||||| ||||  ||||||||||||||||||||||||||    
T  10344279 tcttagaatttgagttgaacctaactcaatcttacaaaactagct 10344235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 442
Target Start/End: Original strand, 31973135 - 31973191
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagg 442  Q
    ||||| |||||||||||||||||||| || ||||||||||  ||  |||||||||||    
T  31973135 tcttagaatttgggttgggcctaactgaaccttacaaaaccggcatgtaaggtgagg 31973191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 3e-37; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 116 - 262
Target Start/End: Complemental strand, 30590537 - 30590390
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||| ||| |||| || ||||| |||| | |||||||||||||||||||||||||||||    
T  30590537 cttacaaaaccggcttgtaaggtgagggctgcccaagctttataaacactacacatgccatatatctatgcaatgtgggactaaatccaccccttcacac 30590438  T
Q  215 tcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgc 262  Q
      |||||||||||||||||| ||| ||||| ||||| |||||||||||    
T  30590437 caaacacaatgaaggtgttggaggctgcaatgaaggcaacccaaatgc 30590390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 171 - 281
Target Start/End: Complemental strand, 38887134 - 38887024
Alignment:
Q  171 gtcatatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||||||||||||| ||||||||| |||||| |||||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  38887134 gtcatatctctaggcaatgtgggattaaatcaaccccttcacacccaacacaatgaaggtgttggaggctgcaacgaaggcaacccaaatgccgcaatta 38887035  T
Q  271 cacggctaggg 281  Q
      |||||||||    
T  38887034 ggcggctaggg 38887024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 122 - 270
Target Start/End: Complemental strand, 26639194 - 26639045
Alignment:
Q  122 aaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttcacactcaaca 220  Q
    ||||||||||||| ||||| |||||| |||| ||||||| ||| |||| |||| |||||| ||| |||||||||||||||||||||| ||||||||||||    
T  26639194 aaaccggcttgtaaggtgaaggcttctcaaaatttataaacactacacatgtcgtatctcaaggcaatgtgggactaaatccaccccctcacactcaaca 26639095  T
Q  221 caatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    ||||||||||||||  |  ||||| ||||| |||||||||| ||||||||    
T  26639094 caatgaaggtgttggggactgcaatgaaggaaacccaaatgtcgcaatta 26639045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 116 - 260
Target Start/End: Complemental strand, 26642676 - 26642531
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    ||||| ||||||||||||| ||||| ||||||  ||| ||||||| ||| |||| ||||||||||||||| ||||||| |||||||||||||  ||||||    
T  26642676 cttaccaaaccggcttgtaaggtgaaggcttcttaaaatttataaacactacacatgtcatatctctaggcaatgtggaactaaatccacccaatcacac 26642577  T
Q  215 tcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaat 260  Q
    |||||||||||||||||||  ||  ||||| ||||| |||||||||    
T  26642576 tcaacacaatgaaggtgtttgagactgcaatgaaggaaacccaaat 26642531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 16956747 - 16956586
Alignment:
Q  92 gaattttaggttgggtctaa-taatc-ttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaat 188  Q
    |||||||||||||||||||| | ||| ||||||||||  |||||| |||||||||| |||||| ||||||| ||| || | |||| |||||||||| |||    
T  16956747 gaattttaggttgggtctaactcatccttacaaaaccaccttgtaaggtgagggctgcccaaaatttataaacactacgcatgtcgtatctctaggtaat 16956648  T
Q  189 gtgggactaaatccaccccttcacactca-acacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    | ||||||||| ||||||| |||||| || ||||||||||| ||||| ||||||||| |||||    
T  16956647 gagggactaaa-ccaccccctcacacacacacacaatgaagatgttggaggttgcaatgaagg 16956586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 116 - 281
Target Start/End: Complemental strand, 39590786 - 39590622
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgtc-atatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    |||||||||| || ||||| |||||||||| ||||  |||||||| ||| | || | | ||||||||| | ||||  |||||| ||||||||||||||||    
T  39590786 cttacaaaactggtttgtaaggtgagggctgcccatgctttataaacactagacaggccatatctctaagcaatgctggactatatccaccccttcacac 39590687  T
Q  215 tcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctaggg 281  Q
     ||||||||||||||||||| ||  ||||| |||||  ||||||||||||||||||  |||||||||    
T  39590686 -caacacaatgaaggtgttggagactgcaatgaagg-cacccaaatgccgcaattaggcggctaggg 39590622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 44933152 - 44933250
Alignment:
Q  171 gtcatatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    |||||||||||| |  ||||| ||||||||||||||||||| || ||||||||||||||||||| ||| ||||| ||||| |||||||| || ||||||    
T  44933152 gtcatatctctaagtgatgtgagactaaatccaccccttcaaacccaacacaatgaaggtgttggagggtgcaatgaaggcaacccaaaggctgcaatt 44933250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 28488422 - 28488502
Alignment:
Q  190 tgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||||||||||||||||||||| || ||||||||||||||||||  ||| ||||| ||||| ||| |||||||| ||||||    
T  28488422 tgggactaaatccaccccttcaaacccaacacaatgaaggtgtttaaggctgcaatgaaggcaactcaaatgccacaatta 28488502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 23027915 - 23027997
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| ||||| || ||||| |||||||||    
T  23027915 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttgaaggctgcaatgaaggcaagccaaaggccgcaatt 23027997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 171 - 281
Target Start/End: Complemental strand, 25971459 - 25971349
Alignment:
Q  171 gtcatatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    ||||||||||| || |||||| |||| ||||||||||||||||| || |||||||||||||||| | | ||||| |||||  ||| ||||| | ||||||    
T  25971459 gtcatatctcttggcaatgtgtgactgaatccaccccttcacacccagcacaatgaaggtgttggatgctgcaatgaaggctaccaaaatgtcacaatta 25971360  T
Q  271 cacggctaggg 281  Q
      |||||||||    
T  25971359 ggcggctaggg 25971349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 34530005 - 34529921
Alignment:
Q  186 aatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||| | | ||| |  || ||||| |||||||||||||||||||    
T  34530005 aatgtgggactaaatccgcccctttacacccaacacaatgaaggtataggaggcttaaatgaaggcaacccaaatgccgcaatta 34529921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 23027592 - 23027674
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||  ||| ||||| ||||| || |||||||| ||||||    
T  23027592 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgtttgaggctgcaatgaaggcaagccaaatgctgcaatt 23027674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 31767018 - 31766936
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||||||||||| ||| |  |||||||||||||| |||| ||| ||||| ||||| || ||||| |||||||||    
T  31767018 atgtgggactaaatccaccccctcaaagccaacacaatgaaggggttggaggctgcaatgaaggcaaaccaaaggccgcaatt 31766936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 279
Target Start/End: Complemental strand, 15157100 - 15157007
Alignment:
Q  186 aatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctag 279  Q
    ||||||||||||||||||||| ||||||| |||||||| ||| |   || ||| |||||  |||| ||||||||| ||||||||| ||||||||    
T  15157100 aatgtgggactaaatccaccctttcacacccaacacaacgaacgcaatggaggctgcaattaagggaacccaaattccgcaattagacggctag 15157007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 16213148 - 16213265
Alignment:
Q  113 aatcttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgtc-atatctctaggaaatgtgggactaaatccaccccttca 211  Q
    |||||||| |||  |||| ||| |||||||| | ||||||| |||||| ||| |||  | | ||||||||||| | |||| |||||||||||||||||||    
T  16213148 aatcttaccaaatgggctggtaaggtgagggttacccaaacattataatcactacataggccatatctctaggcagtgtgagactaaatccaccccttca 16213247  T
Q  212 cactcaacacaatgaagg 229  Q
    ||  ||||||||||||||    
T  16213248 catccaacacaatgaagg 16213265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 20298601 - 20298666
Alignment:
Q  185 aaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  20298601 aaatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 20298666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 21085235 - 21085298
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  21085235 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 21085298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 392
Target Start/End: Complemental strand, 25971239 - 25971171
Alignment:
Q  324 gagcctgaaatgtgggcaatgctggaagcccaacaacaagtctaggataggctctgacaccatcttaaa 392  Q
    ||||||||| ||||| | |||| ||||| |||||||||  |||||||||||||||||  ||||||||||    
T  25971239 gagcctgaagtgtggacgatgcgggaagtccaacaacagatctaggataggctctgattccatcttaaa 25971171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 443
Target Start/End: Original strand, 30966073 - 30966124
Alignment:
Q  392 aatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    |||||||||||||||||||||||  |||||||||  ||| ||||||||||||    
T  30966073 aatttgggttgggcctaactcaaatttacaaaaccggcttgtaaggtgagga 30966124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 424
Target Start/End: Complemental strand, 294494 - 294456
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaatcttacaaaa 424  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  294494 tcttaaaatttgggttggacctaactcaatcctacaaaa 294456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 3183854 - 3183953
Alignment:
Q  340 caatgctggaagcccaacaacaagtctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtg 439  Q
    |||||| ||||||||||||| |  |||| |||||||||||| ||||| || |||||||    ||||||||||||   |||||||||  ||| ||||||||    
T  3183854 caatgcaggaagcccaacaatagatctacgataggctctgataccatgttgaaatttg----gggcctaactcatcgttacaaaaccggcttgtaaggtg 3183949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 3184002 - 3184072
Alignment:
Q  199 atccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||| ||| |  ||||||||||||||||||| ||| ||||| ||||| || ||||| |||||||||    
T  3184002 atccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaaccaaaggccgcaatt 3184072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 430
Target Start/End: Original strand, 10025369 - 10025427
Alignment:
Q  372 aggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagct 430  Q
    ||||||||| || ||||||||||||  ||| |||||||||| ||| |||||||||||||    
T  10025369 aggctctgatacaatcttaaaatttaagtttggcctaactccatcctacaaaactagct 10025427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 18900826 - 18900864
Alignment:
Q  192 ggactaaatccaccccttcacactcaacacaatgaaggt 230  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  18900826 ggactaaatccaccccttcacactcaacatagtgaaggt 18900864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 368 - 442
Target Start/End: Complemental strand, 30590585 - 30590511
Alignment:
Q  368 ggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagg 442  Q
    ||||||||| ||| ||||| ||| |||||||| | ||||||| |||| ||||||||||  ||| |||||||||||    
T  30590585 ggataggctttgataccatattagaatttgggctaggcctaagtcaaccttacaaaaccggcttgtaaggtgagg 30590511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 36997184 - 36997126
Alignment:
Q  186 aatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||| |||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  36997184 aatgtgggactaattccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 36997126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 446
Target Start/End: Complemental strand, 39125029 - 39124983
Alignment:
Q  400 ttgggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    |||||||||||||| |||||||||||| ||| ||||| |||||||||    
T  39125029 ttgggcctaactcattcttacaaaactggcttgtaagatgaggagtg 39124983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 45031151 - 45031209
Alignment:
Q  386 tcttaaaattt-gggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    ||||||||||| |||||||||||||||||| ||||||||||  ||| | ||||||||||    
T  45031151 tcttaaaattttgggttgggcctaactcaaccttacaaaaccggcttgaaaggtgagga 45031209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 18905873 - 18905816
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |  ||||||||| ||||||||| ||| |||||    
T  18905873 atgtgggactaaatccaccccctcaaagccaacacaataaaggtgttggaggctgcaa 18905816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 446
Target Start/End: Original strand, 23027796 - 23027873
Alignment:
Q  364 tctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    ||||||||||||||||| ||||| ||||| ||||||    |||||||||| ||||| |||||  ||| |||||||||||||||    
T  23027796 tctaggataggctctgataccatgttaaa-tttggg----gcctaactcattcttaaaaaaccggcttgtaaggtgaggagtg 23027873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 445
Target Start/End: Original strand, 29053707 - 29053788
Alignment:
Q  364 tctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgaggagt 445  Q
    ||||||||| ||||| | ||||||||| ||||| |||||    |||||||| |||||||||||| || ||||||||| ||||    
T  29053707 tctaggataagctctaataccatcttagaatttcggttgaatttaactcaaccttacaaaactaacttgtaaggtgatgagt 29053788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 45031369 - 45031418
Alignment:
Q  394 tttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    ||||||||||||||||| ||| ||||||||||  ||| ||||||||||||    
T  45031369 tttgggttgggcctaacacaaccttacaaaaccggcttgtaaggtgagga 45031418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 425
Target Start/End: Complemental strand, 10368725 - 10368685
Alignment:
Q  385 atcttaaaatttgggttgggcctaactcaatcttacaaaac 425  Q
    |||||||||||||||||||| ||||||||| | ||||||||    
T  10368725 atcttaaaatttgggttgggactaactcaaccctacaaaac 10368685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 443
Target Start/End: Original strand, 10615141 - 10615213
Alignment:
Q  372 aggctctgacaccatctta-aaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    ||||||||||||||||||| |||||  |||||||| |||| ||| |  |||||||||||| || |||||||||    
T  10615141 aggctctgacaccatcttagaaattgtggttgggcttaacgcaaccccacaaaactagcttgttaggtgagga 10615213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 27402413 - 27402457
Alignment:
Q  402 gggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    ||||||||||||  |||| |||||||||| |||||||||||||||    
