View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20611_low_8 (Length: 379)

Name: NF20611_low_8
Description: NF20611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20611_low_8
NF20611_low_8
[»] chr1 (25 HSPs)
chr1 (19-379)||(31181570-31181931)
chr1 (111-379)||(31004494-31004758)
chr1 (19-91)||(31004755-31004827)
chr1 (318-375)||(52676334-52676391)
chr1 (316-375)||(43480337-43480396)
chr1 (318-379)||(17468310-17468371)
chr1 (323-379)||(35772235-35772291)
chr1 (318-376)||(21626399-21626457)
chr1 (331-376)||(32223742-32223787)
chr1 (318-379)||(52907350-52907411)
chr1 (323-379)||(2859449-2859505)
chr1 (323-379)||(17452885-17452941)
chr1 (320-379)||(49142921-49142980)
chr1 (325-379)||(52650828-52650882)
chr1 (319-372)||(12377021-12377074)
chr1 (324-373)||(42944093-42944142)
chr1 (318-374)||(11234182-11234238)
chr1 (351-379)||(15183476-15183504)
chr1 (323-379)||(15986390-15986446)
chr1 (323-379)||(20208583-20208639)
chr1 (323-379)||(25713364-25713420)
chr1 (323-379)||(26173513-26173569)
chr1 (323-379)||(39348176-39348232)
chr1 (323-379)||(39808437-39808493)
chr1 (323-379)||(51459887-51459943)
[»] chr4 (38 HSPs)
chr4 (316-377)||(7926292-7926353)
chr4 (318-379)||(7926524-7926585)
chr4 (318-375)||(44118920-44118977)
chr4 (331-379)||(32333967-32334015)
chr4 (323-379)||(35609547-35609603)
chr4 (318-377)||(50870539-50870597)
chr4 (337-379)||(25324090-25324132)
chr4 (318-379)||(11056389-11056450)
chr4 (323-379)||(22827509-22827565)
chr4 (318-374)||(26549602-26549658)
chr4 (323-379)||(27634138-27634194)
chr4 (323-379)||(31254464-31254520)
chr4 (323-379)||(39902620-39902676)
chr4 (318-369)||(28208401-28208452)
chr4 (318-377)||(32002523-32002582)
chr4 (327-374)||(38808739-38808786)
chr4 (320-374)||(21041319-21041373)
chr4 (315-377)||(50870755-50870817)
chr4 (322-375)||(1333570-1333623)
chr4 (338-379)||(2221025-2221066)
chr4 (318-371)||(7572536-7572589)
chr4 (342-375)||(7572763-7572796)
chr4 (318-379)||(12005526-12005587)
chr4 (318-379)||(25323855-25323916)
chr4 (318-379)||(27464305-27464366)
chr4 (331-379)||(9279206-9279254)
chr4 (323-379)||(11036803-11036859)
chr4 (317-373)||(26030278-26030334)
chr4 (323-379)||(27634573-27634629)
chr4 (331-379)||(28245583-28245631)
chr4 (323-379)||(35788630-35788686)
chr4 (323-379)||(35788865-35788921)
chr4 (323-379)||(35796799-35796855)
chr4 (323-379)||(50543624-50543680)
chr4 (333-373)||(50828271-50828311)
chr4 (331-379)||(52559546-52559594)
chr4 (323-379)||(53814986-53815042)
chr4 (323-379)||(53828580-53828636)
[»] chr5 (19 HSPs)
chr5 (318-377)||(7369690-7369749)
chr5 (317-379)||(1564624-1564686)
chr5 (318-379)||(15438843-15438904)
chr5 (330-379)||(16707082-16707131)
chr5 (323-379)||(17150290-17150346)
chr5 (322-379)||(7092120-7092176)
chr5 (318-379)||(15439189-15439250)
chr5 (346-379)||(17899517-17899550)
chr5 (331-379)||(6413483-6413531)
chr5 (323-379)||(9368801-9368857)
chr5 (323-379)||(33337295-33337351)
chr5 (349-379)||(60084-60114)
chr5 (318-372)||(1935783-1935837)
chr5 (338-379)||(17352492-17352533)
chr5 (318-379)||(35167452-35167513)
chr5 (323-375)||(8081175-8081227)
chr5 (323-375)||(24346562-24346614)
chr5 (323-379)||(41666814-41666870)
chr5 (323-379)||(41667050-41667106)
[»] chr3 (23 HSPs)
chr3 (318-379)||(41915137-41915198)
chr3 (318-379)||(45828212-45828273)
chr3 (317-379)||(50930667-50930729)
chr3 (323-379)||(47684503-47684559)
chr3 (323-379)||(49629577-49629632)
chr3 (318-375)||(30179769-30179826)
chr3 (323-376)||(34221574-34221627)
chr3 (330-379)||(35018689-35018738)
chr3 (318-379)||(46853995-46854056)
