View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20611_high_25 (Length: 214)

Name: NF20611_high_25
Description: NF20611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20611_high_25
NF20611_high_25
[»] chr6 (29 HSPs)
chr6 (11-191)||(24588504-24588684)
chr6 (23-129)||(16625016-16625122)
chr6 (38-128)||(6112148-6112238)
chr6 (23-126)||(15704302-15704405)
chr6 (38-126)||(19772403-19772491)
chr6 (38-126)||(31477095-31477183)
chr6 (39-121)||(22949848-22949930)
chr6 (39-121)||(22953804-22953886)
chr6 (39-121)||(23872292-23872374)
chr6 (39-121)||(23876248-23876330)
chr6 (39-126)||(16760998-16761086)
chr6 (23-126)||(27324452-27324553)
chr6 (23-126)||(2077412-2077515)
chr6 (39-126)||(22806967-22807054)
chr6 (23-129)||(27073585-27073691)
chr6 (23-129)||(26981195-26981301)
chr6 (42-127)||(14073754-14073839)
chr6 (55-126)||(15991086-15991157)
chr6 (51-129)||(2862860-2862938)
chr6 (22-127)||(18387531-18387636)
chr6 (51-125)||(15640938-15641012)
chr6 (127-176)||(28963737-28963786)
chr6 (73-124)||(2759769-2759820)
chr6 (128-173)||(15509448-15509493)
chr6 (82-126)||(14322801-14322845)
chr6 (51-102)||(2882190-2882241)
chr6 (22-61)||(17963991-17964030)
chr6 (124-173)||(29157067-29157116)
chr6 (55-111)||(15645330-15645386)
[»] chr5 (36 HSPs)
chr5 (22-128)||(557295-557401)
chr5 (22-128)||(36936900-36937006)
chr5 (23-128)||(41997264-41997369)
chr5 (23-128)||(42002033-42002138)
chr5 (22-128)||(562067-562173)
chr5 (22-128)||(36941654-36941760)
chr5 (38-128)||(13300879-13300969)
chr5 (32-129)||(36949394-36949491)
chr5 (22-128)||(31732136-31732242)
chr5 (22-124)||(32460937-32461039)
chr5 (23-126)||(10754050-10754153)
chr5 (32-126)||(21323367-21323461)
chr5 (38-128)||(23976976-23977066)
chr5 (22-129)||(21826822-21826929)
chr5 (46-125)||(3666536-3666615)
chr5 (22-128)||(12044519-12044630)
chr5 (22-129)||(26869702-26869809)
chr5 (22-112)||(8770842-8770932)
chr5 (63-124)||(15395233-15395294)
chr5 (128-173)||(3667038-3667083)
chr5 (32-129)||(24435571-24435668)
chr5 (124-174)||(12044013-12044064)
chr5 (124-173)||(557857-557907)
chr5 (124-173)||(562627-562677)
chr5 (63-129)||(41099170-41099236)
chr5 (127-173)||(42002598-42002645)
chr5 (124-173)||(36936393-36936443)
chr5 (124-173)||(36941147-36941197)
chr5 (124-173)||(41997804-41997854)
chr5 (22-61)||(26667902-26667941)
chr5 (22-61)||(26939499-26939538)
chr5 (22-61)||(29167405-29167444)
chr5 (22-61)||(36424262-36424301)
chr5 (124-173)||(32460427-32460477)
chr5 (58-98)||(1429584-1429624)
chr5 (11-59)||(6154867-6154915)
[»] chr3 (52 HSPs)
chr3 (22-128)||(3034242-3034348)
chr3 (22-128)||(3693217-3693323)
chr3 (22-128)||(8888529-8888635)
chr3 (22-128)||(3673185-3673291)
chr3 (22-128)||(8070278-8070384)
chr3 (22-128)||(8883769-8883875)
chr3 (22-128)||(10585579-10585685)
chr3 (23-126)||(9706982-9707085)
chr3 (23-126)||(16749311-16749414)
chr3 (23-126)||(19776485-19776588)
chr3 (22-129)||(6595781-6595888)
chr3 (23-129)||(18350163-18350269)
chr3 (38-126)||(22758571-22758659)
chr3 (33-129)||(51922944-51923040)
chr3 (22-129)||(8223534-8223641)
chr3 (22-129)||(14425231-14425338)
chr3 (39-126)||(37438951-37439038)
chr3 (39-121)||(4106722-4106804)
chr3 (39-121)||(4110574-4110656)
chr3 (39-121)||(15965671-15965753)
chr3 (39-121)||(15969595-15969677)
chr3 (39-121)||(15973519-15973601)
chr3 (22-124)||(45903938-45904040)
chr3 (22-129)||(29827-29934)
chr3 (22-129)||(8197051-8197158)
chr3 (23-126)||(8488782-8488884)
chr3 (55-129)||(35456328-35456401)
chr3 (23-95)||(18699200-18699272)
chr3 (51-129)||(47540907-47540985)
chr3 (51-129)||(11997395-11997472)
chr3 (63-129)||(12899131-12899197)
chr3 (11-122)||(53358690-53358805)
chr3 (51-111)||(429057-429117)
chr3 (124-173)||(8070838-8070888)
chr3 (23-78)||(14671993-14672048)
chr3 (82-129)||(16023191-16023238)
chr3 (124-173)||(3034805-3034855)
chr3 (124-173)||(3673727-3673777)
chr3 (124-173)||(8884332-8884382)
chr3 (124-173)||(8889078-8889128)
chr3 (51-129)||(16043129-16043207)
chr3 (73-126)||(18011990-18012043)
chr3 (84-129)||(49020114-49020159)
chr3 (71-110)||(3166194-3166233)
chr3 (127-173)||(3693784-3693831)
chr3 (22-61)||(18467836-18467875)
chr3 (22-61)||(32473456-32473495)
chr3 (22-61)||(39775160-39775199)
chr3 (23-61)||(14438132-14438170)
chr3 (51-129)||(16048621-16048699)
chr3 (73-126)||(19340123-19340176)
chr3 (75-124)||(47540522-47540571)
[»] scaffold0182 (2 HSPs)
scaffold0182 (11-124)||(9273-9386)
scaffold0182 (124-173)||(8764-8814)
[»] chr8 (29 HSPs)
chr8 (22-128)||(4237730-4237836)
chr8 (22-128)||(4242469-4242575)
chr8 (22-128)||(31449254-31449360)
chr8 (22-128)||(43302073-43302179)
chr8 (22-128)||(8330752-8330858)
chr8 (22-128)||(37772306-37772412)
chr8 (23-129)||(4582684-4582790)
chr8 (22-128)||(25367375-25367481)
chr8 (23-126)||(21384344-21384447)
chr8 (23-126)||(21387764-21387867)
chr8 (39-121)||(18861966-18862048)
chr8 (22-129)||(22104274-22104381)
chr8 (23-129)||(19393119-19393225)
chr8 (39-121)||(21827335-21827417)
chr8 (22-124)||(34818099-34818201)
chr8 (23-127)||(16066607-16066711)
chr8 (38-126)||(21411638-21411726)
chr8 (38-126)||(21806130-21806218)
chr8 (23-126)||(23915092-23915195)
chr8 (51-129)||(14036083-14036161)
chr8 (32-92)||(25733590-25733650)
chr8 (124-173)||(31448747-31448797)
chr8 (124-175)||(4237222-4237274)
chr8 (124-173)||(4241963-4242013)
chr8 (83-129)||(17153198-17153244)
chr8 (83-129)||(17157440-17157486)
chr8 (56-130)||(42972749-42972823)
chr8 (131-174)||(14036609-14036654)
chr8 (51-116)||(15197266-15197331)
[»] chr2 (28 HSPs)
chr2 (22-128)||(10160109-10160215)
chr2 (33-129)||(25375499-25375595)
chr2 (22-126)||(28855730-28855833)
chr2 (26-128)||(30658780-30658882)
chr2 (39-126)||(1284130-1284217)
chr2 (33-129)||(34070029-34070125)
chr2 (22-129)||(22845001-22845108)
chr2 (23-126)||(23068144-23068247)
chr2 (39-121)||(30344312-30344394)
chr2 (11-129)||(26897215-26897333)
chr2 (22-129)||(24292850-24292957)
chr2 (23-126)||(42248827-42248930)
chr2 (23-129)||(6856797-6856903)
chr2 (23-124)||(377683-377784)
chr2 (24-112)||(7559756-7559844)
chr2 (22-129)||(24286282-24286389)
chr2 (23-129)||(30635393-30635502)
chr2 (32-126)||(9785759-9785851)
chr2 (38-128)||(6297282-6297371)
chr2 (71-129)||(17327708-17327766)
chr2 (55-129)||(17452974-17453053)
chr2 (127-173)||(35602757-35602804)
chr2 (124-173)||(10159601-10159651)
chr2 (22-61)||(18345035-18345074)
chr2 (124-178)||(30659318-30659373)
chr2 (35-97)||(30637112-30637177)
chr2 (51-129)||(30641499-30641577)
chr2 (22-59)||(17968397-17968434)
[»] chr1 (34 HSPs)
chr1 (32-128)||(40232777-40232873)
chr1 (22-128)||(3094688-3094794)
chr1 (22-129)||(17213832-17213939)
chr1 (38-128)||(41097347-41097437)
chr1 (22-129)||(13893915-13894022)
chr1 (23-126)||(39243414-39243517)
chr1 (23-126)||(39246969-39247072)
chr1 (38-126)||(41387366-41387454)
chr1 (22-129)||(1067080-1067187)
chr1 (22-129)||(14804103-14804210)
chr1 (38-129)||(14819587-14819678)
chr1 (22-129)||(22428584-22428690)
chr1 (39-121)||(1924450-1924532)
chr1 (39-121)||(20923464-20923546)
chr1 (32-129)||(21498260-21498357)
chr1 (22-129)||(52100610-52100716)
chr1 (22-129)||(26198957-26199064)
chr1 (38-102)||(16836701-16836765)
chr1 (21-128)||(19725295-19725400)
chr1 (23-110)||(33055636-33055723)
chr1 (23-129)||(2367643-2367749)
chr1 (23-129)||(2384634-2384740)
chr1 (56-129)||(23285227-23285300)
chr1 (77-125)||(8267244-8267292)
chr1 (56-120)||(23254584-23254648)
chr1 (23-97)||(26319593-26319667)
chr1 (32-125)||(19726975-19727067)
chr1 (22-61)||(26927153-26927192)
chr1 (23-61)||(10135950-10135988)
chr1 (124-170)||(27307360-27307406)
chr1 (63-125)||(27308280-27308342)
chr1 (124-173)||(8273059-8273108)
chr1 (127-173)||(14204447-14204495)
chr1 (22-62)||(51040942-51040982)
[»] chr7 (45 HSPs)
chr7 (22-128)||(8076649-8076755)
chr7 (11-128)||(9650349-9650466)
chr7 (22-128)||(27256836-27256942)
chr7 (39-126)||(18426543-18426630)
chr7 (22-128)||(40864752-40864858)
chr7 (38-126)||(20488563-20488651)
chr7 (38-129)||(8954655-8954746)
chr7 (23-126)||(16459772-16459875)
chr7 (39-126)||(45169322-45169409)
chr7 (38-124)||(20485202-20485288)
chr7 (23-126)||(14928027-14928130)
chr7 (23-126)||(15351493-15351596)
chr7 (55-129)||(9008789-9008863)
chr7 (24-129)||(838820-838925)
chr7 (24-129)||(1204000-1204105)
chr7 (22-87)||(47102138-47102203)
chr7 (22-110)||(29727211-29727299)
chr7 (23-126)||(14259606-14259709)
chr7 (23-127)||(36477577-36477674)
chr7 (32-129)||(845996-846093)
chr7 (32-129)||(853373-853470)
chr7 (32-129)||(1211377-1211474)
chr7 (22-125)||(19096853-19096957)
chr7 (23-126)||(32302439-32302542)
chr7 (55-129)||(10532221-10532295)
chr7 (38-128)||(19640914-19641004)
chr7 (55-127)||(10499494-10499566)
chr7 (55-127)||(10504523-10504595)
chr7 (41-125)||(11017473-11017557)
chr7 (55-129)||(13343817-13343891)
chr7 (124-173)||(9649844-9649893)
chr7 (38-126)||(16580844-16580932)
chr7 (57-120)||(2629290-2629353)
chr7 (124-173)||(47102692-47102742)
chr7 (51-126)||(1043847-1043922)
chr7 (51-125)||(11297381-11297455)
chr7 (58-129)||(15566012-15566081)
chr7 (22-61)||(26341831-26341870)
chr7 (127-173)||(43457097-43457143)
chr7 (56-129)||(10488686-10488759)
chr7 (128-173)||(10499011-10499056)
chr7 (128-173)||(10504040-10504085)
chr7 (128-173)||(13343311-13343356)
chr7 (16-61)||(44509829-44509874)
chr7 (124-164)||(23866884-23866924)
[»] chr4 (31 HSPs)
chr4 (11-128)||(13521374-13521491)
chr4 (22-128)||(3997451-3997557)
chr4 (22-128)||(7902500-7902606)
chr4 (23-129)||(15225765-15225871)
chr4 (38-122)||(47575277-47575361)
chr4 (38-128)||(31297884-31297974)
chr4 (22-128)||(34561023-34561129)
chr4 (39-126)||(12488414-12488501)
chr4 (22-129)||(14868456-14868563)
chr4 (22-129)||(14877371-14877478)
chr4 (23-126)||(10713540-10713643)
chr4 (23-126)||(10927310-10927413)
chr4 (38-129)||(14899004-14899095)
chr4 (23-126)||(15011207-15011310)
chr4 (39-121)||(14953451-14953533)
chr4 (39-121)||(25690610-25690692)
chr4 (22-129)||(8660791-8660898)
chr4 (22-129)||(9185072-9185179)
chr4 (22-129)||(9190937-9191044)
chr4 (22-96)||(41817381-41817455)
chr4 (34-129)||(26034799-26034894)
chr4 (34-129)||(39320173-39320267)
chr4 (124-173)||(13520869-13520918)
chr4 (57-125)||(52742616-52742684)
chr4 (23-78)||(18023221-18023276)
chr4 (73-119)||(32545533-32545579)
chr4 (56-129)||(26188056-26188129)
chr4 (51-124)||(55073774-55073847)
chr4 (82-126)||(43477408-43477452)
chr4 (23-61)||(5270856-5270894)
chr4 (127-173)||(39320722-39320768)
[»] scaffold0205 (1 HSPs)
scaffold0205 (23-126)||(30867-30970)
[»] scaffold0034 (1 HSPs)
scaffold0034 (23-126)||(121166-121269)
[»] scaffold0060 (2 HSPs)
scaffold0060 (22-128)||(47362-47468)
scaffold0060 (22-128)||(52306-52412)
[»] scaffold0019 (1 HSPs)
scaffold0019 (23-129)||(30284-30390)
[»] scaffold0009 (1 HSPs)
scaffold0009 (32-129)||(71740-71838)
[»] scaffold0572 (1 HSPs)
scaffold0572 (23-126)||(10367-10470)
[»] scaffold0144 (1 HSPs)
scaffold0144 (32-126)||(7486-7580)
[»] scaffold0061 (1 HSPs)
scaffold0061 (22-128)||(49373-49479)
[»] scaffold0017 (1 HSPs)
scaffold0017 (22-128)||(149155-149261)
[»] scaffold0229 (1 HSPs)
scaffold0229 (39-126)||(10817-10904)
[»] scaffold0157 (1 HSPs)
scaffold0157 (39-126)||(31976-32063)
[»] scaffold0141 (1 HSPs)
scaffold0141 (39-126)||(13403-13490)
[»] scaffold0132 (1 HSPs)
scaffold0132 (22-129)||(24684-24791)
[»] scaffold0124 (1 HSPs)
scaffold0124 (39-126)||(21377-21464)
[»] scaffold0011 (1 HSPs)
scaffold0011 (23-126)||(127003-127106)
[»] scaffold0041 (1 HSPs)
scaffold0041 (22-128)||(35093-35199)
[»] scaffold1910 (1 HSPs)
scaffold1910 (23-127)||(466-570)
[»] scaffold0452 (1 HSPs)
scaffold0452 (38-126)||(12359-12447)
[»] scaffold0431 (1 HSPs)
scaffold0431 (38-126)||(14868-14956)
[»] scaffold0020 (1 HSPs)
scaffold0020 (32-128)||(629-725)
[»] scaffold0044 (2 HSPs)
scaffold0044 (22-129)||(81157-81264)
scaffold0044 (38-129)||(64775-64866)
[»] scaffold0018 (1 HSPs)
scaffold0018 (23-126)||(21907-22010)
[»] scaffold0015 (2 HSPs)
scaffold0015 (22-129)||(193655-193762)
scaffold0015 (23-126)||(187972-188075)
[»] scaffold0415 (1 HSPs)
scaffold0415 (39-121)||(1104-1186)
[»] scaffold0070 (2 HSPs)
scaffold0070 (22-128)||(59025-59131)
scaffold0070 (79-128)||(63284-63333)
[»] scaffold0327 (1 HSPs)
scaffold0327 (32-129)||(19610-19707)
[»] scaffold0357 (1 HSPs)
scaffold0357 (22-129)||(3735-3842)
[»] scaffold0031 (1 HSPs)
scaffold0031 (39-126)||(35402-35489)
[»] scaffold0575 (1 HSPs)
scaffold0575 (23-125)||(5273-5375)
[»] scaffold0628 (2 HSPs)
scaffold0628 (38-126)||(7003-7091)
scaffold0628 (127-173)||(5831-5877)
[»] scaffold0292 (1 HSPs)
scaffold0292 (23-126)||(7767-7870)
[»] scaffold0008 (2 HSPs)
scaffold0008 (55-129)||(256444-256518)
scaffold0008 (127-164)||(257801-257838)
[»] scaffold0004 (1 HSPs)
scaffold0004 (22-127)||(199791-199894)
[»] scaffold0932 (1 HSPs)
scaffold0932 (51-129)||(1027-1105)
[»] scaffold0478 (1 HSPs)
scaffold0478 (51-129)||(8215-8293)
[»] scaffold0096 (1 HSPs)
scaffold0096 (34-86)||(22320-22372)
[»] scaffold0155 (1 HSPs)
scaffold0155 (22-85)||(22274-22337)
[»] scaffold0720 (1 HSPs)
scaffold0720 (51-129)||(5939-6017)
[»] scaffold0045 (1 HSPs)
scaffold0045 (128-173)||(84074-84120)
[»] scaffold0232 (1 HSPs)
scaffold0232 (56-117)||(22583-22644)


