View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20611_high_12 (Length: 309)

Name: NF20611_high_12
Description: NF20611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20611_high_12
NF20611_high_12
[»] chr6 (45 HSPs)
chr6 (4-297)||(24588659-24588953)
chr6 (11-295)||(8748108-8748391)
chr6 (18-254)||(6112253-6112509)
chr6 (123-295)||(2759983-2760154)
chr6 (4-189)||(17964016-17964197)
chr6 (79-224)||(12689393-12689536)
chr6 (113-297)||(15991235-15991421)
chr6 (20-113)||(2077317-2077410)
chr6 (78-176)||(16835690-16835786)
chr6 (74-176)||(22610013-22610113)
chr6 (78-179)||(4156886-4156985)
chr6 (78-175)||(17914056-17914151)
chr6 (20-109)||(16760891-16760980)
chr6 (20-113)||(31477200-31477293)
chr6 (79-237)||(14509378-14509534)
chr6 (78-189)||(11570276-11570386)
chr6 (20-113)||(15704407-15704499)
chr6 (20-109)||(16624925-16625014)
chr6 (20-113)||(19772508-19772601)
chr6 (20-109)||(22949741-22949830)
chr6 (20-109)||(22953697-22953786)
chr6 (20-109)||(23872185-23872274)
chr6 (20-109)||(23876141-23876230)
chr6 (78-176)||(2699626-2699722)
chr6 (78-175)||(6407393-6407489)
chr6 (20-113)||(22806856-22806949)
chr6 (75-224)||(11534235-11534384)
chr6 (78-172)||(11559748-11559841)
chr6 (18-85)||(14073668-14073735)
chr6 (77-175)||(20747832-20747928)
chr6 (13-86)||(3902136-3902209)
chr6 (13-86)||(3902494-3902567)
chr6 (254-297)||(6112683-6112726)
chr6 (18-85)||(18387465-18387532)
chr6 (78-224)||(19994927-19995071)
chr6 (80-224)||(25313987-25314130)
chr6 (80-224)||(26201481-26201624)
chr6 (20-113)||(27324555-27324647)
chr6 (78-141)||(12405888-12405949)
chr6 (128-176)||(14042056-14042104)
chr6 (80-161)||(33687181-33687261)
chr6 (78-174)||(11428427-11428522)
chr6 (82-179)||(22694844-22694939)
chr6 (24-86)||(29325759-29325821)
chr6 (80-166)||(14575165-14575250)
[»] chr5 (42 HSPs)
chr5 (4-297)||(12044616-12044909)
chr5 (4-297)||(6154890-6155183)
chr5 (19-297)||(3666235-3666514)
chr5 (4-297)||(36941746-36942036)
chr5 (4-297)||(557019-557309)
chr5 (4-297)||(36936992-36937282)
chr5 (4-297)||(561791-562081)
chr5 (4-297)||(32461025-32461318)
chr5 (20-297)||(41996984-41997262)
chr5 (20-297)||(42001753-42002031)
chr5 (18-297)||(13300984-13301260)
chr5 (18-297)||(31731860-31732137)
chr5 (18-297)||(21323470-21323747)
chr5 (48-297)||(23977103-23977361)
chr5 (4-224)||(29167430-29167647)
chr5 (13-161)||(36424122-36424268)
chr5 (20-176)||(7452222-7452376)
chr5 (20-224)||(37549624-37549826)
chr5 (20-159)||(37652422-37652559)
chr5 (4-224)||(26667694-26667916)
chr5 (4-224)||(26939291-26939513)
chr5 (151-220)||(1429732-1429801)
chr5 (166-299)||(9911466-9911600)
chr5 (78-218)||(40148323-40148461)
chr5 (78-237)||(39518803-39518962)
chr5 (78-237)||(39523442-39523601)
chr5 (69-161)||(36429194-36429285)
chr5 (20-109)||(10753959-10754048)
chr5 (78-189)||(9726285-9726393)
chr5 (78-229)||(23688510-23688659)
chr5 (78-224)||(37248332-37248478)
chr5 (80-161)||(20180690-20180769)
chr5 (80-176)||(35679421-35679518)
chr5 (4-81)||(36430173-36430249)
chr5 (78-174)||(6513445-6513540)
chr5 (78-176)||(4872368-4872464)
chr5 (81-224)||(23757347-23757489)
chr5 (81-224)||(23822803-23822945)
chr5 (20-85)||(41096931-41096996)
chr5 (18-85)||(21826756-21826823)
chr5 (74-170)||(16115758-16115853)
chr5 (78-141)||(12103530-12103591)
[»] chr7 (45 HSPs)
chr7 (13-297)||(8076370-8076655)
chr7 (4-297)||(9650441-9650733)
chr7 (50-294)||(23866396-23866641)
chr7 (80-297)||(9008480-9008697)
chr7 (18-297)||(19640622-19640899)
chr7 (18-297)||(27256559-27256837)
chr7 (18-297)||(40864857-40865134)
chr7 (1-224)||(44509851-44510073)
chr7 (4-161)||(26341691-26341845)
chr7 (4-142)||(47102015-47102152)
chr7 (78-218)||(42626120-42626258)
chr7 (20-113)||(14259511-14259604)
chr7 (20-113)||(18426432-18426525)
chr7 (20-113)||(20485092-20485185)
chr7 (20-113)||(20488453-20488546)
chr7 (20-113)||(45169427-45169520)
chr7 (234-297)||(44510379-44510442)
chr7 (78-218)||(4579923-4580062)
chr7 (20-113)||(16459877-16459970)
chr7 (20-113)||(16580734-16580827)
chr7 (75-176)||(3880447-3880546)
chr7 (78-161)||(12799868-12799950)
chr7 (120-224)||(16372816-16372921)
chr7 (92-176)||(4930689-4930772)
chr7 (18-88)||(47761844-47761914)
chr7 (78-172)||(2595294-2595387)
chr7 (13-85)||(19096787-19096859)
chr7 (20-108)||(32302349-32302437)
chr7 (74-170)||(10387881-10387975)
chr7 (78-157)||(44422669-44422746)
chr7 (80-189)||(8268749-8268857)
chr7 (78-168)||(26286675-26286763)
chr7 (19-85)||(8954762-8954828)
chr7 (20-109)||(14928132-14928222)
chr7 (20-109)||(15351598-15351688)
chr7 (1-51)||(29727282-29727331)
chr7 (78-114)||(13313816-13313852)
chr7 (19-85)||(838927-838993)
chr7 (19-85)||(846103-846169)
chr7 (19-85)||(853480-853546)
chr7 (19-85)||(1204107-1204173)
chr7 (19-85)||(1211484-1211550)
chr7 (133-175)||(27238673-27238715)
chr7 (74-107)||(6590542-6590575)
chr7 (24-84)||(36477511-36477571)
[»] chr4 (70 HSPs)
chr4 (13-297)||(47574982-47575267)
chr4 (4-297)||(13521466-13521758)
chr4 (13-297)||(41817107-41817387)
chr4 (4-297)||(3997543-3997835)
chr4 (18-297)||(7902605-7902884)
chr4 (18-297)||(34560743-34561024)
chr4 (20-176)||(5270896-5271050)
chr4 (4-224)||(8694134-8694351)
chr4 (18-252)||(39319931-39320162)
chr4 (78-297)||(40840658-40840872)
chr4 (78-259)||(42316161-42316341)
chr4 (4-189)||(5927675-5927856)
chr4 (18-224)||(31766292-31766496)
chr4 (78-295)||(43477561-43477775)
chr4 (78-238)||(39216634-39216795)
chr4 (59-176)||(31728903-31729018)
chr4 (78-189)||(19540711-19540820)
chr4 (78-189)||(51698375-51698484)
chr4 (160-252)||(8661071-8661164)
chr4 (20-113)||(15011312-15011405)
chr4 (78-176)||(16421508-16421604)
chr4 (78-176)||(37259396-37259492)
chr4 (78-218)||(19107036-19107174)
chr4 (235-297)||(31298097-31298159)
chr4 (20-109)||(12488307-12488396)
chr4 (20-109)||(14953551-14953640)
chr4 (20-109)||(25690503-25690592)
chr4 (131-216)||(31786035-31786120)
chr4 (82-224)||(33462900-33463040)
chr4 (79-224)||(48276191-48276335)
chr4 (74-239)||(6943186-6943350)
chr4 (78-176)||(31269493-31269588)
chr4 (78-176)||(31273982-31274077)
chr4 (78-176)||(37264096-37264192)
chr4 (20-109)||(15225673-15225763)
chr4 (79-218)||(8029876-8030013)
chr4 (20-113)||(10713445-10713538)
chr4 (20-113)||(10927215-10927308)
chr4 (20-113)||(18023126-18023219)
chr4 (113-224)||(8536657-8536769)
chr4 (20-96)||(31297986-31298061)
chr4 (78-161)||(55252147-55252228)
chr4 (74-172)||(23093587-23093683)
chr4 (78-176)||(32081658-32081753)
chr4 (113-224)||(2820214-2820327)
chr4 (78-224)||(19906659-19906803)
chr4 (78-161)||(47244625-47244706)
chr4 (18-177)||(8660897-8661055)
chr4 (78-172)||(12823421-12823513)
chr4 (18-85)||(14899110-14899177)
chr4 (82-192)||(33468539-33468649)
chr4 (78-145)||(42758389-42758455)
chr4 (74-174)||(55150053-55150155)
chr4 (18-85)||(14868562-14868629)
chr4 (18-85)||(14877305-14877372)
chr4 (78-175)||(13059930-13060024)
chr4 (123-213)||(15805214-15805304)
chr4 (128-188)||(1150946-1151006)
chr4 (93-176)||(15020070-15020151)
chr4 (13-53)||(30564215-30564255)
chr4 (20-76)||(31728837-31728893)
chr4 (133-176)||(2574977-2575020)
chr4 (133-176)||(20513519-20513562)
chr4 (18-81)||(26034725-26034788)
chr4 (13-87)||(10318577-10318651)
chr4 (237-297)||(12878562-12878619)
chr4 (79-179)||(13059873-13059971)
chr4 (135-176)||(39991571-39991612)
chr4 (32-88)||(24490253-24490309)
chr4 (128-172)||(33722558-33722602)
[»] chr8 (42 HSPs)
chr8 (4-297)||(43302165-43302458)
chr8 (4-297)||(4237822-4238112)
chr8 (4-297)||(4242561-4242851)
chr8 (13-293)||(31449354-31449632)
chr8 (4-297)||(37772028-37772320)
chr8 (18-297)||(34818200-34818477)
chr8 (13-297)||(25367475-25367758)
chr8 (18-297)||(8330857-8331135)
chr8 (65-224)||(15951069-15951228)
chr8 (78-218)||(17953506-17953646)
chr8 (20-113)||(21387669-21387762)
chr8 (78-224)||(44925453-44925597)
chr8 (78-218)||(17026352-17026491)
chr8 (78-218)||(17556844-17556983)
chr8 (78-176)||(38181775-38181871)
chr8 (78-171)||(18875920-18876011)
chr8 (20-109)||(18862066-18862155)
chr8 (20-113)||(21384249-21384342)
chr8 (78-172)||(1910487-1910579)
chr8 (78-176)||(17020818-17020914)
chr8 (78-176)||(17551255-17551351)
chr8 (78-159)||(19167131-19167210)
chr8 (78-224)||(40125427-40125572)
chr8 (82-176)||(1807914-1808006)
chr8 (20-106)||(21827435-21827521)
chr8 (20-109)||(23915001-23915090)
chr8 (137-228)||(7002066-7002158)
chr8 (121-224)||(15875269-15875373)
chr8 (22-113)||(25733663-25733755)
chr8 (74-227)||(14035847-14036000)
chr8 (20-113)||(21411527-21411621)
chr8 (20-113)||(21806019-21806113)
chr8 (78-161)||(36684064-36684148)
chr8 (20-85)||(16066716-16066782)
chr8 (74-177)||(2966098-2966199)
chr8 (137-176)||(13799460-13799499)
chr8 (133-176)||(19954685-19954728)
chr8 (84-187)||(31439606-31439708)
chr8 (134-176)||(33417015-33417057)
chr8 (20-85)||(4582792-4582857)
chr8 (134-202)||(2536796-2536864)
chr8 (133-189)||(5884412-5884468)
[»] chr2 (40 HSPs)
chr2 (4-295)||(10160201-10160493)
chr2 (33-297)||(35602247-35602511)
chr2 (18-297)||(30643446-30643724)
chr2 (18-297)||(30658499-30658777)
chr2 (18-297)||(6297386-6297664)
chr2 (4-189)||(17968420-17968601)
chr2 (1-224)||(19891927-19892147)
chr2 (73-297)||(17453132-17453350)
chr2 (4-210)||(28855544-28855744)
chr2 (4-224)||(18344844-18345049)
chr2 (210-297)||(19538709-19538796)
chr2 (78-228)||(42926174-42926322)
chr2 (74-176)||(9184946-9185046)
chr2 (78-218)||(25477827-25477965)
chr2 (78-218)||(25496855-25496993)
chr2 (20-113)||(1284019-1284112)
chr2 (20-113)||(23068249-23068342)
chr2 (78-237)||(30651322-30651481)
chr2 (134-218)||(19094080-19094165)
chr2 (20-109)||(30344412-30344501)
chr2 (81-176)||(9180262-9180355)
chr2 (78-176)||(1934525-1934621)
chr2 (78-218)||(12797352-12797490)
chr2 (20-109)||(9785659-9785748)
chr2 (74-161)||(31327234-31327320)
chr2 (78-176)||(7737394-7737490)
chr2 (18-85)||(25375422-25375489)
chr2 (84-228)||(13291070-13291213)
chr2 (82-224)||(29678176-29678317)
chr2 (18-85)||(24286388-24286455)
chr2 (18-85)||(24292956-24293023)
chr2 (20-85)||(377786-377849)
chr2 (128-174)||(17255011-17255057)
chr2 (20-85)||(6856730-6856795)
chr2 (74-224)||(19542183-19542333)
chr2 (20-85)||(42248760-42248825)
chr2 (196-256)||(28855340-28855400)
chr2 (19-85)||(26897159-26897225)
chr2 (237-297)||(19094200-19094258)
chr2 (20-85)||(34069952-34070017)
[»] scaffold0182 (1 HSPs)
scaffold0182 (4-297)||(9361-9652)
[»] scaffold0045 (2 HSPs)
scaffold0045 (40-293)||(83378-83633)
scaffold0045 (13-261)||(81174-81420)
[»] chr1 (42 HSPs)
chr1 (34-297)||(18784064-18784327)
chr1 (4-297)||(3094412-3094702)
chr1 (18-297)||(41097452-41097730)
chr1 (20-297)||(8267333-8267608)
chr1 (1-224)||(17213922-17214139)
chr1 (78-297)||(40232919-40233138)
chr1 (20-297)||(33055363-33055634)
chr1 (20-176)||(10140562-10140716)
chr1 (20-176)||(10135794-10135948)
chr1 (13-224)||(51040976-51041185)
chr1 (4-224)||(26927178-26927395)
chr1 (74-226)||(16649162-16649312)
chr1 (78-218)||(16833899-16834037)
chr1 (78-189)||(47450757-47450866)
chr1 (20-109)||(1924550-1924639)
chr1 (20-109)||(20923564-20923653)
chr1 (20-109)||(39243519-39243608)
chr1 (20-109)||(39247074-39247163)
chr1 (20-109)||(41387471-41387560)
chr1 (78-176)||(39200293-39200389)
chr1 (80-168)||(12260468-12260554)
chr1 (78-176)||(25844220-25844317)
chr1 (78-237)||(7882389-7882548)
chr1 (78-176)||(19798532-19798628)
chr1 (133-252)||(39037296-39037417)
chr1 (79-218)||(28434167-28434304)
chr1 (128-175)||(9328099-9328146)
chr1 (78-218)||(23192359-23192498)
chr1 (4-86)||(1067013-1067094)
chr1 (73-176)||(2493402-2493504)
chr1 (18-82)||(22428689-22428753)
chr1 (128-175)||(9352945-9352992)
chr1 (18-85)||(26198891-26198958)
chr1 (4-82)||(52100702-52100779)
chr1 (20-85)||(21498184-21498249)
chr1 (74-110)||(40166494-40166530)
chr1 (18-53)||(16836780-16836815)
chr1 (133-176)||(33380568-33380611)
chr1 (78-113)||(39587891-39587926)
chr1 (74-175)||(38621175-38621274)
chr1 (20-85)||(14819505-14819570)
chr1 (128-177)||(19309244-19309293)
[»] chr3 (63 HSPs)
chr3 (4-297)||(3033966-3034256)
chr3 (4-297)||(3672909-3673199)
chr3 (4-297)||(3692941-3693231)
chr3 (4-297)||(8888253-8888543)
chr3 (4-297)||(8883493-8883783)
chr3 (4-297)||(10585671-10585961)
chr3 (13-297)||(8070001-8070284)
chr3 (1-297)||(45904023-45904316)
chr3 (78-297)||(6595908-6596127)
chr3 (10-297)||(53358420-53358709)
chr3 (4-223)||(39775185-39775401)
chr3 (20-176)||(14438172-14438326)
chr3 (4-202)||(18472450-18472644)
chr3 (4-112)||(32473481-32473588)
chr3 (121-274)||(28125475-28125627)
chr3 (76-259)||(35456491-35456674)
chr3 (4-224)||(18467645-18467850)
chr3 (20-113)||(18699274-18699367)
chr3 (74-161)||(20520438-20520523)
chr3 (78-175)||(7570748-7570844)
chr3 (78-176)||(12965419-12965515)
chr3 (78-176)||(24037903-24037999)
chr3 (151-226)||(49019798-49019873)
chr3 (122-224)||(12900640-12900742)
chr3 (113-211)||(18011749-18011847)
chr3 (79-176)||(23660997-23661092)
chr3 (78-189)||(757896-758006)
chr3 (20-109)||(4106822-4106911)
chr3 (20-109)||(4110674-4110763)
chr3 (20-113)||(8488886-8488979)
chr3 (20-109)||(15965564-15965653)
chr3 (20-109)||(15969488-15969577)
chr3 (20-109)||(15973412-15973501)
chr3 (20-109)||(16749416-16749505)
chr3 (20-109)||(19776394-19776483)
chr3 (78-176)||(23665655-23665751)
chr3 (79-224)||(29350660-29350803)
chr3 (74-158)||(3656757-3656840)
chr3 (20-113)||(14671898-14671991)
chr3 (20-113)||(22758676-22758769)
chr3 (20-107)||(9707087-9707174)
chr3 (78-176)||(27709398-27709494)
chr3 (20-113)||(37439056-37439149)
chr3 (78-172)||(3419459-3419552)
chr3 (78-224)||(55326196-55326339)
chr3 (128-211)||(19339739-19339822)
chr3 (133-218)||(2207331-2207416)
chr3 (83-218)||(46964435-46964570)
chr3 (78-143)||(55431782-55431845)
chr3 (20-113)||(43888597-43888690)
chr3 (80-211)||(17025636-17025765)
chr3 (128-176)||(48431937-48431985)
chr3 (18-85)||(29761-29828)
chr3 (18-85)||(8223468-8223535)
chr3 (20-85)||(18350271-18350336)
chr3 (18-85)||(21494116-21494180)
chr3 (133-176)||(4662577-4662620)
chr3 (30-85)||(6025382-6025437)
chr3 (18-85)||(8196985-8197052)
chr3 (133-175)||(16983375-16983417)
chr3 (13-54)||(47408645-47408686)
chr3 (139-175)||(1640531-1640567)
chr3 (34-88)||(26706990-26707045)
[»] scaffold0060 (2 HSPs)
scaffold0060 (18-297)||(52411-52689)
scaffold0060 (18-218)||(47467-47665)
[»] scaffold0020 (1 HSPs)
scaffold0020 (18-297)||(734-1012)
[»] scaffold0041 (1 HSPs)
scaffold0041 (18-293)||(35198-35472)
[»] scaffold0061 (2 HSPs)
scaffold0061 (148-297)||(46101-46250)
scaffold0061 (4-113)||(49465-49573)
[»] scaffold0017 (2 HSPs)
scaffold0017 (148-297)||(152537-152686)
scaffold0017 (4-113)||(149061-149169)
[»] scaffold0628 (1 HSPs)
scaffold0628 (18-259)||(6748-6988)
[»] scaffold0352 (1 HSPs)
scaffold0352 (78-224)||(7526-7670)
[»] scaffold0008 (2 HSPs)
scaffold0008 (78-207)||(256226-256353)
scaffold0008 (225-297)||(256149-256219)
[»] scaffold0054 (2 HSPs)
scaffold0054 (74-176)||(25923-26023)
scaffold0054 (78-175)||(29643-29738)
[»] scaffold0011 (2 HSPs)
scaffold0011 (78-218)||(145961-146100)
scaffold0011 (20-113)||(126908-127001)
[»] scaffold0292 (1 HSPs)
scaffold0292 (20-113)||(7672-7765)
[»] scaffold0018 (2 HSPs)
scaffold0018 (20-113)||(21812-21905)
scaffold0018 (131-176)||(171352-171397)
[»] scaffold0002 (2 HSPs)
scaffold0002 (78-224)||(4482-4627)
scaffold0002 (74-202)||(443471-443596)
[»] scaffold0572 (1 HSPs)
scaffold0572 (20-109)||(10472-10561)
[»] scaffold0452 (1 HSPs)
scaffold0452 (20-113)||(12464-12557)
[»] scaffold0415 (1 HSPs)
scaffold0415 (20-109)||(997-1086)
[»] scaffold0232 (1 HSPs)
scaffold0232 (20-113)||(11699-11792)
[»] scaffold0229 (1 HSPs)
scaffold0229 (20-109)||(10922-11011)
[»] scaffold0157 (1 HSPs)
scaffold0157 (20-109)||(32081-32170)
[»] scaffold0141 (1 HSPs)
scaffold0141 (20-109)||(13508-13597)
[»] scaffold0124 (1 HSPs)
scaffold0124 (20-109)||(21482-21571)
[»] scaffold0031 (1 HSPs)
scaffold0031 (20-109)||(35507-35596)
[»] scaffold0240 (1 HSPs)
scaffold0240 (78-176)||(4442-4537)
[»] scaffold0034 (1 HSPs)
scaffold0034 (20-113)||(121071-121164)
[»] scaffold0070 (1 HSPs)
scaffold0070 (18-101)||(58942-59026)
[»] scaffold0205 (1 HSPs)
scaffold0205 (20-109)||(30775-30865)
[»] scaffold0019 (1 HSPs)
scaffold0019 (20-109)||(30192-30282)
[»] scaffold0575 (1 HSPs)
scaffold0575 (20-113)||(5377-5470)
[»] scaffold0096 (1 HSPs)
scaffold0096 (20-109)||(22218-22307)
[»] scaffold0015 (2 HSPs)
scaffold0015 (18-85)||(193761-193828)
scaffold0015 (20-76)||(188077-188133)
[»] scaffold0226 (1 HSPs)
scaffold0226 (74-174)||(5844-5943)
[»] scaffold1910 (1 HSPs)
scaffold1910 (20-85)||(399-464)
[»] scaffold0357 (1 HSPs)
scaffold0357 (18-85)||(3841-3908)
[»] scaffold0155 (1 HSPs)
scaffold0155 (18-85)||(22208-22275)
[»] scaffold0004 (1 HSPs)
scaffold0004 (18-81)||(199729-199792)
[»] scaffold0327 (1 HSPs)
scaffold0327 (19-85)||(19717-19783)
[»] scaffold0067 (1 HSPs)
scaffold0067 (20-88)||(33774-33842)
[»] scaffold0044 (2 HSPs)
scaffold0044 (18-82)||(81094-81158)
scaffold0044 (18-85)||(64693-64760)
[»] scaffold0991 (1 HSPs)
scaffold0991 (22-85)||(231-294)
[»] scaffold0009 (3 HSPs)
scaffold0009 (20-54)||(70415-70449)
scaffold0009 (22-75)||(71673-71727)
scaffold0009 (91-139)||(163987-164033)