chr3 (318-378)||(20264284-20264344)
chr3 (323-379)||(35038485-35038541)
chr3 (318-374)||(50052828-50052884)
chr3 (323-379)||(54368487-54368543)
chr3 (325-376)||(22775458-22775509)
chr3 (332-375)||(34221740-34221783)
chr3 (333-375)||(23610432-23610474)
chr3 (318-379)||(1800181-1800242)
chr3 (318-375)||(13574982-13575039)
chr3 (330-379)||(45138859-45138908)
chr3 (318-379)||(45139028-45139089)
chr3 (318-375)||(50052601-50052658)
chr3 (337-373)||(1681690-1681726)
chr3 (323-375)||(35038255-35038307)
[»] chr8 (27 HSPs)
chr8 (318-379)||(7729907-7729968)
chr8 (316-379)||(38447484-38447547)
chr8 (316-379)||(42049744-42049807)
chr8 (318-379)||(34236705-34236766)
chr8 (318-370)||(12022454-12022506)
chr8 (323-379)||(20301232-20301288)
chr8 (323-379)||(21087864-21087920)
chr8 (323-379)||(24532478-24532534)
chr8 (315-379)||(37868640-37868704)
chr8 (320-375)||(8466549-8466604)
chr8 (316-379)||(8466781-8466844)
chr8 (317-379)||(30953055-30953117)
chr8 (318-379)||(29907783-29907844)
chr8 (318-379)||(31079619-31079680)
chr8 (322-379)||(44931239-44931296)
chr8 (318-378)||(6462925-6462985)
chr8 (323-379)||(12688278-12688334)
chr8 (323-379)||(15042727-15042783)
chr8 (323-379)||(35682838-35682894)
chr8 (323-379)||(39052986-39053042)
chr8 (323-375)||(39960162-39960214)
chr8 (318-371)||(4873755-4873808)
chr8 (318-379)||(37868405-37868466)
chr8 (323-375)||(6541885-6541937)
chr8 (323-379)||(11232251-11232307)
chr8 (323-379)||(28069414-28069470)
chr8 (323-379)||(39052594-39052650)
[»] chr7 (20 HSPs)
chr7 (318-379)||(47849537-47849598)
chr7 (330-379)||(15317531-15317579)
chr7 (318-376)||(32292484-32292543)
chr7 (323-375)||(18826549-18826601)
chr7 (323-379)||(21861500-21861556)
chr7 (323-379)||(43688216-43688272)
chr7 (323-379)||(48243494-48243550)
chr7 (341-379)||(474739-474777)
chr7 (323-377)||(33515670-33515724)
chr7 (318-375)||(32879676-32879733)
chr7 (323-379)||(2404231-2404287)
chr7 (323-375)||(3519786-3519838)
chr7 (318-374)||(11211740-11211796)
chr7 (323-379)||(17202150-17202206)
chr7 (323-379)||(29469576-29469632)
chr7 (323-379)||(29469811-29469867)
chr7 (323-379)||(31485481-31485537)
chr7 (331-379)||(36277283-36277331)
chr7 (351-379)||(40898979-40899007)
chr7 (315-371)||(48417580-48417636)
[»] chr6 (21 HSPs)
chr6 (323-379)||(6543000-6543056)
chr6 (323-379)||(2736459-2736515)
chr6 (323-379)||(2737227-2737283)
chr6 (318-374)||(9601888-9601944)
chr6 (323-379)||(33494510-33494566)
chr6 (323-373)||(24837117-24837167)
chr6 (318-367)||(466318-466367)
chr6 (318-379)||(3823270-3823331)
chr6 (321-378)||(12319732-12319789)
chr6 (318-375)||(16570125-16570182)
chr6 (330-379)||(19639170-19639219)
chr6 (323-379)||(3680217-3680273)
chr6 (323-379)||(4868634-4868690)
chr6 (323-379)||(4906777-4906833)
chr6 (323-379)||(6237759-6237815)
chr6 (323-379)||(12199862-12199918)
chr6 (323-379)||(13353172-13353228)
chr6 (323-379)||(19712923-19712979)
chr6 (323-379)||(31961149-31961205)
chr6 (318-374)||(31996875-31996931)
chr6 (323-379)||(33796297-33796353)
[»] chr2 (19 HSPs)
chr2 (331-379)||(8227328-8227376)
chr2 (323-379)||(33606111-33606167)
chr2 (321-379)||(14927071-14927129)
chr2 (323-379)||(17719371-17719427)
chr2 (323-379)||(37812555-37812611)
chr2 (323-379)||(37840308-37840364)
chr2 (317-379)||(13210491-13210553)
chr2 (323-379)||(94077-94133)
chr2 (323-379)||(5711496-5711552)
chr2 (323-379)||(5711732-5711788)
chr2 (318-370)||(10523219-10523271)
chr2 (332-379)||(14522837-14522882)
chr2 (319-379)||(15988380-15988439)
chr2 (323-379)||(16419473-16419529)
chr2 (351-379)||(19571031-19571059)
chr2 (323-379)||(31700805-31700861)
