View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20611_low_24 (Length: 239)

Name: NF20611_low_24
Description: NF20611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20611_low_24
NF20611_low_24
[»] chr1 (47 HSPs)
chr1 (18-239)||(6770197-6770418)
chr1 (157-239)||(29210412-29210494)
chr1 (158-239)||(38162850-38162931)
chr1 (155-239)||(18043159-18043243)
chr1 (155-239)||(47009990-47010074)
chr1 (155-239)||(51065853-51065937)
chr1 (157-239)||(29657770-29657852)
chr1 (157-239)||(45431278-45431359)
chr1 (158-239)||(5694321-5694402)
chr1 (152-239)||(12072167-12072254)
chr1 (155-238)||(30657605-30657688)
chr1 (156-239)||(42770095-42770178)
chr1 (156-239)||(47532775-47532857)
chr1 (158-239)||(17333387-17333467)
chr1 (158-239)||(24178568-24178649)
chr1 (154-239)||(51368890-51368975)
chr1 (156-239)||(15227737-15227820)
chr1 (157-239)||(13961211-13961292)
chr1 (154-239)||(12306914-12306998)
chr1 (191-239)||(15282619-15282667)
chr1 (156-239)||(9266833-9266916)
chr1 (157-239)||(19031920-19032002)
chr1 (156-237)||(29683193-29683275)
chr1 (160-238)||(38702039-38702117)
chr1 (158-239)||(3784818-3784899)
chr1 (158-239)||(30294486-30294567)
chr1 (190-238)||(39497339-39497387)
chr1 (165-237)||(48383218-48383290)
chr1 (191-239)||(50128277-50128325)
chr1 (191-238)||(3097692-3097739)
chr1 (147-238)||(10976008-10976099)
chr1 (156-239)||(14350382-14350465)
chr1 (156-239)||(35985726-35985808)
chr1 (157-239)||(48071482-48071563)
chr1 (159-228)||(19011112-19011180)
chr1 (191-239)||(23473569-23473617)
chr1 (155-239)||(39912384-39912468)
chr1 (191-239)||(52749635-52749683)
chr1 (191-238)||(43286755-43286802)
chr1 (167-239)||(36446430-36446501)
chr1 (158-221)||(28481844-28481907)
chr1 (156-217)||(28726032-28726094)
chr1 (191-237)||(45449351-45449397)
chr1 (158-239)||(38335170-38335250)
chr1 (202-239)||(52431625-52431662)
chr1 (160-236)||(9413987-9414062)
chr1 (202-238)||(37315373-37315409)
[»] chr2 (35 HSPs)
chr2 (156-238)||(31390010-31390092)
chr2 (155-239)||(561623-561707)
chr2 (156-239)||(30486208-30486291)
chr2 (157-237)||(32360976-32361056)
chr2 (156-239)||(34442637-34442719)
chr2 (157-239)||(26891768-26891850)
chr2 (158-239)||(20552931-20553012)
chr2 (157-238)||(22887749-22887830)
chr2 (158-239)||(31438646-31438727)
chr2 (158-237)||(8969514-8969591)
chr2 (156-239)||(26387169-26387252)
chr2 (153-239)||(2898067-2898152)
chr2 (165-239)||(4381802-4381876)
chr2 (158-239)||(44587902-44587983)
chr2 (156-239)||(27856501-27856584)
chr2 (156-239)||(38590979-38591062)
chr2 (157-238)||(6580188-6580269)
chr2 (158-239)||(43637165-43637245)
chr2 (191-239)||(22567635-22567683)
chr2 (156-239)||(22068425-22068507)
chr2 (156-239)||(32860100-32860183)
chr2 (154-239)||(11021327-11021411)
chr2 (158-239)||(38296178-38296258)
chr2 (184-239)||(5093644-5093699)
chr2 (165-239)||(3668218-3668291)
chr2 (156-238)||(4022585-4022666)
chr2 (157-238)||(1859161-1859242)
chr2 (191-228)||(5881250-5881287)
chr2 (202-239)||(15079063-15079100)
chr2 (160-236)||(16807332-16807409)
chr2 (160-236)||(16846613-16846690)
chr2 (191-239)||(27584771-27584819)
chr2 (147-188)||(35851925-35851966)
chr2 (202-239)||(39531868-39531905)
chr2 (191-239)||(13574134-13574182)
[»] chr8 (41 HSPs)
chr8 (155-239)||(168463-168547)
chr8 (156-239)||(27988604-27988687)
chr8 (156-239)||(28045906-28045989)
chr8 (157-239)||(43119216-43119298)
chr8 (151-238)||(13643005-13643092)
chr8 (151-238)||(13743430-13743517)
chr8 (156-238)||(4537850-4537932)
chr8 (158-239)||(30675677-30675758)
chr8 (156-239)||(4648193-4648275)
chr8 (158-237)||(16394168-16394247)
chr8 (148-239)||(16785077-16785167)
chr8 (156-239)||(33357234-33357317)
chr8 (157-239)||(11112638-11112720)
chr8 (160-237)||(20831660-20831737)
chr8 (158-239)||(34228682-34228763)
chr8 (167-239)||(29444245-29444317)
chr8 (171-239)||(42035086-42035154)
chr8 (156-237)||(9063159-9063239)
chr8 (158-235)||(12652630-12652707)
chr8 (191-239)||(7304623-7304671)
chr8 (156-228)||(10618016-10618088)
chr8 (159-239)||(16888649-16888728)
chr8 (156-239)||(9278210-9278293)
chr8 (181-239)||(16890585-16890643)
chr8 (165-239)||(32113915-32113989)
chr8 (185-239)||(36730471-36730525)
chr8 (158-239)||(2805365-2805446)
chr8 (158-239)||(37373206-37373286)
chr8 (159-239)||(21595848-21595927)
chr8 (191-239)||(28626801-28626849)
chr8 (191-239)||(40831310-40831358)
chr8 (166-225)||(36923782-36923841)
chr8 (179-239)||(9254006-9254066)
chr8 (191-239)||(9537929-9537977)
chr8 (157-235)||(3930342-3930419)
chr8 (157-239)||(12203854-12203935)
chr8 (157-239)||(12448282-12448363)
chr8 (192-239)||(34192809-34192856)
chr8 (158-228)||(29235235-29235305)
chr8 (158-218)||(39751597-39751658)
chr8 (191-239)||(10870385-10870433)
[»] chr3 (39 HSPs)
chr3 (155-239)||(18014669-18014753)
chr3 (157-239)||(272219-272301)
chr3 (158-239)||(4168183-4168264)
chr3 (154-239)||(52520677-52520762)
chr3 (155-239)||(46352631-46352715)
chr3 (156-239)||(40362685-40362768)
chr3 (157-239)||(41304004-41304086)
chr3 (157-239)||(49893330-49893412)
chr3 (158-239)||(39074419-39074500)
chr3 (158-239)||(43786871-43786952)
chr3 (156-239)||(858587-858670)
chr3 (158-239)||(20923992-20924073)
chr3 (158-239)||(48725271-48725352)
chr3 (158-239)||(52246582-52246663)
chr3 (156-237)||(11308317-11308398)
chr3 (182-239)||(22248910-22248967)
chr3 (158-238)||(51818981-51819061)
chr3 (156-239)||(13159895-13159978)
chr3 (165-239)||(41554045-41554118)
chr3 (165-239)||(50395667-50395741)
chr3 (167-239)||(42964354-42964426)
chr3 (179-238)||(49529372-49529434)
chr3 (167-238)||(43269845-43269916)
chr3 (151-239)||(53489929-53490019)
chr3 (181-239)||(2391630-2391688)
chr3 (181-239)||(2393391-2393449)
chr3 (158-239)||(2119431-2119512)
chr3 (158-239)||(10617389-10617469)
chr3 (181-238)||(29241660-29241717)
chr3 (191-239)||(7468444-7468492)
chr3 (196-239)||(31514829-31514872)
chr3 (165-239)||(50359291-50359364)
chr3 (158-239)||(28139309-28139390)
chr3 (191-239)||(2505382-2505430)
chr3 (191-239)||(2938145-2938193)
chr3 (158-238)||(42548096-42548175)
chr3 (191-227)||(52718200-52718236)
chr3 (190-239)||(50299050-50299099)
chr3 (158-218)||(2362801-2362861)
[»] chr6 (33 HSPs)
chr6 (145-236)||(12525706-12525797)
chr6 (158-239)||(23629681-23629761)
chr6 (151-239)||(3515759-3515847)
chr6 (156-239)||(1391283-1391365)
chr6 (160-239)||(2350654-2350733)
chr6 (156-239)||(20897946-20898029)
chr6 (156-239)||(23402136-23402219)
chr6 (158-239)||(392096-392177)
chr6 (158-238)||(21878453-21878533)
chr6 (158-238)||(29978233-29978312)
chr6 (156-239)||(7851264-7851347)
chr6 (152-239)||(27433486-27433573)
chr6 (158-239)||(12145222-12145303)
chr6 (156-239)||(34396632-34396715)
chr6 (157-239)||(13529454-13529536)
chr6 (157-239)||(29451220-29451301)
chr6 (153-239)||(32929613-32929699)
chr6 (182-239)||(13417067-13417124)
chr6 (156-239)||(4215693-4215776)
chr6 (168-239)||(32985298-32985369)
chr6 (157-239)||(31280320-31280402)
chr6 (182-239)||(34477655-34477712)
chr6 (155-235)||(18276724-18276803)
chr6 (191-239)||(26467229-26467277)
chr6 (156-228)||(14559920-14559992)
chr6 (191-239)||(25165518-25165566)
chr6 (191-239)||(34851954-34852002)
chr6 (153-239)||(3026114-3026198)
chr6 (160-239)||(9660988-9661067)
chr6 (158-239)||(28225221-28225301)
chr6 (158-239)||(35043890-35043971)
chr6 (158-238)||(2580952-2581032)
chr6 (158-199)||(34712271-34712312)
[»] chr5 (25 HSPs)
chr5 (152-239)||(13661802-13661889)
chr5 (158-239)||(6283562-6283643)
chr5 (158-239)||(10069969-10070050)
chr5 (154-239)||(35132518-35132603)
chr5 (159-239)||(2619662-2619742)
chr5 (156-239)||(19647763-19647846)
chr5 (158-239)||(35504345-35504426)
chr5 (155-239)||(13470148-13470232)
chr5 (147-239)||(34650938-34651029)
chr5 (156-239)||(10054457-10054540)
chr5 (149-239)||(12506287-12506377)
chr5 (156-239)||(8787337-8787420)
chr5 (158-239)||(11958072-11958153)
chr5 (152-239)||(40564509-40564594)
chr5 (156-239)||(4837256-4837338)
chr5 (156-239)||(39069379-39069461)
chr5 (154-239)||(31909628-31909712)
chr5 (191-239)||(21547499-21547547)
chr5 (155-218)||(21944986-21945050)
chr5 (190-237)||(40057339-40057386)
chr5 (165-239)||(11846079-11846153)
chr5 (191-239)||(6284828-6284876)
chr5 (191-239)||(9721712-9721760)
chr5 (191-239)||(19436941-19436989)
chr5 (159-239)||(20175228-20175308)
[»] chr4 (44 HSPs)
chr4 (152-239)||(4089136-4089223)
chr4 (156-239)||(43944505-43944588)
chr4 (151-239)||(16536041-16536129)
chr4 (158-239)||(54897308-54897389)
chr4 (155-239)||(789635-789719)
chr4 (155-239)||(7768935-7769019)
chr4 (155-239)||(15186240-15186324)
chr4 (152-239)||(18067984-18068071)
chr4 (156-239)||(43202488-43202571)
chr4 (165-239)||(50619093-50619167)
chr4 (157-239)||(55882683-55882764)
chr4 (157-238)||(4268928-4269009)
chr4 (158-239)||(24679747-24679827)
chr4 (158-239)||(32217045-32217126)
chr4 (155-239)||(29591186-29591270)
chr4 (148-239)||(52533890-52533981)
chr4 (155-237)||(47231979-47232061)
chr4 (157-239)||(49915158-49915240)
chr4 (158-239)||(4220195-4220276)
chr4 (158-239)||(28755621-28755701)
chr4 (156-237)||(33108780-33108860)
chr4 (151-239)||(42898851-42898939)
chr4 (179-238)||(30154269-30154327)
chr4 (181-239)||(54655981-54656039)
chr4 (181-239)||(54945883-54945941)
chr4 (158-239)||(3783606-3783687)
chr4 (158-239)||(32202585-32202666)
chr4 (191-239)||(37987968-37988016)
chr4 (158-237)||(54054548-54054627)
chr4 (156-238)||(12356242-12356324)
chr4 (155-239)||(6164091-6164174)
chr4 (159-239)||(19503210-19503289)
chr4 (156-239)||(46688310-46688398)
chr4 (191-239)||(53655983-53656031)
chr4 (191-238)||(39843940-39843987)
chr4 (191-238)||(42815142-42815189)
chr4 (157-239)||(50167590-50167670)
chr4 (197-239)||(36395138-36395180)
chr4 (154-239)||(41265455-41265540)
chr4 (191-227)||(52697085-52697121)
chr4 (156-239)||(5091715-5091798)
chr4 (157-199)||(10110147-10110189)
chr4 (191-227)||(1432659-1432695)
chr4 (191-239)||(31680568-31680616)
[»] scaffold0524 (1 HSPs)
scaffold0524 (158-239)||(825-906)
[»] scaffold0045 (2 HSPs)
scaffold0045 (158-239)||(50548-50629)
scaffold0045 (191-239)||(53451-53499)
[»] chr7 (37 HSPs)
chr7 (158-239)||(34606261-34606342)
chr7 (158-238)||(24438477-24438557)
chr7 (155-239)||(29993592-29993676)
chr7 (159-239)||(47656981-47657061)
chr7 (156-239)||(12218541-12218624)
chr7 (156-239)||(18485959-18486042)
chr7 (156-239)||(34333282-34333365)
chr7 (157-239)||(5239284-5239366)
chr7 (156-239)||(24798508-24798590)
chr7 (155-239)||(4628563-4628647)
chr7 (159-239)||(28587911-28587990)
chr7 (179-239)||(30810676-30810736)
chr7 (155-239)||(34546419-34546503)
chr7 (158-237)||(1736980-1737059)
chr7 (156-237)||(5729344-5729425)
chr7 (158-239)||(8754690-8754771)
chr7 (151-239)||(7689305-7689393)
chr7 (165-225)||(28262038-28262098)
chr7 (191-239)||(47083088-47083136)
chr7 (165-239)||(11686429-11686503)
chr7 (157-239)||(27456218-27456299)
chr7 (158-239)||(43594141-43594222)
chr7 (191-239)||(18117176-18117224)
chr7 (191-238)||(4100630-4100677)
chr7 (157-228)||(23357823-23357894)
chr7 (153-227)||(22973593-22973667)
chr7 (157-239)||(47839492-47839573)
chr7 (191-239)||(525180-525228)
chr7 (191-235)||(13064986-13065030)
chr7 (191-239)||(18220543-18220591)
chr7 (191-239)||(23363272-23363320)
chr7 (158-213)||(47118095-47118150)
chr7 (185-239)||(33636479-33636533)
chr7 (167-199)||(19434502-19434534)
chr7 (191-239)||(29835809-29835857)
chr7 (204-236)||(38022600-38022632)
chr7 (191-239)||(45045803-45045851)
[»] scaffold0003 (1 HSPs)
scaffold0003 (152-239)||(53790-53877)
[»] scaffold0264 (1 HSPs)
scaffold0264 (156-239)||(22959-23042)
[»] scaffold0021 (1 HSPs)
scaffold0021 (156-239)||(116202-116285)
[»] scaffold0014 (1 HSPs)
scaffold0014 (156-239)||(68395-68478)
[»] scaffold0188 (1 HSPs)
scaffold0188 (159-239)||(6215-6295)
[»] scaffold0002 (1 HSPs)
scaffold0002 (156-239)||(147010-147093)
[»] scaffold1266 (1 HSPs)
scaffold1266 (157-239)||(292-373)
[»] scaffold0674 (1 HSPs)
scaffold0674 (182-239)||(8002-8059)
[»] scaffold0549 (1 HSPs)
scaffold0549 (182-239)||(7312-7369)
[»] scaffold0190 (1 HSPs)
scaffold0190 (158-239)||(14896-14977)
[»] scaffold0325 (1 HSPs)
scaffold0325 (195-239)||(17575-17619)
[»] scaffold0206 (1 HSPs)
scaffold0206 (191-239)||(11075-11123)
[»] scaffold1152 (1 HSPs)
scaffold1152 (157-239)||(677-759)
[»] scaffold0034 (1 HSPs)
scaffold0034 (156-238)||(95690-95772)
[»] scaffold0050 (1 HSPs)
scaffold0050 (182-227)||(69250-69295)
[»] scaffold0038 (1 HSPs)
scaffold0038 (158-239)||(25719-25799)
[»] scaffold0533 (1 HSPs)
scaffold0533 (191-239)||(5072-5120)