Alignment Details
Target: chr6 (Bit Score: 165; Significance: 2e-88; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 24588684 - 24588504
Alignment:
Q  11 ggagcagagagggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaat 110  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24588684 ggagaagagagggaaaaacataggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaat 24588585  T
Q  111 aagtgagaaactttgggaatttgtgtttagtctttttacttaatttccacacatgttccaacacttcccaagtgatctatt 191  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24588584 aagtgagaacctttgggaatttgtgtttagtctttttactcaatttccacacatgttccaacacttcccaagtgatctatt 24588504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 16625016 - 16625122
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  16625016 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 16625115  T
Q  123 ttgggaa 129  Q
    |||||||    
T  16625116 ttgggaa 16625122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 6112238 - 6112148
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||  |||||||||||||||||||||||||    
T  6112238 catcaactgtgaatttcggtgtgttgaatgcactgtgtgagctctctatttatatagaaagttcccaactaataagtgagaaactttggga 6112148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 15704405 - 15704302
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    |||||||| ||||| |||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||    
T  15704405 gaaaaacacaggaagcatcaactgtgaatctcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 15704306  T
Q  123 ttgg 126  Q
    ||||    
T  15704305 ttgg 15704302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 19772491 - 19772403
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||||||    
T  19772491 catcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttgg 19772403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 31477183 - 31477095
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  31477183 catcaactgtgaattttggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 31477095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 22949848 - 22949930
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  22949848 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac 22949930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 22953804 - 22953886
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  22953804 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac 22953886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 23872292 - 23872374
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  23872292 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac 23872374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 23876248 - 23876330
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  23876248 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac 23876330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 16760998 - 16761086
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttata-gagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||| |||| | |||||||||||||||||||||||    
T  16760998 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttataggagataatttacaactaataagtgagaaactttgg 16761086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 27324553 - 27324452
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||||  ||||||| |||||||||||||||| | || | |||||||||||||||||||    
T  27324553 gaaaaacacaggaagcatcaactgtgaatttcggtgtgtagaatgca--gtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 27324456  T
Q  123 ttgg 126  Q
    ||||    
T  27324455 ttgg 27324452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 2077412 - 2077515
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || | || | |||||| ||||||||||||    
T  2077412 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgagagttctctatttatagggatagtttacaactaaaaagtgagaaact 2077511  T
Q  123 ttgg 126  Q
    ||||    
T  2077512 ttgg 2077515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 22806967 - 22807054
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||||||||| | || | ||||||||| |||||||||||||    
T  22806967 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttccctatttatagagatagtttacaactaataaatgagaaactttgg 22807054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 27073585 - 27073691
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||||||||||||||| ||||||| ||   |||||||  |||||||||||||||||||| ||||| |||| |||||||| ||||||||||    
T  27073585 gaaaagcacaggaaacatcaactgtgtatttcggggtccagaatgcatcgtgtgagctctctatttataaagaaatttcacaactaataggtgagaaact 27073684  T
Q  123 ttgggaa 129  Q
    |||||||    
T  27073685 ttgggaa 27073691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 26981195 - 26981301
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| ||||||||||| ||||||| ||   |||||||  |||||||||||||||||||| ||||| |||| |||||||| ||||||||||    
T  26981195 gaaaagcacaggaagcatcaactgtgtatttcggggtccagaatgcatcgtgtgagctctctatttataaagaaatttcacaactaataggtgagaaact 26981294  T
Q  123 ttgggaa 129  Q
    |||||||    
T  26981295 ttgggaa 26981301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 14073754 - 14073839
Alignment:
Q  42 aactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggg 127  Q
    ||||||||||||||| ||  |||||||| ||| ||||||||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  14073754 aactgtgaatttcggggtccggaatgcattgtatgagctctctatttatagagaaatttcacaactaatagatgagaaactttggg 14073839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 15991157 - 15991086
Alignment:
Q  55 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||||||||||||||| |  | | ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  15991157 ggtgtgtggaatgcactatacgtgttctctatttgtagagaaaattcacaactaataagtgagaaactttgg 15991086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 2862938 - 2862860
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||||||| || || || ||| | |||||||||||    
T  2862938 tttcggtgtatggaatgaactatgtgagctctctatttatagagaaaattcacaaatagtatgtgtgcaactttgggaa 2862860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 18387531 - 18387636
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| |||||||||||| ||| || ||    |||||| ||||||||||||||||||||| ||||| |||| || ||||| |||||||||    
T  18387531 ggaaaagcacaggaatcatcaactgtgatttttggggtccaaaatgcattgtgtgagctctctatttatacagaaacttcacaattaataggtgagaaac 18387630  T
Q  122 tttggg 127  Q
    ||||||    
T  18387631 tttggg 18387636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 15640938 - 15641012
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttg 125  Q
    ||||||||||| ||||| | | ||||||||| ||||||||||||| |||||| |||||||| |||| ||||||||    
T  15640938 tttcggtgtgttgaatgaattatgtgagctcactatttatagagagaattcacaactaatacgtgataaactttg 15641012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 28963786 - 28963737
Alignment:
Q  127 gaatttgtgtttagtctttttacttaatttccacacatgttccaacactt 176  Q
    |||||||||||| ||||||| ||| |||||||||||||||||||||||||    
T  28963786 gaatttgtgtttggtcttttaactcaatttccacacatgttccaacactt 28963737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 2759820 - 2759769
Alignment:
Q  73 tgtgagctctctatttatagagaaaattcaaaactaataagtgagaaacttt 124  Q
    |||||||||||| |||| |||||||||||| ||||||||||| |||||||||    
T  2759820 tgtgagctctctgtttacagagaaaattcacaactaataagtaagaaacttt 2759769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 15509448 - 15509493
Alignment:
Q  128 aatttgtgtttagtctttttacttaatttccacacatgttccaaca 173  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||    
T  15509448 aatttgtgtttagtcttttaacttaattttcacatatgttccaaca 15509493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 14322845 - 14322801
Alignment:
Q  82 tctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    |||||||||||||| |||| | |||||||||||||||||||||||    
T  14322845 tctatttatagagataatttacaactaataagtgagaaactttgg 14322801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 2882241 - 2882190
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattca 102  Q
    ||||||||| ||||||| ||| ||||||||||  ||||||||||||||||||    
T  2882241 tttcggtgtatggaatgaactatgtgagctctgaatttatagagaaaattca 2882190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 17964030 - 17963991
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 61  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  17964030 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 17963991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 29157116 - 29157067
Alignment:
Q  124 tgggaatttgtgtttagtctttttacttaatttccacacatgttccaaca 173  Q
    |||||||||||||| |||||||| |||||||||| |  ||||||||||||    
T  29157116 tgggaatttgtgttcagtcttttaacttaatttctatgcatgttccaaca 29157067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 15645330 - 15645386
Alignment:
Q  55 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaata 111  Q
    ||||||| ||||| | | ||||||||||||||||||| |||||||||  ||||||||    
T  15645330 ggtgtgtagaatggattatgtgagctctctatttatatagaaaattcgcaactaata 15645386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 557295 - 557401
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  557295 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 557394  T
Q  122 tttggga 128  Q
    |||||||    
T  557395 tttggga 557401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 36937006 - 36936900
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  36937006 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 36936907  T
Q  122 tttggga 128  Q
    |||||||    
T  36936906 tttggga 36936900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 41997264 - 41997369
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  41997264 gaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaact 41997363  T
Q  123 ttggga 128  Q
    ||||||    
T  41997364 ttggga 41997369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 42002033 - 42002138
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  42002033 gaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaact 42002132  T
Q  123 ttggga 128  Q
    ||||||    
T  42002133 ttggga 42002138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 562067 - 562173
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  562067 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtaagaaac 562166  T
Q  122 tttggga 128  Q
    |||||||    
T  562167 tttggga 562173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 36941760 - 36941654
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  36941760 ggaaaaacacaggaagcatcaactgtgaatttcggtgtatggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 36941661  T
Q  122 tttggga 128  Q
    |||||||    
T  36941660 tttggga 36941654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 13300969 - 13300879
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 128  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  13300969 catcaactgtgaatttcggtgtgtggaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 13300879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 36949394 - 36949491
Alignment:
Q  32 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  36949394 aggaaacatcaattgtgattttcggtgtgttgaatgcactgtgtgagctctctatttatagaaaaaattcataactaataagtgagaaactttgggaa 36949491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 31732136 - 31732242
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| |||||||||||||||||||||| || || ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  31732136 ggaaaagcacaggaagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 31732235  T
Q  122 tttggga 128  Q
    |||||||    
T  31732236 tttggga 31732242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 32461039 - 32460937
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  32461039 ggaaaaacacaggaagcatcaactgtgaatttcggtgtatggaatgcattgtgtgagctctctatttatagataaagttcacaactaataagtgagaaac 32460940  T
Q  122 ttt 124  Q
    |||    
T  32460939 ttt 32460937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 10754050 - 10754153
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  10754050 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 10754149  T
Q  123 ttgg 126  Q
    ||||    
T  10754150 ttgg 10754153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 21323461 - 21323367
Alignment:
Q  32 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||| |||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  21323461 aggaagcatcaactgtgaatttcggtgtatggaaaacactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgg 21323367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 23977066 - 23976976
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 128  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  23977066 catcaactgtgaatttcagtgtatggaatgcactgtgtgagctctctatttatagagaaagttcactactaataagtgagaaactttggga 23976976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 21826822 - 21826929
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| |||| | |||||| |||||||||    
T  21826822 ggaaaagcacaggaatcatcaactgtgaatttcggggtgtagaatgcattgtgtgagctctctatttatagagaaacttcacagctaataggtgagaaac 21826921  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  21826922 tttgggaa 21826929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 3666536 - 3666615
Alignment:
Q  46 gtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttg 125  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3666536 gtgaatttcggtgtgtagaatgccctgcgtgagctctctatttatagagaaaattcacaactaataagtgagaaactttg 3666615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 12044630 - 12044519
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactg-----tgtgagctctctatttatagagaaaattcaaaactaataagtga 116  Q
    ||||||||| ||||| |||||||| ||||||||||||||||||||||||||     |||||||||||| ||| ||||||||||||| |||||||||||||    
T  12044630 ggaaaaacacaggaagcatcaactttgaatttcggtgtgtggaatgcactgctgtgtgtgagctctctttttctagagaaaattcacaactaataagtga 12044531  T
Q  117 gaaactttggga 128  Q
     |||||||||||    
T  12044530 aaaactttggga 12044519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 26869809 - 26869702
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||| |||| | |||||| |||||||||    
T  26869809 ggaaaagcacaggaagcatcaactgtgaatttcggtgtacagaatgcattgtgtgagctctctatttatagagaaacttcacagctaataggtgagaaac 26869710  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  26869709 tttgggaa 26869702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 8770842 - 8770932
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataa 112  Q
    ||||||||| ||||| ||||||||||||||||| ||||   ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  8770842 ggaaaaacacaggaagcatcaactgtgaatttcagtgtccagaatgcattgtgtgagctctctatttatagagaaaattcacaactaataa 8770932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 15395294 - 15395233
Alignment:
Q  63 gaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaacttt 124  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  15395294 gaatgcaccgagtgagctctctatttatagagaaaattcacaactaataagtgagtaacttt 15395233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 3667038 - 3667083
Alignment:
Q  128 aatttgtgtttagtctttttacttaatttccacacatgttccaaca 173  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  3667038 aatttgtgtttagtctttttactcaatttccacacatgttccaaca 3667083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 24435668 - 24435571
Alignment:
Q  32 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||| |||| |||||| | |||||||||  |||||||||||| |||||||||||||||||||||| |||   |||||||||||| | ||||| ||||    
T  24435668 aggaatcatcgactgtggaattcggtgtgaagaatgcactgtgagagctctctatttatagagaaagttctctactaataagtgaaagactttaggaa 24435571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 12044064 - 12044013
Alignment:
Q  124 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaacac 174  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  12044064 tgggaatttgtgtttagtctttttaactcaatttccacacatgttccaacac 12044013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 557857 - 557907
Alignment:
Q  124 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  557857 tgggaatttgtgtttagtctttttaactcaatttccacacatgttccaaca 557907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 562627 - 562677
Alignment:
Q  124 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  562627 tgggaatttgtgtttagtctttttaactcaatttccacacatgttccaaca 562677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 41099170 - 41099236
Alignment:
Q  63 gaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||| ||||||||| ||||||||||||||||| |||  |||||||| |||| ||||||||||||    
T  41099170 gaatgcattgtgtgagccctctatttatagagaaacttcccaactaataggtgataaactttgggaa 41099236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 42002598 - 42002645
Alignment:
Q  127 gaatttgtgtttagtcttttta-cttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||    
T  42002598 gaatttgtgtttagtctttttaactcaatttccacacatgttccaaca 42002645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 36936443 - 36936393
Alignment:
Q  124 tgggaatttgtgtttagtcttttta-cttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  36936443 tgggaatttgtgtttagtctgtttaactcaatttccacacatgttccaaca 36936393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 36941197 - 36941147
Alignment:
Q  124 tgggaatttgtgtttagtcttttta-cttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  36941197 tgggaatttgtgtttagtctgtttaactcaatttccacacatgttccaaca 36941147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 41997804 - 41997854
Alignment:
Q  124 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  41997804 tgggaatttgtgtttagtctttttaactcaattttcacacatgttccaaca 41997854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 26667902 - 26667941
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 61  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  26667902 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 26667941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 26939499 - 26939538
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 61  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  26939499 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 26939538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 29167444 - 29167405
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 61  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  29167444 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 29167405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 36424262 - 36424301
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 61  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  36424262 ggaaaaacacagaaaacatcaactgtgaatttcggtgtgt 36424301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 32460477 - 32460427
Alignment:
Q  124 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 173  Q
    |||||||||||| ||||||||||| ||| |||||| |||||||||||||||    
T  32460477 tgggaatttgtgattagtctttttaactcaatttcaacacatgttccaaca 32460427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 1429624 - 1429584
Alignment:
Q  58 gtgtggaatgcactgtgtgagctctctatttatagagaaaa 98  Q
    |||| ||||||||| ||||||||||||||||||||| ||||    
T  1429624 gtgtagaatgcactatgtgagctctctatttatagaaaaaa 1429584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 6154915 - 6154867
Alignment:
Q  11 ggagcagagagggaaaaacataggaaacatcaactgtgaatttcggtgt 59  Q
    |||| ||||| | ||||||| ||||| ||||||||||||||||||||||    
T  6154915 ggagaagagaagaaaaaacacaggaagcatcaactgtgaatttcggtgt 6154867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 3034242 - 3034348
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  3034242 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 3034341  T
Q  122 tttggga 128  Q
    |||||||    
T  3034342 tttggga 3034348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 3693217 - 3693323
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  3693217 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 3693316  T
Q  122 tttggga 128  Q
    |||||||    
T  3693317 tttggga 3693323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 8888529 - 8888635
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  8888529 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 8888628  T
Q  122 tttggga 128  Q
    |||||||    
T  8888629 tttggga 8888635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 3673185 - 3673291
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  3673185 ggaaaaacacaggaagcatcaactgtgaatttcagtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 3673284  T
Q  122 tttggga 128  Q
    |||||||    
T  3673285 tttggga 3673291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 8070278 - 8070384
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||| | ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  8070278 ggaaaaatacaggaagcatcaactgtgaatttcggtgtctggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 8070377  T
Q  122 tttggga 128  Q
    |||||||    
T  8070378 tttggga 8070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 8883769 - 8883875
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||||||||||||||    
T  8883769 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtaagctctttatttatagagaaagttcacaactaataagtgagaaac 8883868  T
Q  122 tttggga 128  Q
    |||||||    
T  8883869 tttggga 8883875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 10585685 - 10585579
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| |||||||||||||||| ||||| || || ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  10585685 ggaaaaacacaggaagcatcaactgtgaattttggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 10585586  T
Q  122 tttggga 128  Q
    |||||||    
T  10585585 tttggga 10585579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 9707085 - 9706982
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  9707085 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 9706986  T
Q  123 ttgg 126  Q
    ||||    
T  9706985 ttgg 9706982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 16749414 - 16749311
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  16749414 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 16749315  T
Q  123 ttgg 126  Q
    ||||    
T  16749314 ttgg 16749311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 19776485 - 19776588
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  19776485 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 19776584  T
Q  123 ttgg 126  Q
    ||||    
T  19776585 ttgg 19776588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 6595888 - 6595781
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| |||||||| ||||||| | |||||  |||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  6595888 ggaaaaacacaggaagcatcaactatgaattttgatgtgtaaaatgcactctgtgagctctctatttatagagaaaattcacaactaataagtgaaaaac 6595789  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  6595788 tttgggaa 6595781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 18350269 - 18350163
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    |||||||| ||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||||| |||  |||||||| ||||||||||    
T  18350269 gaaaaacacaggaagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcgcaactaataggtgagaaact 18350170  T
Q  123 ttgggaa 129  Q
    |||||||    
T  18350169 ttgggaa 18350163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 22758659 - 22758571
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | || | ||||||||||||||||| |||||    
T  22758659 catcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaattttgg 22758571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 51922944 - 51923040
Alignment:
Q  33 ggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||| ||||||||||||||||||||||   ||||||| ||||||||| ||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  51922944 ggaatcatcaactgtgaatttcggtgtccagaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaa 51923040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 8223534 - 8223641
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||| ||||||||| ||||||||||||||||| |||| |||||||| |||||||||    
T  8223534 ggaaaagcacaggaagcatcaactgtgaatttcggggtccagaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaac 8223633  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  8223634 tttgggaa 8223641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 14425338 - 14425231
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||||||   ||||||| |||||||||||||||||| |||||||| |||| | |||||| |||||||||    
T  14425338 ggaaaagcacaggaatcatcaactgtgaatttcggtgtacagaatgcattgtgtgagctctctatttctagagaaacttcacagctaataggtgagaaac 14425239  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  14425238 tttgggaa 14425231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 37439038 - 37438951
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    |||||||||||||||||| |||| ||||| |||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  37439038 atcaactgtgaatttcggcgtgtagaatgaactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 37438951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 4106804 - 4106722
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| |||| | ||||||||||||||||||    
T  4106804 atcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaac 4106722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 4110656 - 4110574
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| |||| | ||||||||||||||||||    
T  4110656 atcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaac 4110574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 15965671 - 15965753
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| |||| | ||||||||||||||||||    
T  15965671 atcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaac 15965753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 15969595 - 15969677
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| |||| | ||||||||||||||||||    
T  15969595 atcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaac 15969677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 15973519 - 15973601
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| |||| | ||||||||||||||||||    
T  15973519 atcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaac 15973601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 45904040 - 45903938
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||||||| |||||||||||||||||| | ||| ||||  ||||||||||||||||||||||||| ||| ||| |||||||||||||||    
T  45904040 ggaaaagcacaggaaacattaactgtgaatttcggtgtattgaaagcacattgtgagctctctatttatagagaaagttccaaagtaataagtgagaaac 45903941  T
Q  122 ttt 124  Q
    |||    
T  45903940 ttt 45903938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 29827 - 29934
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||| ||||||||||||||||   ||||||| ||||||||| ||||||||||||| ||| |||| |||||||| |||||||||    
T  29827 ggaaaagcacaggaatcatcatctgtgaatttcggtgtcctgaatgcattgtgtgagccctctatttatagaaaaatttcacaactaataggtgagaaac 29926  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  29927 tttgggaa 29934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 8197051 - 8197158
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||| ||    |||||| ||||||||| ||||||||||||||||| |||| |||||||| |||||||||    
T  8197051 ggaaaagcacaggaagcatcaactgtgaatttcggggtccataatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaac 8197150  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  8197151 tttgggaa 8197158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 8488884 - 8488782
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||| | ||||||||||| ||||| |||||||||| |||||||||||||||| | || | |||||||||||||||||||    
T  8488884 gaaaagcacaggaagcatcaactgtaactttcggtgtgtagaatg-actgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 8488786  T
Q  123 ttgg 126  Q
    ||||    
T  8488785 ttgg 8488782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 35456401 - 35456328
Alignment:
Q  55 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  35456401 ggtgtgtggaatgcactatgtgaattctctatttatagagaaaattcacaactaataag-gagaaactttgggaa 35456328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 18699272 - 18699200
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagaga 95  Q
    ||||| || ||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  18699272 gaaaagcacaggaagcatcaagtgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagaga 18699200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 47540985 - 47540907
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||| ||||| ||||| ||| ||||| || ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  47540985 tttcgatgtgtagaatgaactatgtgaactttctatttatagagaaaattcacaactaatatgtgagaaactttgggaa 47540907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 11997472 - 11997395
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||| |||||| ||||| |||  ||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  11997472 tttcagtgtgtagaatgtactacgtgagctctctatttatagagaaaattcacaactaat-attgagaaactttgggaa 11997395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 12899197 - 12899131
Alignment:
Q  63 gaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||| ||||| |||  ||||||||||||||||||| | ||||||||||||||||||||||||    
T  12899197 gaatgcactatgtgatctcattatttatagagaaaattcacagctaataagtgagaaactttgggaa 12899131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 53358690 - 53358805
Alignment:
Q  11 ggagcagagagggaaaaacataggaaacatcaactgtga--atttcggtgtgtggaatgcactgtg--tgagctctctatttatagagaaaattcaaaac 106  Q
    |||| ||||||| ||||||| | ||| |||||||| |||  ||| |||||||| ||||||| ||||  ||||||||||||||||| ||||| |||| |||    
T  53358690 ggagaagagaggaaaaaacacatgaagcatcaactatgacaattacggtgtgtagaatgcattgtgtgtgagctctctatttataaagaaagttcacaac 53358789  T
Q  107 taataagtgagaaact 122  Q
    |||||||||| |||||    
T  53358790 taataagtgaaaaact 53358805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 429057 - 429117
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaata 111  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||||| || |||||    
T  429057 tttcggtgtgtggaatgaactttgtgagctctttatttatagagaaaattcacaagtaata 429117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 8070838 - 8070888
Alignment:
Q  124 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  8070838 tgggaatttgtgtttagtctttttaactcaatttccacacatgttccaaca 8070888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 14671993 - 14672048
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgag 78  Q
    ||||| || ||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  14671993 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcagtgtgtgag 14672048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 16023191 - 16023238
Alignment:
Q  82 tctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  16023191 tctatttatagagaaaattcacaactaatatgtgacaaactttgggaa 16023238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 3034805 - 3034855
Alignment:
Q  124 tgggaatttgtgtttagtcttttta-cttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  3034805 tgggaatttgtgtttagtctgtttaactcaatttccacacatgttccaaca 3034855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 3673727 - 3673777
Alignment:
Q  124 tgggaatttgtgtttagtcttttta-cttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  3673727 tgggaatttgtgtttagtctgtttaactcaatttccacacatgttccaaca 3673777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 8884332 - 8884382
Alignment:
Q  124 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  8884332 tgggaatttgtgtttagtctttttaactcagtttccacacatgttccaaca 8884382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 8889078 - 8889128
Alignment:
Q  124 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  8889078 tgggaatttgtgtttagtctttttaactcagtttccacacatgttccaaca 8889128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 16043129 - 16043207
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||||  ||||||| | || |||| ||||||||||||||||| |||   |||||||||||| ||||||||||||    
T  16043129 tttcggtgtgaagaatgcattttgagagccctctatttatagagaaagttctctactaataagtgaaaaactttgggaa 16043207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 18011990 - 18012043
Alignment:
Q  73 tgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    |||||||| | ||||||||||||||||||| |||||||| |||| |||||||||    
T  18011990 tgtgagctatttatttatagagaaaattcacaactaatatgtgataaactttgg 18012043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 49020114 - 49020159
Alignment:
Q  84 tatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||    
T  49020114 tatttatagagaaaattcacaactaataagtgataaattttgggaa 49020159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 110
Target Start/End: Complemental strand, 3166233 - 3166194
Alignment:
Q  71 tgtgtgagctctctatttatagagaaaattcaaaactaat 110  Q
    ||||||||||||||||||||||| |||||||| |||||||    
T  3166233 tgtgtgagctctctatttatagaaaaaattcataactaat 3166194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 3693784 - 3693831
Alignment:
Q  127 gaatttgtgtttagtcttttta-cttaatttccacacatgttccaaca 173  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||    
T  3693784 gaatttgtgtttagtctgtttaactcaatttccacacatgttccaaca 3693831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 18467836 - 18467875
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 61  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  18467836 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 18467875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 32473495 - 32473456
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 61  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  32473495 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 32473456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 39775199 - 39775160
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 61  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  39775199 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 39775160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 14438170 - 14438132
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgt 61  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  14438170 gaaaaacacaggaagcatcaactgtgaatttcggtgtgt 14438132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 16048621 - 16048699
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||||  |||| || | || |||| ||||||||||||||||| |||   |||||||||||| ||||||||||||    
T  16048621 tttcggtgtgaagaatacattttgagagccctctatttatagagaaagttctctactaataagtgaaaaactttgggaa 16048699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 19340123 - 19340176
Alignment:
Q  73 tgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    |||||||| |||||||||| |||||||||| || ||||| || |||||||||||    
T  19340123 tgtgagctatctatttataaagaaaattcacaaataatatgttagaaactttgg 19340176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 47540571 - 47540522
Alignment:
Q  75 tgagctctctatttatagagaaaattcaaaactaataagtgagaaacttt 124  Q
    ||||| || ||||| ||||||||||||| |||||||| ||||||||||||    
T  47540571 tgagccctttatttttagagaaaattcacaactaatatgtgagaaacttt 47540522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 9386 - 9273