Alignment Details
Target: chr6 (Bit Score: 223; Significance: 1e-123; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 4 - 297
Target Start/End: Original strand, 24588659 - 24588953
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||||| || ||||||||||||   ||||||||||||| ||||||| ||||||||    
T  24588659 ttcctatgtttttccctctcttctccctccttcgacttgtgttaagaagtccttctcctttttctacctttttttgtcccttcagaattaaaagtgtttt 24588758  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24588759 taagaccatatagttcattttcggtatattgtcccttcggaatcaagaatggtcttaagagcataatcccttcaattatttatgtctttttagaataaat 24588858  T
Q  204 aatattttaagatcacagtcc-ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24588859 aatattttaagatcacagtcctttttcggtataataagaatgatcttaaacatatatattcttcttcaattcatggagaagttagatgttagaat 24588953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 11 - 295
Target Start/End: Complemental strand, 8748391 - 8748108
Alignment:
Q  11 gtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagacc 110  Q
    |||||| ||||||||||| ||||||||||||||||||||||||| || ||||||||||||| ||||| |||| |||||||||||||||||| ||||||||    
T  8748391 gttttttcctctcttctccctccttcgacttgtgttgacaagtccttctcctttttctacttctttt-gtccattcggaattaagagtgttcttaagacc 8748293  T
Q  111 atatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattt 210  Q
    |||||||| ||| ||||| |||||  |||||  |||||| |||||||||||||||||||||||||| || ||| || | | |   ||||||||||| |||    
T  8748292 atatagtcacttatcggtttattgatccttcacaatcaataatggtcttaagagcatagtcccttccataattcat-tatctccggaataaataatgttt 8748194  T
Q  211 taagatcacagtcc-ttttaggtataataagaatgatctt-aaacatatatattcttcttcaattcatagagaagttagatgttaga 295  Q
    |||||| | ||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||| | || |||||||||||||||    
T  8748193 taagattatagtccattttcggtataataagaatgatcttaaaacatatatattcttcttcaattc-ttgaaaagttagatgttaga 8748108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 254
Target Start/End: Original strand, 6112253 - 6112509
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagt 117  Q
    ||||||||||| ||| || |||||||||||||||||| || |||||||||||||||||| ||| |||||||||||||||| |||||||||||  ||||||    
T  6112253 cctctcttctccctcatttgacttgtgttgacaagtccttatcctttttctactcctttctgtaccttcggaattaagagcgtttttaagac--tatagt 6112350  T
Q  118 cccttttcggtatattgtcccttcgaaatcaagaa----------------------tggtcttaagagcatagtcccttcaattatttatgtcttttta 195  Q
    |||| |||||| |||||||| |||||||  |||||                      |||||||||||||||||||||||||||| ||||||||| | ||    
T  6112351 ccctattcggtttattgtcctttcgaaaataagaatagtcttaagagcatataagaatggtcttaagagcatagtcccttcaattgtttatgtctctcta 6112450  T
Q  196 gaataaataatattttaagatcacagtccttttaggtataataagaatgatcttaaaca 254  Q
    ||||||||||||||||||||||| ||||||||  | || ||||||||||||||||||||    
T  6112451 gaataaataatattttaagatcatagtcctttctgatacaataagaatgatcttaaaca 6112509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 123 - 295
Target Start/End: Original strand, 2759983 - 2760154
Alignment:
Q  123 ttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcacagt 222  Q
    |||||| |||||||||||||   | ||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||| || |||    
T  2759983 ttcggtttattgtcccttcggttttaagaatggtcttaagagcatagttccctcaattatttatgtctctttagaataaataatattttaagaccatagt 2760082  T
Q  223 cc-ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttaga 295  Q
    || |||| ||||||||||||||||||||||  | ||||||||||||||||||| |  ||| |||| ||||||||    
T  2760083 ccattttcggtataataagaatgatcttaa--aaatatattcttcttcaattcttgaagatgttatatgttaga 2760154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 17964016 - 17964197
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||| ||||||| |    
T  17964016 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtccttctcctttttctactcctttctgtcccttcggaattatgagtgttct 17964114  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtc 189  Q
     ||||||  ||||||| |||||| | || |||||||||| ||| |||||||||||||| | |||||||||||| || || ||||||    
T  17964115 caagacc--atagtcctttttcgttttaatgtcccttcggaattaagaatggtcttaa-aacatagtcccttcgataatatatgtc 17964197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 224
Target Start/End: Complemental strand, 12689536 - 12689393
Alignment:
Q  79 gtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaa 178  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||||||| ||  ||||||||| ||| |||||||||||||| | ||||||||||||||    
T  12689536 gtcccttcggaattaagagtgtttttaagacc--atagtccattttcggtttaacgtcccttcggaattaagaatggtcttaa-aacatagtcccttcaa 12689440  T
Q  179 ttatttatgtctttttagaataaataata-ttttaagatcacagtcc 224  Q
    | || ||||||| || |||||||||| || ||||||||||| |||||    
T  12689439 taatatatgtctcttcagaataaatagtacttttaagatcatagtcc 12689393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 297
Target Start/End: Original strand, 15991235 - 15991421
Alignment:
Q  113 atagtcccttttcggtatattgtcccttcgaaatcaagaatggt---cttaagagcatagtcccttcaattatttatgtctttttagaataaataatatt 209  Q
    |||||| ||||||| | |||||||| ||| |||| |||||||     ||||||||||||||||||  || ||||||||||  || |||||||||||||||    
T  15991235 atagtctcttttcgatttattgtccattcaaaattaagaatgtcgaccttaagagcatagtccctataaatatttatgtcccttaagaataaataatatt 15991334  T
Q  210 ttaagatcacagtcct-tttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||||||| |||||| ||| ||||||||||||||||||||  | |  |||||||||| ||||||  ||||||||||||||||||||||    
T  15991335 ttaagatcatagtcctcttttggtataataagaatgatctt--agaagtatattcttcatcaatttctagagaagttagatgttagaat 15991421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 2077410 - 2077317
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||||||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  2077410 tctcttctctctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagaccata 2077317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 16835690 - 16835786
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||| ||||||||||| |||||||||||  ||||||||||||| || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  16835690 tgtcccttcggatttaagagtgttcttaagaccata--gtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttc 16835786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 22610113 - 22610013
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccc 173  Q
    |||||||||||| ||||||||||||||| |||||||||||   ||||||||||||||| |||| ||||| ||| ||||||||| |||||||||||||| |    
T  22610113 tttttgtcccttaggaattaagagtgttcttaagaccataa--tcccttttcggtataatgtcacttcggaattaagaatggttttaagagcatagtctc 22610016  T
Q  174 ttc 176  Q
    |||    
T  22610015 ttc 22610013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 179
Target Start/End: Original strand, 4156886 - 4156985
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    ||||||||||||||||||| |||| |||||||||||  |||| |||||||| || |||||||||| ||| |||||||||||||| | ||||||| |||||    
T  4156886 tgtcccttcggaattaagattgttcttaagaccata--gtcctttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcacttca 4156983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 175
Target Start/End: Complemental strand, 17914151 - 17914056
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccctt 175  Q
    ||||| |||||| ||||||||||| |||||||||||  |||| |||||| |||| |||||||||| ||| ||||||||||||||| ||||||||||||    
T  17914151 tgtcctttcggatttaagagtgttcttaagaccata--gtccattttcgatataatgtcccttcggaattaagaatggtcttaagtgcatagtccctt 17914056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 16760980 - 16760891
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  16760980 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 16760891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 31477200 - 31477293
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||| ||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  31477200 tctcttctccctcttttgacttgtgtcgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagaccata 31477293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 14509534 - 14509378
Alignment:
Q  79 gtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaa 178  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||||| || || ||| |||||  ||| |||||| ||||||||  |||||||||||| |    
T  14509534 gtcccttcggaattaagagtgttcttaagacc--atagtcccttttcagtttaatgtaccttcagaattaagaatagtcttaagttcatagtcccttcga 14509437  T
Q  179 t-tatttatgtctttttagaataaataatattttaagatcacagtc-cttttaggtataat 237  Q
    | | ||||||||   || | |||||||||| |||||||||| |||| ||||| ||||||||    
T  14509436 tatttttatgtc--cttcgtataaataataatttaagatcatagtctcttttcggtataat 14509378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 11570276 - 11570386
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtccct-tttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||||||||||||||| ||||||||  ||||||||| ||||| | || |||||||||| ||| |||||||||||||| | |||||||| |||    
T  11570276 tgtcccttcggaattaagagtgttcttaagacc--atagtccctctttcgatttaatgtcccttcggaattaagaatggtcttaaaaacatagtccattc 11570373  T
Q  177 aattatttatgtc 189  Q
     || || ||||||    
T  11570374 gataatatatgtc 11570386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 15704407 - 15704499
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | ||||||||||||| || |||||||||||||| ||||||||| |||||||||||    
T  15704407 tctcttctccctcttt-gacttgtgttgacgagtctttcttctttttctactcccttctgtcccttcggaatcaagagtgttcttaagaccata 15704499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 16625014 - 16624925
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || || |||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  16625014 tctcttctccctcttttgaattgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 16624925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 19772508 - 19772601
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | ||||||||||||| || |||||||||| |||||| |||||| |||||||||||    
T  19772508 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcccttctgtcccttcgaaattaaaagtgttcttaagaccata 19772601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 22949830 - 22949741
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| | |||| |||||||    
T  22949830 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaattgttcttaagac 22949741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 22953786 - 22953697
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| | |||| |||||||    
T  22953786 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaattgttcttaagac 22953697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 23872274 - 23872185
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| | |||| |||||||    
T  23872274 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaattgttcttaagac 23872185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 23876230 - 23876141
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| | |||| |||||||    
T  23876230 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaattgttcttaagac 23876141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 2699626 - 2699722
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||||||||||||||| |||| |||  |||||||||||||||| || |||||||||  ||| ||||||  |||||| | ||||||||||||    
T  2699626 tgtcccttcggaattaagagtgttcttaaaacc--atagtcccttttcggtttaatgtcccttcagaattaagaataatcttaaaaacatagtcccttc 2699722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 6407393 - 6407489
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtccc-ttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccctt 175  Q
    |||||||||||| ||||||||||| ||||||||  |||||||| |||||||| || ||| |||||| ||| |||||||||||||| | |||||||||||    
T  6407393 tgtcccttcggatttaagagtgttcttaagacc--atagtccctttttcggtttaatgttccttcggaattaagaatggtcttaaaaacatagtccctt 6407489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 22806949 - 22806856
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||| | |||||| || ||||||||||||||||| |||||| |||||||||||    
T  22806949 tctcttctccctcttttgacttgtgttgacgagtctttcttctttatatactcccttctgtcccttcggaattaaaagtgttcttaagaccata 22806856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 224
Target Start/End: Original strand, 11534235 - 11534384
Alignment:
Q  75 ttttgtcccttcggaattaagagtgtttttaagaccatatagtccct-tttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccc 173  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||||| ||||  | || |||||||||| ||| || ||||||||||| | ||||||||     
T  11534235 ttttgtcccttcggaattaagagtgttcttaagacc--atagtccctctttcaatttaatgtcccttcggaattaaaaatggtcttaaaaacatagtcca 11534332  T
Q  174 ttcaattatttatgtctttttagaataaataata-ttttaagatcacagtcc 224  Q
    ||  || || ||||||  ||  ||||||| |||| ||||||||||| |||||    
T  11534333 tttgataatatatgtcccttaggaataaagaatacttttaagatcatagtcc 11534384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 11559748 - 11559841
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtccct-tttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcc 172  Q
    |||||||||||||||||||||||| ||||||||  ||||||||| ||||  | || |||||||||| ||| |||||||||||||| | ||||||||    
T  11559748 tgtcccttcggaattaagagtgttcttaagacc--atagtccctctttcaatttaatgtcccttcggaattaagaatggtcttaaaaacatagtcc 11559841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 14073735 - 14073668
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| || ||||||||||||||||| |||| || | |||||||||||||||| ||||||||    
T  14073735 cctctcttctcccttcttcgacttgtgttgacgagtctttcttctttttctactcctttctgtccctt 14073668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 175
Target Start/End: Original strand, 20747832 - 20747928
Alignment:
Q  77 ttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccctt 175  Q
    ||||||||||| |||||||| |||| |||||||||||  ||| |||| || |||| |||||||||| ||| ||||||| |||||| | |||||||||||    
T  20747832 ttgtcccttcgaaattaagaatgttcttaagaccata--gtctctttccgatataatgtcccttcggaattaagaatgatcttaaaaacatagtccctt 20747928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 3902209 - 3902136
Alignment:
Q  13 ttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttc 86  Q
    |||| ||||||||||| ||||||||| |||||||||| ||||||| | ||  |||||||||||| |||||||||    
T  3902209 tttttcctctcttctccctccttcgaattgtgttgacgagtcattcttctgcttctactcctttctgtcccttc 3902136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 3902567 - 3902494
Alignment:
Q  13 ttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttc 86  Q
    |||| ||||||||||| || ||||||||||||||||| ||||||| | ||  ||||||| ||||||||||||||    
T  3902567 tttttcctctcttctcccttcttcgacttgtgttgacgagtcattcttctgcttctacttctttttgtcccttc 3902494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 297
Target Start/End: Original strand, 6112683 - 6112726
Alignment:
Q  254 atatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  6112683 atatatattcttcttctattcatggagaagttagatgttagaat 6112726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 18387532 - 18387465
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| || ||||||||| ||||||| |||| || | |||||||||||||||| ||||||||    
T  18387532 cctctcttctcccttcttcgacttctgttgacgagtctttcttctttttctactcctttctgtccctt 18387465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 224
Target Start/End: Original strand, 19994927 - 19995071
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||| || ||||||||||||||||| | ||  |||||| ||| ||||| |||||||||  ||| ||||| ||| |||| | ||||||||||||     
T  19994927 tgtcccttcgaaaataagagtgtttttaagatctta--gtccctattcagtataatgtcccttcagaattaagaaaggttttaaaaacatagtcccttct 19995024  T
Q  178 attatttatgtctttttagaataaataatattttaagatcacagtcc 224  Q
    || || ||||||  || |||||||| | || |||| ||||| |||||    
T  19995025 ataatgtatgtcccttcagaataaagagtactttaggatcatagtcc 19995071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 224
Target Start/End: Original strand, 25313987 - 25314130
Alignment:
Q  80 tcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaat 179  Q
    |||||||||||||||||||||||||||||||  ||||||||||   ||| || || |||||   ||| ||||||| |||||| | |||||||| ||| ||    
T  25313987 tcccttcggaattaagagtgtttttaagacc--atagtcccttgctggtttaatgcccctttcgaattaagaatgatcttaaaaacatagtcctttcgat 25314084  T
Q  180 tatttatgtctttttagaataaataata-ttttaagatcacagtcc 224  Q
     || ||||||  || |||||||| | || ||||||||||| |||||    
T  25314085 aatatatgtcccttcagaataaagagtacttttaagatcatagtcc 25314130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 224
Target Start/End: Original strand, 26201481 - 26201624
Alignment:
Q  80 tcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaat 179  Q
    |||||||||||||||||||||||||||||||  ||||||||||   ||| || || |||||   ||| ||||||| |||||| | |||||||| ||| ||    
T  26201481 tcccttcggaattaagagtgtttttaagacc--atagtcccttgctggtttaatgcccctttcgaattaagaatgatcttaaaaacatagtcctttcgat 26201578  T
Q  180 tatttatgtctttttagaataaataata-ttttaagatcacagtcc 224  Q
     || ||||||  || |||||||| | || ||||||||||| |||||    
T  26201579 aatatatgtcccttcagaataaagagtacttttaagatcatagtcc 26201624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 27324555 - 27324647
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||| ||||| |||| || | ||||| |||||||||| |||| |||||||||||| |||||| |||| ||||||    
T  27324555 tctcttctccctcttttgacttgtattgacgagtctttcttctttt-ctactcctttctgtctcttcggaattaaaagtgttcttaaaaccata 27324647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 12405888 - 12405949
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttc 141  Q
    ||||||||||||| |||||||||| ||||||||   |||||||| ||||||||| |||||||||    
T  12405888 tgtcccttcggaaataagagtgttcttaagacc--ttagtccctattcggtataatgtcccttc 12405949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 14042104 - 14042056
Alignment:
Q  128 tatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||| |||||||||||||| |||||||||||||||| |||||| |||||    
T  14042104 tataatgtcccttcgaaattaagaatggtcttaagaacatagttccttc 14042056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 33687181 - 33687261
Alignment:
Q  80 tcccttcggaattaagagtgtttttaagaccatatagtccc-ttttcggtatattgtcccttcgaaatcaagaatggtcttaa 161  Q
    ||||||| ||||||||||| || ||||||||  |||||||| |||||||| || |||||||||| ||| ||| ||||||||||    
T  33687181 tcccttcagaattaagagtcttcttaagacc--atagtccctttttcggtttaatgtcccttcgcaattaagtatggtcttaa 33687261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 174
Target Start/End: Complemental strand, 11428522 - 11428427
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtccc-ttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccct 174  Q
    ||||||||| ||||| |||||||| ||||||||  |||||||| |||||||| || ||| |||||| ||| || |||| |||||| | ||||||||||    
T  11428522 tgtcccttccgaattgagagtgttcttaagacc--atagtccctttttcggtttaatgttccttcggaattaataatgatcttaaaaacatagtccct 11428427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 22694844 - 22694939
Alignment:
Q  82 ccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaat 179  Q
    |||||| ||||||||||||| ||||||||   |||||||| ||||||||| ||||||||   ||| ||||| |||||||| | |||||| | ||||||    
T  22694844 ccttcgaaattaagagtgttcttaagacc--ttagtccctattcggtataatgtcccttaagaattaagaaaggtcttaaaaacatagttcattcaat 22694939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 29325821 - 29325759
Alignment:
Q  24 ttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttc 86  Q
    ||||| |||||||||||||||||||| |||| || | ||  |||||||||||| |||||||||    
T  29325821 ttctccctccttcgacttgtgttgacgagtccttcttctgcttctactcctttctgtcccttc 29325759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 166
Target Start/End: Complemental strand, 14575250 - 14575165
Alignment:
Q  80 tcccttcggaattaagagtgtttttaagaccatatagtcccttttcgg-tatattgtcccttcgaaatcaagaatggtcttaagagca 166  Q
    ||||||| || ||||||||||| |||||||||||  ||| |||||  | |||| ||||||||| ||||  ||||||||||||||||||    
T  14575250 tcccttcagacttaagagtgttgttaagaccata--gtctctttttagatatagtgtcccttcaaaatttagaatggtcttaagagca 14575165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 211; Significance: 1e-115; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 4 - 297
Target Start/End: Original strand, 12044616 - 12044909
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||| || ||||||||||||||| |    
T  12044616 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtccttctcctttttctactcctttctgtccttttggaattaagagtgttct 12044714  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||     
T  12044715 taagaccatatagtcccttgtcgatatattgtcccttcggaatcaagaatggtcataagagcatagtcccttcaattatttatgtccttttagaataaag 12044814  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12044815 aatattttaagatcatagtcccttttcggtataataagaatgatcttaaacatatatattcttcttcaattcatggagaagttagatgttagaat 12044909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 4 - 297
Target Start/End: Original strand, 6154890 - 6155183
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||| | ||||||||| ||| ||||||||||||||||||||| || |||||||||||||| ||||||| |||||||||||||||||||| |    
T  6154890 ttcctgtgttttttcttctcttctccctctttcgacttgtgttgacaagtccttctcctttttctactcttttttgttccttcggaattaagagtgttct 6154989  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    ||||||||||||||||||| ||||| |||||  |||||  |||||| |||||||||||||||||||||||||| || | | || ||| ||  ||||||||    
T  6154990 taagaccatatagtcccttgtcggtttattgatccttcagaatcaataatggtcttaagagcatagtcccttcgataaatcat-tctcttcggaataaat 6155088  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||| ||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6155089 aatgttttaagatcatagtcccttttcggtataataagaatgatcttaaacatatatattcttcttcaattcatggagaagttagatgttagaat 6155183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 19 - 297
Target Start/End: Complemental strand, 3666514 - 3666235
Alignment:
Q  19 ctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtc 118  Q
    |||||||||| ||| ||||||||||||||||||||| || ||||||||||| |||||| ||||||||  |||||||||||||| |||| |||||||||||    
T  3666514 ctctcttctccctcattcgacttgtgttgacaagtccttctcctttttctattcctttctgtccctttcgaattaagagtgttcttaaaaccatatagtc 3666415  T
Q  119 ccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatca 218  Q
    | || ||||| |||| |||||| | |||||||||||||||| |||||||||||| |||||||||||| |||| |||||||||||||||||||||| ||||    
T  3666414 ctttgtcggtctattatccctttggaatcaagaatggtcttgagagcatagtcctttcaattatttacgtctctttagaataaataatattttaatatca 3666315  T
Q  219 cagtc-cttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
     ||||  ||||  ||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  3666314 tagtcttttttcagtataataagaatgatcttaaacatatatattcttcttccattcttggagaagttagatgttagaat 3666235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 4 - 297
Target Start/End: Original strand, 36941746 - 36942036
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||  || |||||||||||||||||| |||||||||||||||||||||||| |    
T  36941746 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagttcttctcctttttctactcctttctgtcccttcggaattaagagtgttct 36941844  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    ||||| |  |||||||||||||||| || |||||||||| ||| |||||||||||||| |||||||||||||| || ||| || ||| ||  ||||||||    
T  36941845 taagatc--atagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaacagcatagtcccttcgataattcat-tctcttcggaataaat 36941941  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||| ||||||||||| ||| |||||| | |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  36941942 aatgttttaagatcatagtcccttttcgatataataagaatgatcttaaacatatatattcttcttcaactcatggagaagttagatgttagaat 36942036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 4 - 297
Target Start/End: Complemental strand, 557309 - 557019
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||  || |||||||||||||||||| |||||||||||||||||||||||| |    
T  557309 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagttcttctcctttttctactcctttctgtcccttcggaattaagagtgttct 557211  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  |||||||||||||||| || |||||||||| ||| |||||||||||||||| |||||||||||  || | | || ||| ||  ||||||||    
T  557210 taagacc--atagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaagaacatagtccctttgataaatcat-tctcttcggaataaat 557114  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||| |||||| |||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  557113 aatgttttaatatcatagtcccttttcggtataataagaatgatcttaaacatatatattcttcttcaattcatggagaagttggatgttagaat 557019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 4 - 297
Target Start/End: Original strand, 36936992 - 36937282
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||  || |||||||||||||||||| |||||||||||||||||||||  | |    
T  36936992 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagttcttctcctttttctactcctttctgtcccttcggaattaagagtaatct 36937090  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  |||||||||||||||| || |||||||||| ||| |||||||||||||| |||||||||||||| || ||| || ||| ||  ||||||||    
T  36937091 taagacc--atagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaacagcatagtcccttcgataattcat-tctcttcggaataaat 36937187  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||| ||||||||||| ||| |||||| | |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  36937188 aatgttttaagatcatagtcccttttcgatataataagaatgatcttaaacatatatattcttcttcaactcatggagaagttagatgttagaat 36937282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 4 - 297
Target Start/End: Complemental strand, 562081 - 561791
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||  || |||||||||||||||||| |||||||||||||||||||||||| |    
T  562081 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagttcttctcctttttctactcctttctgtcccttcggaattaagagtgttct 561983  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  |||||||||||||||| || |||||||||| ||| |||||||||||||||| |||||||||||  || | | || ||| ||  ||||||||    
T  561982 taagacc--atagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaagaacatagtccctttgataaatcat-tctcttcggaataaat 561886  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||| |||||| |||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||    
T  561885 aatgttttaatatcatagtcccttttcggtataataagaatgatcttaaacatatatattcttcttcaattcatggagaagttggatgtcagaat 561791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 4 - 297
Target Start/End: Original strand, 32461025 - 32461318
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||| || |    
T  32461025 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtccttctcctttttctactcctttctgtcccttcggaattaagagtattct 32461123  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    ||||||||||||||||||| ||||| |||||  |||||| |||||| |||||||||||||||||||||||||| || ||| || ||| ||  ||| ||||    
T  32461124 taagaccatatagtcccttgtcggtttattgatccttcggaatcaataatggtcttaagagcatagtcccttcgataattcat-tctcttcggaacaaat 32461222  T
Q  204 aatatttt-aagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||| |||| ||||||| ||| ||||||  |||||||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||||||    
T  32461223 aatgttttaaagatcatagtcccttttcagtataataagaatgatcttaaacatatatattcttcttcaattcttgaataagttagatgttagaat 32461318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 20 - 297
Target Start/End: Complemental strand, 41997262 - 41996984
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcc 119  Q
    ||||||||| |||||| |||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  41997262 tctcttctccctcctttgacttgtgttgacaagtccttctcctttttctactcctttctgtcccttcggaattaagagtgttcttaagaccatatagtcc 41997163  T
Q  120 cttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataat-attttaagatca 218  Q
    ||| ||||| |||||  | |||| |||||| ||||||||||||| |||||||||||  || ||| || |||  |  |||||||||||  |||||||||||    
T  41997162 cttgtcggtttattgatcattcggaatcaataatggtcttaagaacatagtccctttgataattcat-tctcgtcggaataaataatgtttttaagatca 41997064  T
Q  219 cagtc-cttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
     |||| ||||| | |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  41997063 tagtcgcttttcgatataataagaatgatcttaaacatatatattcttcttcaactcatggagaagttagatgttagaat 41996984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 20 - 297
Target Start/End: Complemental strand, 42002031 - 42001753
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcc 119  Q
    ||||||||| |||||| |||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  42002031 tctcttctccctcctttgacttgtgttgacaagtccttctcctttttctactcctttctgtcccttcggaattaagagtgttcttaagaccatatagtcc 42001932  T
Q  120 cttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataat-attttaagatca 218  Q
    ||| ||||| |||||  | |||| |||||| ||||||||||||| |||||||||||  || ||| || |||  |  |||||||||||  |||||||||||    
T  42001931 cttgtcggtttattgatcattcggaatcaataatggtcttaagaacatagtccctttgataattcat-tctcgtcggaataaataatgtttttaagatca 42001833  T
Q  219 cagtc-cttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
     |||| ||||| | |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  42001832 tagtcgcttttcgatataataagaatgatcttaaacatatatattcttcttcaactcatggagaagttagatgttagaat 42001753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 18 - 297
Target Start/End: Original strand, 13300984 - 13301260
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttt-tctactcctttttgtcccttcggaattaagagtgtttttaagaccatatag 116  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||| ||||||||||| |||||||||||||||||||||||| ||||||||  ||||    
T  13300984 cctctcttctccctccttcgacttgtgttgacaagtcgttctccttttttctactcctttctgtcccttcggaattaagagtgttcttaagacc--atag 13301081  T
Q  117 tcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagat 216  Q
    ||| |  ||||| |||| ||| |||| ||  ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  13301082 tccatcgtcggtttattatcctttcggaaataagaatggtcttaagagcatagtcccttcaattatt--tgtctctttagaataaataatattttaagat 13301179  T
Q  217 cacagtcc--ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||  ||||  |||| ||||||||||  ||||||||||  ||||||||||||||||||||| | |||||||| |||||||||||    
T  13301180 catggtccctttttcggtataataaagatgatcttaa--atatatattcttcttcaattcttggagaagttggatgttagaat 13301260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 18 - 297
Target Start/End: Complemental strand, 31732137 - 31731860
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagt 117  Q
    ||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| |||||||||||  ||    
T  31732137 cctctcttctccctccttcgacttgtgttgacaagtcgttctcctttttctactcctttctgtcccttcggaattaagagtgttcttaagaccata--gt 31732040  T
Q  118 cccttttcggtatattgtcccttc-gaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagat 216  Q
    || |    ||| |||| ||| ||| ||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  31732039 ccatcgctggtttattatcctttcagaaat-aagaatggtcttaagagcatagccccttcaattatttatgtctctttagaataaataatattttaagat 31731941  T
Q  217 cacagtcc--ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||  ||||  |||| ||||||||||   |||||||||  ||||||||||||||||||||| | |||||||| |||||||||||    
T  31731940 catggtccctttttcggtataataaaggtgatcttaa--atatatattcttcttcaattcttggagaagttggatgttagaat 31731860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 18 - 297
Target Start/End: Original strand, 21323470 - 21323747
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagt 117  Q
    ||||||||||| ||||||||||||| ||||||||||| || || |||||||||||||||  ||||||||| ||||||||||||| |||||| ||||  ||    
T  21323470 cctctcttctccctccttcgacttgggttgacaagtccttctcatttttctactcctttccgtcccttcgaaattaagagtgttcttaagatcata--gt 21323567  T
