View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20611_low_26 (Length: 214)
Name: NF20611_low_26
Description: NF20611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20611_low_26 |
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Alignment Details
Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 34122992 - 34123191
Alignment:
| Q |
1 |
aagctttcggttttcttcatttttatagtctaaattcatttctatatttcattctaatggttcgcacaaccctcttcataatttctaatataccaatttt |
100 |
Q |
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| T |
34122992 |
aagctttcggttttcttcatttttatagtctaaattcatttctatatttcattctaatggttcgcacaaccctcttcagaatttctaatataccaatttt |
34123091 |
T |
|
| Q |
101 |
gtcattatacgatatatatacttattgctcttattacttatctttcatgttttttgacaaatcacccttcatttttgtgtgtgcatgtttatgaaagcac |
200 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34123092 |
gtgattatacgatatatatacttattgctcttattacttatctttcatgttttttgacaaatcacccttcatttttgtgtgtgcatgtttatgaaagcac |
34123191 |
T |
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