T  27402413 gggcctaactcatccttataaaactagcttgtaaggtgaggagtg 27402457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 382 - 442
Target Start/End: Original strand, 30014321 - 30014380
Alignment:
Q  382 accatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagg 442  Q
    ||||||||||||||||||||| | ||||||||| ||||| |||| || | |||||||||||    
T  30014321 accatcttaaaatttgggttgag-ctaactcaaccttacgaaaccaggttgtaaggtgagg 30014380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 4e-33; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 117 - 279
Target Start/End: Complemental strand, 48046445 - 48046281
Alignment:
Q  117 ttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccacccc-ttcacac 214  Q
    |||||||||||||||||| |||||||||  |||||||||| ||| ||| |||| || |||||||||||| |||||||||||||||||||||| |||||||    
T  48046445 ttacaaaaccggcttgtaaggtgagggcggcccaaactttgtaaacactacacatgccatatctctaggcaatgtgggactaaatccacccctttcacac 48046346  T
Q  215 tcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctag 279  Q
     ||||| | ||||||||||| ||||||||| ||||| ||||| |||||  ||||||  |||||||    
T  48046345 ccaacatagtgaaggtgttggaggttgcaatgaaggcaaccccaatgctacaattaggcggctag 48046281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 116 - 281
Target Start/End: Original strand, 30490969 - 30491132
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgtcatatctctaggaaatgtgggactaaatccaccccttcacact 215  Q
    ||||| ||| ||||||||| |||||||| |||||| ||||||||| ||| |||  | ||||| |||||| ||||||| |||||||||||||||||||||     
T  30490969 cttacgaaaacggcttgtaaggtgaggggttcccagactttataaacaccacag-gccatatatctaggcaatgtgg-actaaatccaccccttcacacc 30491066  T
Q  216 caacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctaggg 281  Q
    ||||||| ||||||||||| ||| ||||| ||||| ||||||  ||| |||||||  |||||||||    
T  30491067 caacacattgaaggtgttggaggctgcaatgaaggcaacccaggtgctgcaattaggcggctaggg 30491132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 26942679 - 26942757
Alignment:
Q  192 ggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    ||||||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||  ||||||||| |||||||||    
T  26942679 ggactaaatccaccccttcacacccaacacaatgaatgtgttggaggttgcaatgaagacaacccaaataccgcaatta 26942757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 173 - 281
Target Start/End: Complemental strand, 22870684 - 22870576
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattaca 272  Q
    |||||||||| | ||||||||||||||||||| |||||| |||| |||||||||| |||||| ||||||||| ||| | |||||| |||  |||||||      
T  22870684 catatctctaagcaatgtgggactaaatccacaccttcaaactctacacaatgaatgtgttgaaggttgcaatgaaagcaacccagatggtgcaattagg 22870585  T
Q  273 cggctaggg 281  Q
    |||||||||    
T  22870584 cggctaggg 22870576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 54595147 - 54595231
Alignment:
Q  186 aatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||||||||||| |||||||||||||||| |  |||||||||||||||| ||||||||| ||||| |||  ||||||||||||||    
T  54595147 aatgtgggactatatccaccccttcacaccccgcacaatgaaggtgttggaggttgcaatgaaggcaacttaaatgccgcaatta 54595231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 121 - 295
Target Start/End: Original strand, 52043098 - 52043273
Alignment:
Q  121 aaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactg-tcatatctctaggaaatgtgggactaaatccaccccttcacactcaac 219  Q
    |||||||||||||| |||||||||| |  || |||||||| ||| | || |  ||||||| | || |||||| |||||||||||||||||||||| | |     
T  52043098 aaaaccggcttgtaaggtgagggctgcataagctttataaacactaaacagaccatatcttttggcaatgtgagactaaatccaccccttcacacccgat 52043197  T
Q  220 acaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctagggtcagattgcaatga 295  Q
    ||||||||||||||| ||| ||||| ||||  ||| ||||| |||||||||   || ||||| |||| ||||||||    
T  52043198 acaatgaaggtgttggaggctgcaatgaagacaacacaaattccgcaattaggtggttaggggcagactgcaatga 52043273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 53738295 - 53738377
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| ||||| || ||||| |||||||||    
T  53738295 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaaccaaaggccgcaatt 53738377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 3137707 - 3137783
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    |||||||||||| ||||| ||||||||||||||  ||||||| ||||||||||||||||||| ||| ||||| |||||    
T  3137707 catatctctagggaatgtcggactaaatccaccaattcacac-caacacaatgaaggtgttgcaggctgcaatgaagg 3137783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 425
Target Start/End: Complemental strand, 17912878 - 17912821
Alignment:
Q  368 ggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaac 425  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||| | ||||||||    
T  17912878 ggataggctctcataccatcttaaaatttgggttgggcctaactcaaccctacaaaac 17912821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 260
Target Start/End: Original strand, 23311485 - 23311629
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    ||||||||||||||||||| ||| | |||| ||||  |||||||| ||| |||| || ||||||||||   ||||| |||||||||||||||||||| ||    
T  23311485 cttacaaaaccggcttgtaaggtaaaggctgcccacgctttataaacactacacatgccatatctctaaacaatgtaggactaaatccaccccttcaaac 23311584  T
Q  215 tcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaat 260  Q
     |||||| |  ||||||||| ||| ||||| ||||| || ||||||    
T  23311585 ccaacac-acaaaggtgttggaggctgcaaagaaggcaaaccaaat 23311629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 46332622 - 46332703
Alignment:
Q  189 gtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    ||||||||||||||||||||| | || |||  ||||||| |||||| ||| ||||| ||||| |||||||||||||||||||    
T  46332622 gtgggactaaatccaccccttaaaacccaatccaatgaacgtgttgaaggctgcaatgaaggcaacccaaatgccgcaatta 46332703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 15665170 - 15665087
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg-taacccaaatgccgcaatt 269  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| ||||| ||||||||| | |||||||    
T  15665170 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaacccaaaggtcgcaatt 15665087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 36558553 - 36558636
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    ||||||||||||||||||||| ||| |  ||||||| ||||||||||| ||||||| | ||||| || ||||| ||||||||||    
T  36558553 atgtgggactaaatccaccccctcaaagccaacacagtgaaggtgttggaggttgctatgaaggcaaaccaaaggccgcaatta 36558636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 423
Target Start/End: Original strand, 49190160 - 49190215
Alignment:
Q  368 ggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaa 423  Q
    ||||||||||||| ||||||||| ||||||||||| ||| ||||||||||||||||    
T  49190160 ggataggctctgataccatcttagaatttgggttgagccaaactcaatcttacaaa 49190215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 281
Target Start/End: Original strand, 26942464 - 26942553
Alignment:
Q  192 ggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctaggg 281  Q
    |||| ||||||||||||||| || |||||||||||| |||||| ||||||||| ||||  ||||||||| ||  |||||  |||||||||    
T  26942464 ggacaaaatccaccccttcatacccaacacaatgaatgtgttggaggttgcaatgaagacaacccaaataccctaattaggcggctaggg 26942553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 24001599 - 24001527
Alignment:
Q  368 ggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtga 440  Q
    |||||| |||||| || |||||| |||||||||||||| |||||||| |||||||||||  ||||| ||||||    
T  24001599 ggatagactctgatactatcttagaatttgggttgggcttaactcaaccttacaaaactgtctagtgaggtga 24001527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 26942591 - 26942647
Alignment:
Q  324 gagcctgaaatgtgggcaatgctggaagcccaacaacaagtctaggataggctctga 380  Q
    ||||||||| ||||| |||||| ||||||| |||||||| |||||||||||||||||    
T  26942591 gagcctgaagtgtggacaatgcaggaagccaaacaacaaatctaggataggctctga 26942647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 45427339 - 45427411
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg-taacccaa 258  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| ||||| ||||||||    
T  45427339 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaacccaa 45427411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 29669765 - 29669847
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||||||||||||||||||||| || |  ||||||||||||||||||| ||| ||||| |||||  | ||||| ||||||||||    
T  29669765 atgtgggactaaatccacccct-caaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggccgcaatta 29669847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 29734578 - 29734515
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    |||||||||||||| |||||| ||| | |||||||||||||||||||| ||| ||||| |||||    
T  29734578 atgtgggactaaattcaccccctcaaagtcaacacaatgaaggtgttggaggctgcaatgaagg 29734515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 342 - 446
Target Start/End: Original strand, 45427197 - 45427297
Alignment:
Q  342 atgctggaagcccaacaacaagtctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgag 441  Q
    |||| ||||||||||| | |  ||||||||||||||||| ||||| || |||||||    ||||||||||||  ||||||||||  ||| ||||||||||    
T  45427197 atgcgggaagcccaacgatagatctaggataggctctgataccatgttgaaatttg----gggcctaactcatccttacaaaaccggcttgtaaggtgag 45427292  T
Q  442 gagtg 446  Q
    |||||    
T  45427293 gagtg 45427297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 384 - 443
Target Start/End: Complemental strand, 46676739 - 46676680
Alignment:
Q  384 catcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    |||||||||||||||||||| |||||||||| | |||||||| | || ||||||||||||    
T  46676739 catcttaaaatttgggttggacctaactcaaccctacaaaaccatcttgtaaggtgagga 46676680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 43972054 - 43971984
Alignment:
Q  189 gtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaa 259  Q
    ||||||||||||||||||| | | |  ||||||||||||||||||| ||| ||||| |||||||| |||||    
T  43972054 gtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggtaaaccaaa 43971984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 43972372 - 43972290
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    |||||||||||||| |||||| ||| |  ||||||||||||||||||| ||| ||||| ||||| ||  |||| |||||||||    
T  43972372 atgtgggactaaattcaccccctcaaaaccaacacaatgaaggtgttggaggctgcaatgaaggcaaatcaaaggccgcaatt 43972290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 442
Target Start/End: Original strand, 54595326 - 54595418
Alignment:
Q  353 ccaacaacaagtctaggataggctctgacaccatctt---aaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagg 442  Q
    |||||||||| ||||||||||||||| | ||||||||    || |||||||||||| |||||||| ||  ||||||| ||| |||||||||||    
T  54595326 ccaacaacaaatctaggataggctctaataccatcttttataattttgggttgggcttaactcaacctcgcaaaacttgcttgtaaggtgagg 54595418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 991221 - 991164
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  991221 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 991164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 369 - 425
Target Start/End: Complemental strand, 22572492 - 22572435
Alignment:
Q  369 gataggctctgacaccatcttaaaatttgggttgggcctaactcaa-tcttacaaaac 425  Q
    |||||||||||| | ||||||||| |||||||||| |||||||||| |||||||||||    
T  22572492 gataggctctgatatcatcttaaattttgggttggtcctaactcaactcttacaaaac 22572435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 50858029 - 50857972
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  50858029 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 50857972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 50858345 - 50858288
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  50858345 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 50858288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 53740199 - 53740142
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  53740199 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 53740142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 29669450 - 29669512
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    |||||||||||||||||||||| || |  ||||||||||||||||||| ||| ||||| |||||    
T  29669450 atgtgggactaaatccacccct-caaagccaacacaatgaaggtgttggaggctgcaatgaagg 29669512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 446
Target Start/End: Original strand, 29669623 - 29669723
Alignment:
Q  342 atgctggaagcccaacaacaagtctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgag 441  Q
    |||| ||||||||||||| |  ||||||||||||||||| ||||| || |||||||    |||  |||||||  ||||||||||  ||| ||||||||||    
T  29669623 atgcgggaagcccaacaatagatctaggataggctctgataccatgttgaaatttg----gggtttaactcatccttacaaaaccggcttgtaaggtgag 29669718  T
Q  442 gagtg 446  Q
    |||||    
T  29669719 gagtg 29669723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 437
Target Start/End: Original strand, 39778351 - 39778422
Alignment:
Q  368 ggataggctctgacaccatcttaaaattt-gggttgggcctaactcaa-tcttacaaaactagctagtaagg 437  Q
    ||||| ||||||| |||| |||||||||| ||||||||||||||||||  |||||||||| |||| ||||||    
T  39778351 ggatatgctctgataccagcttaaaattttgggttgggcctaactcaacccttacaaaaccagcttgtaagg 39778422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 54595404 - 54595511
Alignment:
Q  128 gcttgtatggtgagggcttcccaaactttataagcacaacact-gtcatatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatga 226  Q
    ||||||| |||||||||| ||| | ||||| |||||| ||||  | | | |||||||| || |||||| ||| |||| |||||||||  |||||||||||    
T  54595404 gcttgtaaggtgagggctgcccgagctttaaaagcactacacaagccgtgtctctaggcaacgtgggattaattccatcccttcacaaccaacacaatga 54595503  T
Q  227 aggtgttg 234  Q
    ||||||||    
T  54595504 aggtgttg 54595511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 3137021 - 3137107
Alignment:
Q  177 tctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgcc 263  Q
    |||||||| ||||||||||||||||||||| |||  || || |||||||| | ||||| ||| | ||| ||||| |||| |||||||    