Alignment:
Q  11 ggagcagagagggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaat 110  Q
    |||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  9386 ggagaagagaggaaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaat 9287  T
Q  111 aagtgagaaacttt 124  Q
    ||||||||||||||    
T  9286 aagtgagaaacttt 9273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 8814 - 8764
Alignment:
Q  124 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  8814 tgggaatttgtgtttagtctttttaactcaatttccacacatgttccaaca 8764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 7e-42; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 4237836 - 4237730
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  4237836 ggaaaaacacaggaagcatcaactgtgaatttcggtgcgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 4237737  T
Q  122 tttggga 128  Q
    |||||||    
T  4237736 tttggga 4237730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 4242575 - 4242469
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  4242575 ggaaaaacacaggaagcatcaactgtgaatttcggtgcgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 4242476  T
Q  122 tttggga 128  Q
    |||||||    
T  4242475 tttggga 4242469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 31449360 - 31449254
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  31449360 ggaaaaacacagaaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 31449261  T
Q  122 tttggga 128  Q
    |||||||    
T  31449260 tttggga 31449254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 43302179 - 43302073
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||    
T  43302179 ggaaaaacataggaagcatcaactgtgaatttcgatgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaagtaataagtgagaaac 43302080  T
Q  122 tttggga 128  Q
    |||||||    
T  43302079 tttggga 43302073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 8330858 - 8330752
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  8330858 ggaaaagcacaggaagcatcaactgtgaatttcggtgtatggaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 8330759  T
Q  122 tttggga 128  Q
    |||||||    
T  8330758 tttggga 8330752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 37772306 - 37772412
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| |||||||||||||||||||||| || || ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  37772306 ggaaaaacacaggaagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 37772405  T
Q  122 tttggga 128  Q
    |||||||    
T  37772406 tttggga 37772412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 4582790 - 4582684
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    |||||||| ||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||||| |||| |||||||| ||||||||||    
T  4582790 gaaaaacacaggaagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaact 4582691  T
Q  123 ttgggaa 129  Q
    |||||||    
T  4582690 ttgggaa 4582684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 25367481 - 25367375
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| | ||| |||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| |||| ||||| ||||||||||||    
T  25367481 ggaaaaacacatgaagcatcaattgtgaatttcggtgtatggaaagcactgtgtgaactctctatttatagagaaagttcacaactagtaagtgagaaac 25367382  T
Q  122 tttggga 128  Q
    |||||||    
T  25367381 tttggga 25367375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 21384344 - 21384447
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||    
T  21384344 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtataatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 21384443  T
Q  123 ttgg 126  Q
    ||||    
T  21384444 ttgg 21384447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 21387764 - 21387867
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||    
T  21387764 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtataatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 21387863  T
Q  123 ttgg 126  Q
    ||||    
T  21387864 ttgg 21387867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 18862048 - 18861966
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  18862048 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 18861966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 22104274 - 22104381
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| |||||| |||||||||||||||   ||||||| ||||||||||||||||||||||||||| |||| | |||||| |||||||||    
T  22104274 ggaaaagcacaggaatcatcaaatgtgaatttcggtgtacagaatgcattgtgtgagctctctatttatagagaaacttcacagctaataggtgagaaac 22104373  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  22104374 tttgggaa 22104381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 19393225 - 19393119
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| ||||||||||||||||||| ||    |||||| |||||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  19393225 gaaaagcacaggaagcatcaactgtgaatttcggggtccataatgcattgtgtgagatctctatttatagagaaatttcacaactaataagtgagaaact 19393126  T
Q  123 ttgggaa 129  Q
    |||||||    
T  19393125 ttgggaa 19393119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 21827417 - 21827335
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||| | ||||||||||||||||||    
T  21827417 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatcatttacaactaataagtgagaaac 21827335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 34818201 - 34818099
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||||||   ||| ||||||||||| ||||||||||||||||||| |||| ||||||||| ||||||||    
T  34818201 ggaaaagcacaggaagcatcaactgtgaatttcggtgtaccgaaagcactgtgtgaactctctatttatagagaaagttcacaactaataactgagaaac 34818102  T
Q  122 ttt 124  Q
    |||    
T  34818101 ttt 34818099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 16066711 - 16066607
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    |||||| | ||||| ||||||||||||||||||||||    | |||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  16066711 gaaaaatacaggaagcatcaactgtgaatttcggtgtccatagtgcattgtgtgagctctctatttatagagaaacttcacaactaataggtgagaaact 16066612  T
Q  123 ttggg 127  Q
    |||||    
T  16066611 ttggg 16066607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 21411638 - 21411726
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    |||||||||||||||||||||||| ||||||||| || ||| |||||||||||||||| | || | |||||||||||||||||||||||    
T  21411638 catcaactgtgaatttcggtgtgtagaatgcactatgcgagttctctatttatagagatagtttacaactaataagtgagaaactttgg 21411726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 21806130 - 21806218
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    |||||||||||||||||||||||| ||||||||| || ||| |||||||||||||||| | || | |||||||||||||||||||||||    
T  21806130 catcaactgtgaatttcggtgtgtagaatgcactatgcgagttctctatttatagagatagtttacaactaataagtgagaaactttgg 21806218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 23915092 - 23915195
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || | || | ||||||||| |||||||||    
T  23915092 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgagagttctctatttatagggatagtttacaactaataaatgagaaact 23915191  T
Q  123 ttgg 126  Q
    ||||    
T  23915192 ttgg 23915195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 14036083 - 14036161
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||||||||||| | | ||||||||||||||||||||| ||||||||  | ||||| |||||||||||||||||    
T  14036083 tttcggtgtgtggaatgaattttgtgagctctctatttatagaaaaaattcacgattaatatgtgagaaactttgggaa 14036161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 25733650 - 25733590
Alignment:
Q  32 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatag 92  Q
    ||||| |||||||||||||||||||||||| ||||||||| |||||| |||||||||||||    
T  25733650 aggaagcatcaactgtgaatttcggtgtgtagaatgcactttgtgagttctctatttatag 25733590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 31448797 - 31448747
Alignment:
Q  124 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  31448797 tgggaatttgtgtttagtctttttaactcaatttccacacatgttccaaca 31448747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 4237274 - 4237222
Alignment:
Q  124 tgggaatttgtgtttagtcttttta-cttaatttccacacatgttccaacact 175  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  4237274 tgggaatttgtgtttagtctgtttaactcaatttccacacatgttccaacact 4237222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 4242013 - 4241963
Alignment:
Q  124 tgggaatttgtgtttagtcttttta-cttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  4242013 tgggaatttgtgtttagtctgtttaactcaatttccacacatgttccaaca 4241963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 17153198 - 17153244
Alignment:
Q  83 ctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||    
T  17153198 ctatttatagagaaaaatcacaactaatatgtgagaaactttgggaa 17153244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 17157486 - 17157440
Alignment:
Q  83 ctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||    
T  17157486 ctatttatagagaaaaatcacaactaatatgtgagaaactttgggaa 17157440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 42972749 - 42972823
Alignment:
Q  56 gtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaat 130  Q
    |||||| ||||||||| |||||  | |||||||||||||||||||    ||||| ||||||||||||||||||||    
T  42972749 gtgtgtagaatgcactatgtgaaatatctatttatagagaaaatttcccactaaaaagtgagaaactttgggaat 42972823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 14036609 - 14036654
Alignment:
Q  131 ttgtgtttagtctttttactt--aatttccacacatgttccaacac 174  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||    
T  14036609 ttgtgtttagtcttttaacttctaatttccacacatgttccaacac 14036654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 15197266 - 15197331
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtga 116  Q
    |||||||| |||||||| ||| | ||| |||||||||||||| | ||||||| |||||||| ||||    
T  15197266 tttcggtgcgtggaatgaactatctgaactctctatttatagtgtaaattcacaactaatatgtga 15197331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 7e-42; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 10160215 - 10160109
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  10160215 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttgtagagaaagttcacaactaataagtgagaaac 10160116  T
Q  122 tttggga 128  Q
    |||||||    
T  10160115 tttggga 10160109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 25375499 - 25375595
Alignment:
Q  33 ggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||| ||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25375499 ggaatcatcaactgtgaatttcagtgtgtagaatgcactgtgtaagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaa 25375595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 28855730 - 28855833
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||| ||||||||| ||||||||    
T  28855730 ggaaaaacataggaatcatcaactgtgaatttcggtgtgtcgaatgcactttgtgagctctctatttatag-ggaaattcacaactaataaatgagaaac 28855828  T
Q  122 tttgg 126  Q
    |||||    
T  28855829 tttgg 28855833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 30658780 - 30658882
Alignment:
Q  26 aaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttg 125  Q
    ||||||| ||| ||||||||||||||||  || |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  30658780 aaacatatgaagcatcaactgtgaatttgtgtatgtggaatgcactgtgtgagctctctatttatggagaaagttcacaactaataagtgagaaactttg 30658879  T
Q  126 gga 128  Q
    |||    
T  30658880 gga 30658882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 1284130 - 1284217
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  1284130 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 1284217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 34070029 - 34070125
Alignment:
Q  33 ggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||| ||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  34070029 ggaagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaa 34070125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 22845001 - 22845108
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| | ||| |||||| ||||||||||| | |||  | |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22845001 ggaaaaacacaagaagcatcaattgtgaatttcgttctgtacattgcactatgtgagctctctatttatagagaaaattcacaactaataagtgagaaac 22845100  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  22845101 tttgggaa 22845108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 23068247 - 23068144
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | || | |||||||||| ||||||||    
T  23068247 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagcgagaaact 23068148  T
Q  123 ttgg 126  Q
    ||||    
T  23068147 ttgg 23068144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 30344394 - 30344312
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  30344394 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 30344312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 26897215 - 26897333
Alignment:
Q  11 ggagcagagagggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaat 110  Q
    |||| ||||||  |||| || ||||| ||||||||||||||||||| ||   ||||||| ||||||||| ||||||||||||||||| |||| |||||||    
T  26897215 ggagaagagagcaaaaagcacaggaagcatcaactgtgaatttcggagtccagaatgcattgtgtgagccctctatttatagagaaacttcacaactaat 26897314  T
Q  111 aagtgagaaactttgggaa 129  Q
    | |||||||||||||||||    
T  26897315 aggtgagaaactttgggaa 26897333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 24292957 - 24292850
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||| ||||||||| ||||||||||||||||| |||| |||||| | |||||||||    
T  24292957 ggaaaagcacaggaagcatcaactgtgaatttcggggtcctgaatgcattgtgtgagccctctatttatagagaaacttcacaactaaaaggtgagaaac 24292858  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  24292857 tttgggaa 24292850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 42248827 - 42248930
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||| |||| |||||||||||| ||||||| ||||||||| ||||||||||||||||| |||  |||||||| ||||||||||    
T  42248827 gaaaagcacaggaagcatcaattgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttccgaactaataggtgagaaact 42248926  T
Q  123 ttgg 126  Q
    ||||    
T  42248927 ttgg 42248930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 6856797 - 6856903
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| ||||||||||||||||||||     ||||| | ||||||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  6856797 gaaaagcacaggaagcatcaactgtgaatttcggtccccagaatgtattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaact 6856896  T
Q  123 ttgggaa 129  Q
    |||||||    
T  6856897 ttgggaa 6856903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 377784 - 377683
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    |||||||| ||||| ||||||||||||||||||||||  | |||||| | ||||||||||||||||||||| ||| |||| |||||| | ||||||||||    
T  377784 gaaaaacacaggaagcatcaactgtgaatttcggtgtccgtaatgcattatgtgagctctctatttatagaaaaacttcacaactaaaaggtgagaaact 377685  T
Q  123 tt 124  Q
    ||    
T  377684 tt 377683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 7559844 - 7559756
Alignment:
Q  24 aaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataa 112  Q
    ||||||| ||||| ||||||||||||||||  ||||   ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  7559844 aaaaacacaggaagcatcaactgtgaatttaagtgtccagaatgcattgtgtgagctctctatttatagagaaaattcacaactaataa 7559756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 24286389 - 24286282
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||| ||||||||| ||||||||||||||||| |||| |||||| | ||||||| |    
T  24286389 ggaaaagcacaggaagcatcaactgtgaatttcggggtcctgaatgcattgtgtgagccctctatttatagagaaacttcacaactaaaaggtgagaagc 24286290  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  24286289 tttgggaa 24286282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 30635393 - 30635502
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaattt-cggtgtgtggaatgcactgtgtgagctctc--tatttatagagaaaattcaaaactaataagtgagaa 119  Q
    ||||| || ||||| |||||||||||||||| ||||||||  |||||||| ||||||||||   |||||||| |||||||||| ||||||||||||||||    
T  30635393 gaaaagcacaggaagcatcaactgtgaattttcggtgtgtaaaatgcactttgtgagctctaaatatttataaagaaaattcacaactaataagtgagaa 30635492  T
Q  120 actttgggaa 129  Q
    |||| |||||    
T  30635493 acttggggaa 30635502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 9785759 - 9785851
Alignment:
Q  32 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||| ||||||||||||||||||||||||  |||||||  |||||| ||||||||||||| || | || | |||||||||||||||||||||||    
T  9785759 aggaagcatcaactgtgaatttcggtgtgtaaaatgcac--tgtgagttctctatttatagggatagtttacaactaataagtgagaaactttgg 9785851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 6297371 - 6297282
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 128  Q
    ||||||||||||||||| |||| | ||| | |||||||||||||||||||| |||||||| || | ||||||||||||| |||||||||||    
T  6297371 catcaactgtgaatttctgtgtatagaaagaactgtgtgagctctctattt-tagagaaagttgacaactaataagtgataaactttggga 6297282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 17327708 - 17327766
Alignment:
Q  71 tgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||    
T  17327708 tgtgtgagctctctatttatagagaaaatttacaactaataagtgagaaattttgggaa 17327766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 17453053 - 17452974
Alignment:
Q  55 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaatt-----caaaactaataagtgagaaactttgggaa 129  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||     | || ||||||||||||||||||||||||    
T  17453053 ggtgtgtggaatgtactatgtgagatctctatttatagagaaaatttacaactaatctaataagtgagaaactttgggaa 17452974  T