chr2 (323-379)||(37812325-37812381)
chr2 (323-379)||(40379266-40379322)
chr2 (323-379)||(40379501-40379557)
[»] scaffold0001 (1 HSPs)
scaffold0001 (323-377)||(429844-429898)
[»] scaffold0224 (1 HSPs)
scaffold0224 (324-373)||(26832-26881)
[»] scaffold0766 (1 HSPs)
scaffold0766 (323-379)||(6245-6301)
[»] scaffold0692 (1 HSPs)
scaffold0692 (323-379)||(5811-5867)
[»] scaffold0519 (1 HSPs)
scaffold0519 (323-379)||(2122-2178)
[»] scaffold0041 (1 HSPs)
scaffold0041 (351-379)||(67277-67305)


Alignment Details
Target: chr1 (Bit Score: 338; Significance: 0; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 19 - 379
Target Start/End: Complemental strand, 31181931 - 31181570
Alignment:
Q  19 aacttaacacttattttagccaaagctgtttcgtagctccttcctttggtaattttctttgcagggaatcttataaatctctgcaaaaacaacttaaaaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31181931 aacttaacacttattttagccaaagctgtttcgtagctccttcttttggtaattttctttgcagggaatcttataaatcactgcaaaaacaacttaaaaa 31181832  T
Q  119 gttaggcaaaataggatttgaagcagaattttttggatatgaagtttcacaacgtaaaaggaatatcttaagtttgagatggtctattcccatcacccac 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  31181831 gttaggcaaaataggatttgaagcagaattttttggatatgaagtttcacaacgtaaaaggaatatcttaagtttgagatggtctattcccatcacccat 31181732  T
Q  219 ctaaaaatggagaatccttatttgtaaaaatggaaatgtctaagtagaaattactttaaagaaaacattaactatggttcagtgctgttgtattagaact 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31181731 ctaaaaatggagaatccttatttgtaaaaatggaaatgtctaagtagaaattactttaaagaaaacattaactatggttcagtactgttgtattagaact 31181632  T
Q  319 gtt-aaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31181631 gttaaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 31181570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 111 - 379
Target Start/End: Complemental strand, 31004758 - 31004494
Alignment:
Q  111 cttaaaaagttaggcaaaataggatttgaagcagaattttttggatatgaagtttcacaacgtaaaaggaatatcttaagtttgagatggtctattccca 210  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||| ||||||| || |||||||||||    
T  31004758 cttaaaaagttaggcaaaataggatttgaagcagaatattttgcatatgaagtttcataatgtaaaaggaatatcttcagtttgatatagtctattccca 31004659  T
Q  211 tcacccacctaaaaatggagaatccttatttgtaaaaatggaaatgtctaagtagaaattactttaaagaaaacattaactatggttcagtgctgttgta 310  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| | ||||||||    
T  31004658 tcacccatctaaaaatggagaatccttatctgtaaaattggaaatgtctaagtagaaattactttaca-aaaacattaactatggttcaatactgttgta 31004560  T
Q  311 ttagaactgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||| |||||||||| ||| |    | |||| |  |||||||||||||||||||||||||||||||    
T  31004559 ttagaacagttaaagagtccca-accacacaagaaa--gcctgaacatgtgtttataagtgggggcaat 31004494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 31004827 - 31004755
Alignment:
Q  19 aacttaacacttattttagccaaagctgtttcgtagctccttcctttggtaattttctttgcagggaatctta 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31004827 aacttaacacttattttagccaaagctgtttcgtagctccttcctttggtaattttctttgcagggaatctta 31004755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 52676391 - 52676334
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    ||||||||||| ||||||||||||||||||||  |||||| |||||||||||||||||    
T  52676391 tgttaaagagtcccacattggataagagatggtatgaacaagtgtttataagtggggg 52676334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 43480337 - 43480396
Alignment:
Q  316 actgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    ||||||||||||| ||| ||||||| |||||||||||||||| ||||||| |||||||||    