Q  118 cccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatc 217  Q
    || |  ||| | |||| ||| |||| ||  |||||||||||| |||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||    
T  21323568 ccatcatcgatttattatcctttcggaaataagaatggtctttagagcatagtccgttcaattatttatgtctctttagaataaatcatattttaagatc 21323667  T
Q  218 acag--tccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |  |  || |||| ||||||||||  ||||||||||  ||||||||||||||||||||| | ||||||||||||||||||||    
T  21323668 atggtctctttttcggtataataatgatgatcttaa--atatatattcttcttcaattcttggagaagttagatgttagaat 21323747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 48 - 297
Target Start/End: Original strand, 23977103 - 23977361
Alignment:
Q  48 acaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatc 147  Q
    ||||||| || |||||||||||||| ||| | |||||||||||||||||||||| |||||||||||  |||| |  ||||| |||| | | |||||||      
T  23977103 acaagtccttctcctttttctactc-tttctatcccttcggaattaagagtgttcttaagaccata--gtccatcgtcggtttattattctttcgaaaat 23977199  T
Q  148 aagaatggt----------cttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcacagtccttttaggtataat 237  Q
    |||||||||          |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||  ||| |||| |||| |||    
T  23977200 aagaatggttttaagagctcttaagagcatagtcccttcaattgtttatgtctctttagaataaataatattttaagatcatggtctttttcggtacaat 23977299  T
Q  238 aagaatgatcttaa--acatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||||||||||||  |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  23977300 aagaatgatcttaaacacatatattttcttcttctattcatagagaagttaaatgttagaat 23977361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 4 - 224
Target Start/End: Original strand, 29167430 - 29167647
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||| || | |||||||||||||||| |||||||||||||||||||||||| |    
T  29167430 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtccttcttctttttctactcctttctgtcccttcggaattaagagtgttct 29167528  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  |||||||||||||||| || |||||||||| ||| |||||||||||||| | ||| |||||||| || || ||||||  || ||||||||     
T  29167529 taagacc--atagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaa-aacattgtcccttcgataatatatgtcccttcagaataaag 29167625  T
Q  204 aata-ttttaagatcacagtcc 224  Q
    | || ||||||||||| |||||    
T  29167626 agtacttttaagatcatagtcc 29167647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 36424268 - 36424122
Alignment:
Q  13 ttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccat 112  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||| ||||||||      
T  36424268 tttttcctctcttctccctcattcgacttgtgttgacaagtcattctcctttttctactcctttctgtcccttcggaattaagactgttcttaagacc-- 36424171  T
Q  113 atagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaa 161  Q
    |||||||||||||||| || |||||||||| ||| ||||||||||||||    
T  36424170 atagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaa 36424122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 7452376 - 7452222
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcc 119  Q
    ||||||||| |||||||||||||||| |||||||| || |||||||||||||||||| ||||||||||||| ||||||| || ||||||||  || ||||    
T  7452376 tctcttctccctccttcgacttgtgtggacaagtccttctcctttttctactcctttctgtcccttcggaaataagagttttcttaagacc--attgtcc 7452279  T
Q  120 cttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    ||||||||| || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  7452278 cttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttc 7452222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 224
Target Start/End: Original strand, 37549624 - 37549826
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcc 119  Q
    |||||||||  |||||||||||||||||||||||| || |||||||||||||||||| |||||||| |||| |||||||||| ||||||||  |||||||    
T  37549624 tctcttctccttccttcgacttgtgttgacaagtccttctcctttttctactcctttctgtccctttggaaataagagtgttcttaagacc--atagtcc 37549721  T
Q  120 cttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataata-ttttaagatca 218  Q
    ||||||||| || |||||||||| ||| |||||||||||| | | |||||||| ||| || || ||||||  || |||||||| | || |||||||||||    
T  37549722 cttttcggtttaatgtcccttcggaattaagaatggtcttga-aacatagtccattcgataatatatgtcccttcagaataaagagtacttttaagatca 37549820  T
Q  219 cagtcc 224  Q
     |||||    
T  37549821 tagtcc 37549826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 37652422 - 37652559
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcc 119  Q
    |||||||||  |||||||||||||||||||||||| || |||||||||||||||||| |||||||| |||| |||||||||| ||||||||  |||||||    
T  37652422 tctcttctccttccttcgacttgtgttgacaagtccttctcctttttctactcctttctgtccctttggaaataagagtgttcttaagacc--atagtcc 37652519  T
Q  120 cttttcggtatattgtcccttcgaaatcaagaatggtctt 159  Q
    ||||||||| || |||||||||| ||| ||||||||||||    
T  37652520 cttttcggtttaatgtcccttcggaattaagaatggtctt 37652559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 224
Target Start/End: Complemental strand, 26667916 - 26667694
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttg-----acaagtcattttcctttttctactcctttttgtcccttcggaattaagagt 98  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||     ||||||  || ||||||||||||| |||| |||||||||||||||||||||    
T  26667916 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgtgttgacaagttcttctcctttttctacttctttctgtcccttcggaattaagagt 26667818  T
Q  99 gtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaa 198  Q
    ||| ||||||||  |||||||||||||||| || |||||||||| ||| |||||||||||||| | |||||||||||  || || ||||||  || ||||    
T  26667817 gttcttaagacc--atagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaa-aacatagtccctttgataatatatgtcccttcagaa 26667721  T
Q  199 taaataata-ttttaagatcacagtcc 224  Q
    |||| | || ||||||||||| |||||    
T  26667720 taaagagtacttttaagatcatagtcc 26667694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 224
Target Start/End: Complemental strand, 26939513 - 26939291
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttg-----acaagtcattttcctttttctactcctttttgtcccttcggaattaagagt 98  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||     ||||||  || ||||||||||||| |||| |||||||||||||||||||||    
T  26939513 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgtgttgacaagttcttctcctttttctacttctttctgtcccttcggaattaagagt 26939415  T
Q  99 gtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaa 198  Q
    ||| ||||||||  |||||||||||||||| || |||||||||| ||| |||||||||||||| | |||||||||||  || || ||||||  || ||||    
T  26939414 gttcttaagacc--atagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaa-aacatagtccctttgataatatatgtcccttcagaa 26939318  T
Q  199 taaataata-ttttaagatcacagtcc 224  Q
    |||| | || ||||||||||| |||||    
T  26939317 taaagagtacttttaagatcatagtcc 26939291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 1429732 - 1429801
Alignment:
Q  151 aatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcaca 220  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||    
T  1429732 aatggtcttaagagcatagtcccttcaattatttatgtctcttcagaataaataatatattaagatcaca 1429801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 166 - 299
Target Start/End: Complemental strand, 9911600 - 9911466
Alignment:
Q  166 atagtcccttcaattatttatgtctttttagaataaataatattttaagatcacagtc-ctttta-ggtataataagaatgatcttaaacatatatattc 263  Q
    ||||||||||||||||||||||||| || ||||||||||||||||  | |||| |||| |||||  |||||||| | |||||||||||| | ||||||||    
T  9911600 atagtcccttcaattatttatgtctcttcagaataaataatatttata-atcatagtctcttttccggtataattataatgatcttaaaaaaatatattc 9911502  T
Q  264 ttcttcaattcatagagaagttagatgttagaataa 299  Q
    ||||||||||| | |||||||| || ||||||||||    
T  9911501 ttcttcaattcttggagaagttcgacgttagaataa 9911466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 40148461 - 40148323
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||| || |||||||||  ||| |||||||||||||| | ||||||||||||     
T  40148461 tgtcccttcggaattaagagtgttcttaagacc--atagtcccttttcggtttaatgtcccttcagaattaagaatggtcttaa-aacatagtcccttcg 40148365  T
Q  178 attatttatgtctttttagaataaataata-ttttaagatca 218  Q
    || || ||||||  || |||||||| | || |||||||||||    
T  40148364 ataatatatgtcccttcagaataaaaagtacttttaagatca 40148323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 78 - 237
Target Start/End: Complemental strand, 39518962 - 39518803
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatat-tgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||||| ||||||||| |||||||||||  |||||| |||||| ||  |||||||||| ||| |||||||||||||||  ||||||||||||    
T  39518962 tgtcccttcggaataaagagtgttcttaagaccata--gtccctattcggtttaaatgtcccttcggaattaagaatggtcttaagttcatagtcccttc 39518865  T
Q  177 aat-tatttatgtctttttagaataaataatattttaagatcacagt-ccttttaggtataat 237  Q
     || | ||||||||  ||  |||||||||||| |||||||||| ||| |||||| ||||||||    
T  39518864 gatatttttatgtc-cttcggaataaataataatttaagatcatagtcccttttcggtataat 39518803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 78 - 237
Target Start/End: Complemental strand, 39523601 - 39523442
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatat-tgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||||| ||||||||| |||||||||||  |||||| |||||| ||  |||||||||| ||| |||||||||||||||  ||||||||||||    
T  39523601 tgtcccttcggaataaagagtgttcttaagaccata--gtccctattcggtttaaatgtcccttcggaattaagaatggtcttaagttcatagtcccttc 39523504  T
Q  177 aat-tatttatgtctttttagaataaataatattttaagatcacagt-ccttttaggtataat 237  Q
     || | ||||||||  ||  |||||||||||| |||||||||| ||| |||||| ||||||||    
T  39523503 gatatttttatgtc-cttcggaataaataataatttaagatcatagtcccttttcggtataat 39523442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 36429285 - 36429194
Alignment:
Q  69 actcctttt-tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaa 161  Q
    ||||||||| |||||||||||||||||||||||| ||||||||  |||||||||||||| | || |||||||||| ||| ||||||||||||||    
T  36429285 actccttttctgtcccttcggaattaagagtgttcttaagacc--atagtcccttttcgttttaatgtcccttcggaattaagaatggtcttaa 36429194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 10754048 - 10753959
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  10754048 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 10753959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 9726285 - 9726393
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||| || |||||||||  ||| |||||||||||||| | ||||||||||||     
T  9726285 tgtcccttcggaattaagagtgttcttaagacc--gtagtcccttttcggtttaatgtcccttcagaattaagaatggtcttaa-aacatagtcccttcg 9726381  T
Q  178 attatttatgtc 189  Q
    || || ||||||    
T  9726382 ataatatatgtc 9726393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 229
Target Start/End: Complemental strand, 23688659 - 23688510
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||| ||||||||| ||| ||||||||||| |   ||||||||||||| ||||| | || ||| ||||||||||||||||||||| ||| |||     
T  23688659 tgtcccttcgaaattaagagagttcttaagaccatagaa--ccttttcggtataatgtccgtccggaattaagaatggtcttaagagcatattcctttcg 23688562  T
Q  178 attatttatgtctttttagaataaataatattttaagatcacagtcctttta 229  Q
    || || ||||||  ||  ||||||| | ||||||||||||||| ||| ||||    
T  23688561 atgatatatgtcccttcggaataaagactattttaagatcacaatcccttta 23688510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 224
Target Start/End: Original strand, 37248332 - 37248478
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtccc-ttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||| ||||||||||| ||||||||  |||||||| |||||||| || |||||||||  ||| ||||||| |||||| | ||||||||||||    
T  37248332 tgtcccttcggatttaagagtgttcttaagacc--atagtccctttttcggtttaatgtcccttcagaattaagaatgatcttaaaaacatagtcccttc 37248429  T
Q  177 aattatttatgtctttttagaataaataata-ttttaagatcacagtcc 224  Q
     || || ||||||  || |||||||| | || ||||||||||| |||||    
T  37248430 gataatatatgtcccttcagaataaagagtacttttaagatcatagtcc 37248478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 20180690 - 20180769
Alignment:
Q  80 tcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaa 161  Q
    |||||||||||||||||||||| ||||||||  ||||||||| |||||| || ||||||||| |||| ||||||| ||||||    
T  20180690 tcccttcggaattaagagtgttcttaagacc--atagtccctgttcggtttaatgtcccttcaaaattaagaatgatcttaa 20180769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 80 - 176
Target Start/End: Original strand, 35679421 - 35679518
Alignment:
Q  80 tcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttc-ga--aatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||||||||||||| | ||||||  |||||||||||||||| || ||||||||| ||  ||| |||||||||||||| | ||||||||||||    
T  35679421 tcccttcggaattaagagtgttctaaagacc--atagtcccttttcggtttaatgtcccttcagaataattaagaatggtcttaaaaacatagtcccttc 35679518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 36430249 - 36430173
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtc 81  Q
    ||||| ||||||||| |||||| || ||||||||||||||||||||||||| || |||||||||||||| ||| ||||    
T  36430249 ttcctgtgtttttcc-tctcttttccctccttcgacttgtgttgacaagtccttctcctttttctactcttttctgtc 36430173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 174
Target Start/End: Original strand, 6513445 - 6513540
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccct 174  Q
    ||||||||| |||||||||||||| ||||||||| ||  |||  ||||||| || |||||||||||||| ||||||| |||||| | ||||||||||    
T  6513445 tgtcccttcagaattaagagtgttattaagaccacatt-tcctatttcggtttaatgtcccttcgaaattaagaatgatcttaaaaacatagtccct 6513540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 176
Target Start/End: Complemental strand, 4872464 - 4872368
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||| || ||||  |||  |||  |||||| |||||||  ||||||||||||    
T  4872464 tgtcccttcggaattaagagtgttcttaagacc--atagtcccttttcggtttaatgtcttttcagaattcagaatgatcttaagttcatagtcccttc 4872368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 224
Target Start/End: Original strand, 23757347 - 23757489
Alignment:
Q  81 cccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaatt 180  Q
    |||||||||| ||||||| || |||||||| ||  |||||  ||||||||| |||| ||||| ||| | ||| |||||||| | |||||||||||| ||     
T  23757347 cccttcggaaataagagttttcttaagacctta--gtcccaattcggtataatgtcacttcggaattatgaaaggtcttaaaaacatagtcccttcgata 23757444  T
Q  181 atttatgtctttttagaataaataata-ttttaagatcacagtcc 224  Q
    || ||||||  ||  ||||||||| || ||||||||||| |||||    
T  23757445 atgtatgtcccttgggaataaatagtacttttaagatcatagtcc 23757489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 224
Target Start/End: Original strand, 23822803 - 23822945
Alignment:
Q  81 cccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaatt 180  Q
    |||||||||| ||||||| || |||||||| ||  |||||  ||||||||| |||| ||||| ||| | ||| |||||||| | |||||||||||| ||     
T  23822803 cccttcggaaataagagttttcttaagacctta--gtcccaattcggtataatgtcacttcggaattatgaaaggtcttaaaaacatagtcccttcgata 23822900  T
Q  181 atttatgtctttttagaataaataata-ttttaagatcacagtcc 224  Q
    || ||||||  ||  ||||||||| || ||||||||||| |||||    
T  23822901 atgtatgtcccttgggaataaatagtacttttaagatcatagtcc 23822945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 41096996 - 41096931
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||    
T  41096996 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtccctt 41096931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 21826823 - 21826756
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| ||  |||||||||| ||||| |||| || | |||||||||||||||| ||||||||    
T  21826823 cctctcttctccctttttcgacttgtcttgacgagtctttcttctttttctactcctttctgtccctt 21826756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 16115758 - 16115853
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcgg-tatattgtcccttcgaaatcaagaatggtcttaagagcatagt 170  Q
    ||||||| | ||| |||||||||||||| ||||||||  ||| ||||||||||| |||| |||||||| ||| | ||||||||||  ||||| |||||    
T  16115758 tttttgttctttcagaattaagagtgttcttaagacc--ataatcccttttcggttataatgtccctttgaagttaagaatggtccgaagagaatagt 16115853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 12103591 - 12103530
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttc 141  Q
    |||||||||||||||||||||||  ||||||||  ||||| |||||||||| || | |||||||    
T  12103591 tgtcccttcggaattaagagtgtacttaagacc--atagttccttttcggtttaatatcccttc 12103530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 13 - 297
Target Start/End: Complemental strand, 8076655 - 8076370
Alignment:
Q  13 ttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccat 112  Q
    |||| |||||||||||||||||| |||||||||||||||||| || ||||||||||||| |||| |||||||||||||||||||||||| |||||| |||    
T  8076655 tttttcctctcttctctctccttagacttgtgttgacaagtccttctcctttttctacttctttctgtcccttcggaattaagagtgttcttaagagcat 8076556  T
Q  113 atagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatatttta 212  Q
    |||||| ||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8076555 atagtctcttgtcgatatattgtcccttcgaaatcaagaatgatcttaagagcatagtcccttcaattatttatgtctttttagaataaataatatttta 8076456  T
Q  213 agatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||    
T  8076455 agatcatagtcccttttcggtataataagaatgatcttaaacatatatattcttcttcaattcctaaagaagttagatgttcgaat 8076370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 4 - 297
Target Start/End: Original strand, 9650441 - 9650733
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||  ||||||||||||||||||||||| |    
T  9650441 ttcctgtgttttttcctctcttctccctccttcgacttgtgttgacaagtc-ttctcctttttctactcctttccgtcccttcggaattaagagtgttct 9650539  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    ||||||||||||||||||| | | |||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  9650540 taagaccatatagtcccttgtagatatattttcccttcggaatcaagaatggtcttaagagcatag-cccctcaattatttatgtctttttagaataaat 9650638  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||||||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  9650639 aatattttaagatcatagtcccttttcggtataataagaatggtcttaaacatatatattcttcttcaattcttgaagaagttagatgttagaat 9650733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 50 - 294
Target Start/End: Complemental strand, 23866641 - 23866396
Alignment:
Q  50 aagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaa 149  Q
    ||||| || ||||||||||||||||||  || |||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  23866641 aagtccttctcctttttctactcctttccgttccttcggaattaagagtgttcttaagaccatatagtcccttgtcgatatattgtcccttcggaatcaa 23866542  T
Q  150 gaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcacagt-ccttttaggtataataagaatgatct 248  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  23866541 gaatagtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcatagtcccttttcggtataataagaatgatct 23866442  T
Q  249 taaacatatatattcttcttcaattcatagagaagttagatgttag 294  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||    
T  23866441 taaacatatatattcttcttcaattcttgaagaagttagatgttag 23866396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 80 - 297
Target Start/End: Complemental strand, 9008697 - 9008480
Alignment:
Q  80 tcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaat 179  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  9008697 tcccttcggaattaagagtattcttaagaccatatagtcctttttcagtatatcgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcagt 9008598  T
Q  180 tatttatgtctttttagaataaataatattttaagatcacagt--ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcata 277  Q
    ||||  ||||| ||||||||||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  9008597 tatt--tgtctctttagaataaataatattttaagatcatagtcccctttttggtataataagaatgatcttaaacatatatattcttcttcaattcatg 9008500  T
Q  278 gagaagttagatgttagaat 297  Q
    ||||||||||||||||||||    
T  9008499 gagaagttagatgttagaat 9008480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 18 - 297
Target Start/End: Complemental strand, 19640899 - 19640622
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagt 117  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| | | ||||||| | ||||||||||| ||||||||||| |      
T  19640899 cctctcttctccctccttcgacttgtgttgacaagtcattctcctttttctactccttct-gccccttcg-agttaagagtgttcttaagaccataga-- 19640804  T
Q  118 cccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatc 217  Q
    ||||||||||| |||||||| ||| |||  |||||||||||||| | |||||||||| | ||| ||||||||| ||||||||||||||||||||| ||||    
T  19640803 cccttttcggtttattgtcctttcaaaactaagaatggtcttaaaaacatagtccctactattgtttatgtctctttagaataaataatattttatgatc 19640704  T
Q  218 acagtccttttaggtataataagaatgatcttaaacatat--atattcttcttcaattcatagagaagttagatgttagaat 297  Q
    | ||||||||| ||||||||||||||||||||||||||||  |||||||||||  ||||||  |||||||||||||||||||    
T  19640703 atagtccttttcggtataataagaatgatcttaaacatatatatattcttcttttattcatgaagaagttagatgttagaat 19640622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 18 - 297
Target Start/End: Complemental strand, 27256837 - 27256559
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttccttttt-ctactcctttttgtcccttcggaattaagagtgtttttaagaccatatag 116  Q
    ||||||||||| ||||||| ||||||||||||||||| || |||||||| |||||||||| ||||||||| |||||||||||||| |||||||||||  |    
T  27256837 cctctcttctccctccttcaacttgtgttgacaagtccttctccttttttctactcctttctgtcccttcagaattaagagtgttcttaagaccata--g 27256740  T
Q  117 tcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagat 216  Q
    ||| |  ||||| |||| ||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27256739 tccatcgtcggtttattatcctttcggaaataagaatggtcttaagagcatagtcccttcaattatttatgtctctttagaataaataatattttaagat 27256640  T
Q  217 cacagtcc--ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||  ||||  |||| ||||||||||  ||||||||||  ||||||||||||||||||||| | ||||| || |||||||||||    
T  27256639 catggtccctttttcggtataataaagatgatcttaa--atatatattcttcttcaattcttggagaaattggatgttagaat 27256559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 18 - 297
Target Start/End: Original strand, 40864857 - 40865134
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttccttttt--ctactcctttttgtcccttcggaattaagagtgtttttaagaccatata 115  Q
    ||||||||||| ||||||||||||||||||||||||| || || |||||  |||||||||| |||||||||||||||||||||||| |||||||||||      
T  40864857 cctctcttctccctccttcgacttgtgttgacaagtccttctcttttttttctactcctttctgtcccttcggaattaagagtgttcttaagaccata-- 40864954  T
Q  116 gtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaaga 215  Q
    |||| |  ||||| |||| ||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  40864955 gtccatcgtcggtttattatcctttcggaaataagaatggtcttaagagcatagtcccttcaattatttatgtctctttagaaaaaataatattctaaga 40865054  T
Q  216 tcacagtcc--ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |||  ||||  |||| ||||||||||  ||||||||||    ||||||||||||||||||| | ||||||||  ||||||||||    
T  40865055 tcatggtccctttttcggtataataaagatgatcttaa----atatattcttcttcaattcttggagaagttgaatgttagaat 40865134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 44509851 - 44510073
Alignment:
Q  1 tgtttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgt 100  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||| ||||||||| |||||||||||||    
T  44509851 tgtttcctgtgttttttcctctcttctctctccttcgacttgtgttgacaagtccttctcctttttctacttctttatgtcccttcagaattaagagtgt 44509950  T
Q  101 ttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaata 200  Q
    | ||||||||||||  | |||| |||||||||||  ||||||||||||| |||||||||||||||||||||||||| || ||| || ||| ||  |||||    
T  44509951 tcttaagaccatattattccttgtcggtatattgatccttcgaaatcaataatggtcttaagagcatagtcccttcgataattcat-tctcttcggaata 44510049  T
Q  201 aataatattttaagatcacagtcc 224  Q
    |||||| ||||||||||| |||||    
T  44510050 aataatgttttaagatcatagtcc 44510073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 26341845 - 26341691
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| |    
T  26341845 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtccttctcctttttctactcctttctgtcccttcggaattaagagtgttct 26341747  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaa 161  Q
    |||||||  ||| |||||||||||| || |||||||||| ||| ||||||||||||||    
T  26341746 taagacc--ataatcccttttcggtttaatgtcccttcggaattaagaatggtcttaa 26341691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 142
Target Start/End: Complemental strand, 47102152 - 47102015
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||| || ||||||||||||||| ||  ||||||||||||||||||||||| |    
T  47102152 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtccttctcctttttctactcccttccgtcccttcggaattaagagtgttct 47102054  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcg 142  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  47102053 taagaccatatagtcccttgtcgatatattgtcccttcg 47102015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 42626120 - 42626258
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||||||| ||||||||| |||||||||||  ||||||||||||| || ||||||| || ||| |||||||||||||| | |||||||||||||    
T  42626120 tgtcccttcggaatcaagagtgttcttaagaccata--gtcccttttcggtttaatgtccctccggaattaagaatggtcttaa-aacatagtcccttca 42626216  T
Q  178 attatttatgtctttttagaataaataata-ttttaagatca 218  Q
    || || ||||||  || |||||||| | || |||||||||||    
T  42626217 ataatatatgtcccttcagaataaagagtacttttaagatca 42626258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 14259604 - 14259511
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | ||||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  14259604 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcccttctgtcccttcggaattaagagtgttcttaagaccata 14259511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 18426525 - 18426432
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  18426525 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagaccata 18426432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 20485185 - 20485092
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| |||| |||||||||||||||| |||||||||||||||||  ||||| |||||||||||    
T  20485185 tctcttctccctcttttgacttgtgttgacgagtcttttttctttttctactcctttctgtcccttcggaattaaatgtgttcttaagaccata 20485092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 20488546 - 20488453
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  20488546 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagaccata 20488453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 45169427 - 45169520
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  45169427 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagaccata 45169520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 44510379 - 44510442
Alignment:
Q  234 taataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||    
T  44510379 taataagaatgatcttaaacatatacattcttcttcaattcatggaaaagttagatgttagaat 44510442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 4580062 - 4579923
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||| ||||||||||||||| |||||||||||   ||||||||||||||| ||||  |||  ||| ||||||||| |||||||||||||||||||     
T  4580062 tgtccctttggaattaagagtgttcttaagaccataa--tcccttttcggtataatgtcatttcagaattaagaatggttttaagagcatagtcccttcg 4579965  T
Q  178 atta-tttatgtctttttagaataaataatattttaagatca 218  Q
    || | |||| |||  ||   ||||||||||||||||||||||    
T  4579964 ataattttaagtcccttcgaaataaataatattttaagatca 4579923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 16459877 - 16459970
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||  |||| || | ||||||||||||| |||||||||||||||||||| |||||| |||||||||||    
T  16459877 tctcttctccctcttttgacttgtgttgatgagtctttcttctttttctactcccttttgtcccttcggaattaaaagtgttcttaagaccata 16459970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 16580827 - 16580734
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||  |||| || | ||||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  16580827 tctcttctccctcttttgacttgtgttgatgagtctttcttctttttctactcccttctgtcccttcggaattaagagtgttcttaagaccata 16580734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 3880546 - 3880447
Alignment:
Q  75 ttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccct 174  Q
    |||||||| |||| ||||||||||||| |||||||  |||||||| |||||||| || ||| |||||||||| | |||||||||||||  ||||||||||    
T  3880546 ttttgtcctttcgaaattaagagtgttcttaagac--tatagtccattttcggtttaatgttccttcgaaattatgaatggtcttaagttcatagtccct 3880449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 12799950 - 12799868
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtccctttt-cggtatattgtcccttcgaaatcaagaatggtcttaa 161  Q
    |||||||||| ||||||||||||| |||||||||||  ||||||||| |||| || |||||||||||||| ||||||||||||||    
T  12799950 tgtcccttcgaaattaagagtgttattaagaccata--gtccctttttcggtttaatgtcccttcgaaattaagaatggtcttaa 12799868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 16372921 - 16372816
Alignment:
Q  120 cttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaat-tatttatgtctttttagaataaataatattttaagatca 218  Q
    ||||| |||||| |||||||||| ||| |||||||||||||||| |||||||||||| || | ||||||||  ||  |||||||||||| ||||||||||    
T  16372921 ctttttggtataatgtcccttcggaattaagaatggtcttaagaacatagtcccttcgatatttttatgtcccttcggaataaataatagtttaagatca 16372822  T
Q  219 cagtcc 224  Q
     |||||    
T  16372821 tagtcc 16372816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 4930772 - 4930689
Alignment:
Q  92 taagagtgtttttaagaccatatagtccctttt-cggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||| |||||||||||  ||||||||| |||| || |||||||||||||| |||||||||||||| | ||||||||||||    
T  4930772 taagagtgttcttaagaccata--gtccctttttcggtttaatgtcccttcgaaattaagaatggtcttaaaaacatagtcccttc 4930689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 47761914 - 47761844
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcgg 88  Q
    ||||||||||| |||||||||||||||||||| |||| || | ||  ||||||||||||||||||||||||    
T  47761914 cctctcttctccctccttcgacttgtgttgacgagtctttcttctgcttctactcctttttgtcccttcgg 47761844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 2595387 - 2595294
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtccctttt-cggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcc 172  Q
    |||||||||| ||||||||||||| |||||||| ||  ||||||||| |||| || |||||||||| ||| |||||||||||||| | ||||||||    
T  2595387 tgtcccttcgaaattaagagtgttcttaagaccgta--gtccctttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcc 2595294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 19096859 - 19096787
Alignment:
Q  13 ttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    |||| ||||||||||| || ||||||||||||||||| |||| || | |||||||||||||||| ||||||||    
T  19096859 tttttcctctcttctcccttcttcgacttgtgttgacgagtctttcttctttttctactcctttctgtccctt 19096787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 32302437 - 32302349
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaaga 108  Q
    ||||||||| ||| || ||||||||||||| |||| || | ||||||||||||  || |||||||| ||||||||||||||| ||||||    
T  32302437 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactctcttctgtccctttggaattaagagtgttcttaaga 32302349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 10387881 - 10387975
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagt 170  Q
    ||||||||||||||||| ||| |||||||||||||||   |||||| | ||||||||| |||||||||| ||| |||||  ||||||| | ||||||    
T  10387881 tttttgtcccttcggaaataatagtgtttttaagacc--ttagtccttattcggtataatgtcccttcggaattaagaaaagtcttaaaaacatagt 10387975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 44422669 - 44422746