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Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 35602757 - 35602804
Alignment:
Q  127 gaatttgtgtttagtcttttta-cttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||    
T  35602757 gaatttgtgtttagtctttttaactcaatttccacacatgttccaaca 35602804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 10159651 - 10159601
Alignment:
Q  124 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  10159651 tgggaatttgtgtttagtctttttaactcaatttccacagatgttccaaca 10159601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 18345035 - 18345074
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 61  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  18345035 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 18345074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 30659318 - 30659373
Alignment:
Q  124 tgggaatttgtgtttagtcttttta-cttaatttccacacatgttccaacacttcc 178  Q
    ||||| ||| ||||||||||||||| || |||||||||||||||||||||| ||||    
T  30659318 tgggagtttttgtttagtctttttaactcaatttccacacatgttccaacaattcc 30659373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 30637112 - 30637177
Alignment:
Q  35 aaacatcaactgtgaattt-cggtgtgtggaatgcactgtgtgagctct--ctatttatagagaaa 97  Q
    ||||||||||||||||||| ||||||||  |||||||| ||||||||||   ||||||||||||||    
T  30637112 aaacatcaactgtgaattttcggtgtgtaaaatgcactttgtgagctctaaatatttatagagaaa 30637177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 30641577 - 30641499
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||||||||||| |||  || | ||  |||||||||||||||| ||  |||||||| |||||||||||| ||||    
T  30641577 tttcggtgtgtggaatgaactacgtaatctacctatttatagagaaaaatctcaactaatatgtgagaaacttttggaa 30641499  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 17968434 - 17968397
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgt 59  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  17968434 ggaaaaacacaggaagcatcaactgtgaatttcggtgt 17968397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 40232873 - 40232777
Alignment:
Q  32 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 128  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  40232873 aggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 40232777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 3094688 - 3094794
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  3094688 ggaaaaacacaggaagtatcaactgtgaatttcggtgtgtggaatgcactgtgtgaactctctatttatagagaaagttcacaactaataagtgagaaac 3094787  T
Q  122 tttggga 128  Q
    |||||||    
T  3094788 tttggga 3094794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 17213939 - 17213832
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||||||||||||||||||||| | ||||||||||| | ||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  17213939 ggaaaaacataggaaacatcaactataaatttcggtgtatcgaatgtactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 17213840  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  17213839 tttgggaa 17213832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 41097437 - 41097347
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 128  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  41097437 catcaactgtgaatttcggtgtgtggaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggga 41097347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 13893915 - 13894022
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| |||||||||||| |||| |||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  13893915 ggaaaaacacaggaagcatcaactgtgattttcagtgtgtagaatgcattgtgtgaactctctatttatagagaaaattcacaactaataagtgagaaac 13894014  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  13894015 tttgggaa 13894022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 39243517 - 39243414
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  39243517 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 39243418  T
Q  123 ttgg 126  Q
    ||||    
T  39243417 ttgg 39243414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 39247072 - 39246969
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  39247072 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 39246973  T
Q  123 ttgg 126  Q
    ||||    
T  39246972 ttgg 39246969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 41387454 - 41387366
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  41387454 catcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 41387366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 1067080 - 1067187
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| |||||||||||||||||| |||    |||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  1067080 ggaaaaacacaggaagcatcaactgtgaatttcgttgtccataatgcaatgtgtgagttctctatttatagagaaaattcacaactaataagtgagaaac 1067179  T
Q  122 tttgggaa 129  Q
    ||| ||||    
T  1067180 tttaggaa 1067187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 14804103 - 14804210
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||| || | ||||||| || |||||||||||||||||||||||| |||| |||||||| |||||||||    
T  14804103 ggaaaagcacaggaatcatcaactgtgaatttcggggtctagaatgcattgcgtgagctctctatttatagagaaatttcacaactaataggtgagaaac 14804202  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  14804203 tttgggaa 14804210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 14819587 - 14819678
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||||||||||||| || | ||||||| ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  14819587 catcaactgtgaatttcggggtctagaatgcattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaa 14819678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 22428690 - 22428584
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  22428690 ggaaaagcacaggaatcatcaactgtgaatttcgg-gtccagaatgcattgtgtgagctctctatttatagagaaacttcacaactaataagtgagaaac 22428592  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  22428591 tttgggaa 22428584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 1924532 - 1924450
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  1924532 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 1924450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 20923546 - 20923464
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  20923546 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 20923464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 21498260 - 21498357
Alignment:
Q  32 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||||| |||  |||||||| |||||||||||||||||    
T  21498260 aggaagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcccaactaataggtgagaaactttgggaa 21498357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 52100716 - 52100610
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| |||||||||||  ||||||||||| ||||||| ||| ||||| ||||||||||||||||| |||| |||||||| |||||||||    
T  52100716 ggaaaaacacaggaatcatcaactgtgt-tttcggtgtgttgaatgcattgtatgagccctctatttatagagaaacttcacaactaataggtgagaaac 52100618  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  52100617 tttgggaa 52100610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 26198957 - 26199064
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||| |||| | |||| | |||| ||||    
T  26198957 ggaaaagcacaggaagcatcaactgtgaatttcggtgtacagaatgcattgtgtgagctctctatttatagagaaacttcacagctaaaaggtgaaaaac 26199056  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  26199057 tttgggaa 26199064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 16836765 - 16836701
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattca 102  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  16836765 catcaactgtgaatttcggtgtccagaatgcactgtgtgagctctctatttatagagaaaattca 16836701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 19725400 - 19725295
Alignment:
Q  21 gggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaa 120  Q
    ||||||| || ||||| |||||||||||||||||||||    ||||||| ||||||| |||||||||||||||||||  ||| ||||||||| |||||||    
T  19725400 gggaaaagcacaggaagcatcaactgtgaatttcggtgcccagaatgcaatgtgtgaactctctatttatagagaaa--tcacaactaataaatgagaaa 19725303  T
Q  121 ctttggga 128  Q
    ||||||||    
T  19725302 ctttggga 19725295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 33055636 - 33055723
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaat 110  Q
    |||||||| | ||| |||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||| |||| |||||||    
T  33055636 gaaaaacacaagaatcatcaactgtgaattttggtgtatagaatgcactgtgtgaactctctatttatagagaaagttcacaactaat 33055723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 2367643 - 2367749
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| ||||||||||||||||| ||||   ||||||| ||||||||||||||||||||||||||  || | | |||||| ||||||||||    
T  2367643 gaaaagcacaggaagcatcaactgtgaatttccgtgtccagaatgcattgtgtgagctctctatttatagagaagctttacagctaataggtgagaaact 2367742  T
Q  123 ttgggaa 129  Q
    |||||||    
T  2367743 ttgggaa 2367749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 2384740 - 2384634
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| ||||||||||||||||| ||||   ||||||| ||||||||||||||||||||||||||  || | | |||||| ||||||||||    
T  2384740 gaaaagcacaggaagcatcaactgtgaatttccgtgtccagaatgcattgtgtgagctctctatttatagagaagctttagagctaataggtgagaaact 2384641  T
Q  123 ttgggaa 129  Q
    |||||||    
T  2384640 ttgggaa 2384634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 23285300 - 23285227
Alignment:
Q  56 gtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||||| ||||||| | |||| ||| ||||||||||||||||||||| || ||||| ||||||| |||||||||    
T  23285300 gtgtgtagaatgcaatttgtgggctatctatttatagagaaaattcacaattaatatgtgagaacctttgggaa 23285227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 8267292 - 8267244
Alignment:
Q  77 agctctctatttatagagaaaattcaaaactaataagtgagaaactttg 125  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||||    
T  8267292 agctctctatttatagagaaagttcacaactaataagtgataaactttg 8267244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 23254648 - 23254584
Alignment:
Q  56 gtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaa 120  Q
    |||||| ||||||||| |||| ||||||||||||||||||||||| | || ||||| ||||||||    
T  23254648 gtgtgtagaatgcactttgtgtgctctctatttatagagaaaatttataattaatatgtgagaaa 23254584  T