Alignment Details
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 6770197 - 6770418
Alignment:
Q  18 aattcatatttataccgtccaaaaatgcattttcagaaccatgttaaagctcttcacaagcaagggatgaaaattggtatcaattaaataaaagggaaat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6770197 aattcatatttataccgtccaaaaatgcattttcagaaccatgttaaagctcttcacaagcaagggatgaaaattggtatcaattaaataaaagggaaat 6770296  T
Q  118 gatagtttaatttgatattaaagttcgacaataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6770297 gatagtttaatttgatattaaagttcgacaataatttaaagggaatggctaaccggtgcctccggggcactaattaaggatatgaaaaaggaaattatat 6770396  T
Q  218 agtagttaatgtattgaaattg 239  Q
    ||||||||||||||||||||||    
T  6770397 agtagttaatgtattgaaattg 6770418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 29210412 - 29210494
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| ||||||||||||||||||||||||  |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  29210412 agggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 29210494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 38162850 - 38162931
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| | ||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  38162850 gggaaatgttaaccggtgcctccggggcactggttaagggtatgaaaaagaaaattatatagtagttaatgcattgaaattg 38162931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 18043159 - 18043243
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| ||||||||||||||||||||||||  |||||| ||| |||||| |||||||||||||||||||| ||||||||||    
T  18043159 aaagggaaatgctaaccggtgcctccggggcactggttaagggtataaaaaaggaaattatatagtagttaatgcattgaaattg 18043243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 47009990 - 47010074
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| ||||| |||||| ||||| |||||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  47009990 aaagggaaatgctaatcggtgcatccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattg 47010074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 51065937 - 51065853
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| ||||||||||| | ||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  51065937 aaagggaaatgctaaccggtgtccccgggacactggttaaggatatgaaaaagtaaattatatagtagttaatgtattgaaattg 51065853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 29657770 - 29657852
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| ||||||||||||| ||||||||||  |||||||||| |||||| |||||||||||||||||||| ||||||||||    
T  29657770 agggaaatgctaaccggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattg 29657852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 45431278 - 45431359
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| ||||||||||||| || |||| || |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45431278 agggaaatgctaaccggtgcccccagggc-ctgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattg 45431359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 5694321 - 5694402
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||||||||||||||  |||||||||| |||| | |||||||||||||||||||| ||||||||||    
T  5694321 gggaaatgctaaccggtgcctccggggcactggttaaggatataaaaagggaaattatatagtagttaatgcattgaaattg 5694402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 12072254 - 12072167
Alignment:
Q  152 tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||| ||||||||||||| |||||||||   ||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  12072254 tttaaaggaaaatgctaaccggtgcccccggggcaccggttaaggatatgaaaaaggaaattatgtagtagttaatgcattgaaattg 12072167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 30657605 - 30657688
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    ||||||||| ||||||||||||  ||||||||||| ||||| ||||||||||  |||||||||||||||||||| |||||||||    
T  30657605 aaagggaaatgctaaccggtgctcccggggcactagttaagcatatgaaaaaagaaattatatagtagttaatgcattgaaatt 30657688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 42770178 - 42770095
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||| ||||||||||  |||| | |||||||||| |||||||||||||||||||| ||||||||||    
T  42770178 aagggaaatgctaaccggtgcccccggggcactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 42770095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 47532857 - 47532775
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||| |||||| | |||  |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  47532857 aagggaaatgctaaccggtgtctccggagtactg-ttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattg 47532775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 17333467 - 17333387
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||| ||||| ||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  17333467 gggaaatgctaaccggtgcccccggg-cactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 17333387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 24178649 - 24178568
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||||| |||| ||||||||||  ||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  24178649 gggaaatgctaaccgatgcccccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattg 24178568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 51368975 - 51368890
Alignment:
Q  154 taaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||||| |||||||||| ||||| ||| |||  |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  51368975 taaagggaaatgctaaccggtacctccagggtactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 51368890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 15227737 - 15227820
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| |||||||||| || | ||||||||  ||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  15227737 aagggaaatgctaaccggtaccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattg 15227820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 13961211 - 13961292
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| ||||||||||||| |||||||||   |||||||||| ||||| ||||||||||||||||||||| ||||||||||    
T  13961211 agggaaatgctaaccggtgcccccggggcacgggttaaggatataaaaaa-aaaattatatagtagttaatgcattgaaattg 13961292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 12306914 - 12306998
Alignment:
Q  154 taaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||||| ||||||||||||||| ||||| ||| |||| |||| ||||||||||||||||| |||||||||  ||||||||||    
T  12306914 taaagggaaatgctaaccggtgcctctggggctctagttaatgatacgaaaaagaaaattatat-gtagttaatacattgaaattg 12306998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 15282667 - 15282619
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15282667 ttaaggatatgaaaaagaaaattatatagtagttaatatattgaaattg 15282619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 9266916 - 9266833
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| | ||||||||| | ||| ||||||  ||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  9266916 aagggaaatgttaaccggtgtccccgcggcactggttaaggatatgaaaaaggaaattatatagtatttaatgcattgaaattg 9266833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 19032002 - 19031920
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| ||||||||||||  | |||||| || ||||||||||||||||| ||||||||||||||||||   ||||||||||    
T  19032002 agggaaatgctaaccggtgctccgggggcattagttaaggatatgaaaaaggaaattatatagtagttaaaacattgaaattg 19031920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 29683193 - 29683275
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaa-gaaaattatatagtagttaatgtattgaaat 237  Q
    |||||||| ||||||||||||| ||||||||||  |||| ||||| ||||| | |||||||||||||||||||| ||||||||    
T  29683193 aagggaaatgctaaccggtgcccccggggcactggttaaagatataaaaaaaggaaattatatagtagttaatgcattgaaat 29683275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 38702117 - 38702039
Alignment:
Q  160 gaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    |||| ||||||||||||  ||||||||||  |||||| |||||||||| ||| |||||||||||||||| |||||||||    
T  38702117 gaaatgctaaccggtgctcccggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaatt 38702039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 3784899 - 3784818
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| || || ||||||| || | |||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  3784899 gggaaatgcaaatcggtgcccccagtgcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 3784818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 30294567 - 30294486
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||| ||||| | |||| ||| |  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  30294567 gggaaatgctaatcggtgtccccggagcattggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 30294486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 39497339 - 39497387
Alignment:
Q  190 attaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  39497339 attaaggatatgaaaaagaaaattatatagtagttaatgcattaaaatt 39497387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 48383290 - 48383218
Alignment:
Q  165 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaat 237  Q
    ||||||||||||  ||||||||||  |||||||| ||||||||||||||||||   |||||||||||||||||    
T  48383290 gctaaccggtgctcccggggcactggttaaggatgtgaaaaagaaaattatatgaaagttaatgtattgaaat 48383218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 50128325 - 50128277
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  50128325 ttaaggatatgaaaaagaaaattacatagtagttaatgcattgaaattg 50128277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 3097692 - 3097739
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||    
T  3097692 ttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaatt 3097739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 238
Target Start/End: Complemental strand, 10976099 - 10976008
Alignment:
Q  147 aataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    ||||||| ||| ||||| |||| |||||| ||| | ||||||  ||||||||||||||||| | |||||||||||||||||| ||| |||||    
T  10976099 aataattaaaaaggaaatgctagccggtgtctctgaggcacttgttaaggatatgaaaaaggagattatatagtagttaatgcattaaaatt 10976008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 14350465 - 14350382
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||| |||| ||||   |||||| |||||||||| ||||||||| |||||||||| ||| ||||||    
T  14350465 aagggaaatgctaaccggtgcccccggagcaccggttaagggtatgaaaaaggaaattatattgtagttaatgcattaaaattg 14350382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 35985808 - 35985726
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| | ||||||||||| ||||  ||||  |||||||||| |||||| |||||||||||||||||||| ||||||||||    
T  35985808 aagggaaatgttaaccggtgcc-ccggatcactgtttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattg 35985726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 48071482 - 48071563
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| |||||||| ||| ||||||| |||  ||||||||||| ||||| |||||||||| ||||||||| ||||||||||    
T  48071482 agggaaatgctaaccgatgc-tccggggtactggttaaggatatgtaaaaggaaattatataatagttaatgcattgaaattg 48071563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 19011180 - 19011112
Alignment:
Q  159 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatg 228  Q
    ||||| ||||||||||| | |||||||||   ||||||||||||||||| ||||||||||||||||||||    
T  19011180 ggaaatgctaaccggtgtc-ccggggcacgggttaaggatatgaaaaaggaaattatatagtagttaatg 19011112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 23473617 - 23473569
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||||||| | ||||||||| |||||||||||||||||||    
T  23473617 ttaaggatatgaaaaaggagattatatagcagttaatgtattgaaattg 23473569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 39912468 - 39912384
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| | ||||||| ||   ||||||||| ||||||||||| |||| | |||||||||| ||||||||| ||||||||||    
T  39912468 aaagggaaatgttaaccggcgcactcggggcactgattaaggatataaaaagggaaattatatactagttaatgcattgaaattg 39912384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 52749635 - 52749683
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  52749635 ttaaagatatgaaaaaggaaattatataatagttaatgtattgaaattg 52749683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 43286755 - 43286802
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  43286755 ttaaggatatgaaaaaggaaattatataatagttaatgttttgaaatt 43286802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 36446501 - 36446430
Alignment:
Q  167 taaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| |||||| ||| ||||||  ||||| |||| |||||| |||||||||||||||||||| ||||||||||    
T  36446501 taactggtgcccccgaggcactggttaagaatat-aaaaaggaaattatatagtagttaatgcattgaaattg 36446430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 28481844 - 28481907
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 221  Q
    |||||| |||||||||||||||  |||| ||  ||||||||||||||||| |||||||| ||||    
T  28481844 gggaaatgctaaccggtgcctcttgggccctggttaaggatatgaaaaaggaaattatacagta 28481907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 28726094 - 28726032
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggat-atgaaaaagaaaattatat 217  Q
    |||||||| ||||||||||||| ||||||||||  |||||||| || |||||| |||||||||    
T  28726094 aagggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaaggaaattatat 28726032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 45449397 - 45449351
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaat 237  Q
    |||| ||||| ||||||||||||||||||||||||||| ||| ||||    
T  45449397 ttaaagatataaaaaagaaaattatatagtagttaatgcattaaaat 45449351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 38335170 - 38335250
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||| ||  ||| ||||  |||| |||||||||||| ||||||||||||| |||||| |||| |||||    
T  38335170 gggaaatgctaaccggtgtctt-gggacactggttaaagatatgaaaaaggaaattatatagtaattaatgcattgtaattg 38335250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 52431625 - 52431662
Alignment:
Q  202 aaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  52431625 aaaaaaaaaattatatagtagttaatgcattgaaattg 52431662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 9414062 - 9413987
Alignment:
Q  160 gaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaa 236  Q
    |||| ||||||||||||| |||||||| |  |||| ||||| ||||||||||||||| |||| ||| || |||||||    
T  9414062 gaaatgctaaccggtgcc-ccggggcattggttaaagatattaaaaagaaaattatacagtaattattgaattgaaa 9413987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 37315409 - 37315373
Alignment:
Q  202 aaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    |||||| |||||||||||||||||||| |||||||||    
T  37315409 aaaaaggaaattatatagtagttaatgcattgaaatt 37315373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 31390010 - 31390092
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31390010 aagggaaatgctaactggtgcctccggggcactagttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaatt 31390092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 561707 - 561623
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| ||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  561707 aaagggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 561623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 30486208 - 30486291
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| |||||| |||||| ||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30486208 aagggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattg 30486291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 32361056 - 32360976
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaat 237  Q
    ||||||| ||||||||||||| ||||||||||  |||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  32361056 agggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagttaatgcattgaaat 32360976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 34442719 - 34442637
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||| |||||||||   ||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  34442719 aagggaaatgctaaccggtgcc-ccggggcacatgttaaggatatgaaaaagaagattatatagtagttaatgcattgaaattg 34442637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 26891850 - 26891768
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| ||||||||||||| ||||| |||| ||||||||||| |||||| |||||||||| ||||||||| ||||||||||    
T  26891850 agggaaatgctaaccggtgcccccgggacactgattaaggatataaaaaaggaaattatatattagttaatgcattgaaattg 26891768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 20552931 - 20553012
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||| | ||||||||  ||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  20552931 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattg 20553012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 22887749 - 22887830
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    ||||||| |||||||| ||||||||||||| |  ||||||||||||||||  |||||||||||||||||||| |||||||||    
T  22887749 agggaaatgctaaccgatgcctccggggcagtggttaaggatatgaaaaaagaaattatatagtagttaatgcattgaaatt 22887830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 31438646 - 31438727
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||  ||||||||||  ||||||||||||||||| |||||||| ||||||||||| ||||||||||    
T  31438646 gggaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaaggaaattatacagtagttaatgcattgaaattg 31438727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 8969591 - 8969514
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaat 237  Q
    |||||| ||||||| ||||| |  |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  8969591 gggaaatgctaaccagtgcccc--gggcactagttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaat 8969514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 26387252 - 26387169
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| |||||| ||||||||||  | |||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  26387252 aagggaaatgctaactggtgcctccgaagtacttgttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 26387169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 2898067 - 2898152
Alignment:
Q  153 ttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||| | ||||||||| | ||||  ||||  |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2898067 ttaaagggaaatgttaaccggtgtc-ccggaacactggttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattg 2898152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 4381802 - 4381876
Alignment:
Q  165 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||| |||| |||||  |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  4381802 gctaaccggtgcccccggtgcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 4381876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 44587902 - 44587983
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||| |||||||||   |||||||||| |||||| |||||||||||||||||||  ||||||||||    
T  44587902 gggaaatgctaaccggtgcccccggggcaccggttaaggatataaaaaaggaaattatatagtagttaatacattgaaattg 44587983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 27856584 - 27856501
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| | ||||||||||| ||||||||||  |||||  |||||||||| |||||||||| ||||||||| ||||||||||    
T  27856584 aagggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagttaatgcattgaaattg 27856501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 38591062 - 38590979
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||| | | ||||||||  ||||| ||||||||||| |||||||| ||||||||||||||| ||||||    
T  38591062 aagggaaatgctaaccggtgtccctggggcactggttaagaatatgaaaaaggaaattatacagtagttaatgtattaaaattg 38590979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 6580188 - 6580269
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    ||||||| ||||||| ||||| | ||||||||  |||||| |||||||||| ||| |||||||||||||||| |||||||||    
T  6580188 agggaaatgctaaccagtgccccgggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaatt 6580269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 43637165 - 43637245