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtc 157  Q
    |||||||||||||||||||||||| ||||||||  ||||| | ||||| || || |||||||||| ||| ||||||||||    
T  44422669 tgtcccttcggaattaagagtgttcttaagacc--atagttctttttccgtttaatgtcccttcggaattaagaatggtc 44422746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 8268857 - 8268749
Alignment:
Q  80 tcccttcggaattaagagtgtttttaagaccatatagtccctttt-cggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaa 178  Q
    |||||||| |||||| |||||| ||||||| |||  ||||||||| |||| || |||||||||| ||| |||||||||||||| | |||||||| ||| |    
T  8268857 tcccttcgaaattaacagtgttcttaagacgata--gtccctttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtccattcga 8268760  T
Q  179 ttatttatgtc 189  Q
    | || ||||||    
T  8268759 taatatatgtc 8268749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 26286675 - 26286763
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcata 168  Q
    ||||||||||||| ||| ||| || ||||||||| |  || | ||||||||||| |||||||||| ||| |||||||||||||| ||||||    
T  26286675 tgtcccttcggaactaaaagttttcttaagaccaca--gttcattttcggtataatgtcccttcggaattaagaatggtcttaaaagcata 26286763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 8954762 - 8954828
Alignment:
Q  19 ctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    |||||||||| || ||||||||||| ||||| |||| || | |||||||||||||||| ||||||||    
T  8954762 ctctcttctcccttcttcgacttgtcttgacgagtctttcttctttttctactcctttctgtccctt 8954828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 14928132 - 14928222
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaa-ttaagagtgtttttaagac 109  Q
    ||||||||  ||| || |||||||||| || |||| || | |||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  14928132 tctcttcttcctcttttgacttgtgttaacgagtctttcttctttttctactcctttctgtccctttggaatttaagagtgttcttaagac 14928222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 15351598 - 15351688
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaa-ttaagagtgtttttaagac 109  Q
    ||||||||  ||| || |||||||||| || |||| || | |||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  15351598 tctcttcttcctcttttgacttgtgttaacgagtctttcttctttttctactcctttctgtccctttggaatttaagagtgttcttaagac 15351688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29727282 - 29727331
Alignment:
Q  1 tgtttcctatgtttttccctctcttctctctccttcgacttgtgttgacaa 51  Q
    |||||||| || |||||| ||||||||||||||||||||||||||||||||    
T  29727282 tgtttcctgtgcttttcc-tctcttctctctccttcgacttgtgttgacaa 29727331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 13313816 - 13313852
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatat 114  Q
    |||||||||||||||||||||||| ||||||||||||    
T  13313816 tgtcccttcggaattaagagtgttcttaagaccatat 13313852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 838927 - 838993
Alignment:
Q  19 ctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    |||||||||| ||  |||||||||| |||||||||| || | |||||||||||||||| ||| ||||    
T  838927 ctctcttctcccttattcgacttgtcttgacaagtctttcttctttttctactcctttctgttcctt 838993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 846103 - 846169
Alignment:
Q  19 ctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    |||||||||| ||  |||||||||| ||||| |||| || | |||||||||||||||| ||||||||    
T  846103 ctctcttctccctttttcgacttgtcttgacgagtctttcttctttttctactcctttctgtccctt 846169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 853480 - 853546
Alignment:
Q  19 ctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    |||||||||| ||  |||||||||| ||||| |||| || | |||||||||||||||| ||||||||    
T  853480 ctctcttctccctttttcgacttgtcttgacgagtctttcttctttttctactcctttctgtccctt 853546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 1204107 - 1204173
Alignment:
Q  19 ctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    |||||||||| ||  |||||||||| |||||||||| || | |||||||||||||||| ||| ||||    
T  1204107 ctctcttctcccttattcgacttgtcttgacaagtctttcttctttttctactcctttctgttcctt 1204173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 1211484 - 1211550
Alignment:
Q  19 ctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    |||||||||| ||  |||||||||| ||||| |||| || | |||||||||||||||| ||||||||    
T  1211484 ctctcttctccctttttcgacttgtcttgacgagtctttcttctttttctactcctttctgtccctt 1211550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 27238715 - 27238673
Alignment:
Q  133 tgtcccttcgaaatcaagaatggtcttaagagcatagtccctt 175  Q
    |||||||||||||| ||||||| |||||||| |||||||||||    
T  27238715 tgtcccttcgaaattaagaatgttcttaagaccatagtccctt 27238673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 6590542 - 6590575
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaag 107  Q
    |||||||||||||| |||||||||||||||||||    
T  6590542 tttttgtcccttcgaaattaagagtgtttttaag 6590575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 36477571 - 36477511
Alignment:
Q  24 ttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccct 84  Q
    ||||| ||| || ||||||||||||| |||| || | |||||||||||||||| |||||||    
T  36477571 ttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtccct 36477511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 206; Significance: 1e-112; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 13 - 297
Target Start/End: Complemental strand, 47575267 - 47574982
Alignment:
Q  13 ttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccat 112  Q
    |||| ||||||||||| ||| ||||||||||||||||||||| || |||||||||||||| ||| |||||||||| ||||||||||||| ||||||||||    
T  47575267 tttttcctctcttctccctcattcgacttgtgttgacaagtccttctcctttttctactcatttctgtcccttcgaaattaagagtgttcttaagaccat 47575168  T
Q  113 atagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatatttta 212  Q
    |||||||||| ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  47575167 atagtcccttgtcgatatattgtcccttcagaatcaagaatggtcttaagagcatagtcccttcaattatttatgtcattttagaataaagaatatttta 47575068  T
Q  213 agatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47575067 agatcatagtcccttttcggtataataagaatgatcttaaacatatatattcttcttcaattcatggagaagttagatgttagaat 47574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 4 - 297
Target Start/End: Original strand, 13521466 - 13521758
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||  ||||||||||||||||||||||| |    
T  13521466 ttcctgtgttttttcctctcttctccctccttcgacttgtgttgacaagtc-ttctcctttttctactcctttccgtcccttcggaattaagagtgttct 13521564  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    ||||||||||||||||||| | | |||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  13521565 taagaccatatagtcccttgtagatatattttcccttcggaatcaagaatggtcttaagagcatag-cccctcaattatttatgtctttttagaataaat 13521663  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||||||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  13521664 aatattttaagatcatagtcccttttcggtataataagaatggtcttaaacatatatattcttcttcaattcttgaagaagttagatgttagaat 13521758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 13 - 297
Target Start/End: Complemental strand, 41817387 - 41817107
Alignment:
Q  13 ttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccat 112  Q
    |||| ||||||||||| ||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||||||||||||| ||||||||      
T  41817387 tttttcctctcttctccctccttcgacttgtgttgacaagtccttcccctttttctactcctttctgtcccttcggaattaagagtgttcttaagacc-- 41817290  T
Q  113 atagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatatttta 212  Q
    ||||||| | |||||| |||| ||| |||||||  ||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  41817289 atagtccatcttcggtttattatcctttcgaaaataagaatggtcttaagagcatagt-ccttcaattgtttatgtctctttagaataaataatatttta 41817191  T
Q  213 agatcacagtccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |||||| |||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| |||||||    
T  41817190 agatcatagtcctttca-gtacaataagaatgatcttaaacatatatattcttcttctattcatggagaagtttgatattagaat 41817107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 4 - 297
Target Start/End: Original strand, 3997543 - 3997835
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| |    
T  3997543 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtcgttctcctttttctactcctttctgtcccttcggaattaagagtgttct 3997641  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtcttt---ttagaata 200  Q
    ||||||  |||||||| |  ||||| |||| ||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||| |   ||||||||    
T  3997642 taagac--tatagtccatcatcggtttattatcctttcggaaataagaatggtcttaagagcatagtcccttcaattatttatgtctcttaattagaata 3997739  T
Q  201 aataatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||||||||||||||||  || |||||| ||||||||||  ||||||||||  ||||||||||||||||||||| | |||||||| |||||||||||    
T  3997740 aataatattttaagatcatggtcccttttcggtataataaagatgatcttaa--atatatattcttcttcaattcttggagaagttggatgttagaat 3997835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 18 - 297
Target Start/End: Original strand, 7902605 - 7902884
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagt 117  Q
    |||| |||||| ||||||||||||||||||||||||| || |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||   |    
T  7902605 cctcgcttctccctccttcgacttgtgttgacaagtcgttctcctttttctactcatttctgtcccttcggaattaagagtgttcttaagaccataa--t 7902702  T
Q  118 cccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatc 217  Q
    || |  | ||| |||| ||| || | ||  ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  7902703 ccatcgttggtttattatccttttggaaataagaatggtcttaagagcacagtcccttcaattatttacgtctctttagaataaataatattttaagatc 7902802  T
Q  218 acagt-ccttttaggtataat-aaga--atgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |  || |||||| |||||||| ||||  ||||||||||  ||||| ||||||||||||||| | |||||||| |||||||||||    
T  7902803 atggtcccttttcggtataataaagatgatgatcttaa--atataaattcttcttcaattcttggagaagttggatgttagaat 7902884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 18 - 297
Target Start/End: Complemental strand, 34561024 - 34560743
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttccttttt--ctactcctttttgtcccttcggaattaagagtgtttttaagaccatata 115  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||||  |||||||||| |||||||||||||||||||||||| |||||||||||      
T  34561024 cctctcttctccctccttcgacttgtgttgacaagtccttctcctttttttctactcctttctgtcccttcggaattaagagtgttcttaagaccataa- 34560926  T
Q  116 gtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaaga 215  Q
     | | |  ||||| |||| ||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34560925 -ttcatcgtcggtttattatcctttcggaaataagaatggtcttaagagcatagtcccttcaattatttatgtctctttagaataaataatattttaaga 34560827  T
Q  216 tca--cagtcc--ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |||    ||||   ||| ||||||||||  ||||||||||  ||||||||||||||||||||| | ||||| ||  ||||||||||    
T  34560826 tcatggggtccctctttcggtataataaagatgatcttaa--atatatattcttcttcaattcttggagaaattgaatgttagaat 34560743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 5270896 - 5271050
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcc 119  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| |||||||||| ||||||||  |||||||    
T  5270896 tctcttctccctccttcgacttgtgttgacaagtccttctcctttttctactcctttctgtcccttcggaaataagagtgttcttaagacc--atagtcc 5270993  T
Q  120 cttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    ||||||||| || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  5270994 cttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttc 5271050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 224
Target Start/End: Complemental strand, 8694351 - 8694134
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| |    
T  8694351 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtccttctcctttttctactcctttctgtcccttcggaattaagagtgttct 8694253  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  |||||||||||| | | || |||||||| | ||| |||||||||||||| | |||||||| ||| || || ||||||  |||||||||||     
T  8694252 taagacc--atagtccctttttgatttaatgtccctttggaattaagaatggtcttaa-aacatagtccattcgataatatatgtccctttagaataaag 8694156  T
Q  204 aata-ttttaagatcacagtcc 224  Q
    | || ||||||||||| |||||    
T  8694155 agtacttttaagatcatagtcc 8694134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 39320162 - 39319931
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagt 117  Q
    ||||||||||| ||||||||||||||||| || |||| || ||||||||||| || |||| ||| ||||| ||||||||||||| |||||| ||||  ||    
T  39320162 cctctcttctccctccttcgacttgtgttaacgagtccttctcctttttctaatcatttt-gtctcttcgaaattaagagtgttcttaagatcata--gt 39320066  T
Q  118 cccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatc 217  Q
    | ||||||||| |||||||  |||  ||  |||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  39320065 ctcttttcggtttattgtct-ttctgaacaaagaatggtcttaagagcatagtcccttcaattatttatgtctcgttagaa-aaataatattttaagatc 39319968  T
Q  218 acagtcc--ttttaggtataataagaatgatcttaaa 252  Q
    |  ||||  |||| |||||||| ||||||||||||||    
T  39319967 atggtccctttttcggtataattagaatgatcttaaa 39319931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 78 - 297
Target Start/End: Complemental strand, 40840872 - 40840658
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    ||||| ||| |||||||||||||||  |||||||||  |||  |||||| |||||||||| ||   ||| |||||  |||||||||||||||||||||||    
T  40840872 tgtccattcagaattaagagtgttt--aagaccata--gtcatttttcgatatattgtccattttgaattaagaagtgtcttaagagcatagtcccttca 40840777  T
Q  178 attatttatgtctttttagaataaataatattttaagatcacagtcc-ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcat 276  Q
    ||||||||||||| ||||||||||||||||||||| ||||  ||||| |||| ||||||||||||||||| || |||| ||||||| ||||||||||| |    
T  40840776 attatttatgtctctttagaataaataatattttaggatcgtagtccattttcggtataataagaatgat-tttaaca-atatatttttcttcaattctt 40840679  T
Q  277 agagaagttagatgttagaat 297  Q
    |||||||||||||||||||||    
T  40840678 agagaagttagatgttagaat 40840658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 78 - 259
Target Start/End: Original strand, 42316161 - 42316341
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    ||||||||| |||||||||||||| || ||||| ||  || ||| ||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||||    
T  42316161 tgtcccttcagaattaagagtgttattgagacctta--gttcctattcggtataatgtcccttcgaaattaagaatggtcttaagagtatagtccgttca 42316258  T
Q  178 attatttatgtctttttagaataaataatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatat 259  Q
    ||||||||||||  || |  ||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||    
T  42316259 attatttatgtcccttcatgataaataatattttaagatcatagtcccttttcggtataataagaatgatcttaaaaatatat 42316341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 5927675 - 5927856
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||||||||| ||| ||||| ||||||||||| |||||| |    
T  5927675 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtccttctcctttttctactcttttctgtccattcggaattaaaagtgttct 5927773  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtc 189  Q
    |||||||  |||||||||||||||| || |||||||||| ||| |||||||||||||| | |||||||||||| || || ||||||    
T  5927774 taagacc--atagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaa-aacatagtcccttcgataatatatgtc 5927856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 18 - 224
Target Start/End: Complemental strand, 31766496 - 31766292
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagt 117  Q
    ||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||| ||||||||||||||| || ||||||||  |||||    
T  31766496 cctctcttctccctccttcgacttgtgttgacaagtccttctcctttttctactcctttctgtcctttcggaattaagagtattcttaagacc--atagt 31766399  T
Q  118 cccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataata-ttttaagat 216  Q
    |||||||| || || |||||||||| ||| |||||||||||||| | |||||||||| | || || ||||||  || |||||||| | || |||||||||    
T  31766398 cccttttcagtttaatgtcccttcggaattaagaatggtcttaa-aacatagtccctgcgataatatatgtcccttcagaataaaaagtacttttaagat 31766300  T
Q  217 cacagtcc 224  Q
    || |||||    
T  31766299 catagtcc 31766292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 78 - 295
Target Start/End: Original strand, 43477561 - 43477775
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    ||||| |||||||||||| ||||| |||| ||| ||  |||  | ||||||||| ||||| ||   ||| || || |||||||||||||| | |||||||    
T  43477561 tgtcctttcggaattaagggtgttcttaaaacctta--gtcattattcggtataatgtccttttagaattaaaaagggtcttaagagcatggccccttca 43477658  T
Q  178 attatttatgtctttttagaataaataatattttaagatcacagtcc-ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcat 276  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| |||| |||||| |||||||||||||||  | ||||||||||||||||||| |    
T  43477659 attatttatgtccatttagaataaataatattttaagatcatagtccattttcggtatattaagaatgatcttaa--aaatatattcttcttcaattctt 43477756  T
Q  277 agagaagttagatgttaga 295  Q
     |||| |||| | ||||||    
T  43477757 ggagatgttaaaagttaga 43477775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 238
Target Start/End: Original strand, 39216634 - 39216795
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||  ||| ||||||||| |||||||||||  |||||| ||||||||| |||||||||||||| ||||| |||||| |||||||||||||||||    
T  39216634 tgtcccttcaaaatcaagagtgttcttaagaccata--gtccctattcggtataatgtcccttcgaaattaagaaaggtcttgagagcatagtcccttca 39216731  T
Q  178 at-tatttatgtctttttagaataaataatattttaagatcacagtcc--ttttaggtataata 238  Q
    || | ||||||||  ||| |||||||||||||||||| |||| |||||  |||| |||||||||    
T  39216732 atatttttatgtccctttggaataaataatattttaaaatcatagtccatttttcggtataata 39216795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 59 - 176
Target Start/End: Original strand, 31728903 - 31729018
Alignment:
Q  59 tcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtct 158  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||  |||||||||||||||| || |||||||||  ||| |||||||||||    
T  31728903 tcctttttctactcctttctgtcccttcggaaataagagtgttcttaagacc--atagtcccttttcggtttaatgtcccttctgaattaagaatggtct 31729000  T
Q  159 taagagcatagtcccttc 176  Q
    ||| | ||||||||||||    
T  31729001 taaaaacatagtcccttc 31729018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 19540711 - 19540820
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||||||| || |||||||||| ||| |||||||||||||| | ||||||||||||     
T  19540711 tgtcccttcggaattaagagtgttcttaagaccata--gtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcg 19540808  T
Q  178 attatttatgtc 189  Q
    || || ||||||    
T  19540809 ataatatatgtc 19540820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 51698484 - 51698375
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||||||||||||||||| ||||||| |||  ||||||||||||| || |||||||||| ||| |||||||||||||| | ||||||||||||     
T  51698484 tgtcccttcggaattaagagtgttcttaagacaata--gtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcg 51698387  T
Q  178 attatttatgtc 189  Q
    || || ||||||    
T  51698386 ataatatatgtc 51698375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 252
Target Start/End: Original strand, 8661071 - 8661164
Alignment:
Q  160 aagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcacagtc-cttttaggtataataagaatgatcttaaa 252  Q
    ||||||||||||| ||||||||||||||| |  |||||||||||||||||||||||||| || | ||||  |||||||||||||||||||||||    
T  8661071 aagagcatagtccgttcaattatttatgtttccttagaataaataatattttaagatcatagcctctttccggtataataagaatgatcttaaa 8661164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 15011312 - 15011405
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | ||||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  15011312 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcccttatgtcccttcggaattaagagtgttcttaagaccata 15011405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 78 - 176
Target Start/End: Complemental strand, 16421604 - 16421508
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    ||||| |||||||||||||||||| |||||||||||  ||||||| ||||| || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  16421604 tgtccattcggaattaagagtgttcttaagaccata--gtcccttctcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttc 16421508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 37259396 - 37259492
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||| ||||||||||| |||||||||||  ||| ||||||||| || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  37259396 tgtcccttcggatttaagagtgttcttaagaccata--gtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttc 37259492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 19107174 - 19107036
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||||| |||||||| || |||||||||||  || |||||||||| || |||||||||||||| |||||||||||||| | ||||||||||||     
T  19107174 tgtcccttcggacttaagagtattcttaagaccata--gttccttttcggtttaatgtcccttcgaaattaagaatggtcttaa-aacatagtcccttcg 19107078  T
Q  178 attatttatgtctttttagaataaataata-ttttaagatca 218  Q
    || || ||||||| ||  ||||||| | || |||||||||||    
T  19107077 ataatatatgtctcttcggaataaagagtacttttaagatca 19107036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 31298097 - 31298159
Alignment:
Q  235 aataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||    
T  31298097 aataagaatgatcttaaacatatatattcttcatctattcatggagaagttagatgttagaat 31298159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 12488396 - 12488307
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  12488396 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 12488307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 14953551 - 14953640
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  14953551 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 14953640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 25690592 - 25690503
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  25690592 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 25690503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 31786035 - 31786120
Alignment:
Q  131 attgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagat 216  Q
    |||||||  ||||||| || ||||||||| ||||||||||||||| ||||||||||||| ||| | ||||||||||||||||||||    
T  31786035 attgtcctgtcgaaattaataatggtcttcagagcatagtccctttaattatttatgtcctttcaaaataaataatattttaagat 31786120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 82 - 224
Target Start/End: Original strand, 33462900 - 33463040
Alignment:
Q  82 ccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaat-t 180  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||| || |||||||||  ||| |||||| ||||||||  |||| ||||||| || |    
T  33462900 ccttcggaattaagagtgttcttaagacc--atagtcccttttcggtttaatgtcccttcagaattaagaatagtcttaagttcataatcccttcgatat 33462997  T
Q  181 atttatgtctttttagaataaataatattttaagatcacagtcc 224  Q
     |||||||| ||  | ||||||||||| |||||||||| |||||    
T  33462998 ttttatgtccttcga-aataaataataatttaagatcatagtcc 33463040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 224
Target Start/End: Original strand, 48276191 - 48276335
Alignment:
Q  79 gtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtata-ttgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||| ||  |||||||| | ||| ||||||||||||||   ||||||||||||     
T  48276191 gtcccttcggaattaagagtgttcttaagac--tatagtcccttttcggtttagatgtccctttggaattaagaatggtcttaaattcatagtcccttcg 48276288  T
Q  178 at-tatttatgtctttttagaataaataatattttaagatcacagtcc 224  Q
    || | ||||||||  ||  |||||||||||| |||||||||| |||||    
T  48276289 atatttttatgtc-cttcggaataaataataatttaagatcatagtcc 48276335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 239
Target Start/End: Complemental strand, 6943350 - 6943186
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccc 173  Q
    |||||||||||||||||||||||||||| ||||||||   |||||| | ||||||||| |||||||||  ||| ||||| |||||||| |  |||||| |    
T  6943350 tttttgtcccttcggaattaagagtgttcttaagacc--ttagtccatattcggtataatgtcccttcagaattaagaaaggtcttaaaaaaatagtctc 6943253  T
Q  174 ttcaattatttatgtctttttagaataaataata-ttttaagatcacagtccttttaggtataataa 239  Q
    ||| || || ||||||  ||  ||||||||| || ||||||||||| ||||| ||| || |||||||    
T  6943252 ttcgataatatatgtccattcggaataaatagtatttttaagatcatagtcccttttggaataataa 6943186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 176
Target Start/End: Complemental strand, 31269588 - 31269493
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||| ||||||||||| |||||||||||  ||| ||||||||| || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  31269588 tgtcccttcggatttaagagtgttcttaagaccata--gtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaa-aacatagtcccttc 31269493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 176
Target Start/End: Complemental strand, 31274077 - 31273982
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||| ||||||||||| |||||||||||  ||| ||||||||| || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  31274077 tgtcccttcggatttaagagtgttcttaagaccata--gtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaa-aacatagtcccttc 31273982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 37264096 - 37264192
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||| ||||||||||| |||||||||||  ||| |||||| || || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  37264096 tgtcccttcggatttaagagtgttcttaagaccata--gtcgcttttcagtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttc 37264192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 15225763 - 15225673
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtt-tttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  15225763 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttctttaagac 15225673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 218
Target Start/End: Original strand, 8029876 - 8030013
Alignment:
Q  79 gtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaa 178  Q
    ||||||||| ||||||||||||| |||||||||||  ||||||||||||| || |||||||||| ||| ||||||| | |||||  |||||||| ||| |    
T  8029876 gtcccttcgaaattaagagtgttcttaagaccata--gtcccttttcggtttaatgtcccttcggaattaagaatgatattaagttcatagtccattcga 8029973  T
Q  179 t-tatttatgtctttttagaataaataatattttaagatca 218  Q
    | | ||||||||  ||  |||||||||||| ||||||||||    
T  8029974 tatttttatgtc-cttcggaataaataataatttaagatca 8030013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 10713538 - 10713445
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||  |||| || | |||||||||||||||| |||||||||| |||||| |||||| |||||||||||    
T  10713538 tctcttctccctcttttgacttgtgttgatgagtctttcttctttttctactcctttctgtcccttcgaaattaaaagtgttcttaagaccata 10713445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 10927308 - 10927215
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||  |||| || | |||||||||||||||| |||||||||| |||||| |||||| |||||||||||    
T  10927308 tctcttctccctcttttgacttgtgttgatgagtctttcttctttttctactcctttctgtcccttcgaaattaaaagtgttcttaagaccata 10927215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 18023219 - 18023126
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| | || || | ||||||||||||| || ||||||||||||||||| |||||| |||||||||||    
T  18023219 tctcttctccctcttttgacttgtgttgacgaatctttcttctttttctactcccttctgtcccttcggaattaaaagtgttcttaagaccata 18023126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 8536769 - 8536657
Alignment:
Q  113 atagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaat-tatttatgtctttttagaataaataatatttt 211  Q
    ||||| |||||| |||||| ||||| |||  ||| ||||||||| ||||||||||| || |||| || | |||||||| ||| |||||||||||||||||    
T  8536769 atagtacctttttggtataatgtccattcagaattaagaatggttttaagagcataatctcttcgatatttttatgtcctttaagaataaataatatttt 8536670  T
Q  212 aagatcacagtcc 224  Q
    ||||||| |||||    
T  8536669 aagatcatagtcc 8536657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 31297986 - 31298061
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaaga 96  Q
    ||||||||  |||||| |||||||||||||||||| || ||||||||||||| |||| |||||||||||||||||||    
T  31297986 tctcttcttcctccttagacttgtgttgacaagtccttctcctttttctact-ctttctgtcccttcggaattaaga 31298061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 55252228 - 55252147
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaa 161  Q
    |||||||||||||||||||||||| ||||||||  ||||||| || ||||| || |||||||||||||| | ||||||||||||    
T  55252228 tgtcccttcggaattaagagtgttcttaagacc--atagtccattctcggtttaatgtcccttcgaaattaggaatggtcttaa 55252147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 23093683 - 23093587
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcc 172  Q
    |||||||||||||| |||||||||| || ||||||||   |||||||| ||| ||||| ||||| |||||||| ||||| |||||||||| ||||||||    
T  23093683 tttttgtcccttcgaaattaagagttttcttaagacc--ttagtccctattccgtataatgtccattcgaaattaagaaaggtcttaagaacatagtcc 23093587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 32081658 - 32081753
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||| ||||||||||||| |||| ||||||  ||||||||||||| || |||||||| | ||| |||||||||||||| | ||||||||||||    
T  32081658 tgtcccttcgaaattaagagtgttcttaa-accata--gtcccttttcggtttaatgtccctttggaattaagaatggtcttaaaaacatagtcccttc 32081753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 2820327 - 2820214
Alignment:
Q  113 atagtcccttttcggt-atattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataata-ttt 210  Q
    |||||| ||||||||| ||| |||| ||||||||| ||||||||||||||| |||||||||||||||| || || |||  ||| ||||||| | || |||    
T  2820327 atagtctcttttcggttataatgtctcttcgaaattaagaatggtcttaagtgcatagtcccttcaataatatacgtccatttggaataaaaattatttt 2820228  T
Q  211 taagatcacagtcc 224  Q
    |||||||| |||||    
T  2820227 taagatcaaagtcc 2820214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 224
Target Start/End: Complemental strand, 19906803 - 19906659
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||| |||||| |||||| |||||| ||||  ||||||||| ||| || ||| |||||| ||| |||||||  ||||||  ||||||||||||     
T  19906803 tgtcccttcgaaattaatagtgttcttaagatcata--gtccctttttggtttaatgttccttcggaattaagaatgaccttaagttcatagtcccttcg 19906706  T
Q  178 at-tatttatgtctttttagaataaataatattttaagatcacagtcc 224  Q
    || | |||| ||| ||| | |||||||||||||||||||||| |||||    
T  19906705 atatttttaagtcctttga-aataaataatattttaagatcatagtcc 19906659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 47244706 - 47244625
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaa 161  Q
    |||||||||| ||||||||||||| |||||||  |||||| |||||||||| || |||||||||| ||| ||||||| ||||||    
T  47244706 tgtcccttcgaaattaagagtgttcttaagac--tatagttccttttcggtttaatgtcccttcggaattaagaatgatcttaa 47244625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 8660897 - 8661055
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttccttttt--ctactcctttttgtcccttcggaattaagagtgtttttaagaccatata 115  Q
    ||||||||||  ||| |||||||| ||||||| |||| || ||||||||  ||||||||| | ||||||| |||||||||||| || |||||| ||||      
T  8660897 cctctcttctacctctttcgacttctgttgacgagtccttctcctttttttctactccttct-gtccctttggaattaagagtattcttaagatcata-- 8660993  T
Q  116 gtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||| | |||||| | ||||| ||| | ||| ||||||||| ||||||||||| ||| ||||    
T  8660994 gtccatattcggtttgttgtctctttggaattaagaatggtattaagagcataatccattca 8661055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 12823421 - 12823513
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcc 172  Q
    |||||||||||||||||||||||| ||||||||  ||| ||||||||| || || |||||||||  ||| || ||||||||||| | ||||||||    
