View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20611_low_21 (Length: 250)
Name: NF20611_low_21
Description: NF20611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20611_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 32534673 - 32534906
Alignment:
| Q |
1 |
tcatatcagtaaatttctgggatgctattcagttttccttcaatactcactaatactacaagtctacaaaccatagtgctgactttctcttcaatcatca |
100 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32534673 |
tcatatcactaaatttctgggatgctattcagttttccttcaatactcaccaatactacaagtctacaaaccatagtgctgactttctcttcaatcatca |
32534772 |
T |
|
| Q |
101 |
caaataccagaaaccatagttctaactttgtgtatgttctattaagtgcaaatttttgaatatttgtttgtctcatactatttcagattcaattttcttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
32534773 |
caaataccagaaaccatagttctaactttgtgtatgttctattaagtgcaaatttttgaatatttgtttgtctcatactatttcagattcaattttcttt |
32534872 |
T |
|
| Q |
201 |
ttggttatcatgttatcagtacgaagttttcact |
234 |
Q |
| |
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|||||||||||||||||||||| ||||||||||| |
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| T |
32534873 |
ttggttatcatgttatcagtacaaagttttcact |
32534906 |
T |
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