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||| ||| | ||||  ||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  43637165 gggaaatgctaaccggtgcc-ccgagacactggttaaggatatgaataaggaaattatatagtagttaatgcattgaaattg 43637245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 22567635 - 22567683
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  22567635 ttaaggatatgaaaaaagaaattatatagtagttaatgtattgaaattg 22567683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 22068507 - 22068425
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||  ||||| ||||||||||  |||||||||||||||||  ||||||||||||||| ||| ||||||||||    
T  22068507 aagggaaatgctaacaagtgcccccggggcactggttaaggatatgaaaaagggaattatatagtagtt-atgcattgaaattg 22068425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 32860100 - 32860183
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| | ||||||||||| | |||||||   |||||||||| |||||| ||||||||||||| |||||| ||||||||||    
T  32860100 aagggaaatgttaaccggtgccccgggggcacgggttaaggatataaaaaaggaaattatatagtatttaatgcattgaaattg 32860183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 11021411 - 11021327
Alignment:
Q  154 taaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||||| | |||| |||||||| || ||||| ||||| |||||||||||  ||||||||| |||||||||| ||||||||||    
T  11021411 taaagggaaatgttaactggtgcctc-ggagcactgattaaagatatgaaaaaagaaattatatggtagttaatgcattgaaattg 11021327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 38296178 - 38296258
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||| ||  ||||||||  |||| |||||||||||||||||||||||||| |||||  ||||||||||    
T  38296178 gggaaatgctaaccggtgtctt-ggggcactggttaaagatatgaaaaagaaaattatatagtaattaatacattgaaattg 38296258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 5093699 - 5093644
Alignment:
Q  184 gcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||| ||| ||||||    
T  5093699 gcactagttaaggatatgaaaaaggaaattaaatagtagttaatgcattaaaattg 5093644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 3668291 - 3668218
Alignment:
Q  165 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||| ||||  ||||  |||||| |||| ||||| |||||||||||||||||||| ||||||||||    
T  3668291 gctaaccggtgcccccgga-cactggttaagggtatggaaaaggaaattatatagtagttaatgcattgaaattg 3668218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 4022666 - 4022585
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    |||||||| |||||| ||||||  ||||  ||| |||||| ||||||||||  |||||| |||||||||||||||||||||||    
T  4022666 aagggaaatgctaactggtgcccacgggatactgattaagaatatgaaaaaagaaatta-atagtagttaatgtattgaaatt 4022585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 1859161 - 1859242
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    ||||||| |||||| |||||| |||||| | |  |||||||||| |||||  ||||| |||||||||||||| |||||||||    
T  1859161 agggaaatgctaactggtgcccccggggtaatggttaaggatataaaaaaagaaattgtatagtagttaatgcattgaaatt 1859242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 5881250 - 5881287
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatg 228  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  5881250 ttaaggatatgaaaaaggaaattatatagtagttaatg 5881287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 15079100 - 15079063
Alignment:
Q  202 aaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||||||||||||||||||||||||||||    
T  15079100 aaaaaggaaattatatagtagttaatgtattgaaattg 15079063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 16807409 - 16807332
Alignment:
Q  160 gaaaggctaaccggtgcctccggggcactaattaaggatatg-aaaaagaaaattatatagtagttaatgtattgaaa 236  Q
    |||| ||||||||||||||||| |||| |  |||||||| |  |||||||||||||||||||||||| || |||||||    
T  16807409 gaaatgctaaccggtgcctccgaggcattggttaaggatgtttaaaaagaaaattatatagtagttattgcattgaaa 16807332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 16846690 - 16846613
Alignment:
Q  160 gaaaggctaaccggtgcctccggggcactaattaaggatatg-aaaaagaaaattatatagtagttaatgtattgaaa 236  Q
    |||| ||||||||||||||||| |||| |  |||||||| |  |||||||||||||||||||||||| || |||||||    
T  16846690 gaaatgctaaccggtgcctccgaggcattggttaaggatgtttaaaaagaaaattatatagtagttattgcattgaaa 16846613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 27584771 - 27584819
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||||| | |||||||||||||||||| | ||||||||||    
T  27584771 ttaaggatatgaaaagggaaattatatagtagttaaagcattgaaattg 27584819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 35851966 - 35851925
Alignment:
Q  147 aataatttaaagggaaaggctaaccggtgcctccggggcact 188  Q
    |||||||| |||||||| ||||||||||||| ||||||||||    
T  35851966 aataattttaagggaaatgctaaccggtgcccccggggcact 35851925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 39531868 - 39531905
Alignment:
Q  202 aaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  39531868 aaaaaggaaattatatagtagttaatgcattgaaattg 39531905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 13574182 - 13574134
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||||||| ||| ||||||  | |||||||||||||||||    
T  13574182 ttaaggatatgaaaaaggaaaatatataaaaattaatgtattgaaattg 13574134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 168463 - 168547
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| ||||||||||||||||||||||||  |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  168463 aaagggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 168547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 27988687 - 27988604
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  27988687 aagggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattg 27988604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 28045989 - 28045906
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  28045989 aagggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattg 28045906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 43119216 - 43119298
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| |||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  43119216 agggaaatgctaaccggtgccctcggggcactgattaaagatatgaaaaagaaaattatatagtagttaatgcattgaaattg 43119298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 13643005 - 13643092
Alignment:
Q  151 atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    ||||||||| ||| ||||||||||||| ||||||||||  ||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  13643005 atttaaaggaaaatgctaaccggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagttaatgcattgaaatt 13643092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 13743430 - 13743517
Alignment:
Q  151 atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    ||||||||| ||| ||||||||||||| ||||||||||  ||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  13743430 atttaaaggaaaatgctaaccggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagttaatgcattgaaatt 13743517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 4537932 - 4537850
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| ||| || |||||||||||||||||||| |||||||||    
T  4537932 aagggaaatgctaaccggtgcctccggggcactggttaaggatataaaataggaaattatatagtagttaatgcattgaaatt 4537850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 30675758 - 30675677
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  30675758 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 30675677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 4648193 - 4648275
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||| | |||||||||| |||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  4648193 aagggaaatgctaaccggtgtc-ccggggcactgattaaggatatgaaaaaggaaattatatagtagttaatacattgaaattg 4648275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 16394247 - 16394168
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaat 237  Q
    |||||| ||||||||||||| ||||||||||  |||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  16394247 gggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagttaatgcattgaaat 16394168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 16785077 - 16785167
Alignment:
Q  148 ataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| |||||||| |||||||||||| ||| |||||||  ||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  16785077 ataattttaagggaaatgctaaccggtgc-tccagggcactggttaaggatatgaaaaaagaaattatatagcagttaatgtattgaaattg 16785167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 33357317 - 33357234
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| |||||| |||||| |||| |||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  33357317 aagggaaatgctaactggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 33357234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 11112638 - 11112720
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| |||||| ||||| |||||| ||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  11112638 agggaaatgctaactggtgcatccgggacactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 11112720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 20831737 - 20831660
Alignment:
Q  160 gaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaat 237  Q
    |||| ||||||||||||| ||||| ||||  ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  20831737 gaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaat 20831660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 34228682 - 34228763
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||| | ||||||||  ||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  34228682 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattg 34228763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 29444317 - 29444245
Alignment:
Q  167 taaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||  |||||||||| |||||||||||||||||| |||||||||||||||||| | ||||||||||    
T  29444317 taaccggtgctcccggggcactgattaaggatatgaaaaaggaaattatatagtagttaacgcattgaaattg 29444245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 42035154 - 42035086
Alignment:
Q  171 cggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| |||| |||||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42035154 cggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattg 42035086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 9063239 - 9063159
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaat 237  Q
    |||||||| ||||||||||| | |||| |||||  ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  9063239 aagggaaatgctaaccggtgtc-ccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaat 9063159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 12652630 - 12652707
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaa 235  Q
    |||||| ||||||||||||| | || |||||  ||||||||||||||||| |||||||||||||||||||| ||||||    
T  12652630 gggaaatgctaaccggtgcccctggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaa 12652707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 7304671 - 7304623
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7304671 ttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattg 7304623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 10618016 - 10618088
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatg 228  Q
    |||| ||| |||||||||||||||  ||||||   ||||||||||||||||||||||||||||||||||||||    
T  10618016 aaggaaaatgctaaccggtgcctctagggcacaggttaaggatatgaaaaagaaaattatatagtagttaatg 10618088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 16888728 - 16888649
Alignment:
Q  159 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| ||||||||||||| ||||| |||   ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  16888728 ggaaatgctaaccggtgcccccggg-cacaggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 16888649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 9278210 - 9278293
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| |||||| |||||||| ||| ||||  |||| |||||||||||| |||||||||| ||||||||| ||||||||||    
T  9278210 aagggaaatgctaactggtgcctcagggacactcgttaaagatatgaaaaaggaaattatataatagttaatgcattgaaattg 9278293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 16890643 - 16890585
Alignment:
Q  181 ggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  16890643 ggggcaccagttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 16890585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 32113915 - 32113989
Alignment:
Q  165 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||| |||||| | | |  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  32113915 gctaaccggtgtctccggagtattggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 32113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 36730471 - 36730525
Alignment:
Q  185 cactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  36730471 cactagttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 36730525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 2805446 - 2805365
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| | ||||| ||||| ||||| ||||  ||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  2805446 gggaaatgttaaccagtgcccccgggacactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattg 2805365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 37373206 - 37373286
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||| ||||  ||||  ||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  37373206 gggaaatgctaaccggtgcccccgga-cactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattg 37373286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 21595848 - 21595927
Alignment:
Q  159 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| ||||||||||||| ||||| ||||  |||||| |||||||||| ||||||||||| |||||||| ||||||||||    
T  21595848 ggaaatgctaaccggtgcccccggg-cactggttaagggtatgaaaaaggaaattatataggagttaatgcattgaaattg 21595927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 28626801 - 28626849
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||    
T  28626801 ttaaggatgtgaaaaaggaaattatatagtagttaatgtattgaaattg 28626849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 40831310 - 40831358
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  40831310 ttaaagatatgaaaaagaaaattatatagtagttaatgcattgaaattg 40831358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 36923841 - 36923782
Alignment:
Q  166 ctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 225  Q
    ||||||| |||||||| |||||| |||||||||||||||||| |||||||||| ||||||    
T  36923841 ctaaccgctgcctccgaggcactgattaaggatatgaaaaaggaaattatataatagtta 36923782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 9254066 - 9254006
Alignment:
Q  179 ccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||  ||||||||||||||||  ||||| |||||||||||||| ||||||||||    
T  9254066 ccggggcactggttaaggatatgaaaaatgaaattttatagtagttaatgcattgaaattg 9254006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 9537977 - 9537929
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  9537977 ttaaggatatgaaaaaggaaattatatagtagttaatgcattaaaattg 9537929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 3930419 - 3930342
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaa 235  Q
    ||||||| ||||| ||||||| ||||| ||||| ||||  |||||||| || |||||||||||||||||||| ||||||    
T  3930419 agggaaatgctaatcggtgcccccggg-cactagttaataatatgaaagaggaaattatatagtagttaatgcattgaa 3930342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 12203854 - 12203935
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| ||||||||||||| |||||  ||   |||||| |||||||||  |||||||||||||||||||| ||||||||||    
T  12203854 agggaaatgctaaccggtgcccccgggt-accggttaagggtatgaaaaaagaaattatatagtagttaatgcattgaaattg 12203935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 12448282 - 12448363
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| ||||||||||||| |||||  ||   |||||| |||||||||  |||||||||||||||||||| ||||||||||    
T  12448282 agggaaatgctaaccggtgcccccgggt-accggttaagggtatgaaaaaagaaattatatagtagttaatgcattgaaattg 12448363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 34192809 - 34192856
Alignment:
Q  192 taaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| ||||||||||| |||||||||| ||||||||| ||||||||||    
T  34192809 taagaatatgaaaaaggaaattatatactagttaatgcattgaaattg 34192856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 29235235 - 29235305
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatg 228  Q
    |||||| |||||||||||   |||| ||| | ||||||||||| |||||  ||||||||||||||||||||    
T  29235235 gggaaatgctaaccggtgttcccggagcattgattaaggatataaaaaaagaaattatatagtagttaatg 29235305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 39751658 - 39751597
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggat-atgaaaaagaaaattatata 218  Q
    |||||| ||||||||||||| ||||||||||  |||||||| || |||| ||||||||||||    
T  39751658 gggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaggaaaattatata 39751597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 10870385 - 10870433
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| ||||| ||||||||||||||||| ||||||||  ||||||||||    
T  10870385 ttaatgatataaaaaagaaaattatataatagttaatacattgaaattg 10870433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 18014669 - 18014753
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| |||||| |||||| |||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  18014669 aaagggaaatgctaactggtgcccccggggcactgattaaggatatgaaaaagtaaattatatagtagttaatgcattgaaattg 18014753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 272219 - 272301
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| ||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  272219 agggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 272301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 4168183 - 4168264
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||||||||||||||||| |||  |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  4168183 gggaaatgctaaccggtgcctccggggaactggttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattg 4168264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 52520677 - 52520762
Alignment:
Q  154 taaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  52520677 taaagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 52520762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 46352631 - 46352715
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| ||||||||||||| ||||||||||  ||||||||||||||||| |||||||| ||||||||||| ||||||||||    
T  46352631 aaagggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatacagtagttaatgcattgaaattg 46352715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 40362768 - 40362685
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||| |||||||||||||||| |||||||||||||||||  |||||||||||||||||||| ||| ||||||    
T  40362768 aagggaaatgctaacccgtgcctccggggcactgattaaggatatgaaaaaagaaattatatagtagttaatgcattaaaattg 40362685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 41304004 - 41304086
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| |||||||||||||||||||||| |  ||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  41304004 agggaaatgctaaccggtgcctccggggcagtggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattg 41304086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 49893330 - 49893412
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| ||||||||||||| ||||||||||  ||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  49893330 agggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattg 49893412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 39074419 - 39074500
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  39074419 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 39074500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 43786871 - 43786952
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||||||||||||||  |||| | |||||||||| |||||||||||||||||||| ||||||||||    
T  43786871 gggaaatgctaaccggtgcctccggggcactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 43786952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 858587 - 858670