T  3137021 tctctaggcaatgtgggactaaatccacccattcgaacccagcacaatgaggatgttggaggctacaatgaaggcaacctaaatgcc 3137107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 347 - 425
Target Start/End: Original strand, 3137426 - 3137504
Alignment:
Q  347 ggaagcccaacaacaagtctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaac 425  Q
    |||||| ||||||||  | ||||||||||||| | || |||||  |||||||||||||||||| |||| |||| |||||    
T  3137426 ggaagctcaacaacagatttaggataggctctaatactatcttggaatttgggttgggcctaaatcaaccttaaaaaac 3137504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 21210267 - 21210213
Alignment:
Q  388 ttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagg 442  Q
    |||||||||| |||||||||||||||| | |||||||| |||| ||| |||||||    
T  21210267 ttaaaatttgagttgggcctaactcaaacctacaaaaccagcttgtacggtgagg 21210213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 442
Target Start/End: Original strand, 37130067 - 37130109
Alignment:
Q  400 ttgggcctaactcaatcttacaaaactagctagtaaggtgagg 442  Q
    |||||||||||||| |||||||||||||||| |||| ||||||    
T  37130067 ttgggcctaactcattcttacaaaactagctggtaaagtgagg 37130109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 48843108 - 48843186
Alignment:
Q  191 gggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||||||| ||| |  ||||| ||||||||||||| ||| ||||| ||||| ||  |||| |||||||||    
T  48843108 gggactaaatccaccccctcagagccaacaaaatgaaggtgttgaaggctgcaatgaaggaaaatcaaaggccgcaatt 48843186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 50816501 - 50816559
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaatc-ttacaaaactagctagtaaggtgagga 443  Q
    ||||||||||||| | |||| |||||||||| ||||||||| |||| ||||||||||||    
T  50816501 tcttaaaatttggatagggcttaactcaatccttacaaaaccagcttgtaaggtgagga 50816559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 52214633 - 52214575
Alignment:
Q  186 aatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||| |||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  52214633 aatgtgggactaattccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 52214575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 56501499 - 56501557
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaa-tcttacaaaactagctagtaaggtgagga 443  Q
    ||||| ||| ||||||||||||||||||| ||||||||||| |||| ||||| ||||||    
T  56501499 tcttataatctgggttgggcctaactcaactcttacaaaaccagctggtaagatgagga 56501557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 265
Target Start/End: Complemental strand, 56509626 - 56509548
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgc 265  Q
    |||| |||||||||||||||| ||| |  ||||||||||||||||||| | | ||||| ||||| || ||||| |||||    
T  56509626 atgtaggactaaatccaccccctcaaagccaacacaatgaaggtgttggaagctgcaatgaaggcaaaccaaaggccgc 56509548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 990564 - 990507
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    |||||||||||||| |||||| ||| |  ||||||||||||||||||| ||| |||||    
T  990564 atgtgggactaaattcaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 990507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 7546631 - 7546583
Alignment:
Q  394 tttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    |||||||||||| |||||| ||| ||||||||||||| ||||||||||||    
T  7546631 tttgggttgggc-taactcgatcctacaaaactagcttgtaaggtgagga 7546583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 45427023 - 45427080
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||| ||||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  45427023 atgtggggctaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 45427080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 425
Target Start/End: Original strand, 50830708 - 50830741
Alignment:
Q  392 aatttgggttgggcctaactcaatcttacaaaac 425  Q
    ||||||||||||||||||||||| ||||||||||    
T  50830708 aatttgggttgggcctaactcaaccttacaaaac 50830741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 446
Target Start/End: Complemental strand, 51469618 - 51469540
Alignment:
Q  364 tctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    ||||||||||||||||| ||||| || |||||||    ||||||||||||  |||||| |||  ||| |||||||||||||||    
T  51469618 tctaggataggctctgataccatgttgaaatttg----gggcctaactcatccttacacaaccggcttgtaaggtgaggagtg 51469540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 991050 - 990998
Alignment:
Q  192 ggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    |||||||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  991050 ggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 990998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 416
Target Start/End: Complemental strand, 2637736 - 2637692
Alignment:
Q  372 aggctctgacaccatcttaaaatttgggttgggcctaactcaatc 416  Q
    ||||| ||| ||||||||||||||||| ||||| |||||||||||    
T  2637736 aggctttgataccatcttaaaatttggattgggtctaactcaatc 2637692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 442
Target Start/End: Original strand, 30490939 - 30490995
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagg 442  Q
    ||||| ||||||||||||||||||||||| ||||| |||   ||| |||||||||||    
T  30490939 tcttagaatttgggttgggcctaactcaaccttacgaaaacggcttgtaaggtgagg 30490995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 382 - 414
Target Start/End: Original strand, 50816707 - 50816739
Alignment:
Q  382 accatcttaaaatttgggttgggcctaactcaa 414  Q
    ||||||| |||||||||||||||||||||||||    
T  50816707 accatctcaaaatttgggttgggcctaactcaa 50816739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 2e-32; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 112 - 270
Target Start/End: Original strand, 34626785 - 34626944
Alignment:
Q  112 taatcttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttc 210  Q
    |||||||||| || ||||||||| |||||||||| ||||| |||||||| ||| |||| || ||||||||| ||||||||| |||||||||||| |||||    
T  34626785 taatcttacagaatcggcttgtaaggtgagggctgcccaagctttataaacactacacatgccatatctctgggaaatgtgagactaaatccactccttc 34626884  T
Q  211 acactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||| ||||| ||||||||||||| ||| ||||| ||||| |||| | |||| |||||||    
T  34626885 acacccaacagaatgaaggtgttggaggctgcaatgaaggcaaccaagatgctgcaatta 34626944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 116 - 267
Target Start/End: Complemental strand, 12410495 - 12410342
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgtc-atatctctaggaaa-tgtgggactaaatccaccccttcaca 213  Q
    |||||||||||   ||||| ||||| |||| |||||||||||||||||| |||  | | ||||||||| |||| |||||||||||||| || ||||||||    
T  12410495 cttacaaaaccactttgtaaggtgaaggctgcccaaactttataagcactacataggccatatctctatgaaaatgtgggactaaatcaactccttcaca 12410396  T
Q  214 ctcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaa 267  Q
    | |||||| |||||||||||| ||| |||||| |||||||||||||||||||||    
T  12410395 cccaacacgatgaaggtgttggaggctgcaacaaaggtaacccaaatgccgcaa 12410342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 171 - 281
Target Start/End: Complemental strand, 18998744 - 18998634
Alignment:
Q  171 gtcatatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||||  ||||||||||  || ||||| ||||  ||||||||| ||||||||     
T  18998744 gtcatatctctaggcaatgtgggactaaatccaccctttcacacccaacacatcgaaggtgttggtggctgcaatgaagaaaacccaaattccgcaattt 18998645  T
Q  271 cacggctaggg 281  Q
     ||||||||||    
T  18998644 gacggctaggg 18998634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 172 - 281
Target Start/End: Original strand, 5087830 - 5087939
Alignment:
Q  172 tcatatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattac 271  Q
    ||||||||||| | |||| |||||| |||||||||||| | | ||| |||||||||||||||| ||||||||| ||||| ||||||||| || ||||||     
T  5087830 tcatatctctaagcaatgagggactgaatccaccccttaatattcagcacaatgaaggtgttggaggttgcaatgaaggaaacccaaataccacaattag 5087929  T
Q  272 acggctaggg 281  Q
    ||||||||||    
T  5087930 acggctaggg 5087939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 173 - 286
Target Start/End: Original strand, 19811084 - 19811197
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattaca 272  Q
    |||||||||||| || ||||||||||||||||  |||||||| |||||||| ||||| |||| ||| ||||| ||||| |||||||||||| ||||||      
T  19811084 catatctctaggcaacgtgggactaaatccacatcttcacacccaacacaacgaaggagttggaggctgcaatgaaggcaacccaaatgccacaattagg 19811183  T
Q  273 cggctagggtcaga 286  Q
    ||||||||| ||||    
T  19811184 cggctaggggcaga 19811197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 116 - 280
Target Start/End: Original strand, 41590244 - 41590407
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgtc-atatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    ||||||||||| ||||||| | |||||| |  |||| |||||||| ||| |||| | | |||| |||||||||||||| |||||| ||||||||||||||    
T  41590244 cttacaaaaccagcttgtaagatgagggttgaccaagctttataa-cactacacagaccatatttctaggaaatgtggaactaaacccaccccttcacac 41590342  T
Q  215 tcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctagg 280  Q
     | ||||||||||||||||| ||| ||||| ||||| ||||| ||| |||||||||  ||||||||    
T  41590343 ccgacacaatgaaggtgttggaggctgcaatgaaggcaaccc-aattccgcaattaggcggctagg 41590407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 173 - 281
Target Start/End: Complemental strand, 51515746 - 51515637
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccacccctt-cacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattac 271  Q
    |||||||||||| ||||| |||||||||||||||||| ||||| ||||||||||||||||||| |||  |||| ||||| || ||||||||| ||||||     
T  51515746 catatctctaggtaatgtcggactaaatccacccctttcacacccaacacaatgaaggtgttggaggcagcaatgaaggcaatccaaatgccacaattag 51515647  T
Q  272 acggctaggg 281  Q
     |||||||||    
T  51515646 gcggctaggg 51515637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 6868164 - 6868067
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||||||||| | |||||||||||||||||||||||||| || ||||| ||||||||||||| ||| ||||  || || ||||||||||| |||||||    
T  6868164 catatctctaagtaatgtgggactaaatccaccccttcaaacccaacaaaatgaaggtgttggaggctgcagtgagggcaacccaaatgctgcaatta 6868067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 19810771 - 19810867
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||||||||||| ||||||||||||  | |||||||||||||  |||||||||||||||||  ||||||||| ||||  |||||||||||||||||||    
T  19810771 catatctctaggcaatgtgggactag-tgcaccccttcacacctaacacaatgaaggtgttcgaggttgcaatgaagccaacccaaatgccgcaatta 19810867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 4022212 - 4022294
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||||||| ||||||| || ||||| |||||||||    
T  4022212 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggttgcgacgaaggcaaaccaaaggccgcaatt 4022294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 7907896 - 7908026
Alignment:
Q  153 ctttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccacccc-ttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    |||||||| ||| |||| || |||||||||  |||||||||||||||||||||||| ||||||| ||||||||||||  ||  | ||| ||||| |||||    
T  7907896 ctttataaacactacacatgccatatctctgagaaatgtgggactaaatccacccctttcacacccaacacaatgaaactgccggaggatgcaatgaagg 7907995  T
Q  251 taacccaaatgccgcaattacacggctaggg 281  Q
     |||||||||||| ||||||  |||||||||    
T  7907996 caacccaaatgccacaattaggcggctaggg 7908026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 40566284 - 40566434
Alignment:
Q  119 acaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgtc-atatctctaggaaatgtgggactaaatccaccccttcacactca 217  Q
    ||||||||| |||||| | |||||||||||||   ||| ||| ||| |||| | | ||||| ||||| ||| ||||||| |||||| |||||||||| ||    
T  40566284 acaaaaccgacttgtaagttgagggcttcccacgttttgtaaacactacacaggccatatcgctaggcaatatgggactgaatccatcccttcacaccca 40566383  T
Q  218 acacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaat 268  Q
    ||||||||||||||||| | | || || ||||| ||||||| |||||||||    
T  40566384 acacaatgaaggtgttggaagctgtaatgaaggcaacccaactgccgcaat 40566434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 324 - 425
Target Start/End: Original strand, 19810934 - 19811035
Alignment:
Q  324 gagcctgaaatgtgggcaatgctggaagcccaacaacaagtctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaa 423  Q
    |||||||||  |||| | |||| ||||||||  |||||  |||||||||| |||||| |||||||||||||||||||| ||||||| |||| ||||||||    
T  19810934 gagcctgaagcgtggacgatgcgggaagccctgcaacagatctaggatagtctctgataccatcttaaaatttgggttcggcctaagtcaaccttacaaa 19811033  T
Q  424 ac 425  Q
    ||    
T  19811034 ac 19811035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 51188887 - 51188948
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttg 234  Q
    |||||||||| | |||||||||||||||||||||||||| || |||||||||||||||||||    
T  51188887 catatctctaagcaatgtgggactaaatccaccccttcaaacccaacacaatgaaggtgttg 51188948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 295
Target Start/End: Original strand, 33248409 - 33248525
Alignment:
Q  179 tctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggcta 278  Q
    |||||| |||||| |||||||||||||| || |||| ||||||||||||||||||| || ||||||  || | ||||| |||||||||||||  | ||||    
T  33248409 tctaggcaatgtgagactaaatccacccgttaacacccaacacaatgaaggtgttggagattgcaattaatgcaacccgaatgccgcaattaggcagcta 33248508  T
Q  279 gggtcagattgcaatga 295  Q
    ||| | || ||||||||    
T  33248509 ggggcggactgcaatga 33248525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 295
Target Start/End: Original strand, 33268581 - 33268697
Alignment:
Q  179 tctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggcta 278  Q
    |||||| |||||| |||||||||||||| || |||| ||||||||||||||||||| || ||||||  || | ||||| |||||||||||||  | ||||    
T  33268581 tctaggcaatgtgagactaaatccacccgttaacacccaacacaatgaaggtgttggagattgcaattaatgcaacccgaatgccgcaattaggcagcta 33268680  T
Q  279 gggtcagattgcaatga 295  Q
    ||| | || ||||||||    
T  33268681 ggggcggactgcaatga 33268697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 41590603 - 41590663
Alignment:
Q  171 gtcatatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtg 231  Q
    |||||||||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||    
T  41590603 gtcatatctctaggcaatgtgggactaaattcaccccctcacacccaacacaatgaaggtg 41590663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 348 - 443
Target Start/End: Complemental strand, 40571683 - 40571589
Alignment:
Q  348 gaagcccaacaacaagtctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    ||||||||||||||  || ||||||| || ||| ||||||||||| ||||| ||||||||||||||| |||||||||| | || ||||||||||||    
T  40571683 gaagcccaacaacagatcaaggatagactttgataccatcttaaa-tttggattgggcctaactcaaccttacaaaaccaacttgtaaggtgagga 40571589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 45264678 - 45264598
Alignment:
Q  189 gtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| ||||| || ||||| |||||||||    
T  45264678 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaaagaaggcaaaccaaaggccgcaatt 45264598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 281
Target Start/End: Original strand, 12581378 - 12581525
Alignment:
Q  136 ggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccacccctt-cacactcaacacaatgaaggtgtt 233  Q
    |||||||||| ||||  |||||||| ||| | || || ||||||| | || || |||||||||||||||||| || ||||| ||||||||||||||||||    
T  12581378 ggtgagggctgcccatgctttataaacactaaacatgccatatctttgggcaacgtgggactaaatccacccatttcacacccaacacaatgaaggtgtt 12581477  T
Q  234 gtaggttgcaacgaaggtaacccaaatgccgcaattacacggctaggg 281  Q
    | | | || ||| |||| ||||||||||||| | |||  |||||||||    
T  12581478 ggaagctgaaacaaaggcaacccaaatgccggacttaggcggctaggg 12581525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 267
Target Start/End: Complemental strand, 19459739 - 19459660
Alignment:
Q  188 tgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaa 267  Q
    |||||||||||| ||||||| |||||| |||||||||||||| |||| ||| |||||   ||| ||||||||||||||||    
T  19459739 tgtgggactaaacccaccccctcacacccaacacaatgaaggagttggaggctgcaatttaggcaacccaaatgccgcaa 19459660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 121 - 270
Target Start/End: Complemental strand, 18998477 - 18998327
Alignment:
Q  121 aaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgtca-tatctctaggaaatgtgggactaaatccaccccttcacactcaac 219  Q
    |||||||||||||| |||||||||| | ||| |||||||| ||| |||    || |||||||||| |||||| |||||| ||  ||||||||||| ||||    
T  18998477 aaaaccggcttgtaaggtgagggctgctcaagctttataaacactacaaaagcaatatctctaggcaatgtgagactaagtctgccccttcacacccaac 18998378  T
Q  220 acaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||||||| ||  || ||| |   | ||| |||||||||||||||||||||    
T  18998377 acaatgaatgtcatggaggctttcatgaatgtaacccaaatgccgcaatta 18998327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 368 - 442
Target Start/End: Original strand, 40188674 - 40188748
Alignment:
Q  368 ggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagg 442  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||   | |||||| |||| |||||||||||    
T  40188674 ggataggctctgacaccatcttaaaatttgggttggcactaacttaactctgcaaaacaagcttgtaaggtgagg 40188748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 364 - 442
Target Start/End: Original strand, 41590503 - 41590580
Alignment:
Q  364 tctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagg 442  Q
    ||||||||||||||||| ||||||||| |||||||||| |||||||||||| ||||| ||||  ||| ||||| |||||    
T  41590503 tctaggataggctctgataccatcttagaatttgggtt-ggcctaactcaaccttacgaaaccggcttgtaagatgagg 41590580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 10239549 - 10239493
Alignment:
Q  387 cttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    ||||||| |||||||||||||||||||| ||||||||||| ||| ||||| ||||||    
T  10239549 cttaaaacttgggttgggcctaactcaaccttacaaaactggcttgtaagctgagga 10239493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 13978616 - 13978520
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||| |||||  ||||||||||||||  || |||||||||| |||||||||||| || ||| ||| ||||| ||||| ||| |||||| |||||||    
T  13978616 catatatctagacaatgtgggactaaagacatcccttcacacccaacacaatgaacgtattggaggatgcaatgaaggcaacacaaatgtcgcaatt 13978520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 442
Target Start/End: Original strand, 17557708 - 17557764
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagg 442  Q
    ||||| ||||||||||||||||||||||| |||||||||  |||| |||||||||||    
T  17557708 tcttagaatttgggttgggcctaactcaaccttacaaaatcagcttgtaaggtgagg 17557764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 17557738 - 17557829
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgtcatatctctaggaaatgtgggactaaatccacccct 208  Q
    ||||||||| | ||||||| |||||||| | || || |||||||| ||| |||| |||||||||||||| ||||||||| ||||| |||||||    
T  17557738 cttacaaaatcagcttgtaaggtgagggttgcctaagctttataaacactacac-gtcatatctctaggcaatgtgggattaaattcacccct 17557829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 425
Target Start/End: Original strand, 21641405 - 21641444
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaatcttacaaaac 425  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  21641405 tcttaaaatttgggttgggcctaactcaaccttacaaaac 21641444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 31305728 - 31305665
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  31305728 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 31305665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 19809973 - 19810070
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgtc-atatctctaggaaatgtgggactaaatccaccccttcaca 213  Q
    ||||||||| ||||||||| ||||| |||| ||||| |||||||| ||  |||| | | |||| |||||| ||||||||||| ||||||||||||||||    
T  19809973 cttacaaaatcggcttgtaaggtgaaggctgcccaagctttataaacattacacagaccatatatctaggcaatgtgggact-aatccaccccttcaca 19810070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 33879865 - 33879947
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||||||||||  ||| |  ||||||||||||||||||| ||| ||||| ||||| || ||||| | |||||||    
T  33879865 atgtgggactaaatccaccctctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaaccaaaggtcgcaatt 33879947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 33964390 - 33964308
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||||||||||  ||| |  ||||||||||||||||||| ||| ||||| ||||| || ||||| | |||||||    
T  33964390 atgtgggactaaatccaccctctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaaccaaaggtcgcaatt 33964308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 392 - 441
Target Start/End: Complemental strand, 347156 - 347107
Alignment:
Q  392 aatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgag 441  Q
    |||||||||||| |||||||||| |||||||||| |||| ||||||||||    
T  347156 aatttgggttggccctaactcaaccttacaaaaccagcttgtaaggtgag 347107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 385 - 442
Target Start/End: Complemental strand, 7525107 - 7525050
Alignment:
Q  385 atcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagg 442  Q
    |||||| ||||||| ||| ||||||||||| |||||||||| |||| |||||||||||    
T  7525107 atcttagaatttggattgagcctaactcaaccttacaaaaccagcttgtaaggtgagg 7525050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 19937130 - 19937187
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  19937130 atgtgggactaaatccaccccatcaaagccaacacaatgaaggtgttggaggatgcaa 19937187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 364 - 446
Target Start/End: Complemental strand, 20735659 - 20735581
Alignment:
Q  364 tctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    ||||||||||||||||| ||||| || |||||||||    ||||||||||  ||||||||||  ||| |||||||||||||||    
T  20735659 tctaggataggctctgataccatgttgaaatttggg----gcctaactcatccttacaaaaccggcttgtaaggtgaggagtg 20735581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 25437035 - 25436982
Alignment:
Q  210 cacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgcc 263  Q
    ||||||||||| ||||| ||||||| ||| ||||| ||||||||||||||||||    
T  25437035 cacactcaacagaatgatggtgttggaggctgcaatgaaggtaacccaaatgcc 25436982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 8520180 - 8520243
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||||||||||||||||| ||| |  |||||||||||||| |||| ||| ||||| |||||    
T  8520180 atgtgggactaaatccaccccctcaaagccaacacaatgaaggggttggaggctgcaatgaagg 8520243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 20735539 - 20735476
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    |||||||| |||||||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  20735539 atgtgggattaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 20735476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 211 - 281
Target Start/End: Complemental strand, 14623200 - 14623130
Alignment:
Q  211 acactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctaggg 281  Q
    |||| ||||||||||||||||||| ||| ||||| ||||| |||||||| ||| | ||||  |||||||||    
T  14623200 acacccaacacaatgaaggtgttggaggctgcaatgaaggcaacccaaacgccaccattaggcggctaggg 14623130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 15013536 - 15013478
Alignment:
Q  193 gactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggt 251  Q
    |||||||| |||||| ||| |  ||||||||||||||||||| ||||||||| ||||||    
T  15013536 gactaaattcaccccctcaaagccaacacaatgaaggtgttggaggttgcaatgaaggt 15013478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 17419804 - 17419758
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgtt 233  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||    
T  17419804 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgtt 17419758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 424
Target Start/End: Original strand, 19809943 - 19809981
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaatcttacaaaa 424  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  19809943 tcttaaattttgggttgggcctaactcaaccttacaaaa 19809981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 424
Target Start/End: Original strand, 19810683 - 19810721
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaatcttacaaaa 424  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  19810683 tcttaaaatttgggttgggcctagctcaaccttacaaaa 19810721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 7525076 - 7525023
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac 169  Q
    ||||||||||| ||||||| |||||||||| ||||||||| |||| ||| ||||    
T  7525076 cttacaaaaccagcttgtaaggtgagggctgcccaaacttcataaacactacac 7525023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 8000545 - 8000445
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccacccc-ttcacactcaacacaatgaaggtgttgtaggttgcaacg--aaggtaacccaaatgccgcaatt 269  Q
    |||||||||| ||||||| ||| |||||||||||| || || | |||||||||||| |||  | ||| ||||| |  |||| ||||||||||||||||||    
T  8000545 catatctctatgaaatgtaggaataaatccacccctttgacgcccaacacaatgaaagtgccggaggctgcaatgaaaaggcaacccaaatgccgcaatt 8000446  T
Q  270 a 270  Q
    |    
T  8000445 a 8000445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 13031126 - 13031183
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    ||||| |||||||||||| |||||||||| | |||||||| || | ||||||||||||    
T  13031126 tcttagaatttgggttggacctaactcaaccctacaaaaccagtttgtaaggtgagga 13031183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 443
Target Start/End: Complemental strand, 13978892 - 13978831
Alignment:
Q  382 accatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    ||||||||  ||||||||||| |||||||| || |||||||||||  || ||||||||||||    
T  13978892 accatctttgaatttgggttgtgcctaacttaaccttacaaaactgacttgtaaggtgagga 13978831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 149
Target Start/End: Original strand, 19609200 - 19609233
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttccc 149  Q
    ||||||||||||||||||| ||||||||||||||    
T  19609200 cttacaaaaccggcttgtaaggtgagggcttccc 19609233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 43423296 - 43423239
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    |||||||| |||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  43423296 atgtgggaataaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 43423239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 4022126 - 4022170
Alignment:
Q  402 gggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    ||||||||||||  ||||||||||| ||| |||||||||||||||    
T  4022126 gggcctaactcatccttacaaaactggcttgtaaggtgaggagtg 4022170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 443
Target Start/End: Original strand, 17154852 - 17154892
Alignment:
Q  403 ggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    |||||||||||| ||||||||||||||| || |||||||||    
T  17154852 ggcctaactcaaccttacaaaactagcttgtgaggtgagga 17154892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 442
Target Start/End: Original strand, 19609178 - 19609226
Alignment:
Q  394 tttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagg 442  Q
    ||||||||| ||||||||||| ||||||||||  ||| |||||||||||    
T  19609178 tttgggttgagcctaactcaaccttacaaaaccggcttgtaaggtgagg 19609226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 33879779 - 33879823
Alignment:
Q  402 gggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    ||||||||||||  |||||||||| |||| |||||||||||||||    
T  33879779 gggcctaactcatccttacaaaaccagcttgtaaggtgaggagtg 33879823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 33964476 - 33964432
Alignment:
Q  402 gggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    ||||||||||||  |||||||||| |||| |||||||||||||||    
T  33964476 gggcctaactcatccttacaaaaccagcttgtaaggtgaggagtg 33964432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 35926249 - 35926293
Alignment:
Q  402 gggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    ||||||||||||  |||||||||| |||| |||||||||||||||    
T  35926249 gggcctaactcatccttacaaaaccagcttgtaaggtgaggagtg 35926293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 425
Target Start/End: Original strand, 40566046 - 40566102