T  12823421 tgtcccttcggaattaagagtgttcttaagacc--ataatcccttttcagtttaatgtcccttcagaattaaaaatggtcttaaaaacatagtcc 12823513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 14899110 - 14899177
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| || ||||||||||||||||| |||| || | |||||||||||||||||| ||||||    
T  14899110 cctctcttctcccttcttcgacttgtgttgacgagtctttcttctttttctactcctttttttccctt 14899177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 192
Target Start/End: Original strand, 33468539 - 33468649
Alignment:
Q  82 ccttcggaattaagagtgtttttaa-gaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaat- 179  Q
    |||||||||||||||||||| |||| |||||||  ||||||||||||| || ||||||||   ||| |||||||||||||||  |||| ||||||| ||     
T  33468539 ccttcggaattaagagtgttcttaaagaccata--gtcccttttcggtttaatgtccctttagaattaagaatggtcttaagttcataatcccttcgata 33468636  T
Q  180 tatttatgtcttt 192  Q
    | |||||||||||    
T  33468637 tttttatgtcttt 33468649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 42758389 - 42758455
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcc-cttttcggtatattgtcccttcgaaa 145  Q
    |||||||||||||||||||||||| ||||||||  |||||||  ||||||||||| |||||||||||||    
T  42758389 tgtcccttcggaattaagagtgttcttaagacc--atagtccatttttcggtataatgtcccttcgaaa 42758455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 55150155 - 55150053
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatgg----tcttaagagcatag 169  Q
    |||||||||||||| ||||||||||||| |||| | |  |||||||||||| |||||| |||||||||   || ||||||||    ||||||||||||||    
T  55150155 tttttgtcccttcgaaattaagagtgttcttaatatc--atagtccctttttggtataatgtcccttcatgattaagaatggacaatcttaagagcatag 55150058  T
Q  170 tccct 174  Q
    |||||    
T  55150057 tccct 55150053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 14868562 - 14868629
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| || ||||||||||||||||| |||| || | |||||| ||||||||| ||||||||    
T  14868562 cctctcttctcccttcttcgacttgtgttgacgagtctttcttctttttgtactcctttctgtccctt 14868629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 14877372 - 14877305
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| || ||||||||||||||||| |||| || | |||||| ||||||||| ||||||||    
T  14877372 cctctcttctcccttcttcgacttgtgttgacgagtctttcttctttttgtactcctttctgtccctt 14877305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 175
Target Start/End: Complemental strand, 13060024 - 13059930
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccctt 175  Q
    |||||||||||||||||||||| | ||||||||  |||||||||||||||| ||  ||||||||  ||| || | || |||||||| |||||||||||    
T  13060024 tgtcccttcggaattaagagtgatcttaagacc--atagtcccttttcggttta-cgtcccttcagaattaaaagtgttcttaagaccatagtccctt 13059930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 15805214 - 15805304
Alignment:
Q  123 ttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaa 213  Q
    ||||||||| |||||||||| ||| ||||||  |||||| |||||||||||||  || ||||||| |  ||  ||||||||||||||||||    
T  15805214 ttcggtataatgtcccttcggaattaagaataatcttaatagcatagtccctttgataatttatgccccttcggaataaataatattttaa 15805304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 1150946 - 1151006
Alignment:
Q  128 tatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgt 188  Q
    |||| |||||||||| ||| ||||||| ||||||||||||||||||||  || ||||||||    
T  1150946 tataatgtcccttcggaattaagaatgatcttaagagcatagtccctttgataatttatgt 1151006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 15020070 - 15020151
Alignment:
Q  93 aagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||| |||| |||||||||||  ||||||||  | |||| ||||| ||| |||| ||| |||||||||||||||||||||||||    
T  15020070 aagaatgttcttaagaccata--gtccctttgagatataatgtccattcaaaattaaggatggtcttaagagcatagtcccttc 15020151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 30564215 - 30564255
Alignment:
Q  13 ttttccctctcttctctctccttcgacttgtgttgacaagt 53  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  30564215 tttttcctctcttctccctccttcgacttgtgttgacaagt 30564255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 31728837 - 31728893
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactccttt 76  Q
    ||||||||| ||| ||||||||||||||||||||  || | ||||||||||||||||    
T  31728837 tctcttctccctcattcgacttgtgttgacaagttcttcttctttttctactccttt 31728893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 2574977 - 2575020
Alignment:
Q  133 tgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    ||||||||| |||  |||||||||||||||||||||||||||||    
T  2574977 tgtcccttcaaaactaagaatggtcttaagagcatagtcccttc 2575020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 20513562 - 20513519
Alignment:
Q  133 tgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||    
T  20513562 tgtcccttcgaaattaagaatggttttaagaacatagtcccttc 20513519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 26034788 - 26034725
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtc 81  Q
    ||||||||||| || ||||||||||||||||| |||| || | |||||||| ||||||| ||||    
T  26034788 cctctcttctcccttcttcgacttgtgttgacgagtctttcttctttttctgctcctttctgtc 26034725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 10318577 - 10318651
Alignment:
Q  13 ttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcg 87  Q
    |||| ||||||||||| |||||||||||||||||||  |||| || | ||  ||||||| |||| ||||||||||    
T  10318577 tttttcctctcttctccctccttcgacttgtgttgatgagtccttcttctgcttctactactttctgtcccttcg 10318651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 297
Target Start/End: Complemental strand, 12878619 - 12878562
Alignment:
Q  237 taagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||||||||||||||   ||| ||||||||||||||| | ||||||||| ||||||||||    
T  12878619 taagaatgatcttaaa---atacattcttcttcaattcttggagaagttacatgttagaat 12878562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 13059971 - 13059873
Alignment:
Q  79 gtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaa 178  Q
    |||||||| ||||||| |||||| |||||||||||  ||||||||||||| ||    ||||| | ||| |||||||||||||| | |||| ||| |||||    
T  13059971 gtcccttcagaattaaaagtgttcttaagaccata--gtcccttttcggtttaacaccccttgggaattaagaatggtcttaaaaacataatccattcaa 13059874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 39991571 - 39991612
Alignment:
Q  135 tcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||  |||||||||||||||||||||||| ||||    
T  39991571 tcccttcgaaagtaagaatggtcttaagagcatagtctcttc 39991612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 24490309 - 24490253
Alignment:
Q  32 ccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcgg 88  Q
    ||||||||||||||| || ||||||| | ||  |||||||||||| |||||||||||    
T  24490309 ccttcgacttgtgttaacgagtcattcttctgcttctactcctttatgtcccttcgg 24490253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 33722558 - 33722602
Alignment:
Q  128 tatattgtcccttcgaaatcaagaatggtcttaagagcatagtcc 172  Q
    |||| |||||||||| ||| |||||||||||||||| ||||||||    
T  33722558 tataatgtcccttcggaattaagaatggtcttaagaacatagtcc 33722602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 4 - 297
Target Start/End: Original strand, 43302165 - 43302458
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||||||||||| || |||||||| ||||||||| |||| ||||||||||||||||||| |    
T  43302165 ttcctatgtttttcc-tctcttctccctcattcgacttgtgttgacaagtccttctcctttttttactcctttctgtcgcttcggaattaagagtgttct 43302263  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||||||| |||||| ||| |||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  43302264 taagaccatataatcccttgtcgatatattgtccattcggaatcaataatggtcttaagagcatagtcccttcaattatttatgtccttttagaataaag 43302363  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43302364 aatattttaagatcatagtcccttttcggtataataagaatgatcttaaacatatatattcttcttcaattcatggagaagttagatgttagaat 43302458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 4 - 297
Target Start/End: Original strand, 4237822 - 4238112
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||  || |||||||||||||||||| ||||| |||||||||||||||||| |    
T  4237822 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagttcttctcctttttctactcctttctgtccattcggaattaagagtgttct 4237920  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  |||||||||||||||| || |||||||||| ||| ||||||| |||||| |||||||||||||| ||  || || ||| ||  ||||||||    
T  4237921 taagacc--atagtcccttttcggtttaatgtcccttcggaattaagaatgatcttaacagcatagtcccttcgatagttcat-tctcttcggaataaat 4238017  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||| ||||||||||| ||| |||||| | |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  4238018 aatgttttaagatcatagtcccttttcgatataataagaatgatcttaaacatatatattcttcttcaactcatggagaagttagatgttagaat 4238112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 4 - 297
Target Start/End: Original strand, 4242561 - 4242851
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||  || |||||||||||||||||| ||||| |||||||||||||||||| |    
T  4242561 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagttcttctcctttttctactcctttctgtccattcggaattaagagtgttct 4242659  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  |||||||||||||||| || |||||||||| ||| ||||||| |||||| |||||||||||||| ||  || || ||| ||  ||||||||    
T  4242660 taagacc--atagtcccttttcggtttaatgtcccttcggaattaagaatgatcttaacagcatagtcccttcgatagttcat-tctcttcggaataaat 4242756  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||| ||||||||||| ||| |||||| | |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  4242757 aatgttttaagatcatagtcccttttcgatataataagaatgatcttaaacatatatattcttcttcaactcatggagaagttagatgttagaat 4242851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 13 - 293
Target Start/End: Original strand, 31449354 - 31449632
Alignment:
Q  13 ttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccat 112  Q
    |||| ||||||||||| |||||| |||||||||||||||||  || |||||||||||||||||| |||||||||||||||||||||||| ||||||||      
T  31449354 tttttcctctcttctccctcctttgacttgtgttgacaagttcttctcctttttctactcctttctgtcccttcggaattaagagtgttcttaagacc-- 31449451  T
Q  113 atagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatatttta 212  Q
    ||||||| |||||||| || |||||||||| ||| ||||||||||||||||||||||||||||| || ||| || | | ||  ||||||||||| |||||    
T  31449452 atagtccattttcggtttaatgtcccttcggaattaagaatggtcttaagagcatagtcccttcgataattcat-tatcttcggaataaataatgtttta 31449550  T
Q  213 agatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgtta 293  Q
    |||||| ||| |||||| |||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  31449551 agatcatagtcccttttcggtataataagaatgatcttaagcatatatattcttcttcaactcatggagaagttagatgtta 31449632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 4 - 297
Target Start/End: Complemental strand, 37772320 - 37772028
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttg-tgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtt- 101  Q
    ||||| ||||||||| ||||||||| ||||||||||||| |||||||||||| || |||||||||||||||||| |||||||| |||||||||||||||     
T  37772320 ttcctgtgtttttcc-tctcttctccctccttcgacttggtgttgacaagtcgttctcctttttctactcctttctgtccctttggaattaagagtgttc 37772222  T
Q  102 tttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataa 201  Q
    ||||||||||||  |||| |  ||||| |||| ||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37772221 tttaagaccata--gtccatcgtcggtttattatcctttcggaaataagaatggtcttaagagcatagtcccttcaattatttatgtctctttagaataa 37772124  T
Q  202 ataatattttaagatcacagtcc--ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |||||||||||||||||  ||||  |||| ||||||||||   |||||||||  ||||||||||||||||||||| | |||||||| |||||||||||    
T  37772123 ataatattttaagatcatggtccctttttcggtataataaaggtgatcttaa--atatatattcttcttcaattcttggagaagttggatgttagaat 37772028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 297
Target Start/End: Original strand, 34818200 - 34818477
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttccttttt-ctactcctttttgtcccttcggaattaagagtgtttttaagaccatatag 116  Q
    |||||||||||  |||||||||||||||||||||||| || |||||||| |||||||||| |||||||||| ||||||||||||| |||||||||||  |    
T  34818200 cctctcttctccatccttcgacttgtgttgacaagtccttctccttttttctactcctttctgtcccttcgaaattaagagtgttcttaagaccata--g 34818297  T
Q  117 tcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagat 216  Q
    | | |  || || |||| ||| |||||||  ||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||    
T  34818298 ttcatcctcagtttattatcctttcgaaaataagaatggtcttaagagcatagtccattcaattatttatgtttctttagaataaataatattttaagat 34818397  T
Q  217 cacagtcc-ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||  |||| |||| ||||||||||  ||||||||||  |||||||| |||||||||||| | ||||||||||||||||||||    
T  34818398 catggtcctttttcggtataataaagatgatcttaa--atatatatacttcttcaattcttggagaagttagatgttagaat 34818477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 13 - 297
Target Start/End: Original strand, 25367475 - 25367758
Alignment:
Q  13 ttttccctctcttctctctccttcgacttgtgttgacaagtcattttccttttt-ctactcctttttgtcccttcggaattaagagtgtttttaagacca 111  Q
    |||| ||||||||||| ||||||||||||||||||||||||  || |||||||| |||||||||| ||||||||||||| |||||||||| |||||||||    
T  25367475 tttttcctctcttctccctccttcgacttgtgttgacaagttgttctccttttttctactcctttctgtcccttcggaaataagagtgttcttaagacca 25367574  T
Q  112 tatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatatttt 211  Q
    ||   ||| |  ||||| |||| ||| || | ||  |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  25367575 taa--tccatcgtcggtttattatccttttggaaataagaatggtcttaagagcatagtcccttcatttatttatgtctctttagaataaataatatttt 25367672  T
Q  212 aagatcacagtcc--ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |||||||  ||||  |||| ||||||||||  ||||||||||  ||||||||||||||||||||| | |||||||| |||||||||||    
T  25367673 aagatcatggtccctttttcggtataataaagatgatcttaa--atatatattcttcttcaattcttggagaagttggatgttagaat 25367758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 297
Target Start/End: Original strand, 8330857 - 8331135
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttccttttt-ctactcctttttgtcccttcggaattaagagtgtttttaagaccatatag 116  Q
    ||||||||||| |||||||||||||||| |||||||| || |||||||| |||||||||| ||||| ||||||||||||||| || |||||||||||  |    
T  8330857 cctctcttctccctccttcgacttgtgtcgacaagtccttctccttttttctactcctttctgtccattcggaattaagagtattcttaagaccata--g 8330954  T
Q  117 tcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagat 216  Q
    ||| |  | ||| |||| ||| |||||||  ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  8330955 tccatcgttggtttattatcctttcgaaaataagaatggtcttaagagcatagtcccttcaattatttatttctctttagaataaataatattttaagat 8331054  T
Q  217 cacagtcc--ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||   |||  |||| ||||||||||  ||||||||||  ||||||||||||||||||||| | |||||||| |||||||||||    
T  8331055 catgatccctttttcggtataataaagatgatcttaa--atatatattcttcttcaattcttggagaagttggatgttagaat 8331135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 65 - 224
Target Start/End: Original strand, 15951069 - 15951228
Alignment:
Q  65 ttctactcctttt-tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaaga 163  Q
    |||| |||||||| |||||||||||||||||||||||| |||||||||||  ||||||||||||| || |||||||||| ||| |||||||||||| | |    
T  15951069 ttcttctccttttctgtcccttcggaattaagagtgttcttaagaccata--gtcccttttcggtttaatgtcccttcggaattaagaatggtctttaaa 15951166  T
Q  164 gcatagtcccttcaattatttatgtctttttagaataaataata-ttttaagatcacagtcc 224  Q
     |||||||||||  || || ||||||  || |||||||| | || ||||||||||| |||||    
T  15951167 acatagtccctttgataatatatgtcccttcagaataaagagtacttttaagatcatagtcc 15951228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 17953506 - 17953646
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtccctttt-cggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||  ||||||| ||||| |||| |||||   ||||||||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||||    
T  17953506 tgtcccttcataattaagtgtgttcttaaaaccatg--gtccctttttcggtataatgtcccttccaaattaagaatggtcttaagagcatagtcccttc 17953603  T
Q  177 aat-tatttatgtctttttagaataaataatattttaagatca 218  Q
     || | ||||||||  || ||||||||||||||||||| ||||    
T  17953604 gatatttttatgtcccttaagaataaataatattttaacatca 17953646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 21387762 - 21387669
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  21387762 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagaccata 21387669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 224
Target Start/End: Original strand, 44925453 - 44925597
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||||||||||||||||| ||||||||  ||||||| ||||||||  | |||||||||| ||| |||||||||||||| | ||||| ||||||     
T  44925453 tgtcccttcggaattaagagtgttcttaagacc--atagtccattttcggttcaatgtcccttcggaattaagaatggtcttaa-aacatagccccttcg 44925549  T
Q  178 attatttatgtctttttagaataaataata-ttttaagatcacagtcc 224  Q
    || || ||||||  || |||||||||| || ||||||||||| |||||    
T  44925550 ataatatatgtcccttcagaataaatagtacttttaagatcatagtcc 44925597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 17026491 - 17026352
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtat-attgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||||||||||||||| ||||||||  ||||||||| |||||| | | |||||||||| ||| |||||||||||||||  ||||||||||||    
T  17026491 tgtcccttcggaattaagagtgttcttaagacc--atagtccctattcggtttaaatgtcccttcggaattaagaatggtcttaagttcatagtcccttc 17026394  T
Q  177 aat-tatttatgtctttttagaataaataatattttaagatca 218  Q
     || | ||||||||  ||  |||||||||||| ||||||||||    
T  17026393 gatatgtttatgtc-cttcggaataaataataatttaagatca 17026352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 17556983 - 17556844
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtat-attgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||||||||||||||| ||||||||  ||||||||| |||||| | | |||||||||| ||| |||||||||||||||  ||||||||||||    
T  17556983 tgtcccttcggaattaagagtgttcttaagacc--atagtccctattcggtttaaatgtcccttcggaattaagaatggtcttaagttcatagtcccttc 17556886  T
Q  177 aat-tatttatgtctttttagaataaataatattttaagatca 218  Q
     || | ||||||||  ||  |||||||||||| ||||||||||    
T  17556885 gatatgtttatgtc-cttcggaataaataataatttaagatca 17556844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 38181775 - 38181871
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||| || |||||||||| ||| || ||||||||||| | ||||||| ||||    
T  38181775 tgtcccttcggaattaagagtgttcttaagacc--atagtcccttttcggtttaatgtcccttcggaattaaaaatggtcttaaaaacatagtctcttc 38181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 171
Target Start/End: Original strand, 18875920 - 18876011
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtc 171  Q
    |||||||||| ||||||||||||| ||||||||||   ||||||||||||| || |||||||||||||| |||||||||||||| | |||||||    
T  18875920 tgtcccttcgaaattaagagtgttcttaagaccatt--gtcccttttcggtttaatgtcccttcgaaattaagaatggtcttaaaaacatagtc 18876011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 18862066 - 18862155
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  18862066 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 18862155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 21384342 - 21384249
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| |||||| |||||||||| |||||| |||||||||||    
T  21384342 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccgtcggaattaaaagtgttcttaagaccata 21384249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 1910487 - 1910579
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcc 172  Q
    |||||||| ||||||||||||||| |||||||||||  ||||||||||||| || |||||||||  ||| |||||||||||||| | ||||||||    
T  1910487 tgtccctttggaattaagagtgttcttaagaccata--gtcccttttcggtttaatgtcccttcataattaagaatggtcttaaaaacatagtcc 1910579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 176
Target Start/End: Complemental strand, 17020914 - 17020818
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||||||||||||||| ||||||||  ||||||| || ||||| || |||||||| | ||| |||||||||||||| | ||||||||||||    
T  17020914 tgtcccttcggaattaagagtgttcttaagacc--atagtcctttctcggtttaatgtccctttggaattaagaatggtcttaaaaacatagtcccttc 17020818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 176
Target Start/End: Complemental strand, 17551351 - 17551255
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||||||||||||||| ||||||||  ||||||| || ||||| || |||||||| | ||| |||||||||||||| | ||||||||||||    
T  17551351 tgtcccttcggaattaagagtgttcttaagacc--atagtcctttctcggtttaatgtccctttggaattaagaatggtcttaaaaacatagtcccttc 17551255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 19167210 - 19167131
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtctt 159  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||| || || ||||||| ||| ||||||||||||    
T  19167210 tgtcccttcggaattaagagtgttcttaagacc--atagtcccttttcggtttaatgacccttcggaattaagaatggtctt 19167131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 224
Target Start/End: Original strand, 40125427 - 40125572
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtat-attgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    ||||| |||||||||||||||||| ||||||||  ||||||||| |||| | | | |||||||||| ||| |||||||||||||||  ||||||||||||    
T  40125427 tgtccgttcggaattaagagtgttcttaagacc--atagtccctattcgttttaaatgtcccttcggaattaagaatggtcttaagttcatagtcccttc 40125524  T
Q  177 aat-tatttatgtctttttagaataaataatattttaagatcacagtcc 224  Q
     || | |||||||| ||  | ||||||||||| |||||||||| |||||    
T  40125525 gatatttttatgtccttcga-aataaataataatttaagatcatagtcc 40125572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 82 - 176
Target Start/End: Complemental strand, 1808006 - 1807914
Alignment:
Q  82 ccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||||||||||| |||||||||||  ||| ||||||||| || ||||| |||| ||| |||||||||||||| | ||| ||||||||    
T  1808006 ccttcggaattaagagtgttcttaagaccata--gtcacttttcggtttaatgtccattcggaattaagaatggtcttaaaaacattgtcccttc 1807914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 21827435 - 21827521
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaa 106  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||| ||||||||||| |||||| ||||    
T  21827435 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcctttcggaattaaaagtgttcttaa 21827521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 23915090 - 23915001
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||| |||| |||||| |||||| |||||||    
T  23915090 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtccattcgaaattaaaagtgttcttaagac 23915001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 228
Target Start/End: Complemental strand, 7002158 - 7002066
Alignment:
Q  137 ccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataata-ttttaagatcacagtcctttt 228  Q
    |||||| ||||||||||| ||||||| ||||||||||||  || |||||||||  ||| ||||||| |||| ||||||||||| |||||||||    
T  7002158 ccttcggaatcaagaatgatcttaagggcatagtccctttgataatttatgtccctttggaataaaaaatatttttaagatcatagtcctttt 7002066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 224
Target Start/End: Original strand, 15875269 - 15875373
Alignment:
Q  121 ttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaat-tatttatgtctttttagaataaataatattttaagatcac 219  Q
    ||||||||||| | |||||||| ||| || |||||| ||||||| ||||||||||  || | ||||||||  || ||||||||||||||||||||||||     
T  15875269 ttttcggtataatctcccttcggaattaaaaatggtattaagagtatagtccctttgatatttttatgtcccttcagaataaataatattttaagatcat 15875368  T
Q  220 agtcc 224  Q
    |||||    
T  15875369 agtcc 15875373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 25733663 - 25733755
Alignment:
Q  22 tcttctctctccttcgacttgtgttgacaagtcatt-ttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||| ||| || || |||||||||| |||| || ||| ||||| ||||||||| ||||||||||||||||| |||||| |||||||||||    
T  25733663 tcttctccctcttttgatttgtgttgacgagtctttcttcttttttttactcctttctgtcccttcggaattaaaagtgttcttaagaccata 25733755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 227
Target Start/End: Complemental strand, 14036000 - 14035847
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccc 173  Q
    |||||| || |||||| |||||||||||||||||||||||  |||| ||   | |||| |||||||||||||| ||||||  |||||||||||||  |||    
T  14036000 tttttgcccattcggatttaagagtgtttttaagaccatag-gtcctttcaagatataatgtcccttcgaaattaagaatcttcttaagagcataacccc 14035902  T
Q  174 ttcaattatttatgtctttttagaataaataata-ttttaagatcacagtccttt 227  Q
    ||  || |||||||||| ||   |||||| | || ||||||||||| ||||||||    
T  14035901 tttcatcatttatgtctcttcgaaataaagagtatttttaagatcatagtccttt 14035847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 21411621 - 21411527
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaatt-aagagtgtttttaagaccata 113  Q
    |||||| || ||| || ||||||||||||| |||| || | ||||||||||| |||| ||||||||||||||| || |||||| |||||||||||    
T  21411621 tctcttttccctcttttgacttgtgttgacgagtctttcttctttttctacttctttctgtcccttcggaattaaaaagtgttcttaagaccata 21411527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 21806113 - 21806019
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaatt-aagagtgtttttaagaccata 113  Q
    |||||| || ||| || ||||||||||||| |||| || | ||||||||||| |||| ||||||||||||||| || |||||| |||||||||||    
T  21806113 tctcttttccctcttttgacttgtgttgacgagtctttcttctttttctacttctttctgtcccttcggaattaaaaagtgttcttaagaccata 21806019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 36684148 - 36684064
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccat-atagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaa 161  Q
    ||||||||||||||||||| |||| ||||||||||  | ||| ||||||||| || |||||||||| ||| |||| |||||||||    
T  36684148 tgtcccttcggaattaagaatgttcttaagaccatggtggtctcttttcggtttaatgtcccttcggaattaagagtggtcttaa 36684064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 16066716 - 16066782
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcatt-ttcctttttctactcctttttgtccctt 85  Q
    ||||||||| ||| |||||||||||||||| |||| || ||| ||||||||||||||| ||||||||    
T  16066716 tctcttctccctctttcgacttgtgttgacgagtctttcttcttttttctactcctttctgtccctt 16066782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 2966199 - 2966098
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccc 173  Q
    |||||||||| | |||| |||||||||| |||||||| ||  |||||| |||||||||  ||| ||||  ||| ||||| |||||||| | |||||||||    
T  2966199 tttttgtcccataggaaataagagtgttcttaagacctta--gtccctgttcggtataacgtctcttcagaattaagaacggtcttaaaaacatagtccc 2966102  T
Q  174 ttca 177  Q
    ||||    
T  2966101 ttca 2966098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 176
Target Start/End: Original strand, 13799460 - 13799499
Alignment:
Q  137 ccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  13799460 ccttcgaaataaaaaatggtcttaagagcatagtcccttc 13799499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 19954728 - 19954685
Alignment:
Q  133 tgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||    
T  19954728 tgtcccttcggaataaagaatggtcttaagaacatagtcccttc 19954685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 31439708 - 31439606
Alignment:
Q  84 ttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatt 183  Q
    |||| |||||||||||||||||||||||| ||  || |||| |||||| ||||| |   |||| ||||| ||||||||||||||||| | ||| || |||    
T  31439708 ttcgaaattaagagtgtttttaagaccat-tatccctttttaggtataatgtccttctaaaattaagaacggtcttaagagcatagttcattcgataatt 31439610  T
Q  184 tatg 187  Q
    ||||    
T  31439609 tatg 31439606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 33417057 - 33417015
Alignment:
Q  134 gtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    ||||||||||||| |||||||||||||| | ||||||||||||    
T  33417057 gtcccttcgaaattaagaatggtcttaaaaacatagtcccttc 33417015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 4582792 - 4582857
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||| ||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||    
T  4582792 tctctcctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtccctt 4582857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 2536864 - 2536796
Alignment:
Q  134 gtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaa 202  Q
    ||||||||| ||| ||||||  | ||| ||||||||||||||| || ||||||||| ||| ||||||||    
T  2536864 gtcccttcggaattaagaatacttttaggagcatagtcccttcgataatttatgtcctttcagaataaa 2536796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 5884468 - 5884412
Alignment:
Q  133 tgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtc 189  Q
    ||||||||||||   ||||||||||||||||||||| || |||| || |||||||||    
T  5884468 tgtcccttcgaagctaagaatggtcttaagagcatattctcttcgataatttatgtc 5884412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 295
Target Start/End: Original strand, 10160201 - 10160493
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcatt-ttcctttttctactcctttttgtcccttcggaattaagagtgttt 102  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||| || ||| ||||||||||| ||| |||| ||||| |||||||||||||     
T  10160201 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtccttcttcttttttctactcttttctgtcgcttcgaaattaagagtgttc 10160299  T
Q  103 ttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaa 202  Q
    ||||||||||||||||| || ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10160300 ttaagaccatatagtccattgtcgatatattgtcccttcggaatcaagaatggtcttaagagcatagtcccttcaattatttatgtccttttagaataaa 10160399  T
Q  203 taatattttaagatcacagtcc-ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttaga 295  Q
     ||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10160400 gaatattttaagatcatagtccattttcggtataataagaatgatcttaaacatatatattcttcttcaattcatggagaagttagatgttaga 10160493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 33 - 297
Target Start/End: Complemental strand, 35602511 - 35602247
Alignment:
Q  33 cttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatat 132  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| | |||||||  ||||||||||||| |||||||||||||||||||| ||| |||||    
T  35602511 cttcgacttgtgttgacaagttattctcctttttctactcctttctctcccttca-aattaagagtgttcttaagaccatatagtcccttgtcgatatat 35602413  T
Q  133 tgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcacagt-ccttttagg 231  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||| ||    
T  35602412 tgtcccttcggaatcaagaatggtcttaagagcacagtcccttcaattatttatgtctttttagaataaagaatattttaagatcatagtcccttttcgg 35602313  T
Q  232 tataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35602312 tataataagaatgatcttaaacatatatattcttcttcaattcatggagaagttagatgttagaat 35602247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 18 - 297
Target Start/End: Complemental strand, 30643724 - 30643446
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagt 117  Q
    ||||||||||| ||| |||||||||||||| |||||| || ||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  30643724 cctctcttctccctcattcgacttgtgttggcaagtccttctcctttttctactcctttttgtcgcttctgaattaagagtgttcttaagaccatatagt 30643625  T
Q  118 cccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatc 217  Q
    ||||| ||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  30643624 cccttgtcgatatattatcccttcggaatcaagaatggtcttaagagcatagtcccttcaattatttatgtccttttagaataaagaatattttaagatc 30643525  T
Q  218 acagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    | ||| |||||| ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||| ||||||||||||    