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| || |||||||||| || | |||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  858587 aagggaaatgcaaaccggtgcccccagtgcactagttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 858670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 20923992 - 20924073
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||||||||| |||||||||||  |||||| |||||||||| |||||||||||||||||||  ||||||||||    
T  20923992 gggaaatgctaaccggtgcttccggggcactggttaagggtatgaaaaaggaaattatatagtagttaattcattgaaattg 20924073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 48725271 - 48725352
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||| | ||||||||  ||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  48725271 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattg 48725352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 52246582 - 52246663
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||| |||||||||||||||||  ||||||||||||||||  |||||||||||| ||||||| ||||||||||    
T  52246582 gggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaatgaaattatatagttgttaatgcattgaaattg 52246663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 11308398 - 11308317
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaat 237  Q
    |||||||| |||||||||||  |||||| |||| ||||||||| |||||||| |||||||||| ||||||||| ||||||||    
T  11308398 aagggaaatgctaaccggtgtttccgggacactgattaaggatgtgaaaaaggaaattatataatagttaatgcattgaaat 11308317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 22248910 - 22248967
Alignment:
Q  182 gggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  22248910 gggcactagttaaggatatgaaaaaggaaattatatagtagttattgtattgaaattg 22248967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 51819061 - 51818981
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    |||||| |||||| | |||||| |||||||| ||||||||||  |||||||||||||| ||||||||| ||||||||||||    
T  51819061 gggaaatgctaactgatgcctctggggcactgattaaggatactaaaaagaaaattatttagtagttattgtattgaaatt 51818981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 13159895 - 13159978
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||  | ||||  ||| ||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  13159895 aagggaaatgctaaccggtgctcctggggttctagttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattg 13159978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 41554118 - 41554045
Alignment:
Q  165 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||| |||| |||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  41554118 gctaactggtgcc-ccggtgcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 41554045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 50395741 - 50395667
Alignment:
Q  165 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||| ||||| ||||  ||| |||||||||||||||||||||| ||||||||||| || |||||||    
T  50395741 gctaaccggtgcccccgggacactggttagggatatgaaaaagaaaattatacagtagttaatgcatagaaattg 50395667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 42964426 - 42964354
Alignment:
Q  167 taaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| ||||| |||||||||||  ||||||||||||||||  ||||| |||||||||||||| ||||||||||    
T  42964426 taactggtgcttccggggcactggttaaggatatgaaaaatgaaattttatagtagttaatgcattgaaattg 42964354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 49529434 - 49529372
Alignment:
Q  179 ccggggcactaattaaggatatgaaaaagaaaattata---tagtagttaatgtattgaaatt 238  Q
    |||||||||| |||||||||||||||||||||||||||   |||||||||||| |||||||||    
T  49529434 ccggggcactgattaaggatatgaaaaagaaaattatatactagtagttaatgcattgaaatt 49529372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 43269916 - 43269845
Alignment:
Q  167 taaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    |||||||||||| ||| |||||  ||||||||||||||| | |||||| ||||||||||||| |||||||||    
T  43269916 taaccggtgccttcggagcactggttaaggatatgaaaagggaaattacatagtagttaatgcattgaaatt 43269845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 53490019 - 53489929
Alignment:
Q  151 atttaaagggaaaggctaaccggtgcctcc--ggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||| ||||| ||||||| ||  ||||||||  |||||| |||||||||| |||||||||||||||||||| ||| ||||||    
T  53490019 atttaatgggaaatgctaatcggtgcccccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattg 53489929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 2391630 - 2391688
Alignment:
Q  181 ggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||  ||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  2391630 ggggcactggttaaggataagaaaaaggaaattatatagtagttaatgcattgaaattg 2391688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 2393391 - 2393449
Alignment:
Q  181 ggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||  ||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  2393391 ggggcactggttaaggataagaaaaaggaaattatatagtagttaatgcattgaaattg 2393449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 2119431 - 2119512
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| | ||||||||| |  || ||||||  |||| |||||||||||| |||||||||||||||||||| ||||||||||    
T  2119431 gggaaatgttaaccggtgtcctcgaggcactggttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattg 2119512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 10617469 - 10617389
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| | ||||||||||| ||||  |||| ||||||||||| |||||| |||||||||||||||||||| ||| ||||||    
T  10617469 gggaaatgttaaccggtgcccccgga-cactgattaaggatataaaaaaggaaattatatagtagttaatgcattaaaattg 10617389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 29241660 - 29241717
Alignment:
Q  181 ggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    ||||||| | ||||||||||||||| | |||||||||||||||||||| |||||||||    
T  29241660 ggggcaccagttaaggatatgaaaatggaaattatatagtagttaatgcattgaaatt 29241717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 7468444 - 7468492
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  7468444 ttaaggaaatgaaaaaggaaattatatagtagttaatgcattgaaattg 7468492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 31514829 - 31514872
Alignment:
Q  196 gatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||    
T  31514829 gatatgaaaaataaaattatatagtagttaatgtattaaaattg 31514872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 50359364 - 50359291
Alignment:
Q  165 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||| ||| ||||||  |||||| || |||||| ||||||||||||||||||||| ||||||||||    
T  50359364 gctaactggtgcc-ccgtggcactggttaaggttaagaaaaaaaaaattatatagtagttaatgcattgaaattg 50359291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 28139309 - 28139390
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||| |||||| ||  | ||||  ||||||||||||||||  |||||| ||||||||||||| ||||||||||    
T  28139309 gggaaatgctaactggtgcccccaagacactggttaaggatatgaaaaaagaaattaaatagtagttaatgcattgaaattg 28139390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 2505382 - 2505430
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| |||||||||||| ||||||||||||||||| || ||||||||||    
T  2505382 ttaaagatatgaaaaaggaaattatatagtagttagtgcattgaaattg 2505430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 2938193 - 2938145
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| ||||| ||||||||||||||||||||||||||| | ||||||||    
T  2938193 ttaaagatataaaaaagaaaattatatagtagttaatgcactgaaattg 2938145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 42548096 - 42548175
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    |||||| |||| ||| |||||| | ||||||  |||| |||||||||||  |||||||||||||||||||| |||||||||    
T  42548096 gggaaatgctagccgatgcctc-gaggcactgcttaaagatatgaaaaaagaaattatatagtagttaatgcattgaaatt 42548175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 52718200 - 52718236
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaat 227  Q
    ||||||||||||||||| |||||||||||||||||||    
T  52718200 ttaaggatatgaaaaaggaaattatatagtagttaat 52718236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 50299099 - 50299050
Alignment:
Q  190 attaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| ||||| |||| |||||||||||||||||||||| | ||||||||    
T  50299099 attaaagatataaaaaggaaaattatatagtagttaatgcactgaaattg 50299050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 2362801 - 2362861
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatata 218  Q
    |||||| ||||||||||||  |||| ||| |  ||||||||||||||||| ||||||||||    
T  2362801 gggaaatgctaaccggtgctcccggtgcaatggttaaggatatgaaaaaggaaattatata 2362861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 12525706 - 12525797
Alignment:
Q  145 acaataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaa 236  Q
    ||||||||||||||||||| |||||||||||||||||||| |||  |||||| |||||||||| |||||||||||||||||||  |||||||    
T  12525706 acaataatttaaagggaaatgctaaccggtgcctccggggtactggttaagggtatgaaaaaggaaattatatagtagttaatacattgaaa 12525797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 23629761 - 23629681
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| | |||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23629761 gggaaatgttaaccgatgcc-ccggggcactgattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 23629681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 3515759 - 3515847
Alignment:
Q  151 atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||| ||||||||||||| || |||||||  |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  3515759 atttaaagggaaatgctaaccggtgcccccagggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 3515847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 1391365 - 1391283
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| |||||||||||| ||||||| ||| |||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  1391365 aagggaaatgctaaccggtgc-tccggggtactgattaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 1391283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 2350654 - 2350733
Alignment:
Q  160 gaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| ||||||||||||  ||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2350654 gaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattg 2350733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 20897946 - 20898029
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||| || |||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  20897946 aagggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 20898029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 23402136 - 23402219
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| |||||| |||||||||||||||||  ||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  23402136 aagggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattg 23402219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 392096 - 392177
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  392096 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 392177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 21878533 - 21878453
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    |||||| |||||||||||||||| ||||||   ||||||||||||||||| |||||||||||||||||||| |||||||||    
T  21878533 gggaaatgctaaccggtgcctcccgggcacgggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaatt 21878453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 29978233 - 29978312
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    |||||| ||||||||||||||||||  ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  29978233 gggaaatgctaaccggtgcctccgga-cactagttaaggatatgaaaaaggaaattatatagtatttaatgtattgaaatt 29978312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 7851347 - 7851264
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||| || |||||||  ||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  7851347 aagggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaagaaaattatatagtaattaatgcattaaaattg 7851264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 27433486 - 27433573
Alignment:
Q  152 tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| ||||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||||||| ||| ||||||    
T  27433486 tttatagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattg 27433573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 12145303 - 12145222
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||| || | |||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  12145303 gggaaatgctaaccggtgcccccagtgcacttgttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 12145222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 34396715 - 34396632
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||| || || |||   ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  34396715 aagggaaatgctaaccggtgcccccaggacacaggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 34396632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 13529454 - 13529536
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| ||||||  |||||| |||||||||  |||||||| |||||||| |||||||||||||||||||| ||||||||||    
T  13529454 agggaaatgctaacttgtgccttcggggcactggttaaggatgtgaaaaaggaaattatatagtagttaatgcattgaaattg 13529536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 29451301 - 29451220
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| |||||| |||||||||||| |||   ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  29451301 agggaaatgctaactggtgcctccggg-caccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 29451220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 32929699 - 32929613
Alignment:
Q  153 ttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||| ||||||||||||| |||||||| |  |||||| |||||||||| |||||||||| || |||||| ||||||||||    
T  32929699 ttaaagggaaatgctaaccggtgcccccggggcaatggttaagggtatgaaaaaggaaattatatattaattaatgcattgaaattg 32929613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 13417124 - 13417067
Alignment:
Q  182 gggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  13417124 gggcactagttaaggatatgaaaaaggaaattatatattagttaatgtattgaaattg 13417067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 4215693 - 4215776
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| | ||||||||||| ||||||||||  |||||  |||||||||| |||||||||| ||||||||| ||||||||||    
T  4215693 aagggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagttaatgcattgaaattg 4215776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 32985369 - 32985298
Alignment:
Q  168 aaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||  ||||||| |  |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  32985369 aaccggtgccctcggggcattggttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattg 32985298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 31280320 - 31280402
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| ||||||||||||  ||| |||||| ||||||   ||||||||| |||||||||||||||||||| ||||||||||    
T  31280320 agggaaatgctaaccggtgctcccgaggcactgattaagagaatgaaaaaggaaattatatagtagttaatgcattgaaattg 31280402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 34477712 - 34477655
Alignment:
Q  182 gggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  34477712 gggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 34477655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 18276803 - 18276724
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaa 235  Q
    ||||||||| | |||| |||||| || |||||||  ||||||||||||||||| |||||||||||||||||||| ||||||    
T  18276803 aaagggaaatgttaactggtgcc-cctgggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaa 18276724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 26467277 - 26467229
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  26467277 ttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 26467229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 14559920 - 14559992
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatg 228  Q
    |||||||| |||||||||||||| ||||| ||| ||||| |||||||||||  ||| |||||| |||||||||    
T  14559920 aagggaaatgctaaccggtgccttcggggaactgattaaagatatgaaaaaagaaaatatataatagttaatg 14559992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 25165566 - 25165518
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  25165566 ttaaggatatgaaaaaagaaattatatagtagttaatatattgaaattg 25165518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 34852002 - 34851954
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| |||||||||||| |||||||||||||||||||| ||||||||||    
T  34852002 ttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattg 34851954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 3026198 - 3026114
Alignment:
Q  153 ttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||| |||||| |||||| |  |||||||  |||||| |||||||||  |||||||| ||||||||||| ||||||||||    
T  3026198 ttaaagggaaatgctaactggtgcccc--gggcactggttaagggtatgaaaaatgaaattatacagtagttaatgcattgaaattg 3026114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 9660988 - 9661067
Alignment:
Q  160 gaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| |||||||||||||  || ||||| | ||||||||||||||||  |||||| ||| ||||||||| ||||||||||    
T  9660988 gaaatgctaaccggtgccctcgtggcaccagttaaggatatgaaaaaagaaattacataatagttaatgcattgaaattg 9661067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 28225221 - 28225301
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||| |||||||| |||  ||   ||||||||||||||||| || |||||||||| |||||||||||||||||    
T  28225221 gggaaatgctaactggtgcctctgggatacgggttaaggatatgaaaaaggaa-ttatatagtaattaatgtattgaaattg 28225301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 35043890 - 35043971
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||| |||| |  |||| ||||  ||||||||||||||||  |||||||||||||||||||  ||||||||||    
T  35043890 gggaaatgctaactggtgtccacgggacactggttaaggatatgaaaaaagaaattatatagtagttaattcattgaaattg 35043971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 2580952 - 2581032
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    |||||| |||||||||||||   | || |||  |||| ||||| |||||| |||||||||||||||||||| |||||||||    
T  2580952 gggaaatgctaaccggtgcccttgaggtactggttaatgatataaaaaaggaaattatatagtagttaatgcattgaaatt 2581032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 34712312 - 34712271
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggata 199  Q
    |||||| ||||||||||||||||||||||||  |||||||||    
T  34712312 gggaaatgctaaccggtgcctccggggcactggttaaggata 34712271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 13661802 - 13661889
Alignment:
Q  152 tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||||||| ||||||||||||| |||| |||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  13661802 tttaaagggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 13661889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 6283562 - 6283643
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| || |||||| ||||||||||    
T  6283562 gggaaatgctaaccggtgcctccggggcactagttaaagatatgaaaaagaaaattatataataattaatgcattgaaattg 6283643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 10069969 - 10070050
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  10069969 gggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 10070050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 35132518 - 35132603
Alignment:
Q  154 taaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||||| ||||||||||||| ||||| ||||  ||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  35132518 taaagggaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattg 35132603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 2619742 - 2619662
Alignment:
Q  159 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| |||||| |||| ||||||| ||||  ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2619742 ggaaatgctaactggtgtctccgggacacttgttaaggatatgaaaaagaaaattatttagtagttaatgtattgaaattg 2619662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 19647846 - 19647763