Alignment:
Q  370 ataggctctgacaccatcttaaaattt-gggttgggcctaactcaatcttacaaaac 425  Q
    ||||||||||| ||||||||| ||||| ||||||||| |||| ||| ||||||||||    
T  40566046 ataggctctgataccatcttagaattttgggttgggcataacccaaccttacaaaac 40566102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 43423382 - 43423338
Alignment:
Q  402 gggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    ||||||||||||  ||||||||||| ||| |||||||||||||||    
T  43423382 gggcctaactcatccttacaaaactggcttgtaaggtgaggagtg 43423338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 4e-30; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 116 - 262
Target Start/End: Complemental strand, 51917969 - 51917822
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    |||||||||| |||||||| | |||||||  ||||| |||||||| ||| |||  || |||||||||||| ||||| ||||||||||||||| |||||||    
T  51917969 cttacaaaactggcttgtaagctgagggcggcccaagctttataaacactacatatgccatatctctaggcaatgtaggactaaatccaccctttcacac 51917870  T
Q  215 tcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgc 262  Q
    |||||| |||||||| |||| ||||||||| ||||| |||||||||||    
T  51917869 tcaacataatgaaggcgttgaaggttgcaatgaaggcaacccaaatgc 51917822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 35035186 - 35035036
Alignment:
Q  119 acaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacact-gtcatatctctaggaaatgtgggactaaatccaccccttcacactca 217  Q
    ||||||||| ||||||  | ||||||| ||||| ||||||||  | |||||  | |||||||||| |||||||| |||||| |||||||||||| ||  |    
T  35035186 acaaaaccgacttgtaaagagagggctgcccaagctttataaatagaacacaagccatatctctaagaaatgtgagactaagtccaccccttcaaaccta 35035087  T
Q  218 acacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaat 268  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||| ||||||    
T  35035086 acacaatgaaggtgttgaaggttgcaacgaaggcaactcaaatgtcgcaat 35035036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 662759 - 662660
Alignment:
Q  171 gtcatatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||||||||||| |||| ||||||||||||| ||||||||| || ||||||||| ||||||||| ||| ||||| ||||| |||||||||| ||||||||    
T  662759 gtcatatctctaagaaaagtgggactaaatcgaccccttcaaacccaacacaataaaggtgttggaggctgcaatgaaggcaacccaaatggcgcaatta 662660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 39225040 - 39225208
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgtc-atatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    ||||||| ||||| ||||| || ||| ||||||||| ||||||| |||| |||  | | ||||||||||| |||| ||||||||| |||| |||||||||    
T  39225040 cttacaagaccggtttgtaaggcgagagcttcccaatctttatatgcactacaaaggccatatctctaggcaatgcgggactaaacccacgccttcacac 39225139  T
Q  215 tcaacacaatgaaggtgt----tgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctag 279  Q
     |||||||||||||||||    || ||| ||||  ||||| |||||||||||||||||||  |||||||    
T  39225140 ccaacacaatgaaggtgtatgttggaggctgcagtgaaggcaacccaaatgccgcaattaggcggctag 39225208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 193 - 295
Target Start/End: Complemental strand, 54861536 - 54861434
Alignment:
Q  193 gactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctagggtcagattgcaa 292  Q
    |||||||||||||||||||||| |||||||| |||||||||| ||| ||||| ||||  |||||  |||||||| |||  ||||||||| |||| |||||    
T  54861536 gactaaatccaccccttcacacccaacacaacgaaggtgttggaggctgcaatgaagacaacccgtatgccgcagttaggcggctaggggcagactgcaa 54861437  T
Q  293 tga 295  Q
    |||    
T  54861436 tga 54861434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 369 - 438
Target Start/End: Complemental strand, 54861661 - 54861592
Alignment:
Q  369 gataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggt 438  Q
    |||||||||| | |||||||||||||||||||||||| |||||||| || |||||||||||| |||||||    
T  54861661 gataggctctcataccatcttaaaatttgggttgggcgtaactcaacctaacaaaactagcttgtaaggt 54861592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 230
Target Start/End: Complemental strand, 351250 - 351157
Alignment:
Q  138 tgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggt 230  Q
    |||||||| ||||  |||||||| ||| |||| ||||| |||| || | |||||||||||||| ||||||||||| ||||||||||||||||||    
T  351250 tgagggctgcccatgctttataaacactacacatgtcacatctgtaagcaatgtgggactaaagccaccccttcaaactcaacacaatgaaggt 351157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 440
Target Start/End: Complemental strand, 25568655 - 25568562
Alignment:
Q  347 ggaagcccaacaacaagtctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtga 440  Q
    |||||||||||||||| |||| |||||||||| | ||||||  | ||||||| ||||||||||||||| || || ||||  |||||||||||||    
T  25568655 ggaagcccaacaacaaatctaagataggctctaataccatcacagaatttggtttgggcctaactcaacctaacgaaaccggctagtaaggtga 25568562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 14170086 - 14170168
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||||||| ||| ||| |  |||||||||||||||| || ||| ||||| ||||| || |||||||||||||||    
T  14170086 atgtgggactaaatccagcccctcaaagccaacacaatgaaggtgatggaggctgcaatgaaggcaaaccaaatgccgcaatt 14170168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 171 - 261
Target Start/End: Complemental strand, 25568530 - 25568440
Alignment:
Q  171 gtcatatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatg 261  Q
    ||||| |||||||| |||||||  ||||| |||||||||||||| |||||||  |||||||||| ||| ||||| | ||| ||||||||||    
T  25568530 gtcatgtctctaggcaatgtggtgctaaacccaccccttcacacccaacacagagaaggtgttggaggctgcaatgtaggcaacccaaatg 25568440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 24860152 - 24860229
Alignment:
Q  192 ggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    |||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| ||||| || ||||| |||||||||    
T  24860152 ggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaaccaaaggccgcaatt 24860229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 13769377 - 13769441
Alignment:
Q  186 aatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    |||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  13769377 aatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 13769441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Complemental strand, 35018578 - 35018502
Alignment:
Q  368 ggataggctctgacaccatcttaaaatttg-ggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    ||||||||||||| | ||||||| |||||| ||||||||||||||| | |||||||| | |||| ||||||||||||    
T  35018578 ggataggctctgatatcatcttagaatttgtggttgggcctaactcgaccttacaaacccagcttgtaaggtgagga 35018502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 45443298 - 45443234
Alignment:
Q  186 aatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    |||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  45443298 aatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 45443234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 41380741 - 41380678
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  41380741 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 41380678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 43101458 - 43101521
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  43101458 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 43101521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 54369056 - 54368993
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  54369056 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 54368993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 44573343 - 44573286
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  44573343 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 44573286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 364 - 446
Target Start/End: Complemental strand, 44573776 - 44573698
Alignment:
Q  364 tctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    ||||||||||||||||| ||||| || |||||||||    ||||||||||  ||||||||||  ||| |||||||||||||||    
T  44573776 tctaggataggctctgataccatgttgaaatttggg----gcctaactcatccttacaaaaccggcttgtaaggtgaggagtg 44573698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 443
Target Start/End: Original strand, 50187399 - 50187459
Alignment:
Q  383 ccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    |||||||| |||||| |||||||||||||||| ||||| |||||  || ||||||||||||    
T  50187399 ccatcttagaatttgagttgggcctaactcaaccttactaaactgacttgtaaggtgagga 50187459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 4255527 - 4255480
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttg 234  Q
    ||||||||||||||||||||| ||| |  |||||||||||||||||||    
T  4255527 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttg 4255480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 4256251 - 4256188
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||||||||||||||||| ||| |  ||||||||| ||||||||| ||| ||||| |||||    
T  4256251 atgtgggactaaatccaccccctcaaagccaacacaataaaggtgttggaggctgcaatgaagg 4256188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 265
Target Start/End: Complemental strand, 3985790 - 3985712
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgc 265  Q
    ||||||||||||||||||||| ||| |  ||||||| ||||||||||| ||| ||| | ||||| || ||||| |||||    
T  3985790 atgtgggactaaatccaccccctcaaagccaacacagtgaaggtgttggaggctgctatgaaggcaaaccaaaggccgc 3985712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 443
Target Start/End: Complemental strand, 30327003 - 30326933
Alignment:
Q  373 ggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    |||||| | ||||||||| ||| |||||||||||||||| || || |||||||  ||| ||||||||||||    
T  30327003 ggctctaataccatcttagaatctgggttgggcctaacttaaactcacaaaaccggcttgtaaggtgagga 30326933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 53789149 - 53789095
Alignment:
Q  175 tatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaagg 229  Q
    |||||||||| ||||||  ||||||||| |||||||||||  |||||||||||||    
T  53789149 tatctctaggcaatgtgaaactaaatcctccccttcacacgtaacacaatgaagg 53789095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 27219346 - 27219289
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |  |||||| |||||||||||| ||| |||||    
T  27219346 atgtgggactaaatccaccccctcaaagccaacacgatgaaggtgttggaggctgcaa 27219289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 441
Target Start/End: Complemental strand, 49812298 - 49812221
Alignment:
Q  364 tctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgag 441  Q
    ||||||||||||||||| |  |||||| ||||| | |||||||||||||||  ||||||||   ||| ||||||||||    
T  49812298 tctaggataggctctgatattatcttagaattttgattgggcctaactcaactttacaaaatcggcttgtaaggtgag 49812221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 49812497 - 49812444
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtg 439  Q
    ||||| |||| |||| ||||||||||||| |||||||||||| || ||||||||    
T  49812497 tcttagaattcgggtcgggcctaactcaagcttacaaaactaacttgtaaggtg 49812444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 13769292 - 13769336
Alignment:
Q  402 gggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    ||||||||||||  |||||||||| |||| |||||||||||||||    
T  13769292 gggcctaactcatccttacaaaaccagcttgtaaggtgaggagtg 13769336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 21750578 - 21750534
Alignment:
Q  402 gggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    ||||||||||||  ||||||||||| ||| |||||||||||||||    
T  21750578 gggcctaactcatccttacaaaactggcttgtaaggtgaggagtg 21750534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 39225010 - 39225046
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaatcttacaa 422  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  39225010 tcttagaatttgggttgggcctaactcaaccttacaa 39225046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 6e-29; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 14595896 - 14596009
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    |||||||||||||||| || |||||||||| |||||||||||||| ||| |||| || |||||||||||| || ||||| |||||||||||||||||||     
T  14595896 cttacaaaaccggcttttaaggtgagggctgcccaaactttataaacactacacatgccatatctctaggcaacgtggggctaaatccaccccttcacag 14595995  T
Q  215 tcaacacaatgaag 228  Q
    ||||||||||||||    
T  14595996 tcaacacaatgaag 14596009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 16015424 - 16015537
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    ||||||||||| |||| || |||||||||| |||||||||||||| ||| |||| || |||||||||||| || |||||||||||||||||||||||||     
T  16015424 cttacaaaaccagcttttaaggtgagggctgcccaaactttataaacactacacatgccatatctctaggcaacgtgggactaaatccaccccttcacag 16015523  T
Q  215 tcaacacaatgaag 228  Q
    ||||||||||||||    
T  16015524 tcaacacaatgaag 16015537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 116 - 295
Target Start/End: Original strand, 39079956 - 39080137
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    |||||||||||||||||||  ||| ||||| | |||  ||||||| ||| |||| ||||||||||||||| |||||| || ||||||||||||| |||||    
T  39079956 cttacaaaaccggcttgtaaagtgggggctgcacaagttttataaacactacacatgtcatatctctaggcaatgtgagattaaatccacccctccacac 39080055  T
Q  215 tcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacac-ggctagggtcagattgcaatga 295  Q
     | | ||||||| ||||||| ||| || |||||||| |||||||||||||||||||  | |||||||| |||| ||||||||    
T  39080056 ccgatacaatgagggtgttggaggctggaacgaaggcaacccaaatgccgcaattaggcgggctaggggcagactgcaatga 39080137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 101 - 270
Target Start/End: Complemental strand, 41387636 - 41387464
Alignment:
Q  101 gttgggtctaat--aatcttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgt-catatctctaggaaatgtgggacta 197  Q
    ||||||||||||  || |||||| ||| |||||||| ||||| |||| |||||| ||||||||||| |||  || ||||| || ||| ||||||||||||    
T  41387636 gttgggtctaattaaaccttacagaacaggcttgtaaggtgaaggctacccaaattttataagcactacatagttcatatgtcaaggcaatgtgggacta 41387537  T
Q  198 aatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    || ||||||||||| ||  |||||||||||||||||| ||||||||| ||||| |||||||||| | ||||||    