T  30643524 atagtcccttttcggtataataagaatgatcttaaac--atatattcttcttcaattcatggagaagtcagatgttagaat 30643446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 297
Target Start/End: Complemental strand, 30658777 - 30658499
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagt 117  Q
    ||||||||||| ||| |||||||||| ||||||| || || ||||||||||||||||||  ||| ||||||||||||| ||||| || ||||||||||||    
T  30658777 cctctcttctccctcattcgacttgtcttgacaaatccttctcctttttctactcctttccgtcgcttcggaattaag-gtgttcttcagaccatatagt 30658679  T
Q  118 cccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatc 217  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||    
T  30658678 cccttgtcgatatattgtcccttcggaatcaagaatggtcttaagagcatagtca-ttcaattatttatgtccttttagaataaataatattttaagatc 30658580  T
Q  218 acagtcc-ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    | ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  30658579 atagtcccttttcggtataataagaatgatcttaaacatatatattcttcttcaattcatggagaagtcagatgttagaat 30658499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 18 - 297
Target Start/End: Original strand, 6297386 - 6297664
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttccttttt-ctactcctttttgtcccttcggaattaagagtgtttttaagaccatatag 116  Q
    ||||||||||| |||||||||||||||||||||| || || |||||||| |||||||||| |||||||||||||||||||||||| |||||||||||  |    
T  6297386 cctctcttctccctccttcgacttgtgttgacaaatccttctccttttttctactcctttatgtcccttcggaattaagagtgttcttaagaccata--g 6297483  T
Q  117 tcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagat 216  Q
    ||| |  ||||| |||| ||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6297484 tccatcgtcggtttattatcctttcggaaataagaatggtcttaagagcatagtcccttcaattatttatgtctctttagaataaataatattttaagat 6297583  T
Q  217 cacagtcc--ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||  ||||  ||||  |||||||||  ||||||||||  ||||||||||||||||||||| | ||||||||  ||||||||||    
T  6297584 catggtccctttttcagtataataaagatgatcttaa--atatatattcttcttcaattcttggagaagttgaatgttagaat 6297664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 17968420 - 17968601
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||| || | |||||||||||||||| ||||||||||||||||| |||||| |    
T  17968420 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttct 17968518  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtc 189  Q
    |||||||  |||||||||||||||| || |||||||||| ||| |||||||||||||| | |||||||||||| || || ||||||    
T  17968519 taagacc--atagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaa-aacatagtcccttcgataatatatgtc 17968601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 19891927 - 19892147
Alignment:
Q  1 tgtttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgt 100  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||| ||||||||||||||||||    
T  19891927 tgtttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtccttctcctttttctactcctttatgtcgcttcggaattaagagtgt 19892025  T
Q  101 ttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaata 200  Q
    | |||||| |  |||||||||||||||| || |||||||||  ||| |||||||||||||| | |||||||| ||| || || ||||||  || ||||||    
T  19892026 tcttaagatc--atagtcccttttcggtttaatgtcccttcagaattaagaatggtcttaa-aacatagtccattcgataatatatgtcccttcagaata 19892122  T
Q  201 aataata-ttttaagatcacagtcc 224  Q
    || | || ||||||||||| |||||    
T  19892123 aagagtacttttaagatcatagtcc 19892147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 73 - 297
Target Start/End: Original strand, 17453132 - 17453350
Alignment:
Q  73 ctttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcc 172  Q
    |||| |||||||| ||||||||||||| | ||||||||| |  |||| ||||| ||||||||| |||||| ||| |||||||||||||| ||||||||||    
T  17453132 ctttctgtccctttggaattaagagtgctcttaagaccaaa--gtcctttttcagtatattgttccttcggaattaagaatggtcttaatagcatagtcc 17453229  T
Q  173 cttcaattatttatgtctttttagaataaataatattttaagatcacagtcc--ttttaggtataataagaatgatcttaaacatatatattcttcttca 270  Q
    ||||||||||||||   | || ||||||||||||||||||| |||| |||||  |||| ||||||||||| ||||||||||      |||||||||||||    
T  17453230 cttcaattatttataagtcttcagaataaataatattttaatatcatagtccctttttcggtataataaggatgatcttaa------atattcttcttca 17453323  T
Q  271 attcatagagaagttagatgttagaat 297  Q
    | || | |||||||||||| |||||||    
T  17453324 aatcttggagaagttagatattagaat 17453350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 210
Target Start/End: Complemental strand, 28855744 - 28855544
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||||||||||||| ||||||||| ||||||||||| ||||  ||||||| || ||||||||||||| | | ||| ||||||  ||||||||||||| |    
T  28855744 ttcctatgtttttcc-tctcttctccctccttcgactcgtgtcaacaagtccttctcctttttctact-catcttgccccttcaaaattaagagtgttct 28855647  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtc-ttaagagcatagtcccttcaattatttatgtctttttagaataaa 202  Q
    |||||||  ||||||||| ||| || |||||||| ||| |||  |||||||||| ||||||||||||||||||||   ||||||| || |||||||||||    
T  28855646 taagacc--atagtccctattcagtttattgtcctttcaaaaataagaatggtctttaagagcatagtcccttca---atttatgcctctttagaataaa 28855552  T
Q  203 taatattt 210  Q
    ||||||||    
T  28855551 taatattt 28855544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 224
Target Start/End: Complemental strand, 18345049 - 18344844
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||| ||            |||||||||||||||||||||||||||||||| |    
T  18345049 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtcctt------------ctcctttttgtcccttcggaattaagagtgttct 18344963  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  |||||||||||| ||| || ||||| |||| ||| |||||||||||||| | |||||||||||| || || ||||||  || |||||||||    
T  18344962 taagacc--atagtccctttttggtttaatgtcctttcggaatgaagaatggtcttaa-aacatagtcccttcgataatatatgtcccttcagaataaat 18344866  T
Q  204 aata-ttttaagatcacagtcc 224  Q
    | || ||||||||||| |||||    
T  18344865 agtacttttaagatcatagtcc 18344844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 210 - 297
Target Start/End: Complemental strand, 19538796 - 19538709
Alignment:
Q  210 ttaagatcacagtccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  19538796 ttaagatcatagtctttttcggtataataagaatgatcttaaacatatatattcttcttcaattcatggagaagatagatgttagaat 19538709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 78 - 228
Target Start/End: Original strand, 42926174 - 42926322
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||||||||||||||||| |||| |||  ||||| |||||||||| || |||||||||  ||| ||||||||| |||||  ||||||||||||     
T  42926174 tgtcccttcggaattaagagtgttcttaatacc--atagttccttttcggtttaatgtcccttcagaattaagaatggtattaagttcatagtcccttcg 42926271  T
Q  178 at-tatttatgtctttttagaataaataatattttaagatcacagtcctttt 228  Q
    || | ||||||||  ||| |||||||||||| |||||||||| |||||||||    
T  42926272 atatttttatgtc-ctttggaataaataataatttaagatcatagtcctttt 42926322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 9184946 - 9185046
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccc 173  Q
    ||||||||||||||||| |||||||||| |||||||||||  ||| ||||||||| || |||||||||| ||| |||||||||||||| | |||||||||    
T  9184946 tttttgtcccttcggaaataagagtgttcttaagaccata--gtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtccc 9185043  T
Q  174 ttc 176  Q
    |||    
T  9185044 ttc 9185046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 25477827 - 25477965
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||| |||||| ||||||||||||||||||  ||||||||||||| || |||||||||| ||| |||||||||||||| | ||||||||||||     
T  25477827 tgtcccttcgaaattaaaagtgtttttaagaccata--gtcccttttcggtttaatgtcccttcggaattaagaatggtcttaa-aacatagtcccttcg 25477923  T
Q  178 attatttatgtctttttagaataaataata-ttttaagatca 218  Q
    || || ||||||  || |||||||| | || |||||||||||    
T  25477924 ataatatatgtcccttcagaataaagagtacttttaagatca 25477965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 25496855 - 25496993
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||||||||||||||||| |||||||| ||  ||||||||||||| || |||||||||| ||| |||||||||||||| | ||||||||||||     
T  25496855 tgtcccttcggaattaagagtgttcttaagacctta--gtcccttttcggtttaatgtcccttcggaattaagaatggtcttaa-aacatagtcccttcg 25496951  T
Q  178 attatttatgtctttttagaataaataata-ttttaagatca 218  Q
    || || ||||||  || |||||||| | || |||||||||||    
T  25496952 ataatatatgtcccttcagaataaagagtacttttaagatca 25496993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 1284112 - 1284019
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  1284112 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagaccata 1284019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 23068249 - 23068342
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | ||||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  23068249 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcccttctgtcccttcggaattaagagtgttcttaagaccata 23068342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 78 - 237
Target Start/End: Complemental strand, 30651481 - 30651322
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatat-tgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||||| ||||||||| |||||||||||  |||||| |||||| ||  |||||||||| ||| |||||||||||||||  ||||||||||||    
T  30651481 tgtcccttcggaataaagagtgttcttaagaccata--gtccctattcggtttaaatgtcccttcggaattaagaatggtcttaagttcatagtcccttc 30651384  T
Q  177 aat-tatttatgtctttttagaataaataatattttaagatcacagt-ccttttaggtataat 237  Q
     || | ||||||||  ||  |||||||||||| |||||||||| ||| |||||| ||||||||    
T  30651383 gatatttttatgtc-cttcggaataaataataatttaagatcatagtcccttttcggtataat 30651322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 19094080 - 19094165
Alignment:
Q  134 gtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaat-tatttatgtctttttagaataaataatattttaagatca 218  Q
    ||||||||| ||| ||||||||||||||||||||| ||| |||||| | |||||||| ||| ||||||||||||||||||||||||    
T  19094080 gtcccttcggaattaagaatggtcttaagagcatactcctttcaatatttttatgtcctttcagaataaataatattttaagatca 19094165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 30344412 - 30344501
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  30344412 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 30344501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 81 - 176
Target Start/End: Original strand, 9180262 - 9180355
Alignment:
Q  81 cccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    ||||||||||||||||||||| |||||||||||  ||| ||||||||| || |||||||||| ||| |||||||||||||| |  |||||||||||    
T  9180262 cccttcggaattaagagtgttcttaagaccata--gtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaaaaaaatagtcccttc 9180355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 1934525 - 1934621
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||| ||||||||||| |||||||||||  ||| ||||||||| |  |||||||||| ||| |||||||||||||| | ||||||||||||    
T  1934525 tgtcccttcggatttaagagtgttcttaagaccata--gtcgcttttcggtttcatgtcccttcggaattaagaatggtcttaaaaacatagtcccttc 1934621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 12797490 - 12797352
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||||||||||||||||| |||| |||  |||||||||||||||| || |||||||||  ||| ||||||| |||||| | ||||||||||||     
T  12797490 tgtcccttcggaattaagagtgttcttaatacc--atagtcccttttcggtttaatgtcccttcagaattaagaatgctcttaa-aacatagtcccttcg 12797394  T
Q  178 attatttatgtctttttagaataaataata-ttttaagatca 218  Q
    || || ||||||  || |||||||| | || |||||||||||    
T  12797393 ataatatatgtcccttcagaataaagagtacttttaagatca 12797352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 9785748 - 9785659
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| |  | ||||||||||||||||  |||||||||||||||| |||||| |||||||    
T  9785748 tctcttctccctcttttgacttgtgttgacgagtcttgcttctttttctactcctttccgtcccttcggaattaaaagtgttcttaagac 9785659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 74 - 161
Target Start/End: Complemental strand, 31327320 - 31327234
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtccct-tttcggtatattgtcccttcgaaatcaagaatggtcttaa 161  Q
    |||||||||||||| ||||||||||||| ||||||||  ||||||||| |||||||  | |||||||||| ||| ||||||||||||||    
T  31327320 tttttgtcccttcgaaattaagagtgttcttaagacc--atagtccctgtttcggttcaatgtcccttcggaattaagaatggtcttaa 31327234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 7737394 - 7737490
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||| ||||||| ||| |||||||||||  |||||||| |||| || |||||||| | ||| |||||||||||||||  ||||||| ||||    
T  7737394 tgtcccttcggagttaagagcgttcttaagaccata--gtccctttacggtttaatgtccctttggaattaagaatggtcttaagttcatagtctcttc 7737490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 25375489 - 25375422
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| |||||||||||||||||||| |||  || | |||||||||||||||| ||||||||    
T  25375489 cctctcttctccctccttcgacttgtgttgacgagtttttcttctttttctactcctttatgtccctt 25375422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 228
Target Start/End: Original strand, 13291070 - 13291213
Alignment:
Q  84 ttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatt 183  Q
    |||| ||||||||||||| |||||| |||| |  ||||| | | |||| |||||||||| |||  | |||||||||||||| ||| ||||||| || |||    
T  13291070 ttcgaaattaagagtgttcttaagatcataga--cccttctagatataatgtcccttcggaattgacaatggtcttaagagtataatcccttcgataatt 13291167  T
Q  184 tatgtctttttagaataaataata-ttttaagatcacagtcctttt 228  Q
    ||||||  || |||||||||| || ||||||||||| ||| |||||    
T  13291168 tatgtcccttaagaataaatagtatttttaagatcatagttctttt 13291213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 224
Target Start/End: Complemental strand, 29678317 - 29678176
Alignment:
Q  82 ccttcggaattaagagtgtttttaagaccatatagtcccttttcggtat-attgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaat- 179  Q
    ||||| |||||||||||||| ||||||||  ||||||||| |||||| | | ||| |||||| ||| |||||||||||||||  |||||| ||||| ||     
T  29678317 ccttcagaattaagagtgttcttaagacc--atagtccctattcggtttaaatgttccttcggaattaagaatggtcttaagttcatagttccttcgata 29678220  T
Q  180 tatttatgtctttttagaataaataatattttaagatcacagtcc 224  Q
    | ||||||||  ||  |||||||||||| |||||||||| |||||    
T  29678219 tttttatgtc-cttcggaataaataataatttaagatcatagtcc 29678176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 24286388 - 24286455
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| || ||||||||||||||||| |||| || | |||||| ||||||||| ||||||||    
T  24286388 cctctcttctcccttcttcgacttgtgttgacgagtctttcttctttttatactcctttctgtccctt 24286455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 24292956 - 24293023
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| || ||||||||||||||||| |||| || | ||||||||||||| || ||||||||    
T  24292956 cctctcttctcccttcttcgacttgtgttgacgagtctttcttctttttctactccattctgtccctt 24293023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 377786 - 377849
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||| ||| |||||||||||||||| |||| ||||  ||||||||||||||| ||||||||    
T  377786 tctcttctccctctttcgacttgtgttgacgagtcttttt--tttttctactcctttctgtccctt 377849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 17255011 - 17255057
Alignment:
Q  128 tatattgtcccttcgaaatcaagaatggtcttaagagcatagtccct 174  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||||    
T  17255011 tataatgtcccttcgaaattaagaatggtcttaagaacatagtccct 17255057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 6856795 - 6856730
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||    
T  6856795 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtccctt 6856730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 224
Target Start/End: Complemental strand, 19542333 - 19542183
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcgg-tatattgtcccttcgaaatcaagaatggtcttaagagcatagtcc 172  Q
    |||||||||| | | ||||||| ||||| |||||| ||||  |||||||||  | |||| |||| ||||||||| | ||||||| |||||||||||||      
T  19542333 tttttgtcccattgaaattaagtgtgttcttaagatcata--gtcccttttgagatataatgtctcttcgaaattatgaatggtattaagagcatagttg 19542236  T
Q  173 cttcaattatttatgtctttttagaataaataata-ttttaagatcacagtcc 224  Q
    ||||||| ||| |||||| ||  ||||||| | || ||||||||| |||||||    
T  19542235 cttcaataattaatgtctcttcggaataaagagtatttttaagattacagtcc 19542183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 42248825 - 42248760
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||    
T  42248825 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtccctt 42248760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 28855400 - 28855340
Alignment:
Q  196 gaataaataatattttaagatcacagtccttttaggtataataagaatgatcttaaacata 256  Q
    ||||||||||||||||||||||| | || |||| |||  ||| ||||||||||||||||||    
T  28855400 gaataaataatattttaagatcatattcattttcggtgcaatgagaatgatcttaaacata 28855340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 26897225 - 26897159
Alignment:
Q  19 ctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    |||||||||| || ||| |||||||||||||  ||| || | |||||||||||||||| ||||||||    
T  26897225 ctctcttctcccttctttgacttgtgttgacgtgtctttgttctttttctactcctttctgtccctt 26897159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 19094200 - 19094258
Alignment:
Q  237 taagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||||||||||||  || ||| |||||||||| |||| | ||||||||||||||||||||    
T  19094200 taagaatgatctta--caaataaattcttcttcgattcttcgagaagttagatgttagaat 19094258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 34070017 - 34069952
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||| ||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||    
T  34070017 tctctcctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttatgtccctt 34069952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 176; Significance: 8e-95; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 4 - 297
Target Start/End: Original strand, 9361 - 9652
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||||||  || |||||||||||||||||| |||||||||||||||||||||||| |    
T  9361 ttcctgtgttttttcctctcttctccctccttcgacttgtgttgacaagttcttctcctttttctactcctttctgtcccttcggaattaagagtgttct 9460  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  |||||||||||||||| || ||||| |||| ||| ||||||||||||||||||||||||||||| || ||| || ||| ||| ||||||||    
T  9461 taagacc--atagtcccttttcggtttaatgtccattcggaattaagaatggtcttaagagcatagtcccttcgataattcat-tctctttggaataaat 9557  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||| ||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  9558 aatgttttaagatcatagtcccttttcggtataataagaatgatcttaaacatatatattcttcttcaactcatggagaagttagatgttagaat 9652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 176; Significance: 8e-95; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 40 - 293
Target Start/End: Complemental strand, 83633 - 83378
Alignment:
Q  40 ttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttt-tcggtatattgtccc 138  Q
    ||||||||||||||| || |||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  83633 ttgtgttgacaagtccttctcctttttctactcatttatgtcccttcggaattaagagtgttcttaagaccatatagtccctttgtcggtatattgtccc 83534  T
Q  139 ttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcacagtcc-ttttaggtataat 237  Q
    |||  ||||||||| |||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  83533 ttcagaatcaagaacggtcttaagagcatagtcccttcaataatttatatccttttagaataaataatattttaagatcatagtccattttcggtataat 83434  T
Q  238 aagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgtta 293  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  83433 aagaatgatcttaaacatatatattcttcttcaattcttgaagaagttagatgtta 83378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 13 - 261
Target Start/End: Complemental strand, 81420 - 81174
Alignment:
Q  13 ttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccat 112  Q
    |||| ||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  81420 tttttcctctcttctccctccttcgacttgtgttgacaagtccttctcctttttctactcctttctgtcccttcggaattaagagtgttcttaagaccat 81321  T
Q  113 atagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatatttta 212  Q
    |||||||||| || |||||||||||||||| |||||| |||| ||||||||||||| |||||||||| ||||||||| ||||||||||   |||||||||    
T  81320 atagtcccttgtccgtatattgtcccttcggaatcaataatgatcttaagagcataatcccttcaataatttatgtccttttagaata---aatatttta 81224  T
Q  213 agatcacagtcc-ttttaggtataataagaatgatcttaaacatatatat 261  Q
    |||| | ||||| |||| ||||||||||||||||||||||| ||||||||    
T  81223 agattatagtccattttcggtataataagaatgatcttaaatatatatat 81174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 169; Significance: 1e-90; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 34 - 297
Target Start/End: Original strand, 18784064 - 18784327
Alignment:
Q  34 ttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatatt 133  Q
    ||||| |||||||||| |||| || ||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||    
T  18784064 ttcgaattgtgttgacgagtccttctcctttttctactccttct-gtcccttcggaattaagagtgttcttaagaccatatagtcttttttcggtatatt 18784162  T
Q  134 gtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcacagt-ccttttaggt 232  Q
    || | |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||| |||||| |||    
T  18784163 gttcattcggaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctctttagaataaataataatttaagatcatagtaccttttcggt 18784262  T
Q  233 ataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |||||||||||||| ||||||||||||||| |||||| |||||| ||||||||| ||||||||||    
T  18784263 ataataagaatgattttaaacatatatattattcttctattcatggagaagttaaatgttagaat 18784327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 4 - 297
Target Start/End: Complemental strand, 3094702 - 3094412
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||  || |||||||||||||||||| |||||||||||||||||||||||| |    
T  3094702 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagttcttctcctttttctactcctttctgtcccttcggaattaagagtgttct 3094604  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  |||||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||| || ||| || ||| ||  ||||||||    
T  3094603 taagacc--atagtcccttttcggtttaatgtcccttcgaaattaagaatggtcttaacagcatagtcccttcgataattcat-tctcttcggaataaat 3094507  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||| ||||||||||| ||| |||||| | |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  3094506 aatgttttaagatcatagtcccttttcgatataataagaatgatcttaaacatatatattcttcttcaactcatggagaagttagatgttagaat 3094412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 18 - 297
Target Start/End: Original strand, 41097452 - 41097730
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttccttttt-ctactcctttttgtcccttcggaattaagagtgtttttaagaccatatag 116  Q
    ||||||||||| ||||||||||||||||||||||||| || |||||||| |||||||||| |||||||||||||||||||||||| |||||||||||       
T  41097452 cctctcttctccctccttcgacttgtgttgacaagtcgttctccttttttctactcctttctgtcccttcggaattaagagtgttcttaagaccataa-- 41097549  T
Q  117 tcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagat 216  Q
    ||| |  ||||| |||| ||| || | ||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41097550 tccatcgtcggtttattatccttttggaaataagaatggtcttaagagcatagtcccttcaattatttatgtctctttagaataaataatattttaagat 41097649  T
Q  217 cacagtcc--ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||  ||||  |||| ||||||||||  ||||||||||  ||||||||||||||||||||| | |||||||| |||||||||||    
T  41097650 catggtccctttttcggtataataaagatgatcttaa--atatatattcttcttcaattcttggagaagttggatgttagaat 41097730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 20 - 297
Target Start/End: Original strand, 8267333 - 8267608
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcc 119  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||||||||||||| | ||| |||| ||||||||| |||| |||||||||||  ||||    
T  8267333 tctcttctc-ctccttcgacttgtgttgacaagtccttatcctttttctactccttct-gtctcttcagaattaagaatgttcttaagaccata--gtcc 8267428  T
Q  120 cttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcac 219  Q
     | |||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||     
T  8267429 ttattcggtttattgtcctttcgaaaataagaatggtcttaagagcatagtcccttcaattattcatgtctctttagaataaatattattttaagatcat 8267528  T
Q  220 agt-cctttta-ggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
     || ||||||| ||||||||||  ||||||||||| |||||||||||||||  |||||| ||||||||||||||||||||    
T  8267529 ggtcccttttacggtataataaagatgatcttaaaaatatatattcttcttttattcatggagaagttagatgttagaat 8267608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 17213922 - 17214139
Alignment:
Q  1 tgtttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgt 100  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||| || ||||||| | ||||||||||||||| | || |||||||||||||||||||    
T  17213922 tgtttcctatgtttttcc-tctcttctccctccttcgacttgtgttaacgagtcattcttctttttctactccttat-gttccttcggaattaagagtgt 17214019  T
Q  101 ttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaata 200  Q
    | |||||||||||  || |||||||||| |||||||| |||| ||  |||||||||||||| ||||||||| |||||||||||  ||||| |||||||||    
T  17214020 tcttaagaccata--gttccttttcggtttattgtcctttcggaactaagaatggtcttaacagcatagtcacttcaattatt--tgtctctttagaata 17214115  T
Q  201 aataatattttaagatcacagtcc 224  Q
    |||||||||||||||||| |||||    
T  17214116 aataatattttaagatcatagtcc 17214139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 78 - 297
Target Start/End: Original strand, 40232919 - 40233138
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||||||||||||||||| |||||| ||||  |||| |  ||| | |||| ||| |||| ||  || |||| ||||||||||||||||||||||    
T  40232919 tgtcccttcggaattaagagtgttcttaagatcata--gtccatcgtcgatttattatcctttcggaaataataatgatcttaagagcatagtcccttca 40233016  T
Q  178 attatttatgtctttttagaataaataatattttaagatcacagtccttttaggtataataagaatgatcttaaac--atatatattcttcttcaattca 275  Q
    ||| ||||||||| ||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||||||||||| |||||    
T  40233017 attgtttatgtctctttagaataaataatattttaagatcatagtccttttcggtacaataagaatgatcttaaacatatatatattcttcttctattca 40233116  T
Q  276 tagagaagttagatgttagaat 297  Q
    | |||||||||||| |||||||    
T  40233117 tggagaagttagatattagaat 40233138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 20 - 297
Target Start/End: Complemental strand, 33055634 - 33055363
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcc 119  Q
    ||||||||| ||||||||||||||||| | ||||| || |||||||||||||       ||||||||| |||| |||||||| |||||||||||  || |    
T  33055634 tctcttctccctccttcgacttgtgtttaaaagtccttctcctttttctact-------gtcccttcgaaatttagagtgttcttaagaccata--gtac 33055544  T
Q  120 cttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcac 219  Q
     | |||||| |||||||| |||| |   ||||||||| ||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||     
T  33055543 atattcggtttattgtcctttcggacataagaatggtgttaagaggatagtcccttcaattgtttatgtctctttagaataaataatattttaagatcat 33055444  T
Q  220 agtcc-ttttaggtataataagaatgatcttaaac--atatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||| |||| |||| |||||||||||||||||||  |||||||||||||||| ||||||  |||||| | ||||||||||    
T  33055443 agtcctttttcggtacaataagaatgatcttaaacatatatatattcttcttctattcatgaagaagtaaaatgttagaat 33055363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 10140716 - 10140562
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcc 119  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| |||||||||| ||||||||  |||||||    
T  10140716 tctcttctccctccttcgacttgtgttgacaagtccttctcctttttctactcctttctgtcccttcggaaataagagtgttcttaagacc--atagtcc 10140619  T
Q  120 cttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    ||||||||| || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  10140618 cttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttc 10140562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 10135948 - 10135794
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcc 119  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| ||||||| || ||||||||  |||||||    
T  10135948 tctcttctccctccttcgacttgtgttgacaagtccttctcctttttctactcctttctgtcccttcggaaataagagtattcttaagacc--atagtcc 10135851  T
Q  120 cttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    ||||||||| || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  10135850 cttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttc 10135794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 51040976 - 51041185
Alignment:
Q  13 ttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccat 112  Q
    |||| ||||||||||| ||||||||||||||||||||||||| || ||||||||||||| |||| ||||||||||||||||||||| || ||||||||      
T  51040976 tttttcctctcttctccctccttcgacttgtgttgacaagtccttctcctttttctacttctttctgtcccttcggaattaagagtattcttaagacc-- 51041073  T
Q  113 atagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataata-tttt 211  Q
    |||||||||||||||| || |||||||||  ||| |||||||||||||| | |||||||||||| || || |||||   ||||||||||| | || ||||    
T  51041074 atagtcccttttcggtttaatgtcccttcagaattaagaatggtcttaa-aacatagtcccttcgataatatatgttcctttagaataaagagtactttt 51041172  T
Q  212 aagatcacagtcc 224  Q
    ||||||| |||||    
T  51041173 aagatcatagtcc 51041185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 224
Target Start/End: Original strand, 26927178 - 26927395
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||||||||| |    
T  26927178 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtcattctcctttttctactcctttctgtccctttgaaattaagagtgttct 26927276  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  |||||||||||||||| || | |||||| | ||| |||||||||||| | | |||||||||||| || || ||||||  || ||||||||     
T  26927277 taagacc--atagtcccttttcggtttaatatccctttggaattaagaatggtctt-acaacatagtcccttcgataatatatgtcccttcagaataaag 26927373  T
Q  204 aata-ttttaagatcacagtcc 224  Q
    | || ||||||||||| |||||    
T  26927374 agtatttttaagatcatagtcc 26927395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 74 - 226
Target Start/End: Original strand, 16649162 - 16649312
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccc 173  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||||||| || |||||||||||||| |||||||||||||| | |||||||||    
T  16649162 tttttgtcccttcggaattaagagtgttcttaagaccata--gtcccttttcggtttaatgtcccttcgaaattaagaatggtcttaa-aacatagtccc 16649258  T
Q  174 ttcaattatttatgtctttttagaataaataata-ttttaagatcacagtcctt 226  Q
    ||| || || ||||||  || |||||||| | || ||||||||||| |||||||    
T  16649259 ttcgataatatatgtcccttcagaataaagagtatttttaagatcatagtcctt 16649312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 16834037 - 16833899
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||||||||||||||||| |||||||||||  |||||||| || | || |||||||||| ||| |||||||||||||||  ||||||||||||     
T  16834037 tgtcccttcggaattaagagtgttcttaagaccata--gtccctttccgatttaatgtcccttcggaattaagaatggtcttaagttcatagtcccttcg 16833940  T
Q  178 at-tatttatgtctttttagaataaataatattttaagatca 218  Q
    || | ||||||||  ||| |||||||||||| ||||||||||    
T  16833939 atatttttatgtc-ctttggaataaataataatttaagatca 16833899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 47450757 - 47450866
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||| || || |||||| |||| |||||||||||||| | ||||||| ||||     
T  47450757 tgtcccttcggaattaagagtgtttttaagacc--atagtcccttttcggtttaatgccccttcaaaattaagaatggtcttaaaaacatagtctcttcg 47450854  T
Q  178 attatttatgtc 189  Q
    || || ||||||    
T  47450855 ataatatatgtc 47450866  T