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Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 26319667 - 26319593
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaa 97  Q
    ||||| || ||||| |||||||||||  ||| ||||||  ||||||| |||||||||||| ||||||||||||||    
T  26319667 gaaaatcacaggaagcatcaactgtgttttttggtgtgaagaatgcattgtgtgagctctttatttatagagaaa 26319593  T

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Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 19726975 - 19727067
Alignment:
Q  32 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttg 125  Q
    ||||| |||||||||||||||||||| |   ||||||  |||||||||||||||||||| ||||||   || ||||||||| ||||||| ||||    
T  19726975 aggaagcatcaactgtgaatttcggtatccagaatgct-tgtgtgagctctctatttatcgagaaatcacacaactaataaatgagaaattttg 19727067  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 26927192 - 26927153
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 61  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  26927192 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 26927153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 10135950 - 10135988
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgt 61  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  10135950 gaaaaacacaggaagcatcaactgtgaatttcggtgtgt 10135988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 27307406 - 27307360
Alignment:
Q  124 tgggaatttgtgtttagtctttttacttaatttccacacatgttcca 170  Q
    |||||||||||||||||||||||  || ||| |||||||||||||||    
T  27307406 tgggaatttgtgtttagtcttttacctcaatatccacacatgttcca 27307360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 27308342 - 27308280
Alignment:
Q  63 gaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttg 125  Q
    ||||| ||| ||||||| ||||||||||||||||||||||  |||||||   |||||||||||    
T  27308342 gaatgaactatgtgagcactctatttatagagaaaattcactactaatataagagaaactttg 27308280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 8273108 - 8273059
Alignment:
Q  124 tgggaatttgtgtttagtctttttacttaatttccacacatgttccaaca 173  Q
    |||||||||||||||| | |||| ||| |||||||||||||||| |||||    
T  8273108 tgggaatttgtgtttatttttttaactcaatttccacacatgtttcaaca 8273059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 14204495 - 14204447
Alignment:
Q  127 gaatttgtgttta--gtctttttacttaatttccacacatgttccaaca 173  Q
    |||||||||||||  | ||||||||| ||||||||||||||||||||||    
T  14204495 gaatttgtgtttatagactttttactcaatttccacacatgttccaaca 14204447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 51040982 - 51040942
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtg 62  Q
    ||||||||| || ||||||||||||||||||||| ||||||    
T  51040982 ggaaaaacacagaaaacatcaactgtgaatttcgatgtgtg 51040942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 8076649 - 8076755
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||    
T  8076649 ggaaaaacacatgaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacatctaataagtgagaaac 8076748  T
Q  122 tttggga 128  Q
    |||||||    
T  8076749 tttggga 8076755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 9650466 - 9650349
Alignment:
Q  11 ggagcagagagggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaat 110  Q
    |||| ||||||| ||||||| ||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  9650466 ggagaagagaggaaaaaacacaggaagcatcaactgtgaatttcgatttgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaat 9650367  T
Q  111 aagtgagaaactttggga 128  Q
    ||||||||||||||||||    
T  9650366 aagtgagaaactttggga 9650349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 27256836 - 27256942
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| |||||||||||||||||||||| | ||| ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  27256836 ggaaaagcacaggaagcatcaactgtgaatttcggtgtatcgaaagcactatgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 27256935  T
Q  122 tttggga 128  Q
    |||||||    
T  27256936 tttggga 27256942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 18426543 - 18426630
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  18426543 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 18426630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 40864858 - 40864752
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| |||||||||||||||||||||| | ||| | ||||||||||||||||||||||||||||| |||| |||||||||||||| |||    
T  40864858 ggaaaagcacaggaagcatcaactgtgaatttcggtgtatcgaaagtactgtgtgagctctctatttatagagaaagttcacaactaataagtgagtaac 40864759  T
Q  122 tttggga 128  Q
    |||||||    
T  40864758 tttggga 40864752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 20488563 - 20488651
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||||||    
T  20488563 catcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttgg 20488651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 8954746 - 8954655
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||| ||||||||| ||  |||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  8954746 catcaactgggaatttcggggttcggaatgcattgtgtgagctctctatttatagagaaacttcacaactaataagtgagaaactttgggaa 8954655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 16459875 - 16459772
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| || | || | |||||||||||||||||||    
T  16459875 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagggatagtttacaactaataagtgagaaact 16459776  T
Q  123 ttgg 126  Q
    ||||    
T  16459775 ttgg 16459772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 45169409 - 45169322
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  45169409 atcaactgtgaatttcggtgtgtagaatgaactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 45169322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 20485202 - 20485288
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaacttt 124  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||||    
T  20485202 catcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaacttt 20485288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 14928130 - 14928027
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||   || | |||||||||||||||||||    
T  14928130 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagtcctctatttatagagatggtttacaactaataagtgagaaact 14928031  T
Q  123 ttgg 126  Q
    ||||    
T  14928030 ttgg 14928027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 15351596 - 15351493
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||   || | |||||||||||||||||||    
T  15351596 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagtcctctatttatagagatggtttacaactaataagtgagaaact 15351497  T
Q  123 ttgg 126  Q
    ||||    
T  15351496 ttgg 15351493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 9008789 - 9008863
Alignment:
Q  55 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||||||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9008789 ggtgtgtggaatgcgctatgagagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaa 9008863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 838925 - 838820
Alignment:
Q  24 aaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactt 123  Q
    ||||||| ||||| ||||||| ||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||  |||||||| |||||||||||    
T  838925 aaaaacacaggaagcatcaaccgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcgcaactaataggtgagaaactt 838826  T
Q  124 tgggaa 129  Q
    ||||||    
T  838825 tgggaa 838820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 1204105 - 1204000
Alignment:
Q  24 aaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactt 123  Q
    ||||||| ||||| ||||||| ||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||  |||||||| |||||||||||    
T  1204105 aaaaacacaggaagcatcaaccgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcgcaactaataggtgagaaactt 1204006  T
Q  124 tgggaa 129  Q
    ||||||    
T  1204005 tgggaa 1204000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 47102138 - 47102203
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatt 87  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47102138 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatt 47102203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 29727299 - 29727211
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaat 110  Q
    |||||| || |||||||||||||||||||||| |||||   |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  29727299 ggaaaagcacaggaaacatcaactgtgaattttggtgtccagaatgcaccgtgtgagctctctatttatagagaaaattcacaactaat 29727211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 14259606 - 14259709
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||   |||| |||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||    
T  14259606 gaaaagcacaggaagcatcaactgtgaatttcaaagtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 14259705  T
Q  123 ttgg 126  Q
    ||||    
T  14259706 ttgg 14259709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 36477577 - 36477674
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    |||||||| ||||| |||||||||||||||||||||||       || ||||||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  36477577 gaaaaacacaggaagcatcaactgtgaatttcggtgtg-------cattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaact 36477669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 846093 - 845996
Alignment:
Q  32 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||| |||||||  |||||||||| || | ||||||| ||||||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  846093 aggaagcatcaaccatgaatttcggggtctagaatgcattgtgtgaactctctatttatagagaaatttcacaactaataggtgagaaactttgggaa 845996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 853470 - 853373
Alignment:
Q  32 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||| |||||||  |||||||||| || | ||||||| ||||||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  853470 aggaagcatcaaccatgaatttcggggtctagaatgcattgtgtgaactctctatttatagagaaatttcacaactaataggtgagaaactttgggaa 853373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 1211474 - 1211377
Alignment:
Q  32 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||| |||||||  |||||||||| || | ||||||| ||||||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  1211474 aggaagcatcaaccatgaatttcggggtctagaatgcattgtgtgaactctctatttatagagaaatttcacaactaataggtgagaaactttgggaa 1211377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 19096853 - 19096957
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaattt-cggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaa 120  Q
    ||||||||| | ||| |||||||||||||||| ||| ||   ||||||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  19096853 ggaaaaacacatgaagcatcaactgtgaattttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaa 19096952  T
Q  121 ctttg 125  Q
    |||||    
T  19096953 ctttg 19096957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 32302439 - 32302542
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||  ||| || ||| |||||||||||| | || | ||||||||||||||||| |    
T  32302439 gaaaagcacaggaaacatcaactgtgaatttcggtgtgtagaatgcaccatgtcagttctatatttatagagatagtttacaactaataagtgagaaatt 32302538  T
Q  123 ttgg 126  Q
    ||||    
T  32302539 ttgg 32302542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 10532295 - 10532221
Alignment:
Q  55 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||||||||||||||||  ||||  |||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  10532295 ggtgtgtggaatgcactacgtgaattctctacttatagagaaaattcacaactaataagtgagaaactttgggaa 10532221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 128
Target Start/End: Original strand, 19640914 - 19641004
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 128  Q
    |||||||||||||||||||||| | ||| | ||  ||||| | ||||||||||||||||| |||| |||||||||||||||||||||||||    
T  19640914 catcaactgtgaatttcggtgtatcgaaagaacaatgtgaacactctatttatagagaaagttcacaactaataagtgagaaactttggga 19641004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 10499566 - 10499494
Alignment:
Q  55 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggg 127  Q
    |||||||||||||||||    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10499566 ggtgtgtggaatgcactaccagagttctctatttatagagaaaattcacaactaataagtgagaaactttggg 10499494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 10504595 - 10504523
Alignment:
Q  55 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggg 127  Q
    |||||||||||||||||    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10504595 ggtgtgtggaatgcactaccagagttctctatttatagagaaaattcacaactaataagtgagaaactttggg 10504523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 11017557 - 11017473
Alignment:
Q  41 caactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttg 125  Q
    ||||||||||||||||||  | ||||| |||| | || ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  11017557 caactgtgaatttcggtggatagaatgtactgcgcgacctctctatttatatagaaaattcacaactaataagtgagaaactttg 11017473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 13343891 - 13343817
Alignment:
Q  55 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||||||||| |   |||| || |||||||||||||||||||| |||||||||| |||||||||||||||    
T  13343891 ggtgtgtggaatgcattacctgagttcactatttatagagaaaattcacaactaataagagagaaactttgggaa 13343817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 9649893 - 9649844
Alignment:
Q  124 tgggaatttgtgtttagtctttttacttaatttccacacatgttccaaca 173  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  9649893 tgggaatttgtgtttagtcttttaactcaatttccacacatgttccaaca 9649844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 16580844 - 16580932
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    |||||||||||||||||| |||||  ||||||||||||||| || |||||||| | || | || | || ||||||||||||||||||||    
T  16580844 catcaactgtgaatttcgttgtgtacaatgcactgtgtgagttccctatttattgggatagtttacaattaataagtgagaaactttgg 16580932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 2629290 - 2629353
Alignment:
Q  57 tgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaa 120  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||| | |||||||| ||||||||    
T  2629290 tgtgtggaatgaactatgtgagctctatatttatagagaaaatttacaactaatatgtgagaaa 2629353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 47102692 - 47102742
Alignment:
Q  124 tgggaatttgtgtttagtcttttt-acttaatttccacacatgttccaaca 173  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  47102692 tgggaatttgtgtttagtctttttaactcaatttccacacatgttccaaca 47102742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 1043847 - 1043922
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||||||||  ||||| | | ||| |||||| ||||||||||||||||||| || ||||| ||||||||||||||    
T  1043847 tttcggtgtgcagaatgaattatgtcagctctttatttatagagaaaattcacaattaatatgtgagaaactttgg 1043922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 11297381 - 11297455
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttg 125  Q
    ||||||||||||||||  |||  |||| ||  |||||||||||||||| ||| |||||||| |||||||||||||    
T  11297381 tttcggtgtgtggaataaactacgtgatctacctatttatagagaaaaatcacaactaatatgtgagaaactttg 11297455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 15566012 - 15566081
Alignment:
Q  58 gtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||||||||| ||||| ||||||||  ||||||| |||||| ||| |||||||| |||||||||||| ||||    
T  15566012 gtgtggaatgaactgtatgagctct--atttatatagaaaactcacaactaatatgtgagaaacttttggaa 15566081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 26341831 - 26341870
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgt 61  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  26341831 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgt 26341870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 43457143 - 43457097