T  41387536 aacccaccccttcatacctaacacaatgaaggtgttggaggttgcaatgaaggcaacccaaatgtcacaatta 41387464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 96 - 267
Target Start/End: Original strand, 30610801 - 30610973
Alignment:
Q  96 tttaggttgggtctaat--aatcttacaaaaccggctt-gtatggtgagggcttcccaaactttataagcacaacactgtcatatctctaggaaatgtgg 192  Q
    ||||||||||||||||   || ||||||||||| |||| ||| |||||||||| ||||| |||||||| ||| |    | |||||||||||| ||||||     
T  30610801 tttaggttgggtctaactcaaccttacaaaaccagctttgtaaggtgagggctgcccaagctttataaacactaag--gccatatctctaggcaatgtga 30610898  T
Q  193 gactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaa 267  Q
    || ||||||||||||||| ||| ||||||||||||||||||| ||| ||||| ||||| ||||||||||| ||||    
T  30610899 gattaaatccaccccttcccacccaacacaatgaaggtgttggaggctgcaatgaaggcaacccaaatgctgcaa 30610973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 39079868 - 39079965
Alignment:
Q  328 ctgaaatgtgggcaatgctggaagcccaacaacaagtctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaac 425  Q
    ||||| ||||| |||||| ||||||||||| |||  |||||||||||||||||  ||||||||||||||||||||||||||||| || ||||||||||    
T  39079868 ctgaagtgtggacaatgcaggaagcccaacgacagatctaggataggctctgatgccatcttaaaatttgggttgggcctaactaaaccttacaaaac 39079965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 122 - 281
Target Start/End: Original strand, 14596213 - 14596373
Alignment:
Q  122 aaaccggcttgtatggtgagggcttcccaaactttataagcacaac-actgtcatatctctaggaaatgtgggactaaatccaccccttcacactcaaca 220  Q
    ||||||||||||| |||||||||| ||||| |||| ||| ||| || |  | | |||||||||| ||||||||| ||||||  ||| |||||||  ||||    
T  14596213 aaaccggcttgtaaggtgagggctgcccaagctttctaaacactacgaaagccttatctctaggcaatgtgggaataaatctgcccattcacaccgaaca 14596312  T
Q  221 caatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctaggg 281  Q
    | |||||  ||||| |||  |||| ||||||||||||||||||||||||| ||||||||||    
T  14596313 cgatgaaaatgttggaggcagcaatgaaggtaacccaaatgccgcaattagacggctaggg 14596373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 122 - 281
Target Start/End: Original strand, 16015741 - 16015901
Alignment:
Q  122 aaaccggcttgtatggtgagggcttcccaaactttataagcacaac-actgtcatatctctaggaaatgtgggactaaatccaccccttcacactcaaca 220  Q
    |||||| |||||| |||||||||| ||||| |||| ||| ||| || |  | |||||||||||| ||||||||| ||||||  ||| |||||||  ||||    
T  16015741 aaaccgacttgtaaggtgagggctgcccaagctttctaaacactacgaaagccatatctctaggcaatgtgggaataaatctgcccattcacaccgaaca 16015840  T
Q  221 caatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctaggg 281  Q
    | |||||  ||||| ||| ||||| ||||||||||||||||||||||||| || |||||||    
T  16015841 cgatgaaaatgttggaggctgcaatgaaggtaacccaaatgccgcaattagacagctaggg 16015901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 250
Target Start/End: Complemental strand, 32000906 - 32000771
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||| ||| ||||  | |||||||||| | | |||||||||||||||| ||| ||| |     
T  32000906 cttacaaaaccggcttgtaaggtgagggctgcccaagctttataaacactacacaggacatatctctaagcattgtgggactaaatccatcccctcaaag 32000807  T
Q  215 tcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
     |||||| |||||||||||| ||| ||||| |||||    
T  32000806 ccaacaccatgaaggtgttgaaggctgcaatgaagg 32000771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 422734 - 422831
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||||||||||| ||||||||| ||||  ||||||||||||| ||||||||||||||||||| | | ||||| | ||| |||||||||||||| ||||    
T  422734 catatctctaggcaatgtgggattaaagtcaccccttcacacccaacacaatgaaggtgttggaagctgcaatggaggcaacccaaatgccgcgatta 422831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 270
Target Start/End: Complemental strand, 28359114 - 28359017
Alignment:
Q  174 atatctctaggaaatgtgggactaaatccacccctt-cacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    ||||||||||| ||||||||||| ||||||||| || ||||| ||| | ||||||||||||| ||| ||||| ||||| |||||||||||||||||||    
T  28359114 atatctctaggcaatgtgggactgaatccacccatttcacacccaaaataatgaaggtgttggaggctgcaatgaaggaaacccaaatgccgcaatta 28359017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 295
Target Start/End: Original strand, 39079724 - 39079824
Alignment:
Q  195 ctaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctagggtcagattgcaatg 294  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| ||  | ||||  ||| ||||||||||||||| | |||||||| ||||  ||||||    
T  39079724 ctaaatccaccccttcacacccaacacaatgaaggtgttggaggctgtgatgaagacaactcaaatgccgcaattagatggctaggggcagaccgcaatg 39079823  T
Q  295 a 295  Q
    |    
T  39079824 a 39079824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 41389336 - 41389276
Alignment:
Q  174 atatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttg 234  Q
    ||||||||| | |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  41389336 atatctctaagcaatgtgggactaaatccaccccttcacacctaacacaatgaaggtgttg 41389276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 270
Target Start/End: Complemental strand, 46753157 - 46753061
Alignment:
Q  174 atatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    ||||||||||| ||||| |||||||||| |||||||||||| |||||||| |||  ||||| ||| ||| | ||||| ||||||||||| |||||||    
T  46753157 atatctctaggcaatgttggactaaatctaccccttcacacccaacacaaggaacatgttggaggctgcgatgaaggcaacccaaatgcagcaatta 46753061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 12840645 - 12840742
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||||||||||| ||||||| |||||| |||||| |||| || |||||||| |||||||||| ||  ||||| |||   |||||||||||||||||||    
T  12840645 catatctctaggcaatgtggaactaaagccaccctttcaaacccaacacaacgaaggtgttggagaatgcaatgaaaacaacccaaatgccgcaatta 12840742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 462
Target Start/End: Complemental strand, 27820957 - 27820889
Alignment:
Q  394 tttgggttgggcctaactcaatcttacaaaactagctagtaaggtgaggagtgaggactgcctctactt 462  Q
    |||||||| |||||||||||| ||||||||||| ||| |||||||||| |||||| || ||||||||||    
T  27820957 tttgggttcggcctaactcaaccttacaaaactggcttgtaaggtgagaagtgagaacggcctctactt 27820889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 41710032 - 41709952
Alignment:
Q  190 tgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||||||||||||||||| ||| |  ||||||||||||||||||| ||||||||| ||||  |||| |||||| |||||||    
T  41710032 tgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggttgcaatgaagacaacctaaatgctgcaatta 41709952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 21033845 - 21033960
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaacttt-ataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttcaca 213  Q
    |||||||||  ||||| || |||||||||| ||||| |||| |||| ||| |||  || |||||||||||| |||||| |||||||| ||||||||||||    
T  21033845 cttacaaaattggcttttaaggtgagggctgcccaagcttttataaacaccacaaatgccatatctctaggcaatgtgagactaaattcaccccttcaca 21033944  T
Q  214 ctcaacacaatgaagg 229  Q
    | ||||| ||||||||    
T  21033945 cacaacataatgaagg 21033960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 279
Target Start/End: Complemental strand, 46870345 - 46870238
Alignment:
Q  173 catatctctaggaaatgtgggactaaatcca-ccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattac 271  Q
    |||||| ||||| |||||||||||||||||| ||||||||||| | | |||||||| |||||| ||| ||||| || || | ||||||||||| |||||     
T  46870345 catatccctaggcaatgtgggactaaatccacccccttcacaccctaaacaatgaaagtgttggaggctgcaaagatggcagcccaaatgccgtaattat 46870246  T
Q  272 acggctag 279  Q
     |||||||    
T  46870245 gcggctag 46870238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 117 - 262
Target Start/End: Original strand, 25589087 - 25589232
Alignment:
Q  117 ttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttcacact 215  Q
    |||||||||||||||||| || ||||||| |||||  ||||||| ||| |||| || ||||| || | | ||||||| ||||||| |||||||||||||     
T  25589087 ttacaaaaccggcttgtaaggagagggctgcccaagttttataaacactacacatgccatatatccaagcaatgtgg-actaaattcaccccttcacacc 25589185  T
Q  216 caacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgc 262  Q
    ||||||| ||| | ||||| ||| || |  ||||| |||||||||||    
T  25589186 caacacagtgaggatgttggaggctgaagtgaaggcaacccaaatgc 25589232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 12305129 - 12305226
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||||||||| | ||| |||||||||||||| || || | || ||||||||||||||||||| ||| |||||  |||  | |||||||||||||||||    
T  12305129 catatctctaagcaatatgggactaaatccatccttttaaacccaacacaatgaaggtgttgaaggctgcaaataagtcagcccaaatgccgcaatta 12305226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 3973167 - 3973083
Alignment:
Q  197 aaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctaggg 281  Q
    ||||||||||| ||| || |||||| |||||||||||| ||| ||||| ||||| ||||||||||  |||||||  |||||||||    
T  3973167 aaatccaccccctcaaacccaacacgatgaaggtgttgaaggctgcaatgaaggcaacccaaatgttgcaattaggcggctaggg 3973083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 10193467 - 10193543
Alignment:
Q  191 gggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaa 267  Q
    ||||||||| ||||||| |||||| ||||||||| |||| |||| ||| |||||  |||| ||||||||||||||||    
T  10193467 gggactaaacccaccccctcacacacaacacaataaaggagttggaggctgcaattaaggcaacccaaatgccgcaa 10193543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 23721161 - 23721077
Alignment:
Q  186 aatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||| ||||||||| |||||||||||    ||||||||||| | ||||| ||| ||||| ||||| |||||||||||||||||||    
T  23721161 aatgagggactaaacccaccccttcaagtccaacacaatgatgttgttggaggctgcaatgaaggcaacccaaatgccgcaatta 23721077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 257354 - 257417
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  257354 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 257417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 1663692 - 1663774
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||||||||||||||||||||| || |  ||||||||||||||||||| ||| ||||| |||||  | ||||| ||||||||||    
T  1663692 atgtgggactaaatccacccct-caaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggccgcaatta 1663774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 116 - 250
Target Start/End: Original strand, 10406601 - 10406736
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    ||||||||||| ||||||| |||||||||| ||||  |||||||| ||| ||||  | |||||||||| || ||||| ||||||| ||||| | ||| |     
T  10406601 cttacaaaaccagcttgtacggtgagggctgcccatgctttataaacactacacaggccatatctctaagagatgtgagactaaacccaccgcctcaaag 10406700  T
Q  215 tcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
     ||||||| |||| |||||| ||| ||||| |||||    
T  10406701 ccaacacagtgaaagtgttggaggctgcaatgaagg 10406736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 423
Target Start/End: Original strand, 14596156 - 14596215
Alignment:
Q  364 tctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaa 423  Q
    ||||||||||||||| | | ||||||||||||| | ||||||||||||||| ||||||||    
T  14596156 tctaggataggctctaatatcatcttaaaattttgattgggcctaactcaaccttacaaa 14596215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 423
Target Start/End: Original strand, 16015684 - 16015743
Alignment:
Q  364 tctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaa 423  Q
    ||||||||||||||| | | ||||||||||||| | ||||||||||||||| ||||||||    
T  16015684 tctaggataggctctaatatcatcttaaaattttgattgggcctaactcaaccttacaaa 16015743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 439
Target Start/End: Original strand, 21048672 - 21048747
Alignment:
Q  364 tctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtg 439  Q
    ||||| ||||||| | ||||||||||| ||||||||||| ||||||||||| |||| |||| | ||| ||||||||    
T  21048672 tctagaataggctttaacaccatcttagaatttgggttgagcctaactcaaccttataaaattggcttgtaaggtg 21048747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 14092256 - 14092314
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtg 231  Q
    |||||||||||| |||||||||||||| ||||||| |||||  || |||||||||||||    
T  14092256 catatctctaggcaatgtgggactaaacccaccccctcacatccagcacaatgaaggtg 14092314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 14402274 - 14402332
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtg 231  Q
    |||||||||||| |||||||||||||| ||||||| |||||  || |||||||||||||    
T  14402274 catatctctaggcaatgtgggactaaacccaccccctcacatccagcacaatgaaggtg 14402332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 28910049 - 28909967
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| ||| | || ||||| | |||||||    
T  28910049 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaagcaaaccaaagggcgcaatt 28909967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 206
Target Start/End: Original strand, 30899010 - 30899096
Alignment:
Q  121 aaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccc 206  Q
    |||||||||||||| | |||||||| ||||| |||||||  ||| |||| || | |||||||| | |||||||||||||||||||||    
T  30899010 aaaaccggcttgtaagatgagggctgcccaagctttatatacactacacatgacctatctctaagcaatgtgggactaaatccaccc 30899096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 442
Target Start/End: Original strand, 16015394 - 16015450
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagg 442  Q
    ||||||||||||| |||| |||||||||| |||||||||| ||||  ||||||||||    
T  16015394 tcttaaaatttggattggacctaactcaaccttacaaaaccagcttttaaggtgagg 16015450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 43167983 - 43168043
Alignment:
Q  190 tgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    |||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  43167983 tgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 43168043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 1661278 - 1661341
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||||||||||||||||| ||| |  |||| |||||||||||||| ||| ||||| |||||    
T  1661278 atgtgggactaaatccaccccgtcaaagccaacgcaatgaaggtgttggaggctgcaatgaagg 1661341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 441