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| ||| ||||||||||  ||||||||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  19647846 aaggaaaatgctaaccggtatctccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 19647763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 35504426 - 35504345
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||| ||||| ||||  |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  35504426 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 35504345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 13470148 - 13470232
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| ||||||||||||||  ||||||||  ||||||||||||||||| |||| |||||||||| |||| ||||||||||    
T  13470148 aaagggaaatgctaaccggtgcctatggggcactggttaaggatatgaaaaaggaaataatatagtagtcaatgcattgaaattg 13470232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 34651029 - 34650938
Alignment:
Q  147 aataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||||  |||||| ||||||||||||| ||||| ||||  |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  34651029 aataatttattgggaaatgctaaccggtgcccccggg-cactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 34650938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 10054540 - 10054457
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||| || |||||| ||||||||||    
T  10054540 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatataataattaatgcattgaaattg 10054457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 12506287 - 12506377
Alignment:
Q  149 taatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| | |||||| ||||||||||||||| || |||||  |||||  |||||||||| |||||||||||||||||||| ||||||||||    
T  12506287 taattttatgggaaatgctaaccggtgcctctggagcactcgttaagagtatgaaaaaggaaattatatagtagttaatgcattgaaattg 12506377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 8787337 - 8787420
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||| | |||||||| |  |||||| |||||||||  |||||||||||||||||||| ||||||||||    
T  8787337 aagggaaatgctaaccggtgtccccggggcattggttaagggtatgaaaaatgaaattatatagtagttaatgcattgaaattg 8787420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 11958153 - 11958072
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||| |||||||||   |||| ||||| |||||| |||||||||||||||||||| | ||||||||    
T  11958153 gggaaatgctaaccggtgcccccggggcacaggttaaagatataaaaaaggaaattatatagtagttaatgcaatgaaattg 11958072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 40564594 - 40564509
Alignment:
Q  152 tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| ||||||| |||||||||||  |||||| ||   ||||||||| |||||||| |||||||||||||||||||| ||||||||||    
T  40564594 tttatagggaaatgctaaccggtg--tccgggacatcgattaaggatttgaaaaaggaaattatatagtagttaatgcattgaaattg 40564509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 4837256 - 4837338
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| | ||||||||||| |||||||||   ||||| ||||||||||| ||||||||||||| |||||| ||||||||||    
T  4837256 aagggaaatgttaaccggtgcc-ccggggcaccggttaagaatatgaaaaaggaaattatatagtaattaatgcattgaaattg 4837338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 39069379 - 39069461
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| |||||||||||| ||| |||||||  |||||| |||| ||||| |||||||||||||||||||| ||| ||||||    
T  39069379 aagggaaatgctaaccggtgcttccagggcactggttaagggtatg-aaaaggaaattatatagtagttaatgcattaaaattg 39069461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 31909628 - 31909712
Alignment:
Q  154 taaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||||| | ||||||||||||||||   |||  |||||||||| |||| | |||||||||||||||||||| ||||||||||    
T  31909628 taaagggaaatgttaaccggtgcctccggat-actggttaaggatattaaaagggaaattatatagtagttaatgcattgaaattg 31909712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 21547547 - 21547499
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||||| |||||| |||||||||||||||||||| ||||||||||    
T  21547547 ttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattg 21547499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 21945050 - 21944986
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggat-atgaaaaagaaaattatata 218  Q
    ||||||||| ||||||||||||||||||||||||  |||||||| || |||| ||||||||||||    
T  21945050 aaagggaaatgctaaccggtgcctccggggcactggttaaggataataaaaaggaaaattatata 21944986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 40057339 - 40057386
Alignment:
Q  190 attaaggatatgaaaaagaaaattatatagtagttaatgtattgaaat 237  Q
    |||||||||||||||||| ||||||||||||||||| || ||||||||    
T  40057339 attaaggatatgaaaaaggaaattatatagtagttagtgcattgaaat 40057386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 11846079 - 11846153
Alignment:
Q  165 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| ||||| | ||||| |||||  ||||||||| |||||| |||||||||||||||||||  ||||||||||    
T  11846079 gctaagcggtgtccccgggacactagctaaggatataaaaaaggaaattatatagtagttaatacattgaaattg 11846153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 6284828 - 6284876
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||||  |||||| ||||||||||||| |||||||||||||||||    
T  6284828 ttaaggatactaaaaaggaaattatatagtaattaatgtattgaaattg 6284876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 9721760 - 9721712
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| ||||||||||| ||||||||||||| |||||| ||||||||||    
T  9721760 ttaagaatatgaaaaaggaaattatatagtaattaatgcattgaaattg 9721712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 19436989 - 19436941
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||||||| |||||||||||| ||||| | ||||||||||    
T  19436989 ttaaggatatgaaaaaggaaattatatagtggttaaagcattgaaattg 19436941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 20175228 - 20175308
Alignment:
Q  159 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| ||||||||||| ||||| | ||||  ||||  |||| |||||  |||||||||||||||||||| ||||||||||    
T  20175228 ggaaatgctaaccggtgtctccgagacactggttaaaaatataaaaaaagaaattatatagtagttaatgcattgaaattg 20175308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 4089136 - 4089223
Alignment:
Q  152 tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| ||||||| ||||||||||||| | |||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  4089136 tttatagggaaatgctaaccggtgcccctggggcactgattaagggtatgaaaaagaaaattatatagtagttaatgcattgaaattg 4089223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 43944505 - 43944588
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||||||||||||||  |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  43944505 aagggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 43944588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 16536041 - 16536129
Alignment:
Q  151 atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| |||||||| ||||||||||||| |||||||||  ||||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  16536041 attttaagggaaatgctaaccggtgcccccggggcacggattaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 16536129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 54897308 - 54897389
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||| ||||||||||  |||||||||||| |||| |||||||||||||||||||| ||||||||||    
T  54897308 gggaaatgctaaccggtgcccccggggcactggttaaggatatgagaaaggaaattatatagtagttaatgcattgaaattg 54897389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 789719 - 789635
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| ||||||||||||| |||||||||   |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  789719 aaagggaaatgctaaccggtgcccccggggcacgggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 789635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 7768935 - 7769019
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| ||||| |||| || ||||||||||  |||||| |||||||||| |||||||||||||||||||||||||||||||    
T  7768935 aaagggaaatgctaatcggtacccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgtattgaaattg 7769019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 15186240 - 15186324
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||||||  ||||||||||    
T  15186240 aaagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatccattgaaattg 15186324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 18068071 - 18067984
Alignment:
Q  152 tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| ||||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||||||| ||| ||||||    
T  18068071 tttatagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattg 18067984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 43202571 - 43202488
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||| |||||| ||| ||||||    
T  43202571 aagggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaaggaaattatatagtaattaatgcattaaaattg 43202488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 50619093 - 50619167
Alignment:
Q  165 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||  |||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  50619093 gctaactggtgctcccggggcactgattaagaatatgaaaaagaaaattatatagtagttaatgcattgaaattg 50619167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 55882683 - 55882764
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| ||||||||||| ||||||||||||  |||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  55882683 agggaaatgctaaccggtgtctccggggcactcgttaaggatatgaaaaa-aaaattatatagtaattaatgcattgaaattg 55882764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 4269009 - 4268928
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    ||||||| ||||||||||||| ||||||||||  |||||| |||||||||| ||| |||||||||||||||| |||||||||    
T  4269009 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaatt 4268928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 24679827 - 24679747
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||| ||| ||||||||  ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  24679827 gggaaatgctaaccggtgtctc-ggggcactggttaaggatatgaaaaaagaaattatatagtagttaatgtattgaaattg 24679747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 32217045 - 32217126
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||| |||||| ||||||||||  |||||||||| |||||| |||||||||||||||||||| ||||||||||    
T  32217045 gggaaatgctaactggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattg 32217126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 29591186 - 29591270
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| |||||| |||||| ||||||||||  ||||| ||||||| ||| |||||||||||||||||||| ||||||||||    
T  29591186 aaagggaaatgctaactggtgcccccggggcactggttaagaatatgaataaggaaattatatagtagttaatgcattgaaattg 29591270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 52533981 - 52533890
Alignment:
Q  148 ataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| ||||||||||| | |||||||||||||| || ||||  ||||| ||||||||||| |||||||||||||||||||| | ||||||||    
T  52533981 ataaattaaagggaaatgttaaccggtgcctccaggacactggttaagaatatgaaaaaggaaattatatagtagttaatgcactgaaattg 52533890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 47232061 - 47231979
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaat 237  Q
    ||||||||| ||||||||||||| |||| |||||  |||||||| |||||||| |||||||||| ||||||||| ||||||||    
T  47232061 aaagggaaatgctaaccggtgcccccggagcactggttaaggatgtgaaaaaggaaattatataatagttaatgcattgaaat 47231979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 49915158 - 49915240
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| || |||||| ||| | || ||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  49915158 agggaaatgcaaaccggcgcccctggtgcactgattaaggatatgaaaaagaaatttatatagtaattaatgtattgaaattg 49915240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 4220195 - 4220276
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| | |||||| ||||| ||||| ||   ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4220195 gggaaatgataaccgatgccttcggggtacgggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattg 4220276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 28755621 - 28755701
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||| | || |||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  28755621 gggaaatgctaaccggtgtc-ccagggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 28755701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 33108860 - 33108780
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaat 237  Q
    |||||||| | ||||||||||||||||||||||  ||||| ||||||||||| |||||||||| ||||||||| ||||||||    
T  33108860 aagggaaatgttaaccggtgcctccggggcactggttaag-atatgaaaaaggaaattatataatagttaatgcattgaaat 33108780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 42898939 - 42898851
Alignment:
Q  151 atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| ||||||| | ||| |||||| ||| |||||||  |||||||||| |||||| |||||||||||||||||||| ||||||||||    
T  42898939 atttatagggaaatgttaatcggtgcttccagggcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattg 42898851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 30154327 - 30154269
Alignment:
Q  179 ccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  30154327 ccggggcactagttaag-atatgaaaaaggaaattatatagtagttaatgtattgaaatt 30154269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 54656039 - 54655981
Alignment:
Q  181 ggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||  |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  54656039 ggggcactggttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattg 54655981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 54945941 - 54945883
Alignment:
Q  181 ggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||  ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  54945941 ggggcactggttaaggatatgaaaaaggaaattatatagcagttaatgtattgaaattg 54945883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 3783687 - 3783606
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||||||||||||||||||||   ||||  ||||||||||  |||||||||||||||||||| ||| ||||||    
T  3783687 gggaaatgctaaccggtgcctccggggcaccggttaaacatatgaaaaatgaaattatatagtagttaatgcattaaaattg 3783606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 32202666 - 32202585
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| | ||||||||| | |||||||||   |||||||||| |||||| |||||||||||||||||||| ||||||||||    
T  32202666 gggaaatgttaaccggtgtccccggggcacgggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattg 32202585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 37987968 - 37988016
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||    
T  37987968 ttaagggtatgaaaaaggaaattatatagtagttaatgtattgaaattg 37988016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 54054548 - 54054627
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaat 237  Q
    |||||| ||||||||||||| | |||||||   ||||||||||||||||  |||||||||| ||||||||| ||||||||    
T  54054548 gggaaatgctaaccggtgccccgggggcaccggttaaggatatgaaaaaagaaattatataatagttaatgcattgaaat 54054627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 12356242 - 12356324
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    |||||||| ||||||||||||| | | |  |||  ||||||||||||||||| |||||||||||||||||||  |||||||||    
T  12356242 aagggaaatgctaaccggtgcccctgagatactggttaaggatatgaaaaaggaaattatatagtagttaatacattgaaatt 12356324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 6164091 - 6164174
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| | ||||||||||    ||||||||  |||||||||| |||| |||||||||||||||||||||| ||||||||||    
T  6164091 aaagggaaatgataaccggtgctcttggggcactggttaaggatatcaaaa-gaaaattatatagtagttaatgcattgaaattg 6164174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 19503289 - 19503210
Alignment:
Q  159 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| |||||||||||| ||| ||| |||  ||||||||||||||||| |||||||||| ||||||||  ||||||||||    
T  19503289 ggaaatgctaaccggtgc-tcccgggtactggttaaggatatgaaaaaggaaattatatactagttaatacattgaaattg 19503210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 46688398 - 46688310
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaa-----gaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| |||||| |||||| ||| ||||||  ||||||||||||||||     |||||||||| ||||||||||| ||||||||||    
T  46688398 aagggaaatgctaactggtgcccccgaggcactggttaaggatatgaaaaattaaagaaaattatacagtagttaatgcattgaaattg 46688310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 53656031 - 53655983
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||||||  |||||||||| ||||||||||||||||||||    
T  53656031 ttaaggatatgaaaaaagaaattatataatagttaatgtattgaaattg 53655983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 39843940 - 39843987
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    ||||||||||||||||  |||||||||||||||||||| |||||||||    
T  39843940 ttaaggatatgaaaaatgaaattatatagtagttaatgcattgaaatt 39843987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 42815142 - 42815189
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||||    
T  42815142 ttaaggatatgaaaaaggaaattatatcatagttaatgtattgaaatt 42815189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 50167590 - 50167670
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| |||||||||||    |||||||||  |||| |||||||||||||||||  |||||||||||||| ||||||||||    
T  50167590 agggaaatgctaaccggtgttctcggggcactggttaaagatatgaaaaagaaaat--tatagtagttaatgcattgaaattg 50167670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 36395138 - 36395180
Alignment:
Q  197 atatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||| |||||||||||||||||||| ||||||||||    
T  36395138 atatgaaaaaggaaattatatagtagttaatgcattgaaattg 36395180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 41265455 - 41265540
Alignment:
Q  154 taaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||||| | ||| ||||| | ||||| ||||| ||||| |||  |||| |||||||||||||||||||||| | ||||||||    
T  41265455 taaagggaaatgttaatcggtgtccccgggacactagttaagcatactaaaatgaaaattatatagtagttaatgcagtgaaattg 41265540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 52697085 - 52697121
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaat 227  Q
    |||||||||||||||| ||||||||||||||||||||    
T  52697085 ttaaggatatgaaaaacaaaattatatagtagttaat 52697121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 5091798 - 5091715
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||  ||||||||| |  ||||||||||  ||||| |||||||||| ||||||||||| || ||||| |||| ||||||    
T  5091798 aagggaaatactaaccggtactcccggggcactggttaagaatatgaaaaataaaattatataataattaatatattaaaattg 5091715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 10110189 - 10110147
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggata 199  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||    
T  10110189 agggaaatgctaaccggtgcctccgggacactgattaaggata 10110147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 1432695 - 1432659
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaat 227  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  1432695 ttaaggatatgaaaaaggaaattatataatagttaat 1432659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 31680616 - 31680568
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||||| ||| ||| ||||||||| ||||||||||    
T  31680616 ttaagggtatgaaaaagaaagttacataatagttaatgcattgaaattg 31680568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 825 - 906
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||| ||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  825 gggaaatgctagccggtgcttccggagcactagttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattg 906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 50548 - 50629
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| | ||||||||||||||||||||||  |||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  50548 gggaaatgttaaccggtgcctccggggcactggttaaagatatgaaaaaggaaattatatagtagttaatgttttgaaattg 50629  T