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Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 1924550 - 1924639
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  1924550 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 1924639  T

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Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 20923564 - 20923653
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  20923564 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 20923653  T

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Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 39243519 - 39243608
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  39243519 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 39243608  T

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Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 39247074 - 39247163
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  39247074 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 39247163  T

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Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 41387471 - 41387560
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  41387471 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 41387560  T

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Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 39200293 - 39200389
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||| ||||||||||||||| |||| ||||||  ||||||||| ||| || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  39200293 tgtccctttggaattaagagtgttcttaataccata--gtccctttttggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttc 39200389  T

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Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 168
Target Start/End: Complemental strand, 12260554 - 12260468
Alignment:
Q  80 tcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcata 168  Q
    |||||| ||||||||||||||||||||||||  ||||||| ||||||||||| |||||||||  ||| ||| |||||||||| ||||||    
T  12260554 tccctttggaattaagagtgtttttaagacc--atagtccattttcggtataatgtcccttcagaattaaggatggtcttaaaagcata 12260468  T

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Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 176
Target Start/End: Complemental strand, 25844317 - 25844220
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtccctttt-cggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||| | ||||||||||| |||||||||||  ||||||||| |||| || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  25844317 tgtcccttcgaatttaagagtgttcttaagaccata--gtccctttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttc 25844220  T

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Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 237
Target Start/End: Complemental strand, 7882548 - 7882389
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtccc-ttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||| ||||||||||||||| ||||||||  |||||||| ||||||||||| |||||||||  ||| |||||||||||||||  || ||||||| |    
T  7882548 tgtccctttggaattaagagtgttcttaagacc--atagtccctttttcggtataatgtcccttcagaattaagaatggtcttaagttcagagtccctcc 7882451  T
Q  177 aat-tatttatgtctttttagaataaataatattttaagatcacagt-ccttttaggtataat 237  Q
     || | ||||||||  ||  |||| ||||||| |||||||||| ||| |||||| ||||||||    
T  7882450 gatatttttatgtc-cttcggaatgaataatactttaagatcatagtcccttttcggtataat 7882389  T

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Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 19798532 - 19798628
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||| ||||||||||||| ||||||||  |||||||||||| | | || |||||||||||||| |||||||||||| | | |||| |||||||    
T  19798532 tgtcccttcgtaattaagagtgttcttaagacc--atagtccctttttgatttaatgtcccttcgaaattaagaatggtcttcaaaacataatcccttc 19798628  T

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Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 39037296 - 39037417
Alignment:
Q  133 tgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcacagtcc--ttttag 230  Q
    ||||| |||||||| ||||||| | |||||||||||||| |||  || | |||||||  ||   |||||||||||||||||||||| | |||  |||| |    
T  39037296 tgtccattcgaaattaagaatgatgttaagagcatagtcgcttttatgaattatgtcccttcgaaataaataatattttaagatcataatcctttttttg 39037395  T
Q  231 gtataataagaatgatcttaaa 252  Q
    ||||||||||||||||||||||    
T  39037396 gtataataagaatgatcttaaa 39037417  T

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Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 79 - 218
Target Start/End: Original strand, 28434167 - 28434304
Alignment:
Q  79 gtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaa 178  Q
    |||||||||||||||||||| || |||||| ||||  |||  |||| |||||| | |||||||||||| |||||||||||||| |||||||||| ||| |    
T  28434167 gtcccttcggaattaagagttttcttaagaacata--gtctttttt-ggtataatctcccttcgaaattaagaatggtcttaaaagcatagtccattcga 28434263  T
Q  179 ttatttatgtctttttagaataaataatattt-taagatca 218  Q
    | || ||||||| ||   |||||| ||||||| ||||||||    
T  28434264 taatatatgtctcttcgaaataaagaatatttgtaagatca 28434304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 9328099 - 9328146
Alignment:
Q  128 tatattgtcccttcgaaatcaagaatggtcttaagagcatagtccctt 175  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  9328099 tatattgtcccttcgaaattaagaatggtcttaagaacatagtccctt 9328146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 23192359 - 23192498
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtat-attgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||| ||||||||||||||||||| ||||||||  |||||||||||||||| | | ||||| |||| ||| |||||||||||||||  ||  ||||||||    
T  23192359 tgtcacttcggaattaagagtgttcttaagacc--atagtcccttttcggtttaaatgtccattcggaattaagaatggtcttaagttcacggtcccttc 23192456  T
Q  177 aat-tatttatgtctttttagaataaataatattttaagatca 218  Q
     || | ||||||||  ||  |||||||||||| ||||||||||    
T  23192457 gatatttttatgtc-cttccgaataaataataatttaagatca 23192498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 1067094 - 1067013
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttc 86  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||||| |||  || | |||||||||||||||| ||| |||||    
T  1067094 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacgagtttttcttctttttctactcctttatgtaccttc 1067013  T

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Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 2493402 - 2493504
Alignment:
Q  73 ctttttgtcccttcggaattaa-gagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtc 171  Q
    ||||||||||| | ||| |||| || ||||||||||||||||  |||||||   |  ||| |||||||||| ||| ||||||||||||||||||||||||    
T  2493402 ctttttgtcccgtaggatttaaagaatgtttttaagaccata--gtcccttcgagaaataatgtcccttcggaattaagaatggtcttaagagcatagtc 2493499  T
Q  172 ccttc 176  Q
    |||||    
T  2493500 ccttc 2493504  T

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Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 22428689 - 22428753
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcc 82  Q
    ||||||||||| || ||||||||||||||||| |||| || | |||||||||||||||| |||||    
T  22428689 cctctcttctcccttcttcgacttgtgttgacgagtctttcttctttttctactcctttatgtcc 22428753  T

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Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 9352945 - 9352992
Alignment:
Q  128 tatattgtcccttcgaaatcaagaatggtcttaagagcatagtccctt 175  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||||    
T  9352945 tatattgttccttcgaaattaagaatggtcttaagaacatagtccctt 9352992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 26198958 - 26198891
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| || ||| ||||||| ||||| |||| |||| |||||||||||||||| ||||||||    
T  26198958 cctctcttctcccttcttagacttgtcttgacgagtcttttttctttttctactcctttctgtccctt 26198891  T

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Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 52100702 - 52100779
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcc 82  Q
    ||||| ||||||||| ||||||||| || ||||||||||| ||||| |||| || | |||||||||||||||| |||||    
T  52100702 ttcctgtgtttttcc-tctcttctcccttcttcgacttgtcttgacgagtctttcttctttttctactcctttctgtcc 52100779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 21498249 - 21498184
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||    
T  21498249 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtccctt 21498184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 40166530 - 40166494
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagacc 110  Q
    |||||||||||||||||||||||||||| ||||||||    
T  40166530 tttttgtcccttcggaattaagagtgttcttaagacc 40166494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 16836780 - 16836815
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagt 53  Q
    ||||||||||| ||||||||||||||||||||||||    
T  16836780 cctctcttctccctccttcgacttgtgttgacaagt 16836815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 33380568 - 33380611
Alignment:
Q  133 tgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||    
T  33380568 tgtcccttcggaattaagaatggtcttaagaacatagtcccttc 33380611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 113
Target Start/End: Original strand, 39587891 - 39587926
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccata 113  Q
    |||||||||||||||||||||||| |||||||||||    
T  39587891 tgtcccttcggaattaagagtgttcttaagaccata 39587926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 175
Target Start/End: Complemental strand, 38621274 - 38621175
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccc 173  Q
    ||||||| ||||  |||||||||||||| |||||| ||||  ||||||||||| | || |||||||||  ||| || |||| |||||| | |||||||||    
T  38621274 tttttgttccttaagaattaagagtgttcttaagatcata--gtcccttttcgttttaatgtcccttcagaattaataatgctcttaaaaacatagtccc 38621177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 14819570 - 14819505
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||| ||  |||||||||| || || |||| || | |||||||||||||||||||||||||    
T  14819570 tctcttctccctttttcgacttgtcttaacgagtctttcttctttttctactcctttttgtccctt 14819505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 19309244 - 19309293
Alignment:
Q  128 tatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||| |||||||||| ||| || ||||||||||||| |||||||||||||    
T  19309244 tataatgtcccttcggaattaataatggtcttaagaacatagtcccttca 19309293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 164; Significance: 1e-87; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 4 - 297
Target Start/End: Complemental strand, 3034256 - 3033966
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||  || |||||||||||||||||| |||||||||||||||||||||||| |    
T  3034256 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagttcttctcctttttctactcctttctgtcccttcggaattaagagtgttct 3034158  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  |||||||||||||||| || |||||||||| ||| |||||||||||||| |||||||||||||| || ||| || ||| ||  ||||||||    
T  3034157 taagacc--atagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaacagcatagtcccttcgataattcat-tctcttcggaataaat 3034061  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||| ||||||||||| ||| |||||| | |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  3034060 aatgttttaagatcatagtcccttttcgatataataagaatgatcttaaacatatatattcttcttcaactcatggagaagttagatgttagaat 3033966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 4 - 297
Target Start/End: Complemental strand, 3673199 - 3672909
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||  || ||||||||||||||||| ||||||||||||||||||||||||| |    
T  3673199 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagttcttctcctttttctactccttcttgtcccttcggaattaagagtgttct 3673101  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  |||||||||||||||| || |||||||||| ||| |||||||||||||| |||||||||||||  || ||| || ||| ||  ||||||||    
T  3673100 taagacc--atagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaacagcatagtccctttgataattcat-tctcttcggaataaat 3673004  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||| ||||||||||| ||| |||||| | |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  3673003 aatgttttaagatcatagtcccttttcgatataataagaatgatcttaaacatatatattcttcttcaactcatggagaagttagatgttagaat 3672909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 4 - 297
Target Start/End: Complemental strand, 3693231 - 3692941
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||  || |||||||||||||||||  |||||||||||||||||||||||| |    
T  3693231 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagttcttctcctttttctactccttcctgtcccttcggaattaagagtgttct 3693133  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  |||||||||||||||| || |||||||||| ||| |||||||||||||| |||||||||||||| || ||| || ||| ||  ||||||||    
T  3693132 taagacc--atagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaacagcatagtcccttcgataattcat-tctcttcggaataaat 3693036  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||| ||||||||||| ||| |||||| | |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  3693035 aatgttttaagatcatagtcccttttcgatataataagaatgatcttaaacatatatattcttcttcaactcatggagaagttagatgttagaat 3692941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 4 - 297
Target Start/End: Complemental strand, 8888543 - 8888253
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||  || || ||||||||||| ||| ||||||||| |||||||||||||| |    
T  8888543 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagttcttctcatttttctactcatttctgtcccttcagaattaagagtgttct 8888445  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    ||||||||||  ||||||||||||| || |||||||||| ||| ||||||||||||||||||||||||||||| || ||| || ||| ||  ||||||||    
T  8888444 taagaccata--gtcccttttcggtttaatgtcccttcggaattaagaatggtcttaagagcatagtcccttcgataattcat-tctcttcggaataaat 8888348  T
Q  204 aatattttaagatcacagtcc-ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||| ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  8888347 aatgttttaagatcatagtcccttttcggtataataagaatgatcttaaacatatatattcttcttcaactcatggagaagttagatgttagaat 8888253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 4 - 297
Target Start/End: Complemental strand, 8883783 - 8883493
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||  || || ||||||||||||||| |||||||||||||||||||||||| |    
T  8883783 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagttcttctcatttttctactcctttctgtcccttcggaattaagagtgttct 8883685  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  |||||||||||||||| || |||||||||| ||| || |||||||||||||||||||| ||||| || ||| || ||| ||  ||||||||    
T  8883684 taagacc--atagtcccttttcggtttaatgtcccttcggaattaaaaatggtcttaagagcatagtaccttcgataattcat-tctcttcggaataaat 8883588  T
Q  204 aatattttaagatcacagt-ccttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||| ||||||||||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  8883587 aatgttttaagatcatagtcccttttcggtataataagaatgatcttaaacatatacattcttcttcaactcatggagaagttagatgttagaat 8883493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 4 - 297
Target Start/End: Original strand, 10585671 - 10585961
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||    
T  10585671 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtcgttctcctttttctactcctttctgtcccttcggaattaagagtgtttt 10585769  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  ||||||| |  ||||| |||| ||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  10585770 taagacc--atagtccatcatcggtttattatcctttcggaaataagaatggtcttaagagcatagtcccttcaattatttatgtctcattagaataaat 10585867  T
Q  204 aatattttaagatcacagtcc--ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |||||||||||||||  ||||  |||| ||||||||||  ||||||||||  ||||| ||||||||||||||| | |||||||| |||||||||||    
T  10585868 aatattttaagatcatggtccctttttcggtataataaagatgatcttaa--atatacattcttcttcaattcttggagaagttggatgttagaat 10585961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 13 - 297
Target Start/End: Complemental strand, 8070284 - 8070001
Alignment:
Q  13 ttttccctctcttctctctccttcgacttgtgttgacaagtcattttccttttt-ctactcctttttgtcccttcggaattaagagtgtttttaagacca 111  Q
    |||| ||||||||||| ||| ||||||||||||||||||||  || |||||||| |||||||||| |||||||||||||||||||||||| |||||||||    
T  8070284 tttttcctctcttctccctcattcgacttgtgttgacaagttcttctccttttttctactcctttctgtcccttcggaattaagagtgttcttaagacca 8070185  T
Q  112 tatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatatttt 211  Q
    ||  ||||||||||||| || |||||||||| ||| |||||||||||||| |||||||||||||| || ||| || ||| ||  ||||||||||| ||||    
T  8070184 ta--gtcccttttcggtttaatgtcccttcggaattaagaatggtcttaacagcatagtcccttcgataattcat-tctcttcggaataaataatgtttt 8070088  T
Q  212 aagatcacagtc-cttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||||| |||| ||||| | |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  8070087 aagatcatagtcgcttttcgatataataagaatgatcttaaacatatatattcttcttcaactcatggagaagttagatgttagaat 8070001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 45904023 - 45904316
Alignment:
Q  1 tgtttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttccttttt-ctactcctttttgtcccttcggaattaagagtg 99  Q
    |||||||| || |||||| ||||||||| ||||||  ||||||||||||||||  || |||||||| |||||||||| ||||||||||||||||||||||    
T  45904023 tgtttcctgtgcttttcc-tctcttctccctccttgtacttgtgttgacaagttcttctccttttttctactcctttctgtcccttcggaattaagagtg 45904121  T
Q  100 tttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaat 199  Q
    || |||||||||||  |||| |  ||||| || | ||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45904122 ttcttaagaccata--gtccatcgtcggtttactatcctttcggaaataagaatggtcttaagagcatagtcccttcaattatttatgtctctttagaat 45904219  T
Q  200 aaataatattttaagatcacagtcc-ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |||||||||||||||||||  |||| |||| ||||||||||  ||||||||||  ||||||||||||||||||||| | |||||||| |||||||||||    
T  45904220 aaataatattttaagatcatggtccattttcggtataataaagatgatcttaa--atatatattcttcttcaattcttggagaagttggatgttagaat 45904316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 78 - 297
Target Start/End: Original strand, 6595908 - 6596127
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    ||||||||||||||||||||| || |||||| |||||||||||||  ||||||||||||| |||| |||||||||||| ||||||||||||||||||||     
T  6595908 tgtcccttcggaattaagagtattcttaagatcatatagtcccttgccggtatattgtcctttcggaatcaagaatgggcttaagagcatagtcccttcg 6596007  T
Q  178 attatttatgtctttttagaataaataatattttaagatcacagtc-cttttaggtataataagaatgatcttaaacatatatattcttcttcaattcat 276  Q
    || ||| || ||| ||  |||||||||| ||||||| |||| |||| ||||| ||||||||||||||||||||||||| |||||||||| ||||||||||    
T  6596008 ataattcat-tctcttaggaataaataaaattttaaaatcatagtctctttttggtataataagaatgatcttaaacaaatatattcttattcaattcat 6596106  T
Q  277 agagaagttagatgttagaat 297  Q
     ||||||||||||||||||||    
T  6596107 ggagaagttagatgttagaat 6596127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 10 - 297
Target Start/End: Complemental strand, 53358709 - 53358420
Alignment:
Q  10 tgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttccttttt-----ctactcctttttgtcccttcggaattaagagtgttttt 104  Q
    ||||||| ||||||||||| ||||||||||||||||| || ||||||| ||||||||     ||||||||| | ||| ||||| ||||||||||||| ||    
T  53358709 tgttttttcctctcttctccctccttcgacttgtgttaacgagtcattctcctttttttttcctactccttct-gtctcttcgaaattaagagtgttatt 53358611  T
Q  105 aagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaata 204  Q
    |||| ||||  |||| |||||||| |||||||| |||| ||  ||||||||||||||||||||||||| ||||||||| ||||| | |||| ||||||||    
T  53358610 aagatcata--gtcctttttcggtttattgtcctttcgcaactaagaatggtcttaagagcatagtcctttcaattatatatgtttctttataataaata 53358513  T
Q  205 atattttaagatcacagtcc--ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |||||| |||||||  ||||  |||| ||||||||||||||||| ||||  | ||||| ||||||||||||| | || |||||||| ||||||||    
T  53358512 atatttgaagatcatggtccctttttcggtataataagaatgatattaa--aaatatactcttcttcaattcttggaaaagttagacgttagaat 53358420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 4 - 223
Target Start/End: Original strand, 39775185 - 39775401
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| |    
T  39775185 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtccttctcctttttctactcctttatgtcccttcggaattaagagtgttat 39775283  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    |||||||  |||||||||||| ||| || |||||||||| ||| |||||||||||||| | |||||||| | | || || ||||||  || |||||||||    
T  39775284 taagacc--atagtcccttttgggtttaatgtcccttcggaattaagaatggtcttaa-aacatagtccttgcgataatatatgtcccttcagaataaat 39775380  T
Q  204 aata-ttttaagatcacagtc 223  Q
    | || ||||||||||| ||||    
T  39775381 agtacttttaagatcatagtc 39775401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 14438172 - 14438326
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagtcc 119  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| ||||||| || ||||||||  |||||||    
T  14438172 tctcttctccctccttcgacttgtgttgacaagtccttctcctttttctactcctttctgtcccttcggaaataagagtattcttaagacc--atagtcc 14438269  T
Q  120 cttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    ||||||||| || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  14438270 cttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttc 14438326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 202
Target Start/End: Complemental strand, 18472644 - 18472450
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||| ||||| || |||||||||||||||||| | ||||||| ||| |||||||||| |    
T  18472644 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgataagtccttctcctttttctactcctttctatcccttcagaaataagagtgttct 18472546  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaa 202  Q
    |||||||  |||||||||||||||| || |||||||||  ||| |||||||||||||| | |||||||||||| || || ||||||  |||||||||||    
T  18472545 taagacc--atagtcccttttcggtttaatgtcccttcagaattaagaatggtcttaa-aacatagtcccttcgataatatatgtccctttagaataaa 18472450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 32473481 - 32473588
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  32473481 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtcattctcctttttctactcctttttgtcccttcggaattaagagtgttct 32473579  T
Q  104 taagaccat 112  Q
    |||||||||    
T  32473580 taagaccat 32473588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 121 - 274
Target Start/End: Complemental strand, 28125627 - 28125475
Alignment:
Q  121 ttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcaca 220  Q
    ||||||||||||||||  |||| ||| ||||||||||||||||||||||||| |||||||| |||||||| || |||||||||||||| ||||||||| |    
T  28125627 ttttcggtatattgtcatttcggaattaagaatggtcttaagagcatagtcctttcaattaattatgtctcttaagaataaataatatcttaagatcata 28125528  T
Q  221 gtcc-ttttaggtataataagaatgatcttaaacatatatattcttcttcaattc 274  Q
    ||||  ||| |||||||||||||||| |||||  | |||||||||||||||||||    
T  28125527 gtccactttcggtataataagaatgagcttaa--aaatatattcttcttcaattc 28125475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 76 - 259
Target Start/End: Original strand, 35456491 - 35456674
Alignment:
Q  76 tttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccctt 175  Q
    |||||||||||||||||| ||||||| |||||||| ||   | ||| ||||||||| |||||||||| ||| ||||||||||||||||||||| || |||    
T  35456491 tttgtcccttcggaattatgagtgttcttaagaccttaa--ttcctattcggtataatgtcccttcggaattaagaatggtcttaagagcataatctctt 35456588  T
Q  176 caattatttatgtctttttagaataaataatattttaagatcacagtc--cttttaggtataataagaatgatcttaaacatatat 259  Q
      ||  ||||||||   | | |||||||||||||||||||||| ||||   |||| ||||||||||||||||||||||| ||||||    
T  35456589 tgatagtttatgtcccatcaaaataaataatattttaagatcatagtctttttttcggtataataagaatgatcttaaaaatatat 35456674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 224
Target Start/End: Complemental strand, 18467850 - 18467645
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||            ||||||| ||||||||||||| |||||||||| |    
T  18467850 ttcctgtgtttttcc-tctcttctccctccttcgacttgtgttgacaagtcatt------------ctcctttctgtcccttcggaaataagagtgttct 18467764  T
Q  104 taagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaat 203  Q
    ||||| ||||  ||||||||||||| || |||||||||| ||| |||||||||||||| | |||||||||||| || || ||||||  || ||||||||     
T  18467763 taagatcata--gtcccttttcggtttaatgtcccttcggaattaagaatggtcttaa-aacatagtcccttcgataatatatgtcccttcagaataaag 18467667  T
Q  204 aata-ttttaagatcacagtcc 224  Q
    | || ||||||||||| |||||    
T  18467666 agtacttttaagatcatagtcc 18467645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 18699274 - 18699367
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || |||||||||||||||||| || | ||||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  18699274 tctcttctccctcttttgacttgtgttgacaagtctttcttctttttctactcccttctgtcccttcggaattaagagtgttcttaagaccata 18699367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 161
Target Start/End: Complemental strand, 20520523 - 20520438
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaa 161  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||||||||||| || |||||||||| ||| ||||||| ||||||    
T  20520523 tttttgtcccttcggaattaagagtgttcttaagacc--atagtcccttttcggtttaatgtcccttcggaattaagaatgatcttaa 20520438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 7570748 - 7570844
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtccctttt-cggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccctt 175  Q
    |||||||||||| ||||||||||| |||||||||||  ||||||||| |||| || |||||||||||||| |||||||||||||| | |||||||||||    
T  7570748 tgtcccttcggatttaagagtgttcttaagaccata--gtccctttttcggtttaatgtcccttcgaaattaagaatggtcttaaaaacatagtccctt 7570844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 12965419 - 12965515
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    ||||||||||||||||||| |||| | |||||||||   |||||||||||| || |||||||||||||| |||||||||||||||  ||||||||||||    
T  12965419 tgtcccttcggaattaagaatgttctgaagaccatac--tcccttttcggtttaatgtcccttcgaaattaagaatggtcttaagttcatagtcccttc 12965515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 24037903 - 24037999
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||| ||||||||||| |||||||||||  ||| ||||||||| || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  24037903 tgtcccttcggatttaagagtgttcttaagaccata--gtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttc 24037999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 49019873 - 49019798
Alignment:
Q  151 aatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcacagtcctt 226  Q
    |||||||||| ||| ||||||||||||||||||||||||  |||| |||||||||||||||||||||| |||||||    
T  49019873 aatggtcttaggagtatagtcccttcaattatttatgtccctttaaaataaataatattttaagatcatagtcctt 49019798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 12900640 - 12900742
Alignment:
Q  122 tttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcacag 221  Q
    ||||||||||  ||||| ||  ||| ||| ||||||||||||||||||| |||| |||||||||||| | ||||||| ||||||||||||||||||| ||    
T  12900640 tttcggtataacgtcccctcagaattaagcatggtcttaagagcatagttccttgaattatttatgtttctttagaaaaaataatattttaagatcatag 12900739  T
Q  222 tcc 224  Q
    |||    
T  12900740 tcc 12900742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 18011847 - 18011749
Alignment:
Q  113 atagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatatttt 211  Q
    |||||| | ||||| |||||||||||||||||||||| ||||||||||| | |||||||||||| || |||||||||  || | |||||||||||||||    
T  18011847 atagtctcatttcgttatattgtcccttcgaaatcaaaaatggtcttaaaaacatagtcccttcgataatttatgtcgcttcaaaataaataatatttt 18011749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 23660997 - 23661092
Alignment:
Q  79 gtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    ||||||||||| ||||||||||| |||||||||||  ||| ||||||||| || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  23660997 gtcccttcggatttaagagtgttcttaagaccata--gtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttc 23661092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 757896 - 758006
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtccctttt-cggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||| ||||||||||| |||||||||||  ||||||||| |||| || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  757896 tgtcccttcggatttaagagtgttcttaagaccata--gtccctttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttc 757993  T
Q  177 aattatttatgtc 189  Q
     || || ||||||    
T  757994 gataatatatgtc 758006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 4106822 - 4106911
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  4106822 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 4106911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 4110674 - 4110763
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  4110674 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 4110763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 8488886 - 8488979
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| || ||||||||    
T  8488886 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttcagaccata 8488979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 15965653 - 15965564
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  15965653 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 15965564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 15969577 - 15969488
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  15969577 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 15969488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 15973501 - 15973412
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  15973501 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 15973412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 16749416 - 16749505
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  16749416 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 16749505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 19776483 - 19776394
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  19776483 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 19776394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 23665655 - 23665751
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||| ||||||||||| |||||||||||  ||| ||||| ||| || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  23665655 tgtcccttcggatttaagagtgttcttaagaccata--gtcgctttttggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttc 23665751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 224
Target Start/End: Complemental strand, 29350803 - 29350660
Alignment:
Q  79 gtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaa 178  Q
    ||||||||| ||||||||||||| |||||| ||||  ||||||||||||| || |||||||| | ||| || ||||||||||| | |||||||||||| |    
T  29350803 gtcccttcgaaattaagagtgttcttaagatcata--gtcccttttcggtttaatgtccctttggaattaataatggtcttaa-aacatagtcccttcga 29350707  T
Q  179 ttatttatgtctttttagaataaataata-ttttaagatcacagtcc 224  Q
    | || ||||||  || |||||||| |||| ||||||||||| |||||    
T  29350706 taatatatgtcccttcagaataaagaatatttttaagatcatagtcc 29350660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 74 - 158
Target Start/End: Original strand, 3656757 - 3656840
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtccc-ttttcggtatattgtcccttcgaaatcaagaatggtct 158  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||| |||||||| || ||||||||||||||  ||||||||||    
T  3656757 tttttgtcccttcggaattaagagtgttcttaagacc--atagtccctttttcggtttaatgtcccttcgaaattcagaatggtct 3656840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 14671991 - 14671898
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| | || || | ||||||||||||| || ||||||||||||||||| |||||| |||||||||||    
T  14671991 tctcttctccctcttttgacttgtgttgacgaatctttcttctttttctactcccttctgtcccttcggaattaaaagtgttcttaagaccata 14671898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 22758676 - 22758769
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | ||||||||||| | || |||||||||| ||||||||||||| |||||||||||    
T  22758676 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactaccttctgtcccttcgaaattaagagtgttcttaagaccata 22758769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 9707087 - 9707174
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaag 107  Q
    ||||||||| ||| || |||||| |||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||    
T  9707087 tctcttctccctcttttgacttgggttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaag 9707174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 176
Target Start/End: Complemental strand, 27709494 - 27709398
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||| ||||||||||||| |||||||||||  || |||||| ||| || |||| ||||| ||| |||||||||||||| | ||||||||||||    
T  27709494 tgtcccttcgaaattaagagtgttcttaagaccata--gttcctttttggtttaatgtctcttcggaattaagaatggtcttaaaaacatagtcccttc 27709398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 37439056 - 37439149
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || |  ||||||||||||||| ||||| ||||||||||| |||||| || ||||||||    
T  37439056 tctcttctccctcttttgacttgtgttgacgagtctttcttatttttctactcctttctgtccattcggaattaaaagtgttcttgagaccata 37439149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 3419552 - 3419459
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtccc-ttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcc 172  Q
    |||||||||||||||||| ||||| ||||||||  |||||||| |||||||| || ||| |||||| ||| |||||||||||||| | ||||||||    
T  3419552 tgtcccttcggaattaagggtgttcttaagacc--atagtccctttttcggtttaatgttccttcggaattaagaatggtcttaaaaacatagtcc 3419459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 224
Target Start/End: Complemental strand, 55326339 - 55326196
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||||||||||||||||| ||||||||  |||||| |||||||||  | ||| |||||| ||| |||||||||||||| | |||| |||||||     
T  55326339 tgtcccttcggaattaagagtgttcttaagacc--atagtcgcttttcggttgaatgt-ccttcggaattaagaatggtcttaa-aacataatcccttcg 55326244  T
Q  178 attatttatgtctttttagaataaataata-ttttaagatcacagtcc 224  Q
    || || ||||||  || |||||||| | || ||||||||||| |||||    
T  55326243 ataatatatgtcccttcagaataaagagtacttttaagatcatagtcc 55326196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 19339822 - 19339739
Alignment:
Q  128 tatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatatttt 211  Q
    |||||||||||||| |||| |||||||||||||| | |||||| | |||||| |||||||||  || | |||||||||||||||    
T  19339822 tatattgtcccttcaaaattaagaatggtcttaaaaccatagttcattcaataatttatgtcgcttcaaaataaataatatttt 19339739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 2207331 - 2207416
Alignment:
Q  133 tgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataata-ttttaagatca 218  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||| || ||||||| ||  ||||||| | || |||||||||||    
T  2207331 tgtcccttcgaaattaagaatggtcttaa-agcatagtcccttcaataatatatgtctcttcggaataaagagtacttttaagatca 2207416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 218
Target Start/End: Complemental strand, 46964570 - 46964435
Alignment:
Q  83 cttcggaattaagagtgtttttaagaccatatagtccc-ttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaatta 181  Q
    ||||||||||||||||||| ||||||||  |||||||| |||||||| || ||||||||   ||| |||||||||||||| | ||||||| |||| || |    
T  46964570 cttcggaattaagagtgttcttaagacc--atagtccctttttcggtttaatgtccctttagaattaagaatggtcttaaaaacatagtctcttcgataa 46964473  T
Q  182 tttatgtctttttagaataaataata-ttttaagatca 218  Q
    | ||||||  || |||||||| | || |||||||||||    
T  46964472 tatatgtcccttcagaataaagagtacttttaagatca 46964435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 55431845 - 55431782
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcga 143  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||| || ||| |||||||    
T  55431845 tgtcccttcggaattaagagtgttcttaagacc--atagtcccttttcggtttaatgtaccttcga 55431782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 43888597 - 43888690
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | ||||||||||| | || || ||||||| |||||| |||||| |||||||||||    
T  43888597 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctacttccttctgccccttcgaaattaatagtgttcttaagaccata 43888690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 211
Target Start/End: Original strand, 17025636 - 17025765
Alignment:
Q  80 tcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaat 179  Q
    ||||||| || ||||||||||| |||||||| |   |||| | ||||||||||| |||||||||||| ||||| | |||||||| |||||| ||||| ||    
T  17025636 tcccttcagatttaagagtgttcttaagaccttc--gtccatgttcggtatattatcccttcgaaattaagaaagttcttaagaacatagttccttcgat 17025733  T
Q  180 tatttatgtctttttagaataaataatatttt 211  Q
     || ||||||  || |||||||| | ||||||    
T  17025734 aatatatgtcccttcagaataaaaagtatttt 17025765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 48431937 - 48431985
Alignment:
Q  128 tatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||||||    
T  48431937 tataatgtcccttcgaaattaagaatggtcttaagaacatagtcccttc 48431985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 29828 - 29761
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| || ||||||||||| ||||| |||| || | |||||||||||||||| ||||||||    
T  29828 cctctcttctcccttcttcgacttgtcttgacgagtctttattctttttctactcctttatgtccctt 29761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 8223535 - 8223468
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| || ||| ||||||||||||| |||| || | |||||||||||||||| ||||||||    
T  8223535 cctctcttctcccttctttgacttgtgttgacgagtctttcttctttttctactcctttatgtccctt 8223468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 18350271 - 18350336
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||    
T  18350271 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtccctt 18350336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 21494116 - 21494180
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| |||||||||||||||||||| |||| ||   ||| |||||||||||| ||||||||    
T  21494116 cctctcttctccctccttcgacttgtgttgacgagtcctt---cttcttctactcctttctgtccctt 21494180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 4662620 - 4662577
Alignment:
Q  133 tgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||    
T  4662620 tgtcccttcggaattaagaatggtcttaagaacatagtcccttc 4662577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 6025437 - 6025382
Alignment:
Q  30 ctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    |||||||||||||||||||||| || || |  || |||||||||||||||||||||    
T  6025437 ctccttcgacttgtgttgacaattccttctttttcttctactcctttttgtccctt 6025382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 8197052 - 8196985
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||| ||||| || ||| ||||||||||||| |||| || | |||||||||||||||| ||||||||    
T  8197052 cctcttttctcccttctttgacttgtgttgacgagtctttcttctttttctactcctttctgtccctt 8196985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 16983417 - 16983375
Alignment:
Q  133 tgtcccttcgaaatcaagaatggtcttaagagcatagtccctt 175  Q
    |||||||||| ||| |||||||||||||||| |||||||||||    
T  16983417 tgtcccttcggaattaagaatggtcttaagaacatagtccctt 16983375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 47408686 - 47408645
Alignment:
Q  13 ttttccctctcttctctctccttcgacttgtgttgacaagtc 54  Q
    |||| ||||||||||| |||||||||||||||||||| ||||    
T  47408686 tttttcctctcttctccctccttcgacttgtgttgacgagtc 47408645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 1640531 - 1640567
Alignment:
Q  139 ttcgaaatcaagaatggtcttaagagcatagtccctt 175  Q
    |||||||| |||||||||||||||| |||||||||||    
T  1640531 ttcgaaattaagaatggtcttaagatcatagtccctt 1640567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 26707045 - 26706990
Alignment:
Q  34 ttcgacttgtgttgacaagtcatt-ttccttt-ttctactcctttttgtcccttcgg 88  Q
    ||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||||    
T  26707045 ttcgacttgtgttgagaagtcattcttcctttcttctactcc-ttttgtcccttcgg 26706990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 142; Significance: 2e-74; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 18 - 297
Target Start/End: Original strand, 52411 - 52689
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagt 117  Q
    ||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||||||| |||||||||||||| ||||||||  |||||    
T  52411 cctctcttctccctccttcgacttgtgttgacaagtcgttctcctttttctactcctttctgtcccttcagaattaagagtgttcttaagacc--atagt 52508  T
Q  118 cccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatc 217  Q
    || |  ||||| |||| ||| |||| ||  ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  52509 ccatcgtcggtttattatcctttcggaaataagaatggtcttaagagtatagtcccttcaattatttatgtctctttagaataaataatattttaagatc 52608  T
Q  218 acagtcc-ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |  |||| |||| ||||||||||  ||||| ||  | ||||| || |||||||||||| | ||||||||||||||||||||    
T  52609 atggtccgttttcggtataataaagatgattttttaaatataaatacttcttcaattcttggagaagttagatgttagaat 52689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 218
Target Start/End: Original strand, 47467 - 47665
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccatatagt 117  Q
    ||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| |||||||||||  ||    
T  47467 cctctcttctccctccttcgacttgtgttgacaagtcgttctcctttttctactcctttctgtcccttcggaattaagagtgttcttaagaccata--gt 47564  T
Q  118 cccttttcggtatattgtcccttc-gaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagat 216  Q
    || |  ||||| |||| ||| ||| ||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  47565 ccatcgtcggtttattatcctttcagaaat-aagaatggtcttaagagcatagccccttcaattatttatgtctctttagaataaataatattttaagat 47663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 18 - 297
Target Start/End: Original strand, 734 - 1012
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttccttttt-ctactcctttttgtcccttcggaattaagagtgtttttaagaccatatag 116  Q
    ||||||||||| ||||||||||||||||||||||||| || |||||||| |||||||||| ||||||||||||||||| |||||| |||||| ||||  |    
T  734 cctctcttctccctccttcgacttgtgttgacaagtccttctccttttttctactcctttctgtcccttcggaattaaaagtgttcttaagatcata--g 831  T
Q  117 tcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagat 216  Q
    ||| |  ||||| |||| ||| |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  832 tccatcgtcggtttattatcctttcgaaaataagaatggtcttaagagcatagtcccttcaattatttatgtctctttagaataaataatattttaagat 931  T
Q  217 cacagtcc--ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||  ||||  |||| | ||||||||  ||||||||||  ||||||||||||||||||||| | ||||| || |||||||||||    
T  932 catggtccctttttcgttataataaagatgatcttaa--atatatattcttcttcaattcttggagaatttggatgttagaat 1012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 18 - 293
Target Start/End: Original strand, 35198 - 35472
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttccttttt-ctactcctttttgtcccttcggaattaagagtgtttttaagaccatatag 116  Q
    ||||||||||| |||||||||||| |||||||||||| || |||||||| |||||||||| | |||||||||||||||||||||| |||||||||||       
T  35198 cctctcttctccctccttcgacttatgttgacaagtccttctccttttttctactcctttctatcccttcggaattaagagtgttcttaagaccataa-- 35295  T
Q  117 tcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagat 216  Q
    ||| |  ||| | |||| ||| |||| ||  || |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  35296 tccatcgtcgttttattatcctttcggaaataaaaatggtcttaagagcatagtcccttcaattatttatgtatgtttagaataaataatattttaagat 35395  T
Q  217 cacagtcc--ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgtta 293  Q
    ||  ||||  |||| ||||||||||  ||||||||||  ||||||||||||||||||||| | |||||||| |||||||    
T  35396 catggtccctttttcggtataataaagatgatcttaa--atatatattcttcttcaattcttggagaagttggatgtta 35472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 148 - 297
Target Start/End: Complemental strand, 46250 - 46101
Alignment:
Q  148 aagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcacagtcc--ttttaggtataataagaatga 245  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||  ||||  |||| ||||||||||  ||||    
T  46250 aagaatggtcttaagaccatagtcccttcaattatttatgtctctttagaataaataatgttttaagatcatggtccctttttcggtataataaagatga 46151  T
Q  246 tcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||||  ||||||||||||||||||||| ||||||||||  ||||||||||    
T  46150 tcttaa--atatatattcttcttcaattcttagagaagttgtatgttagaat 46101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 49465 - 49573
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| || |||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| |    
T  49465 ttcctgtgtttttcc-tctcttctcccttcttcgacttgtgttgacaagtcgttctcctttttctactcctttctgtcccttcggaattaagagtgttct 49563  T
Q  104 taagaccata 113  Q
    ||||||||||    
T  49564 taagaccata 49573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 148 - 297
Target Start/End: Original strand, 152537 - 152686
Alignment:
Q  148 aagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagatcacagtcc--ttttaggtataataagaatga 245  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||  ||||  |||| ||||||||||  ||||    
T  152537 aagaatggtcttaagaccatagtcccttcaattatttatgtctctttagaataaataatgttttaagatcatggtccctttttcggtataataaagatga 152636  T
Q  246 tcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    ||||||  ||||||||||||||||||||| ||||||||||  ||||||||||    
T  152637 tcttaa--atatatattcttcttcaattcttagagaagttgtatgttagaat 152686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 149169 - 149061
Alignment:
Q  4 ttcctatgtttttccctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttt 103  Q
    ||||| ||||||||| ||||||||| || |||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| |    
T  149169 ttcctgtgtttttcc-tctcttctcccttcttcgacttgtgttgacaagtcgttctcctttttctactcctttctgtcccttcggaattaagagtgttct 149071  T
Q  104 taagaccata 113  Q
    ||||||||||    
T  149070 taagaccata 149061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 259
Target Start/End: Complemental strand, 6988 - 6748
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttccttttt-ctactcctttttgtcccttcggaattaagagtgtttttaagaccatatag 116  Q
    ||||||||||| ||||||||||||||||     ||||||| |||||||| ||||||||| | ||||||||||||||||||||||| |||||||||||       
T  6988 cctctcttctccctccttcgacttgtgtcagtgagtcattctcctttttgctactccttct-gtcccttcggaattaagagtgttcttaagaccataa-- 6892  T
Q  117 tcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttcaattatttatgtctttttagaataaataatattttaagat 216  Q
    ||||| ||| || || ||||| |||  ||   |||||||| |||||||||||||| ||||| || ||||||||| |||||||||||||| ||||||||||    
T  6891 tccctcttctgtttaatgtcctttcagaacatagaatggttttaagagcatagtctcttcattt-tttatgtctctttagaataaataacattttaagat 6793  T
Q  217 cacagtcc--ttttaggtataataagaatgatcttaaacatatat 259  Q
    ||  ||||  | || ||||| |||||||||||||| || ||||||    
T  6792 catggtcccttgttcggtatgataagaatgatcttgaaaatatat 6748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 78 - 224
Target Start/End: Complemental strand, 7670 - 7526
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||||||| || |||||||||||||| |||||||||||||| | ||||||||||||     
T  7670 tgtcccttcggaattaagagtgttattaagaccata--gtcccttttcggtttaatgtcccttcgaaattaagaatggtcttaa-aacatagtcccttcg 7574  T
Q  178 attatttatgtctttttagaataaataata-ttttaagatcacagtcc 224  Q
    || || ||||||| || |||||||| | || ||||||||||| |||||    
T  7573 ataatatatgtctcttcagaataaagagtacttttaagatcatagtcc 7526  T