Target Start/End: Original strand, 6427034 - 6427081
Alignment:
Q  394 tttgggttgggcctaactcaatcttacaaaactagctagtaaggtgag 441  Q
    ||||||||| |||||||||||||||||||||| | || ||||||||||    
T  6427034 tttgggttgagcctaactcaatcttacaaaaccaacttgtaaggtgag 6427081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 443
Target Start/End: Complemental strand, 39164740 - 39164689
Alignment:
Q  392 aatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    ||||||||||||||||||||||| |||| |||||| | | ||||||||||||    
T  39164740 aatttgggttgggcctaactcaaccttataaaactggtttgtaaggtgagga 39164689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 41670885 - 41670822
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||||||||||||||||| ||| |  ||||||||||| ||||||| ||| ||||| |||||    
T  41670885 atgtgggactaaatccaccccctcaaagccaacacaatgagggtgttggaggctgcaatgaagg 41670822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 8585108 - 8585066
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaagg 229  Q
    ||||||||||||||||||||||||| |  ||||||||||||||    
T  8585108 atgtgggactaaatccaccccttcaaagccaacacaatgaagg 8585066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 1504885 - 1504942
Alignment:
Q  186 aatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgca 243  Q
    ||||||||||||||| ||| |||||||||  |||| ||||||| ||||| ||||||||    
T  1504885 aatgtgggactaaattcacgccttcacacctaacataatgaagatgttggaggttgca 1504942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 425
Target Start/End: Complemental strand, 20171168 - 20171131
Alignment:
Q  388 ttaaaatttgggttgggcctaactcaatcttacaaaac 425  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  20171168 ttaaaatttcggttgggcctaactcaattttacaaaac 20171131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 425
Target Start/End: Original strand, 24965956 - 24966013
Alignment:
Q  368 ggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaac 425  Q
    ||||||||||||| || |||| |||||||||||||| || ||||||| | ||||||||    
T  24965956 ggataggctctgatactatctcaaaatttgggttggacccaactcaaccctacaaaac 24966013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 257268 - 257312
Alignment:
Q  402 gggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    ||||||||||||  ||||||||||  |||||||||||||||||||    
T  257268 gggcctaactcatccttacaaaaccggctagtaaggtgaggagtg 257312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 1661192 - 1661236
Alignment:
Q  402 gggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    |||||||||||| |||||||||||  ||| |||||||||||||||    
T  1661192 gggcctaactcattcttacaaaaccggcttgtaaggtgaggagtg 1661236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 442
Target Start/End: Original strand, 14595866 - 14595922
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagg 442  Q
    ||||||||||||| |||| |||||||||| ||||||||||  |||  ||||||||||    
T  14595866 tcttaaaatttggattggacctaactcaaccttacaaaaccggcttttaaggtgagg 14595922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 392 - 440
Target Start/End: Original strand, 21033611 - 21033659
Alignment:
Q  392 aatttgggttgggcctaactcaatcttacaaaactagctagtaaggtga 440  Q
    ||||||| ||||||||||||||| |||||||||| |||  |||||||||    
T  21033611 aatttggattgggcctaactcaaccttacaaaaccagcatgtaaggtga 21033659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 29780164 - 29780092
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaa 259  Q
    ||||| |||||||||||| |  ||| | |||||||||||||||||||| ||| ||||| ||||| || |||||    
T  29780164 atgtgagactaaatccactctctcaaagtcaacacaatgaaggtgttggaggctgcaatgaaggaaaaccaaa 29780092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 116 - 270
Target Start/End: Original strand, 9889334 - 9889496
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactg-tcatatctctaggaaa------tgtgggactaaa-tccacccc 207  Q
    |||||||||||||||||||||||||||||| |||||| || |||| ||| |||| | ||||||||||||| ||      |||||||||||| |||| |||    
T  9889334 cttacaaaaccggcttgtatggtgagggctgcccaaatttcataaacactacacggctcatatctctaggcaaaggcaatgtgggactaaaatccatccc 9889433  T
Q  208 ttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    ||||||| ||| ||||||||| ||| | ||||||||| ||||| |||||||||||| ||||||    
T  9889434 ttcacacccaatacaatgaagatgtcggaggttgcaatgaaggcaacccaaatgccacaatta 9889496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 116 - 266
Target Start/End: Complemental strand, 18183555 - 18183404
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacact-gtcatatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    ||||||||||||||||||| ||||| |||| ||||| |||||||| ||| ||||  | |||||||| ||| |||   |||||||||||| ||| ||||||    
T  18183555 cttacaaaaccggcttgtaaggtgaaggctgcccaagctttataaacactacacaagccatatctcaaggcaattcaggactaaatccatcccatcacac 18183456  T
Q  215 tcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgca 266  Q
     ||||||||||||||||||| ||| ||||| ||||| ||| |||||||||||    
T  18183455 ccaacacaatgaaggtgttggaggctgcaatgaaggcaactcaaatgccgca 18183404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 120 - 270
Target Start/End: Complemental strand, 39583585 - 39583434
Alignment:
Q  120 caaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaatccaccccttcacactcaa 218  Q
    ||||||||||||||| ||  |||||| |||||||||||||||||| |  | || ||| |||||||| ||   ||||||||||||||| ||||||||| ||    
T  39583585 caaaaccggcttgtaaggcaagggctgcccaaactttataagcactaggcatgccatttctctaggcaacaagggactaaatccacctcttcacactgaa 39583486  T
Q  219 cacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    ||||||| | |||||| ||  ||||| ||||| |||||||||||||||||||    
T  39583485 cacaatggaagtgttggagactgcaatgaaggcaacccaaatgccgcaatta 39583434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 306
Target Start/End: Original strand, 26760899 - 26761032
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattaca 272  Q
    |||||||||| | |||||||||||||| ||||||||||| |||||||||||| ||||||||| | | ||| |  |||| |||||||||||| | ||||      
T  26760899 catatctctaagcaatgtgggactaaacccaccccttcaaactcaacacaataaaggtgttgaatgctgccatcaaggcaacccaaatgccacgattagg 26760998  T
Q  273 cggctagggtcagattgcaatgatggaagaattt 306  Q
    ||||||||| ||||  ||||||| || |||||||    
T  26760999 cggctaggggcagaccgcaatgaaggcagaattt 26761032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 14408078 - 14407958
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgtc-atatctctaggaaatgtgggactaaatcca-ccccttcaca 213  Q
    ||||||||||||||||||| ||| |||| | | ||| |||||||| ||| |||| | | ||||||||||  |||||| ||| ||||||| ||||||||||    
T  14408078 cttacaaaaccggcttgtaaggtaagggttgcacaagctttataaacactacacagaccatatctctagacaatgtgagaccaaatccaaccccttcaca 14407979  T
Q  214 ctcaacacaatgaaggtgttg 234  Q
    |||||||||||||||||||||    
T  14407978 ctcaacacaatgaaggtgttg 14407958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 5511822 - 5511970
Alignment:
Q  121 aaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgtcatatctctaggaaatgtgggactaaatccaccccttcacactcaaca 220  Q
    ||||||||||| |  |||||||||  ||||| |||||||| ||| ||   |  ||||||||||| ||| | ||||||||| ||||||||||||| |||||    
T  5511822 aaaaccggctttttaggtgagggcagcccaagctttataaacactaccaagctatatctctaggcaatattggactaaatacaccccttcacacacaaca 5511921  T
Q  221 caatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||| |||| | | |  || ||||| ||||| ||||||||||||    
T  5511922 caatgaaggcgttggaagctataatgaaggcaaccctaatgccgcaatt 5511970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 15820188 - 15820271
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| |||||  |||| || ||||| ||||||||||    
T  15820188 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaataaaggcaaaccaaaggccgcaatta 15820271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 3008472 - 3008422
Alignment:
Q  392 aatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagg 442  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||||||||||    
T  3008472 aatttgggttgggcctaactcaaccttacaaaactggcttgtaaggtgagg 3008422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 262
Target Start/End: Original strand, 3003981 - 3004070
Alignment:
Q  174 atatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaa-cccaaatgc 262  Q
    ||||||||||| | |||||||||||| ||| ||| |||||| ||||||||||||||||||| ||| ||| | ||||| || |||||||||    
T  3003981 atatctctaggcattgtgggactaaacccatcccctcacacccaacacaatgaaggtgttggaggctgcgatgaaggaaagcccaaatgc 3004070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 11339771 - 11339840
Alignment:
Q  175 tatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    |||||||||| | ||||||||||||||||||| ||| |||  |||||||||||||||||| ||| |||||    
T  11339771 tatctctaggcagtgtgggactaaatccaccctttcgcacctaacacaatgaaggtgttggaggctgcaa 11339840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 1544152 - 1544085
Alignment:
Q  205 cccttcacactcaacacaatgaaggtgttgtaggttgcaacgaag--gtaacccaaatgccgcaatta 270  Q
    |||||||||| ||||||||||||||||||| |||| |||| ||||   ||||||||||||||||||||    
T  1544152 cccttcacacccaacacaatgaaggtgttggaggtggcaaagaagacataacccaaatgccgcaatta 1544085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 35872902 - 35872850
Alignment:
Q  177 tctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaagg 229  Q
    |||||||  ||||||||| ||||||||||||||||||| ||||||||||||||    
T  35872902 tctctagtcaatgtgggaataaatccaccccttcacacccaacacaatgaagg 35872850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 18901951 - 18902014
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  18901951 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 18902014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 5424843 - 5424925
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    ||||||||||||| ||||||  ||| |  ||||||||||||||||||| ||| ||||| ||||| || ||||| |||||||||    
T  5424843 atgtgggactaaacccaccctctcaaaggcaacacaatgaaggtgttggaggctgcaatgaaggaaaaccaaaggccgcaatt 5424925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 3976558 - 3976615
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  3976558 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 3976615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 18959594 - 18959505
Alignment:
Q  171 gtcatatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaat 260  Q
    ||||||||||||||  ||||| ||||||| ||||||| |||||| || ||||||||||| | ||  || ||||| ||||| |||||||||    
T  18959594 gtcatatctctaggtgatgtgagactaaacccaccccctcacacccagcacaatgaaggcgctggtggctgcaatgaagggaacccaaat 18959505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 173 - 309
Target Start/End: Complemental strand, 21374023 - 21373878
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccacccctt---------cacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgcc 263  Q
    |||||||||||| ||||||||||||||| ||||||||         ||||| ||||||||| | ||||||| ||| ||||| ||||| ||| ||||||||    
T  21374023 catatctctaggcaatgtgggactaaattcacccctttggccctttcacacccaacacaataatggtgttggaggctgcaatgaaggcaacacaaatgcc 21373924  T
Q  264 gcaattacacggctagggtcagattgcaatgatggaagaattttca 309  Q
    |||| ||  | ||||||  ||||  ||||||| || ||||||||||    
T  21373923 gcaagtaggcagctaggagcagaccgcaatgaaggcagaattttca 21373878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 26529454 - 26529507
Alignment:
Q  210 cacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgcc 263  Q
    ||||||||||| ||||| ||||||| ||| ||||| ||||||||||||||||||    
T  26529454 cacactcaacagaatgatggtgttggaggctgcaatgaaggtaacccaaatgcc 26529507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 43169259 - 43169202
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  43169259 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 43169202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 368 - 425
Target Start/End: Complemental strand, 43275567 - 43275510
Alignment:
Q  368 ggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaac 425  Q
    ||||||||||||| ||||| ||||| ||||||||||| |||||| || ||||||||||    
T  43275567 ggataggctctgataccatattaaactttgggttgggactaactgaaccttacaaaac 43275510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 21213971 - 21214019
Alignment:
Q  186 aatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttg 234  Q
    |||||||||||||||||||||| ||| |  |||||||||||||||||||    
T  21213971 aatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttg 21214019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 426
Target Start/End: Complemental strand, 3185993 - 3185934
Alignment:
Q  368 ggataggctctgacaccatcttaaaatttgggttgggcctaactcaa-tcttacaaaact 426  Q
    ||||||||||||| ||||||||||||||||||| | | ||||||||| || |||||||||    
T  3185993 ggataggctctgataccatcttaaaatttgggtcgagtctaactcaactcctacaaaact 3185934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 443
Target Start/End: Complemental strand, 7252300 - 7252233
Alignment:
Q  376 tctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    ||||| ||||||||| ||||||||||| ||||||||||| | |||||||| | || ||||| ||||||    
T  7252300 tctgataccatcttagaatttgggttgagcctaactcaaccctacaaaaccaacttgtaagatgagga 7252233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 17509126 - 17509063
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||| ||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  17509126 atgtggggctaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 17509063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 443
Target Start/End: Complemental strand, 33456074 - 33456023
Alignment:
Q  392 aatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagga 443  Q
    ||||||||||||||||||||||| ||||||||||  | | ||||||||||||    
T  33456074 aatttgggttgggcctaactcaaccttacaaaaccggtttgtaaggtgagga 33456023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 347 - 446
Target Start/End: Original strand, 3976421 - 3976516
Alignment:
Q  347 ggaagcccaacaacaagtctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    ||||||||||| | |  ||||||||||||||||| ||||| ||  ||||||||    ||||||||||  ||||||||||  ||| |||||||||||||||    