T  43480337 actgttaaagagtcccatattggatgagagatggcctgaacaagtgtttacaagtggggg 43480396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 17468310 - 17468371
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| |||||| ||||||||||||| ||||  || ||||||||||||||||||||    
T  17468310 tgttaaagagtcccacatcggataagagatggtctgacaatatgtttataagtgggggcaat 17468371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 35772235 - 35772291
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| ||||||||||||  |||||||||||||||||||||||    
T  35772235 aagagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaat 35772291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 21626457 - 21626399
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggc 376  Q
    ||||||||||| ||||||  |||||||||||||||||  || |||||||||||||||||    
T  21626457 tgttaaagagtcccacatcagataagagatggcctgacaatatgtttataagtgggggc 21626399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 331 - 376
Target Start/End: Original strand, 32223742 - 32223787
Alignment:
Q  331 cacattggataagagatggcctgaacatgtgtttataagtgggggc 376  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||||    
T  32223742 cacataggataaaagatggcctgaacatgtgtttatatgtgggggc 32223787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 52907350 - 52907411
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||| ||| |||||| |||||| | ||||  ||||||||||||||||||||||||||||    
T  52907350 tgttaaatagtcccacatcggataaaatatggtttgaacatgtgtttataagtgggggcaat 52907411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 2859505 - 2859449
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| | ||||||||||  |||||||||||||||||||||||    
T  2859505 aagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaat 2859449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 17452941 - 17452885
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| |||||||| |||||||||  |||| ||||||||||||||||||    
T  17452941 aagagtcccacatcggataagacatggcctgacaatgtatttataagtgggggcaat 17452885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 379
Target Start/End: Original strand, 49142921 - 49142980
Alignment:
Q  320 ttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||| ||||||  || || | ||||| ||||||||||||||||||||||||||||    
T  49142921 ttaaagagtcccacatcagacaaaatatggcatgaacatgtgtttataagtgggggcaat 49142980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 52650882 - 52650828
Alignment:
Q  325 gagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||| |||||| ||||| ||||||||| ||  |||||||||||||||||||||||    
T  52650882 gagtcccacatcggataggagatggccggacaatgtgtttataagtgggggcaat 52650828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 12377074 - 12377021
Alignment:
Q  319 gttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgg 372  Q
    |||||||||||| ||||  || || |||||| ||||||||||||||||||||||    
T  12377074 gttaaagagttctacatcagacaaaagatggtctgaacatgtgtttataagtgg 12377021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 373
Target Start/End: Complemental strand, 42944142 - 42944093
Alignment:
Q  324 agagttccacattggataagagatggcctgaacatgtgtttataagtggg 373  Q
    ||||||||||||||||| ||| | |||||||| | |||||||||||||||    
T  42944142 agagttccacattggatgagatagggcctgaaaaagtgtttataagtggg 42944093  T

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Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 11234182 - 11234238
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggg 374  Q
    ||||||||||| ||| ||| | |  ||||||||||||||| ||||||||||||||||    
T  11234182 tgttaaagagtcccatattagttgggagatggcctgaacaagtgtttataagtgggg 11234238  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 351 - 379