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Target: scaffold0008 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 78 - 207
Target Start/End: Complemental strand, 256353 - 256226
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttca 177  Q
    ||||| ||||||||||||| |||| |||||||| ||  ||||||||||||| ||||||||||||  ||| ||||||||| ||||| ||| | ||||||||    
T  256353 tgtccattcggaattaagaatgttcttaagaccgta--gtcccttttcggtttattgtcccttcagaataaagaatggtattaagtgcacattcccttca 256256  T
Q  178 attatttatgtctttttagaataaataata 207  Q
    ||||||||||||| || |||||||||||||    
T  256255 attatttatgtctcttcagaataaataata 256226  T

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Target: scaffold0008; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 256219 - 256149
Alignment:
Q  225 ttttaggtataataagaatgatcttaaacatatatattcttcttcaattcatagagaagttagatgttagaat 297  Q
    |||| |||||||||||||||||||||||  |||||  |||||||| |||| |||||| |||| ||||||||||    
T  256219 ttttcggtataataagaatgatcttaaaagtatat--tcttcttcgattcttagagatgttacatgttagaat 256149  T

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Target: scaffold0054 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 26023 - 25923
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccc 173  Q
    |||| ||||||||||||||| || |||| |||||||||||  ||||||||||||| || |||||||||||||| |||||||||||||| | |||||||||    
T  26023 ttttcgtcccttcggaattacgattgttcttaagaccata--gtcccttttcggtttaatgtcccttcgaaattaagaatggtcttaaaaacatagtccc 25926  T
Q  174 ttc 176  Q
    |||    
T  25925 ttc 25923  T

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Target: scaffold0054; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 78 - 175
Target Start/End: Complemental strand, 29738 - 29643
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccctt 175  Q
    |||||||||||||||||||||||| |||||| |||||  ||||| |||||| || |||||||||  ||| |||||||||||||| | |||||||||||    
T  29738 tgtcccttcggaattaagagtgttcttaagatcatat--tccctcttcggtttaatgtcccttcagaattaagaatggtcttaaaaacatagtccctt 29643  T

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Target: scaffold0011 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 145961 - 146100
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtccctttt-cggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    ||||||||||||||||||||| || |||||| ||||  ||||||||| ||||||| ||||| ||| |||  ||||||||| |||||||||||||||||||    
T  145961 tgtcccttcggaattaagagt-ttcttaagagcata--gtccctttttcggtataatgtccattcaaaaataagaatggttttaagagcatagtcccttc 146057  T
Q  177 aat-tatttatgtctttttagaataaataatattttaagatca 218  Q
     || | |||||||| ||| |||||| |||||||||||||||||    
T  146058 gatatttttatgtcctttcagaatatataatattttaagatca 146100  T

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Target: scaffold0011; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 127001 - 126908
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | ||||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  127001 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcccttctgtcccttcggaattaagagtgttcttaagaccata 126908  T

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Target: scaffold0292 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 7765 - 7672
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||| |||||| ||||||||||||||||||||||||||| |||||||||||    
T  7765 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttatactcccttttgtcccttcggaattaagagtgttcttaagaccata 7672  T

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Target: scaffold0018 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 21905 - 21812
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | ||||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  21905 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcccttctgtcccttcggaattaagagtgttcttaagaccata 21812  T

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Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 171352 - 171397
Alignment:
Q  131 attgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||| ||| |||||||||||||||| | ||||||||||    
T  171352 attgtcccttcggaattaagaatggtcttaagaacgtagtcccttc 171397  T

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Target: scaffold0002 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 78 - 224
Target Start/End: Complemental strand, 4627 - 4482
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtat-attgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||||||||||||||| ||||||||  ||||||||| |||||| | | |||||||||| ||| |||||||||||||||  ||||||||||||    
T  4627 tgtcccttcggaattaagagtgttcttaagacc--atagtccctattcggtttaaatgtcccttcggaattaagaatggtcttaagttcatagtcccttc 4530  T
Q  177 aat-tatttatgtctttttagaataaataatattttaagatcacagtcc 224  Q
     || | ||||||||  ||  |||||||||||| |||||||||| |||||    
T  4529 gatatttttatgtc-cttcggaataaataataatttaagatcatagtcc 4482  T

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Target: scaffold0002; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 202
Target Start/End: Original strand, 443471 - 443596
Alignment:
Q  74 tttttgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtccc 173  Q
    ||||||||||||||||||||| |||||| ||||||||  ||||||||||||| || || ||| |||||| ||| |||||||||||||| | |||||||||    
T  443471 tttttgtcccttcggaattaatagtgttcttaagacc--atagtcccttttcagtttaatgttccttcggaattaagaatggtcttaa-aacatagtccc 443567  T
Q  174 ttcaattatttatgtctttttagaataaa 202  Q
    ||| || || ||||||  || ||||||||    
T  443568 ttcgataatatatgtcccttcagaataaa 443596  T

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Target: scaffold0572 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 10472 - 10561
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  10472 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 10561  T

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Target: scaffold0452 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 12464 - 12557
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | ||||||||||||| || |||||||||||||| ||||||||| |||||||||||    
T  12464 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcccttctgtcccttcggaataaagagtgttattaagaccata 12557  T

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Target: scaffold0415 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 1086 - 997
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  1086 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 11792 - 11699
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||| ||||||||| ||||||||||||||||| |||||| |||||||||||    
T  11792 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttatactcctttctgtcccttcggaattaaaagtgttcttaagaccata 11699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 10922 - 11011
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  10922 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 11011  T

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Target: scaffold0157 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 32081 - 32170
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  32081 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 32170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 13508 - 13597
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  13508 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 13597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 21482 - 21571
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  21482 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 21571  T

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Target: scaffold0031 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 35507 - 35596
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  35507 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtcccttcggaattaaaagtgttcttaagac 35596  T

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Target: scaffold0240 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 176
Target Start/End: Complemental strand, 4537 - 4442
Alignment:
Q  78 tgtcccttcggaattaagagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcccttc 176  Q
    |||||||||||||||||| ||||| ||||||||  ||||| | ||||||||||| |||||||||| ||| |||||| ||||||| ||||||||||||||    
T  4537 tgtcccttcggaattaagtgtgttcttaagacc--atagttcattttcggtataatgtcccttcggaattaagaat-gtcttaaaagcatagtcccttc 4442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 121164 - 121071
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | ||||||||||||| || |||||||| ||||||||||||||| | |||||||||    
T  121164 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcccttctgtccctttggaattaagagtgttctgaagaccata 121071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 59026 - 58942
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcc-tttttctactcctttttgtcccttcggaattaagagtgtt 101  Q
    |||||||||||  |||||||||||||||||| ||||| || ||| ||||||||||||||| ||||| || |||||||||||||||    
T  59026 cctctcttctccgtccttcgacttgtgttgagaagtcgttctccttttttctactcctttctgtccttttggaattaagagtgtt 58942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 30865 - 30775
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaa-ttaagagtgtttttaagac 109  Q
    ||||||||| ||| || |||||||||| || |||| || | |||||||||||||||| ||||||||||||| ||||||||||| |||||||    
T  30865 tctcttctccctcttttgacttgtgttaacgagtctttcttctttttctactcctttctgtcccttcggaatttaagagtgttcttaagac 30775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 30282 - 30192
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaa-ttaagagtgtttttaagac 109  Q
    ||||||||| ||| || |||||||||| || |||| || | |||||||||||||||| ||||||||||||| ||||||||||| |||||||    
T  30282 tctcttctccctcttttgacttgtgttaacgagtctttcttctttttctactcctttctgtcccttcggaatttaagagtgttcttaagac 30192  T

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Target: scaffold0575 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 5377 - 5470
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagaccata 113  Q
    ||||||||| ||| || ||||||||||||| |||| || | ||||||||||||| || |||||||||| |||||| |||||| || ||||||||    
T  5377 tctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcccttctgtcccttcgaaattaaaagtgttcttcagaccata 5470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 22307 - 22218
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcggaattaagagtgtttttaagac 109  Q
    ||||||||| ||| || ||||||||||||| |||| || | ||||| ||||||| || ||||||||||||||||| |||||| |||||||    
T  22307 tctcttctccctcttttgacttgtgttgacgagtctttcttcttttcctactcccttctgtcccttcggaattaatagtgttcttaagac 22218  T

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Target: scaffold0015 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 193761 - 193828
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| || ||||||||||||||||| |||| || | |||||||||||||||| ||||||||    
T  193761 cctctcttctcccttcttcgacttgtgttgacgagtctttcttctttttctactcctttctgtccctt 193828  T

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Target: scaffold0015; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 188077 - 188133
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactccttt 76  Q
    ||||||||| ||| || ||||||||||||| |||| || ||||||||||||||||||    
T  188077 tctcttctccctcttttgacttgtgttgacgagtctttctcctttttctactccttt 188133  T

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Target: scaffold0226 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 5844 - 5943
Alignment:
Q  74 tttttgtcccttcggaattaa-gagtgtttttaagaccatatagtcccttttcggtatattgtcccttcgaaatcaagaatggtcttaagagcatagtcc 172  Q
    |||| ||||||||||| |||| ||||||||||||| |||||  |||||||     |||| |||||||||||||| |||||||||||||||| ||||||||    
T  5844 ttttagtcccttcggatttaaagagtgtttttaaggccata--gtcccttcggtttataatgtcccttcgaaattaagaatggtcttaagaacatagtcc 5941  T

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Target: scaffold1910 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 464 - 399
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||| ||| |||||||||||||||| |||| || | |||||||||||||||| ||||||||    
T  464 tctcttctccctctttcgacttgtgttgacgagtctttcttctttttctactcctttctgtccctt 399  T

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Target: scaffold0357 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 3841 - 3908
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| || ||||||||| ||||||| |||| || | |||||||||||||||| ||||||||    
T  3841 cctctcttctcccttcttcgacttatgttgacgagtctttcttctttttctactcctttctgtccctt 3908  T

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Target: scaffold0155 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 22275 - 22208
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| || |||||| ||||||||||||||| || | |||||||||||||||| | ||||||    
T  22275 cctctcttctcccttcttcgatttgtgttgacaagtctttcttctttttctactcctttctatccctt 22208  T

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Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 199792 - 199729
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtc 81  Q
    ||||||||||| || ||||||||||||||||| |||| || | |||||||||||||||| ||||    
T  199792 cctctcttctcccttcttcgacttgtgttgacgagtctttcttctttttctactcctttctgtc 199729  T

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Target: scaffold0327 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 19717 - 19783
Alignment:
Q  19 ctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    |||||||||| ||  |||||||||||||||| |||| || | |||||||||||||||| ||||||||    
T  19717 ctctcttctccctttttcgacttgtgttgacgagtctttattctttttctactcctttctgtccctt 19783  T

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Target: scaffold0067 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 33774 - 33842
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcccttcgg 88  Q
    ||||||||| |||||||||||||||||||| | || || | ||  |||| |||||||||||||||||||    
T  33774 tctcttctccctccttcgacttgtgttgacgattccttcttctgcttctgctcctttttgtcccttcgg 33842  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 81158 - 81094
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtcc 82  Q
    ||||||||||| || ||||||||||| ||||| |||| || | |||||||||||||||| |||||    
T  81158 cctctcttctcccttcttcgacttgtcttgacgagtctttcttctttttctactcctttctgtcc 81094  T

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Target: scaffold0044; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 64760 - 64693
Alignment:
Q  18 cctctcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||||||| ||  |||||||||| ||||| |||| || | |||||||||||||||| ||||||||    
T  64760 cctctcttctccctttttcgacttgtcttgacgagtctttcttctttttctactcctttctgtccctt 64693  T

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Target: scaffold0991 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 294 - 231
Alignment:
Q  22 tcttctctctccttcgacttgtgttgacaagtcattttcctttttctactcctttttgtccctt 85  Q
    ||||||| || ||||||||||| ||||| |||| || | |||||||||||||||| ||||||||    
T  294 tcttctcccttcttcgacttgtcttgacgagtctttcttctttttctactcctttctgtccctt 231  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 70415 - 70449
Alignment:
Q  20 tctcttctctctccttcgacttgtgttgacaagtc 54  Q
    ||||||||| |||||||||||||||||||||||||    
T  70415 tctcttctccctccttcgacttgtgttgacaagtc 70449  T

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Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 71727 - 71673
Alignment:
Q  22 tcttctctctccttcgacttgtgttgacaagtcattttccttt-ttctactcctt 75  Q
    ||||||| ||||||||||||||||||||||||  | ||||||| |||||||||||    
T  71727 tcttctccctccttcgacttgtgttgacaagttttcttcctttcttctactcctt 71673  T

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Target: scaffold0009; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 163987 - 164033
Alignment:
Q  91 ttaagagtgtttttaagaccatatagtcccttttcggtatattgtccct 139  Q
    ||||||||||| |||||||||||  |||||| |||||||||||||||||    
T  163987 ttaagagtgttcttaagaccata--gtccctgttcggtatattgtccct 164033  T

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