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Target: scaffold0045; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 53499 - 53451
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||||| |||||| |||||||||||||||||||| ||||||||||    
T  53499 ttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattg 53451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 34606261 - 34606342
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||| |||||||||||||||||  ||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  34606261 gggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattg 34606342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 24438477 - 24438557
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    |||||| ||||||||||||| ||||||||||| |||||| |||||||||| ||| |||||||||||||||| |||||||||    
T  24438477 gggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaatt 24438557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 29993676 - 29993592
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| |||||| |||||| |||||||||   ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  29993676 aaagggaaatgctaacgggtgcccccggggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 29993592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 47656981 - 47657061
Alignment:
Q  159 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| |||||||||||| || ||||||||  ||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  47656981 ggaaatgctaaccggtgcttcgggggcactggttaaggatatgaaaaagaaaattatatagtaattaatgcattgaaattg 47657061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 12218624 - 12218541
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||| ||||||||||   |||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  12218624 aagggaaatgctaaccggtgcccccggggcactggataagtatatgaaaaaggaaattatatagtagttaatgcattgaaattg 12218541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 18485959 - 18486042
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||| ||||||||||  ||||||||||  ||||| ||||||||||||| |||||||||||||||||    
T  18485959 aagggaaatgctaaccggtgcccccggggcactggttaaggatattgaaaaggaaattatatagtaattaatgtattgaaattg 18486042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 34333282 - 34333365
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||| ||||||||||  |||||| |||||||||| ||||||||||||| |||||| ||||||||||    
T  34333282 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtaattaatgcattgaaattg 34333365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 5239284 - 5239366
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| |||||||||||||||||| |||||  |||| | |||||||||| |||||||||||||||||||| ||||||||||    
T  5239284 agggaaatgctaaccggtgcctccggagcactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattg 5239366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 24798590 - 24798508
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||| ||||| ||||  || |||||||||||||| |||||||||||||||||||| ||||||||||    
T  24798590 aagggaaatgctaaccggtgcccccggg-cacttgttgaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 24798508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 4628563 - 4628647
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| |||||||| |||| | |||||||   ||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  4628563 aaagggaaatgctaaccgatgcccctggggcaccggttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattg 4628647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 28587911 - 28587990
Alignment:
Q  159 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| ||||||||||||| ||||  ||||  ||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  28587911 ggaaatgctaaccggtgcccccgga-cactggttaaggatatgaaaaaggaaattatatagtagtcaatgtattgaaattg 28587990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 30810676 - 30810736
Alignment:
Q  179 ccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  30810676 ccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 30810736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 34546503 - 34546419
Alignment:
Q  155 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| |||||||| |||| ||| || ||   ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  34546503 aaagggaaatgctaaccgatgcccccgaggtaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 34546419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 1736980 - 1737059
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaat 237  Q
    |||||| |||||||||||| || ||||||||  ||||||||||||||||  |||||||||| ||||||||| ||||||||    
T  1736980 gggaaatgctaaccggtgcttctggggcactggttaaggatatgaaaaatgaaattatataatagttaatgcattgaaat 1737059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 5729344 - 5729425
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaat 237  Q
    |||||||| | |||||||||   |||| |||||  ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  5729344 aagggaaatgttaaccggtgttcccggagcactggttaaggatatgaaaaaggaaattatataatagttaatgtattgaaat 5729425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 8754771 - 8754690
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||||||||||   || |||||  ||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  8754771 gggaaatgctaaccggtgccctgggagcactggttaaggatatgaaaaatgaaattatatagtagttaatgcattgaaattg 8754690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 7689393 - 7689305
Alignment:
Q  151 atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||| | ||||||||| ||| ||| |||| ||||||||||| |||||| ||||| || |||| |||||| ||||||||||    
T  7689393 atttaaagggaaatgttaaccggtgtctctgggacactgattaaggatataaaaaaggaaattttacagtaattaatgcattgaaattg 7689305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 28262038 - 28262098
Alignment:
Q  165 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 225  Q
    ||||||||||||||||||| |||   ||||||||||||||||| |||||||||||||||||    
T  28262038 gctaaccggtgcctccgggtcaccggttaaggatatgaaaaaggaaattatatagtagtta 28262098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 47083088 - 47083136
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  47083088 ttaaggatatgaaaaaagaaattatatagtagttaatgtattgaaattg 47083136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 11686503 - 11686429
Alignment:
Q  165 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||| ||||||  |||  |||||||||| |||||| |||||||||||||||||||| ||||||||||    
T  11686503 gctaactggtgcttccgggatactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattg 11686429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 27456299 - 27456218
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| |||||| |||||| ||||| ||||  ||||||||||| ||||  |||||||||||||||||||| ||||||||||    
T  27456299 agggaaatgctaactggtgcccccggg-cactggttaaggatatggaaaaagaaattatatagtagttaatgcattgaaattg 27456218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 43594222 - 43594141
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||| | ||||  ||||  |||||||||| |||||| |||||||||| ||||||||| ||||||||||    
T  43594222 gggaaatgctaaccggtgtccccggaacactggttaaggatataaaaaaggaaattatataatagttaatgcattgaaattg 43594141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 18117176 - 18117224
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| |||||||| || |||||||||||||||||||||||||||||||    
T  18117176 ttaagtatatgaaagaggaaattatatagtagttaatgtattgaaattg 18117224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 4100677 - 4100630
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    ||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  4100677 ttaaggatatgaaaaaggaaattatatagtaattaatgtattaaaatt 4100630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 23357894 - 23357823
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatg 228  Q
    ||||||| | |||||||| |||| || | |||  ||||||||||||||||||||||| ||||||||||||||    
T  23357894 agggaaatgttaaccggttcctctggagtactcgttaaggatatgaaaaagaaaattgtatagtagttaatg 23357823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 22973593 - 22973667
Alignment:
Q  153 ttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaat 227  Q
    |||||| |||| ||||||  ||||||||||||||||  |||| ||||| |||||  |||||||||||||||||||    
T  22973593 ttaaagagaaatgctaactagtgcctccggggcactggttaatgatataaaaaaagaaattatatagtagttaat 22973667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 47839492 - 47839573
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| ||||||||||| | |||||| |||  ||||||||||||||||| || ||||||| ||||||||  ||||||||||    
T  47839492 agggaaatgctaaccggtgtc-ccggggtactggttaaggatatgaaaaaggaatttatataatagttaatacattgaaattg 47839573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 525228 - 525180
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| |||||||||||||||| |||| ||||||||||| ||||||||||    
T  525228 ttaaagatatgaaaaagaaaagtatacagtagttaatgcattgaaattg 525180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 13065030 - 13064986
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaa 235  Q
    ||||||||||||||||| |||||||||| || |||||||||||||    
T  13065030 ttaaggatatgaaaaaggaaattatataatatttaatgtattgaa 13064986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 18220591 - 18220543
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||||  |||||||||||||||||||| |||||||||| ||||||    
T  18220591 ttaaggatactaaaaagaaaattatatagtaattaatgtattaaaattg 18220543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 23363320 - 23363272
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||| ||||||| ||||| |||||||||||||| ||||||||||    
T  23363320 ttaaggataagaaaaaggaaattgtatagtagttaatgcattgaaattg 23363272  T