Alignment:
Q  127 gaatttgtgtttagtctttttacttaatttccacacatgttccaaca 173  Q
    ||||||||||||| |||||| ||||||||| ||| ||||||||||||    
T  43457143 gaatttgtgtttattcttttaacttaattttcacgcatgttccaaca 43457097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 10488759 - 10488686
Alignment:
Q  56 gtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||||||||||| ||| | |||||||| |||||||| | |||| ||| ||||||||   |||||||||||||||    
T  10488759 gtgtgtggaatgaactatatgagctctatatttataaaaaaaaatcacaactaatataggagaaactttgggaa 10488686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 10499056 - 10499011
Alignment:
Q  128 aatttgtgtttagtctttttacttaatttccacacatgttccaaca 173  Q
    ||||| ||||||||||||| | | ||||||||||||||||||||||    
T  10499056 aatttatgtttagtcttttaattcaatttccacacatgttccaaca 10499011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 10504085 - 10504040
Alignment:
Q  128 aatttgtgtttagtctttttacttaatttccacacatgttccaaca 173  Q
    ||||| ||||||||||||| | | ||||||||||||||||||||||    
T  10504085 aatttatgtttagtcttttaattcaatttccacacatgttccaaca 10504040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 13343356 - 13343311
Alignment:
Q  128 aatttgtgtttagtctttttacttaatttccacacatgttccaaca 173  Q
    ||||||||||| ||||||| | | ||||||||||||||||||||||    
T  13343356 aatttgtgttttgtcttttaattcaatttccacacatgttccaaca 13343311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 44509874 - 44509829
Alignment:
Q  16 agagagggaaaaacataggaaacatcaactgtgaatttcggtgtgt 61  Q
    ||||||| ||||||| ||||||||||||| ||||||||| ||||||    
T  44509874 agagaggaaaaaacacaggaaacatcaaccgtgaatttcagtgtgt 44509829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 23866884 - 23866924
Alignment:
Q  124 tgggaatttgtgtttagtctttttacttaatttccacacat 164  Q
    ||||||||||||||||||||||| ||| ||||| |||||||    
T  23866884 tgggaatttgtgtttagtcttttaactcaattttcacacat 23866924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 7e-39; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 13521491 - 13521374
Alignment:
Q  11 ggagcagagagggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaat 110  Q
    |||| ||||||| ||||||| ||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  13521491 ggagaagagaggaaaaaacacaggaagcatcaactgtgaatttcgatttgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaat 13521392  T
Q  111 aagtgagaaactttggga 128  Q
    ||||||||||||||||||    
T  13521391 aagtgagaaactttggga 13521374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 3997557 - 3997451
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| ||||||||||||||||||||||||| || ||| | ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  3997557 ggaaaaacacaggaagcatcaactgtgaatttcggtgtgtgtaaagcaatatgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 3997458  T
Q  122 tttggga 128  Q
    |||||||    
T  3997457 tttggga 3997451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 7902606 - 7902500
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| |||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  7902606 ggaaaagcacaggaagcatcaaatgtgaatttcggtgtgtgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 7902507  T
Q  122 tttggga 128  Q
    |||||||    
T  7902506 tttggga 7902500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 15225765 - 15225871
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  15225765 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactctgtgagctctctatttatagagaaatttcacaactaataggtgagaaact 15225864  T
Q  123 ttgggaa 129  Q
    |||||||    
T  15225865 ttgggaa 15225871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 47575277 - 47575361
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  47575277 catcaactttgaatttcggtgtgtggaatgcactgtgtgagctctctttttatagagaaaattcacaactaataagtgagaaact 47575361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 31297974 - 31297884
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 128  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||    
T  31297974 catcaattgtgaatttcggtgtatggaatgcactgtgtgagctctctatttatagagagagttcacaactaataagtgagaaactttggga 31297884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 34561023 - 34561129
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| |||||||||||||||||||||| | ||| ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  34561023 ggaaaagcacaggaagcatcaactgtgaatttcggtgtatcgaaagcactatgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 34561122  T
Q  122 tttggga 128  Q
    |||||||    
T  34561123 tttggga 34561129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 12488414 - 12488501
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  12488414 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 12488501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 14868563 - 14868456
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  14868563 ggaaaagcacaggaatcatcaactgtgaatttcggggtccagaatgcactgtgtgagctctctatttatagagaaacttcacaactaataaatgagaaac 14868464  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  14868463 tttgggaa 14868456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 14877371 - 14877478
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  14877371 ggaaaagcacaggaatcatcaactgtgaatttcggggtccagaatgcactgtgtgagctctctatttatagagaaacttcacaactaataaatgagaaac 14877470  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  14877471 tttgggaa 14877478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 10713540 - 10713643
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||| | ||||||| |||||||||||    
T  10713540 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatgatttacaactaatgagtgagaaact 10713639  T
Q  123 ttgg 126  Q
    ||||    
T  10713640 ttgg 10713643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 10927310 - 10927413
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||| | ||||||| |||||||||||    
T  10927310 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatgatttacaactaatgagtgagaaact 10927409  T
Q  123 ttgg 126  Q
    ||||    
T  10927410 ttgg 10927413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 14899095 - 14899004
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||    
T  14899095 catcaactgtgaatttcggggtccagaatgcactgtgtgagctctctatttatagagaaacttcacaactaataaatgagaaactttgggaa 14899004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 15011310 - 15011207
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||    
T  15011310 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtataatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 15011211  T
Q  123 ttgg 126  Q
    ||||    
T  15011210 ttgg 15011207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 14953533 - 14953451
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  14953533 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 14953451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 25690610 - 25690692
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  25690610 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac 25690692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 8660898 - 8660791
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| |||||||||||||| |||||||||  | |||||||||||||||||||||||| ||||||||||||  ||||||||||||  |||    
T  8660898 ggaaaagcacaggaagcatcaactgtgaatctcggtgtgtatactgcactgtgtgagctctctatttacagagaaaattcactactaataagtgaagaac 8660799  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  8660798 tttgggaa 8660791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 9185179 - 9185072
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| |||||||| |||||||||| ||   ||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  9185179 ggaaaagcacaggaatcatcaactctgaatttcggggtccagaatgcattgtgtgagctctctatttgtagagaaatttcacaactaataagtgagaaac 9185080  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  9185079 tttgggaa 9185072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 9191044 - 9190937
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| |||||||| |||||||||| ||    |||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  9191044 ggaaaagcacaggaatcatcaactctgaatttcggggtccataatgcattgtgtgagctctctatttgtagagaaatttcacaactaataagtgagaaac 9190945  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  9190944 tttgggaa 9190937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 41817381 - 41817455
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaa 96  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  41817381 ggaaaaacacaagaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagctctctatttacagagaa 41817455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 26034799 - 26034894
Alignment:
Q  34 gaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||||||| |||||| ||||| | ||   ||||||| ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  26034799 gaaacatcgactgtgtatttcagggtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaa 26034894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 39320173 - 39320267
Alignment:
Q  34 gaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||||||||||  | ||||||||| ||| ||||| | |||||||||||||||||||||| |||| |||| ||||||||||||||||| ||||||||    
T  39320173 gaaacatcaacgttaaatttcggtttgtcgaatgaattgtgtgagctctctatttatagtgaaagttcacaactaataagtgagaaa-tttgggaa 39320267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 13520918 - 13520869
Alignment:
Q  124 tgggaatttgtgtttagtctttttacttaatttccacacatgttccaaca 173  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  13520918 tgggaatttgtgtttagtcttttaactcaatttccacacatgttccaaca 13520869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 52742684 - 52742616
Alignment:
Q  57 tgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttg 125  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| | |||||||| | |||||| ||||    
T  52742684 tgtgtggaatgaactatgtgagctctctatttatagagaaaattgacaactaatacgcgagaaattttg 52742616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 18023221 - 18023276
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgag 78  Q
    ||||| || ||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  18023221 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcagtgtgtgag 18023276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 32545533 - 32545579
Alignment:
Q  73 tgtgagctctctatttatagagaaaattcaaaactaataagtgagaa 119  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||    
T  32545533 tgtgagctctctatttatagagaaaattcgcaactaatatgtgagaa 32545579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 26188129 - 26188056
Alignment:
Q  56 gtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||| |||||||||||  ||||| |||||||||||| ||  |||||| |||||||| |||||||||||| ||||    
T  26188129 gtgtctggaatgcactacgtgagttctctatttatatagttaattcacaactaatatgtgagaaactttaggaa 26188056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 55073774 - 55073847
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaacttt 124  Q
    |||||||||||  |||| |||  ||||| ||||||||||||||||||||||| ||||||||  || ||||||||    
T  55073774 tttcggtgtgtataatgaactacgtgagatctctatttatagagaaaattcacaactaatatatgtgaaacttt 55073847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 43477452 - 43477408
Alignment:
Q  82 tctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||||||||||||||||||| || |||||||||| |||||||||    
T  43477452 tctatttatagagaaaattcacaattaataagtgataaactttgg 43477408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 5270894 - 5270856
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgt 61  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  5270894 gaaaaacacaggaagcatcaactgtgaatttcggtgtgt 5270856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 39320722 - 39320768
Alignment:
Q  127 gaatttgtgtttagtctttttacttaatttccacacatgttccaaca 173  Q
    |||||||| |||| |||||| ||| ||||||||||||||||||||||    
T  39320722 gaatttgtatttaatcttttaactcaatttccacacatgttccaaca 39320768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 30867 - 30970
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| |||||||| |||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  30867 gaaaagcataggaagcatcaactgtgaatttcggtgtcttgaatgcattgtgtgagctctctatttatagagaaatttcacaactaataagtgagaaact 30966  T
Q  123 ttgg 126  Q
    ||||    
T  30967 ttgg 30970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 121166 - 121269
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  121166 gaaaagcataggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 121265  T
Q  123 ttgg 126  Q
    ||||    
T  121266 ttgg 121269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 47468 - 47362
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| |||||||||||||||||||||| || || ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  47468 ggaaaagcacaggaagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 47369  T
Q  122 tttggga 128  Q
    |||||||    
T  47368 tttggga 47362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 52412 - 52306
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| |||||||||||||||||||||| || || ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  52412 ggaaaagcacaggaagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 52313  T
Q  122 tttggga 128  Q
    |||||||    
T  52312 tttggga 52306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 30284 - 30390
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| |||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  30284 gaaaagcataggaagcatcaactgtgaatttcggggtgtcgaatgcagtgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaact 30383  T
Q  123 ttgggaa 129  Q
    |||||||    
T  30384 ttgggaa 30390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 71740 - 71838
Alignment:
Q  32 aggaaacatcaactgtgaa-tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  71740 aggaagcatcaactgtgaaattttggtgtgtagaatgcactgtgtgagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaa 71838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 10470 - 10367
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||    
T  10470 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaact 10371  T
Q  123 ttgg 126  Q
    ||||    
T  10370 ttgg 10367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 7486 - 7580
Alignment:
Q  32 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  7486 aggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 7580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 49479 - 49373
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| | |||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  49479 ggaaaaacacaggaagcgtcaactgtgaatttcggtgtattgaaagcactgtgtgagttctctatttatagagaaagttcacaactaataagtgagaaac 49380  T
Q  122 tttggga 128  Q
    |||||||    
T  49379 tttggga 49373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 149155 - 149261
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||| ||||| | |||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  149155 ggaaaaacacaggaagcgtcaactgtgaatttcggtgtattgaaagcactgtgtgagttctctatttatagagaaagttcacaactaataagtgagaaac 149254  T
Q  122 tttggga 128  Q
    |||||||    
T  149255 tttggga 149261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 10904 - 10817
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  10904 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 10817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 32063 - 31976
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  32063 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 31976  T

