View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20611_low_4 (Length: 472)
Name: NF20611_low_4
Description: NF20611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20611_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 449; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 1 - 453
Target Start/End: Complemental strand, 43860936 - 43860484
Alignment:
| Q |
1 |
ggttgcgtttcaggggtgtgacgcatcggttttgttggagtccactgctggtaacacggcggagaaggatgccattcctaatttatcattagcaggcttt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43860936 |
ggttgcgtttcaggggtgtgacgcatcggttttgttggagtccactgctggtaacacggcggagaaggatgccattcctaatttatcattagcaggcttt |
43860837 |
T |
|
| Q |
101 |
gatgtaatagaagacataaaagaagctttggaggaaaaatgtccaggaattgtttcatgtgctgatatactcacattggctactagagatgctgttagta |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43860836 |
gatgtaatagaagacataaaagaagctttggaggaaaaatgtccaggaattgtttcatgtgctgatatactcacattggctactagagatgctgttagta |
43860737 |
T |
|
| Q |
201 |
atttatcaagctagctagagacgagtctatacatatttatgcatgtagcatcatattgattcattcatattttttattacagtttaagaataaaccaaat |
300 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43860736 |
atttatcaagctagctagagacgagtctatacatatttatgcatgtagcatcatattgattcattcatattttttattacagtttaagaataaaccaaat |
43860637 |
T |
|
| Q |
301 |
tgggaagtacttacgggtagaagagatggtactgtgtccagaagcattgaagccctaatcaatatcccggcacctttccataacatcacacagctcagac |
400 |
Q |
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|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43860636 |
tgggaagtgcttacgggtagaagagatggtactgtgtccagaagcattgaagccctaatcaatatcccggcacctttccataacatcacacagctcagac |
43860537 |
T |
|
| Q |
401 |
aaatctttgctaataaaaagcttactcttcatgacttggttgtattatcaggt |
453 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
43860536 |
aaatctttgctaataaaaagcttactcttcatgacttggttgtattatcaggt |
43860484 |
T |
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