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Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 47118150 - 47118095
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaatt 213  Q
    |||||| |||||| |||||||||||||||||  |||| |||||||||||| |||||    
T  47118150 gggaaatgctaactggtgcctccggggcactggttaaagatatgaaaaaggaaatt 47118095  T

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Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 33636479 - 33636533
Alignment:
Q  185 cactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| ||||| |||||||||||||||||||||| || |||||  ||||||||||    
T  33636479 cactagttaagaatatgaaaaagaaaattatataataattaattcattgaaattg 33636533  T

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Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 19434502 - 19434534
Alignment:
Q  167 taaccggtgcctccggggcactaattaaggata 199  Q
    |||||||||||||||||||||| ||||||||||    
T  19434502 taaccggtgcctccggggcactgattaaggata 19434534  T

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Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 29835857 - 29835809
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| |||||||||||| || ||||||| ||||||||||||| ||||||    
T  29835857 ttaaagatatgaaaaaggaagttatatactagttaatgtattaaaattg 29835809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 38022632 - 38022600
Alignment:
Q  204 aaagaaaattatatagtagttaatgtattgaaa 236  Q
    |||||||||||||||||||||| ||||||||||    
T  38022632 aaagaaaattatatagtagttattgtattgaaa 38022600  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 45045803 - 45045851
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||||||  ||||||||||||| |||||| ||||||||||    
T  45045803 ttaagggtatgaaaaatgaaattatatagtaattaatgcattgaaattg 45045851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 53877 - 53790
Alignment:
Q  152 tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| ||||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||||||| ||| ||||||    
T  53877 tttatagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattg 53790  T