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Target: scaffold0141 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 13490 - 13403
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  13490 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 13403  T

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Target: scaffold0132 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 24791 - 24684
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  24791 ggaaaagcacaggaatcatcaactgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaataagtgagaaac 24692  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  24691 tttgggaa 24684  T

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Target: scaffold0124 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 21464 - 21377
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||    
T  21464 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgg 21377  T

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Target: scaffold0011 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 127003 - 127106
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||    
T  127003 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaact 127102  T
Q  123 ttgg 126  Q
    ||||    
T  127103 ttgg 127106  T

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Target: scaffold0041 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 35199 - 35093
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| |||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||| |||| ||||||||||||| || |    
T  35199 ggaaaagcacaggaagcatcaactgtgaatttcggtgtatcgaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgacaagc 35100  T
Q  122 tttggga 128  Q
    |||||||    
T  35099 tttggga 35093  T

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Target: scaffold1910 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 466 - 570
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    |||||||| ||||| |||||||||||||||||||| |   ||||||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  466 gaaaaacacaggaagcatcaactgtgaatttcggtatccagaatgcattgtgtgagctctctatttatagagaaacttcacaactaataggtgagaaact 565  T
Q  123 ttggg 127  Q
    |||||    
T  566 ttggg 570  T

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Target: scaffold0452 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 12447 - 12359
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||||||    
T  12447 catcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttgg 12359  T

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Target: scaffold0431 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 14956 - 14868
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | || | |||||||||||||||||||||||    
T  14956 catcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttgg 14868  T

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Target: scaffold0020 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 725 - 629
Alignment:
Q  32 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 128  Q
    ||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||||||    
T  725 aggaagcatcaactgtgaatttcggtgtattgaaagcactgtgtgagctctctatatgtagagaaagttcataactaataagtgagaaactttggga 629  T

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Target: scaffold0044 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 81157 - 81264
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||||| |||  |||||||| |||||||||    
T  81157 ggaaaagcacaggaatcatcaactgtgaatttcggggtgttgaatgcattgtgtgagccctctatttatagagaaacttcccaactaataggtgagaaac 81256  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  81257 tttgggaa 81264  T

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Target: scaffold0044; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 64775 - 64866
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||||||||||||| |||| | | ||| ||||||||| ||||||||||||||||| |||  |||||||| |||||||||||||||||    
T  64775 catcaactgtgaatttcggggtgttgtacgcattgtgtgagccctctatttatagagaaacttcccaactaataggtgagaaactttgggaa 64866  T

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Target: scaffold0018 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 21907 - 22010
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    |||||||| ||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| | || | |||| ||||||||||||||    
T  21907 gaaaaacacaggaagcatcaactgtgaatttcagtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaacttataagtgagaaact 22006  T
Q  123 ttgg 126  Q
    ||||    
T  22007 ttgg 22010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 193762 - 193655
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||||||   ||||||| ||||||||| ||||||||||||||||| |||| |||||||| |||||||||    
T  193762 ggaaaagcacaggaagcatcaactgtgaatttcggtgtcctgaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaac 193663  T
Q  122 tttgggaa 129  Q
    ||||||||    
T  193662 tttgggaa 193655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 188075 - 187972
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| ||||||||||| ||||||| ||   ||||||| ||||||| | || |||||||||||||| |||| |||| ||| ||||||||||    
T  188075 gaaaagcacaggaagcatcaactgtgtatttcggggtcctgaatgcattgtgtgaaccctatatttatagagaaacttcacaactgataggtgagaaact 187976  T
Q  123 ttgg 126  Q
    ||||    
T  187975 ttgg 187972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 1104 - 1186
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||    
T  1104 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac 1186  T

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Target: scaffold0070 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 59025 - 59131
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| |||||| | ||||||||||||| ||||| ||| | ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  59025 ggaaaagcacaggaagcatcaattatgaatttcggtgtatggaaagcattatgtgagctctctatttatagagaaagttcacaactaataagtgagaaac 59124  T
Q  122 tttggga 128  Q
    |||||||    
T  59125 tttggga 59131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 63284 - 63333
Alignment:
Q  79 ctctctatttatagagaaaattcaaaactaataagtgagaaactttggga 128  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  63284 ctctctatttatagagaaagttcacaactaataagtgagaaactttggga 63333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 19707 - 19610
Alignment:
Q  32 aggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||| ||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  19707 aggaagcatcaactgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaacttcacaactaataagtgagaaactttaggaa 19610  T

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Target: scaffold0357 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 3842 - 3735
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||| |||| |||||||| |||||||||    
T  3842 ggaaaagcacaggaagcatcaactgtgaatttcggggttcagaatgcattgtgtgagctctctatttatagagaaacttcacaactaataggtgagaaac 3743  T
Q  122 tttgggaa 129  Q
    ||| ||||    
T  3742 tttaggaa 3735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 35489 - 35402
Alignment:
Q  39 atcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||   || | |||||||||||||||||||||||    
T  35489 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagattgtttacaactaataagtgagaaactttgg 35402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 5375 - 5273
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| |||||||||||||||||||||||| | |||||||||||||| ||||||||||||| || | || | |||||||||||||||||||    
T  5375 gaaaagcacaggaagcatcaactgtgaatttcggtgtgtaggatgcactgtgtgagttctctatttatagggatagtttacaactaataagtgagaaact 5276  T
Q  123 ttg 125  Q
    |||    
T  5275 ttg 5273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 7003 - 7091
Alignment:
Q  38 catcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgg 126  Q
    |||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| | || | ||||||||||| |||||||||||    
T  7003 catcaactatgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagttagaaactttgg 7091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 5831 - 5877
Alignment:
Q  127 gaatttgtgtttagtctttttacttaatttccacacatgttccaaca 173  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  5831 gaatttgtgtttagtattttaactcaatttccacacatgttccaaca 5877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 7767 - 7870
Alignment:
Q  23 gaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaact 122  Q
    ||||| || ||||| ||| || |||||||||| |||||| |||||||||||||||| |||||||||||||||| | || | |||||||||| ||||||||    
T  7767 gaaaatcacaggaagcataaattgtgaatttctgtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagcgagaaact 7866  T
Q  123 ttgg 126  Q
    ||||    
T  7867 ttgg 7870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 256444 - 256518
Alignment:
Q  55 ggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    |||||||| |||||||| |||||  ||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  256444 ggtgtgtgaaatgcactatgtgatttctctatttatagagaatattcacaactaataagtgagaaactttgggaa 256518  T

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Target: scaffold0008; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 257801 - 257838
Alignment:
Q  127 gaatttgtgtttagtctttttacttaatttccacacat 164  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  257801 gaatttgtgtttagtcttttaactcaatttccacacat 257838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 199791 - 199894
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaac 121  Q
    |||||| || ||||| ||||||||||||||||||||     ||||||| ||||||||||||||||||||||||||| |||  |||||||| |||||||||    
T  199791 ggaaaagcacaggaatcatcaactgtgaatttcggtcca--gaatgcattgtgtgagctctctatttatagagaaacttcgcaactaataggtgagaaac 199888  T
Q  122 tttggg 127  Q
     |||||    
T  199889 attggg 199894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0932 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0932
Description:

Target: scaffold0932; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 1105 - 1027
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||||||||||| |||  |||| ||  |||||||||||||||| ||| |||||||| |||||||||||||||||    
T  1105 tttcggtgtgtggaatgaactacgtgatctacctatttatagagaaaaatcataactaatatgtgagaaactttgggaa 1027  T

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Target: scaffold0478 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 8215 - 8293
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||||||||||| |||  |||| ||  |||||||||||||||| ||| |||||||| |||||||||||||||||    
T  8215 tttcggtgtgtggaatgaactaggtgatctacctatttatagagaaaaatcataactaatatgtgagaaactttgggaa 8293  T

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Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 22320 - 22372
Alignment:
Q  34 gaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctat 86  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| |||||||    
T  22320 gaaaaatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctat 22372  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 22274 - 22337
Alignment:
Q  22 ggaaaaacataggaaacatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctcta 85  Q
    |||||| || ||||| ||||||||||||||||||| ||   ||||||| |||||||||||||||    
T  22274 ggaaaaccacaggaagcatcaactgtgaatttcggggtccagaatgcattgtgtgagctctcta 22337  T

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Target: scaffold0720 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 6017 - 5939
Alignment:
Q  51 tttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaaactttgggaa 129  Q
    ||||||||||||||||| |||  || | ||  ||||||||||||||||  || |||||||| |||||||||||| ||||    
T  6017 tttcggtgtgtggaatgaactacgtaatctacctatttatagagaaaaagcacaactaatatgtgagaaactttcggaa 5939  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 84074 - 84120
Alignment:
Q  128 aatttgtgtttagtctttttactt-aatttccacacatgttccaaca 173  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||    
T  84074 aatttgtgtttagtctttttaatccaatttccacacatgttccaaca 84120  T

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Target: scaffold0232 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 22583 - 22644
Alignment:
Q  56 gtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgag 117  Q
    |||||| |||||||||||| ||| ||||||||||||| || | || | ||||||||||||||    
T  22583 gtgtgtagaatgcactgtgagagttctctatttatagggatagtttacaactaataagtgag 22644  T

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