T  3976421 ggaagcccaacgatagatctaggataggctctgataccatgttgtaatttggg----gcctaactcatccttacaaaaccggcttgtaaggtgaggagtg 3976516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 3977090 - 3977136
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgtt 233  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||    
T  3977090 atgtgggactaaatccaccccctcagagccaacacaatgaaggtgtt 3977136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 425
Target Start/End: Original strand, 45634485 - 45634535
Alignment:
Q  375 ctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaac 425  Q
    |||||| ||||| ||||| ||||||| || |||||||||||||||||||||    
T  45634485 ctctgataccatgttaaactttgggtcggacctaactcaatcttacaaaac 45634535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 3976242 - 3976299
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |  ||||| ||||||||||||| ||| |||||    
T  3976242 atgtgggactaaatccaccccctcaaagccaacataatgaaggtgttggaggctgcaa 3976299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 430
Target Start/End: Original strand, 11064262 - 11064307
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaa-tcttacaaaactagct 430  Q
    ||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  11064262 tcttagaatttgggttgggcctaactcaactcttacaaaaccagct 11064307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 446
Target Start/End: Original strand, 21214168 - 21214246
Alignment:
Q  364 tctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    ||||||||||||| ||| ||||| || |||||||||    ||||||||||  ||||||||||  ||| |||||||||||||||    
T  21214168 tctaggataggctttgataccatgttgaaatttggg----gcctaactcatccttacaaaaccggcttgtaaggtgaggagtg 21214246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 23054343 - 23054286
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |  ||||||| ||||||||||| ||| |||||    
T  23054343 atgtgggactaaatccaccccctcaaagccaacacattgaaggtgttggaggctgcaa 23054286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 43195801 - 43195744
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||| ||||| ||| |  ||||||||||||||||||| ||| |||||    
T  43195801 atgtgggactaaatctaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 43195744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 2333359 - 2333403
Alignment:
Q  402 gggcctaactcaatcttacaaaactagctagtaaggtgaggagtg 446  Q
    |||| |||||||| ||||||||||| ||| |||||||||||||||    
T  2333359 gggcttaactcaaccttacaaaactggcttgtaaggtgaggagtg 2333403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 414
Target Start/End: Original strand, 13982119 - 13982147
Alignment:
Q  386 tcttaaaatttgggttgggcctaactcaa 414  Q
    |||||||||||||||||||||||||||||    
T  13982119 tcttaaaatttgggttgggcctaactcaa 13982147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 21214287 - 21214331
Alignment:
Q  186 aatgtgggactaaatccaccccttcacactcaacacaatgaaggt 230  Q
    |||||||||||||||||||||| ||| |  |||||||||||||||    
T  21214287 aatgtgggactaaatccaccccctcaaagccaacacaatgaaggt 21214331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 33070153 - 33070117
Alignment:
Q  173 catatctctaggaaatgtgggactaaatccacccctt 209  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  33070153 catatctctaagaaatgtggaactaaatccacccctt 33070117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 33070440 - 33070356
Alignment:
Q  186 aatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||||||  |||||| |||| | |||||| ||||| |||||||||| || ||| ||||| | ||  |||||||||||||||||||    
T  33070440 aatgtggatctaaattcacctcctcacacccaacataatgaaggtgctgaaggatgcaatggagacaacccaaatgccgcaatta 33070356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 36901231 - 36901147
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacac-tgtcatatctctaggaaatgtgggactaaa 199  Q
    |||||||||  |||||||| |||||||||| |  || |||||||| ||| |||| ||||||||||||| | |||| |||||||||    
T  36901231 cttacaaaaatggcttgtaaggtgagggctgcttaagctttataaacactacacatgtcatatctctaagcaatgggggactaaa 36901147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 1205639 - 1205731
Alignment:
Q  189 gtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctaggg 281  Q
    |||||||| ||||||||||||||||| |||||||||||| |||||||||| ||||| ||||| |||||||||||| ||||||  |||||||||    
T  1205639 gtgggactgaatccaccccttcacacccaacacaatgaaagtgttgtaggctgcaatgaaggaaacccaaatgccacaattaggcggctaggg 1205731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 1206194 - 1206307
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgt-catatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    |||||||| || ||||||| |||||||||| || || |||||||| ||| |||| |  |||||||||||||||||||||||||||| || ||||||||||    
T  1206194 cttacaaatccagcttgtaaggtgagggctgcctaagctttataaacactacacaggacatatctctaggaaatgtgggactaaattcatcccttcacac 1206293  T
Q  215 tcaacacaatgaag 228  Q
     |||||||||||||    
T  1206294 ccaacacaatgaag 1206307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 191 - 295
Target Start/End: Original strand, 9602078 - 9602182
Alignment:
Q  191 gggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctagggtcagattgc 290  Q
    |||||||||||||||||||||||| ||||||||||||||||||| | | || || ||||| || |||||||| |||||||  ||||||||| |||| |||    
T  9602078 gggactaaatccaccccttcacacccaacacaatgaaggtgttggaagctggaatgaaggcaatccaaatgctgcaattaggcggctaggggcagactgc 9602177  T
Q  291 aatga 295  Q
    |||||    
T  9602178 aatga 9602182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 116 - 270
Target Start/End: Complemental strand, 18286974 - 18286819
Alignment:
Q  116 cttacaaaaccggcttgtatggtgagggcttcccaaactttataagcacaacactgtc-atatctctaggaaatgtgggactaaatccaccccttcacac 214  Q
    ||||||||||||| ||||| || ||| ||| ||||| |||||||| ||| |||  | | |||||||||||||||||||||||||||| ||||||||||||    
T  18286974 cttacaaaaccggtttgtaaggcgagtgctccccaagctttataa-cactacataggccatatctctaggaaatgtgggactaaatcaaccccttcacac 18286876  T
Q  215 tcaacacaatgaaggtgttgtaggttgcaacgaaggtaaccc-aaatgccgcaatta 270  Q
     ||||||  ||||||||||| ||| ||||| |||   ||||| ||||||||||||||    
T  18286875 ccaacacggtgaaggtgttggaggatgcaatgaacccaacccaaaatgccgcaatta 18286819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 192 - 306
Target Start/End: Original strand, 1205956 - 1206070
Alignment:
Q  192 ggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaattacacggctagggtcagattgca 291  Q
    |||||||||||||||||||||||  ||||| ||||||||| || ||| ||||| ||||| |||||||||||||||||||  ||||||||| | ||  |||    
T  1205956 ggactaaatccaccccttcacacctaacacgatgaaggtgctggaggctgcaatgaaggcaacccaaatgccgcaattaggcggctaggggcggaccgca 1206055  T
Q  292 atgatggaagaattt 306  Q
    |||| || |||||||    
T  1206056 atgaaggcagaattt 1206070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 442
Target Start/End: Original strand, 1206127 - 1206220
Alignment:
Q  349 aagcccaacaacaagtctaggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgagg 442  Q
    ||||| ||||||| || ||||||||| ||||| ||||||||| |||||||||||| ||||||| |  |||||||| | |||| |||||||||||    
T  1206127 aagcctaacaacaggtataggataggttctgataccatcttagaatttgggttggacctaacttagccttacaaatccagcttgtaaggtgagg 1206220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 12308556 - 12308635
Alignment:
Q  165 aacactgtcatatctctaggaaatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||| ||||||| |||| | |||||| |||||||||||||  |||| |||||||||||||||||||||| ||| |||||    
T  12308556 aacacagtcatatttctaagtaatgtgagactaaatccaccttttcaaactcaacacaatgaaggtgttggaggatgcaa 12308635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 9237177 - 9237093
Alignment:
Q  186 aatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    ||||||| |||||||||||  |||||||| ||||||||||||||||||| ||  ||||| ||||| ||  ||||| |||||||||    
T  9237177 aatgtggaactaaatccactacttcacacacaacacaatgaaggtgttggagagtgcaatgaaggcaagacaaataccgcaatta 9237093  T

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Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 10733524 - 10733588
Alignment:
Q  186 aatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    |||||||||||||||||||||| ||| |  ||||||||||||| ||||| ||| |||||||||||    
T  10733524 aatgtgggactaaatccaccccctcaaagccaacacaatgaagatgttggaggctgcaacgaagg 10733588  T

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Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 130761 - 130824
Alignment:
Q  194 actaaatccaccccttcacactcaacacaatgaagg-tgttgtaggttgcaacgaaggtaaccc 256  Q
    ||||||||||||||||||||| |||||||||||||| ||||| ||| ||||| ||||| |||||    
T  130761 actaaatccaccccttcacacccaacacaatgaaggttgttggaggctgcaatgaaggcaaccc 130824  T

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Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 174 - 262
Target Start/End: Complemental strand, 9216560 - 9216468
Alignment:
Q  174 atatctctaggaaatgtgggactaaatccaccccttcacactcaaca----caatgaaggtgttgtaggttgcaacgaaggtaacccaaatgc 262  Q
    ||||||||||| |||| |||| ||||||||| | ||||| |||||      |||||||||||||| |||||||||| ||||||||||||||||    
T  9216560 atatctctaggcaatgagggaataaatccactcattcactctcaattaaatcaatgaaggtgttggaggttgcaaccaaggtaacccaaatgc 9216468  T

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Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 10418425 - 10418488
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  10418425 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 10418488  T

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Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 24055196 - 24055259
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  24055196 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 24055259  T

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Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 12134570 - 12134652
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatt 269  Q
    |||||||||||| |||||||| ||| |  ||||||||||||||| ||| ||| ||||| ||||| || ||||| |||||||||    
T  12134570 atgtgggactaagtccaccccgtcaaagccaacacaatgaaggtattggaggctgcaatgaaggcaaaccaaaggccgcaatt 12134652  T

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Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 1409028 - 1408971
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  1409028 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 1408971  T

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Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 268
Target Start/End: Complemental strand, 16509800 - 16509712
Alignment:
Q  181 taggaaatgtgggactaaatccaccccttcacactcaacac-aatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaat 268  Q
    |||| ||||||||||||||||||||| ||||||  || ||| |||||||| |||| | | ||||| ||||| |||||||||| ||||||    
T  16509800 taggcaatgtgggactaaatccacccgttcacatccatcacaaatgaaggcgttgaaagctgcaatgaaggcaacccaaatgtcgcaat 16509712  T

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Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 31960 - 32043
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaaggtaacccaaatgccgcaatta 270  Q
    |||| |||||||||||||||| ||| |  ||||| ||||||||||||| ||  ||||| ||||| |||  ||||||||||||||    
T  31960 atgttggactaaatccaccccctcaaagccaacaaaatgaaggtgttggagactgcaatgaaggcaacttaaatgccgcaatta 32043  T

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Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 19054510 - 19054447
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    |||||||||||| |||||||| ||| |  ||||||||||||||||||| ||| ||||| |||||    
T  19054510 atgtgggactaattccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 19054447  T

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Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 9156188 - 9156250
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaag 249  Q
    |||||||| |||||||||||||||| ||  |||||| ||||||||||| ||| ||||| ||||    
T  9156188 atgtgggaataaatccaccccttcaaacctaacacagtgaaggtgttggaggatgcaatgaag 9156250  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 441
Target Start/End: Complemental strand, 19385643 - 19385571
Alignment:
Q  368 ggataggctctgacaccatcttaaaatttgggttgggcctaactcaatcttacaaaactagctagtaaggtgag 441  Q
    ||||||||| ||| ||||||||| ||||||||| | ||||||||||| | |||||||| |||| | ||||||||    
T  19385643 ggataggctttgataccatcttagaatttgggt-gagcctaactcaaccatacaaaaccagcttgaaaggtgag 19385571  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 19753691 - 19753748
Alignment:
Q  187 atgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 244  Q
    ||||||||||||||||||||| ||| |   |||||||||||||||||| ||| |||||    
T  19753691 atgtgggactaaatccaccccctcaaagctaacacaatgaaggtgttgcaggctgcaa 19753748  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 1744928 - 1744992
Alignment:
Q  186 aatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    ||||||||||||| |||||||| ||| |   |||||||||||||||||| ||| ||||| |||||    
T  1744928 aatgtgggactaactccaccccctcaaagcaaacacaatgaaggtgttggaggctgcaatgaagg 1744992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 21043871 - 21043931
Alignment:
Q  190 tgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    |||||||||||||||||| ||| |   |||||||||||||||||| ||| ||||| |||||    
T  21043871 tgggactaaatccaccccctcaaagcaaacacaatgaaggtgttggaggctgcaatgaagg 21043931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 21067147 - 21067207
Alignment:
Q  190 tgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    |||||||||||||||||| ||| |   |||||||||||||||||| ||| ||||| |||||    
T  21067147 tgggactaaatccaccccctcaaagcaaacacaatgaaggtgttggaggctgcaatgaagg 21067207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 21088938 - 21088998
Alignment:
Q  190 tgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 250  Q
    |||||||||||||||||| ||| |   |||||||||||||||||| ||| ||||| |||||    
T  21088938 tgggactaaatccaccccctcaaagcaaacacaatgaaggtgttggaggctgcaatgaagg 21088998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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