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Target: scaffold0264 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 22959 - 23042
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||| |||| |||||  ||||||||||||||||| ||||||||||||| |||||  ||||||||||    
T  22959 aagggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtaattaatacattgaaattg 23042  T

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Target: scaffold0021 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 116202 - 116285
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||| ||| ||||||||||||| |||||||||   |||| |||||||||||| |||||||||||||||||||| ||||||||||    
T  116202 aaggaaaatgctaaccggtgcccccggggcacaggttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattg 116285  T

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Target: scaffold0014 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 68478 - 68395
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| |||||| |||||| ||||||||||  ||||||||||||||||  |||||||||||||||||||| ||| ||||||    
T  68478 aagggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcattaaaattg 68395  T

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Target: scaffold0188 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 6295 - 6215
Alignment:
Q  159 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| ||||||||||||| | ||||||||  ||||||||||||||||| ||| |||||||||||||||| |||| |||||    
T  6295 ggaaatgctaaccggtgcccctggggcactggttaaggatatgaaaaaggaaactatatagtagttaatgcattggaattg 6215  T

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Target: scaffold0002 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 147093 - 147010
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||| ||||||||||||  | ||||  ||| ||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  147093 aagggaaatgctaaccggtgctcctggggttctagttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattg 147010  T

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Target: scaffold1266 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 292 - 373
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||  |||||||||||| || |||||||  ||||| |||||||||||||||||||||| ||||||||| ||||||||||    
T  292 agggaaatcctaaccggtgcc-ccagggcactggttaagcatatgaaaaagaaaattatataatagttaatgcattgaaattg 373  T

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Target: scaffold0674 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 8059 - 8002
Alignment:
Q  182 gggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  8059 gggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 8002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 7312 - 7369
Alignment:
Q  182 gggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  7312 gggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattg 7369  T

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Target: scaffold0190 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 14896 - 14977
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| ||||||||||| | ||||||||||  |||| ||||| |||||  |||||||||||||||||||| | ||||||||    
T  14896 gggaaatgctaaccggtgtccccggggcactggttaaagatataaaaaaagaaattatatagtagttaatgcactgaaattg 14977  T

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Target: scaffold0325 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 17619 - 17575
Alignment:
Q  195 ggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  17619 ggatatgaaaaagaaaattatatagtagctaatgcattgaaattg 17575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 11123 - 11075
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  11123 ttaaggatatgaaaaaggaaattatatattagttaatgcattgaaattg 11075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 677 - 759
Alignment:
Q  157 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||||| ||||| ||||||| || | ||||   |||| |||||||||||| |||||||||||||||||||  ||||||||||    
T  677 agggaaatgctaatcggtgcccccagagcacgggttaaagatatgaaaaaggaaattatatagtagttaatccattgaaattg 759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 95772 - 95690
Alignment:
Q  156 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaatt 238  Q
    |||| ||| ||||||||||||| ||| || |||  ||||| ||||||||||| |||||||||| || |||||| |||||||||    
T  95772 aaggaaaatgctaaccggtgcccccgaggtactggttaagaatatgaaaaaggaaattatataataattaatgaattgaaatt 95690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 69250 - 69295
Alignment:
Q  182 gggcactaattaaggatatgaaaaagaaaattatatagtagttaat 227  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||    
T  69250 gggcactcgttaaggatatgaaaaagtaaattatatagtagttaat 69295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 25719 - 25799
Alignment:
Q  158 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    |||||| |||||| |||||||| |||  ||   ||||||||||||||||| || |||||||||| |||||||||||||||||    
T  25719 gggaaatgctaactggtgcctctgggatacgggttaaggatatgaaaaaggaa-ttatatagtaattaatgtattgaaattg 25799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 5072 - 5120
Alignment:
Q  191 ttaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattg 239  Q
    ||||| |||| ||||| |||||||||||||||||||| |||||||||||    
T  5072 ttaagaatattaaaaaaaaaattatatagtagttaatttattgaaattg 5120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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