Target Start/End: Original strand, 15183476 - 15183504
Alignment:
Q  351 ctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||||||||||||||||||||    
T  15183476 ctgaacatgtgtttataagtgggggcaat 15183504  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 15986446 - 15986390
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| | |||| ||||| ||||| ||||||  |||||||||||||||||||||||    
T  15986446 aagagtcctacatcggataggagatagcctgacaatgtgtttataagtgggggcaat 15986390  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 20208639 - 20208583
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| || |||| ||||  |||||||||||||||||||||||    
T  20208639 aagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggggcaat 20208583  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 25713364 - 25713420
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| | ||||| ||||  |||||||||||||||||||||||    
T  25713364 aagagtcccacatcggataggtgatggtctgacaatgtgtttataagtgggggcaat 25713420  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 26173569 - 26173513
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| ||||||  |||| ||||||| ||||  |||||||||||||||||||||||    
T  26173569 aagagtcccacatcagatatgagatggtctgacaatgtgtttataagtgggggcaat 26173513  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 39348232 - 39348176
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| ||||| ||||||  |||||||||||||||| ||||||    
T  39348232 aagagtcccacatcggataggagatagcctgacaatgtgtttataagtggaggcaat 39348176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 39808437 - 39808493
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||||||||| | ||||| ||||  |||||||||||||||||| ||||    
T  39808437 aagagtcccacattggatatgtgatggtctgacaatgtgtttataagtggggacaat 39808493  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 51459943 - 51459887
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| | |||||||| |  |||||||||||||||||||||||    
T  51459943 aagagtcccacatcggataggtgatggcctaacaatgtgtttataagtgggggcaat 51459887  T

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Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 377
Target Start/End: Original strand, 7926292 - 7926353
Alignment:
Q  316 actgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggca 377  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  7926292 actgttaaagagttccacatcggacaaaagatggcctgaacatgtgtttataagtgggggca 7926353  T

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Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 7926524 - 7926585
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| |||||| ||| || ||||||||||||||||||||| ||||||||||||||    
T  7926524 tgttaaagagtcccacatcggacaaaagatggcctgaacatgtgtttgtaagtgggggcaat 7926585  T

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Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 44118977 - 44118920
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    ||||||||||| |||||| ||||||||||||||||||  |||||||||||||||||||    
T  44118977 tgttaaagagtcccacatcggataagagatggcctgacaatgtgtttataagtggggg 44118920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 32334015 - 32333967
Alignment:
Q  331 cacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  32334015 cacattggataagagatgacctgaacatgtgtttataagtggggacaat 32333967  T

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Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 35609603 - 35609547
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||||||||  |||||||||| |||| |||||||||||||||||||||    
T  35609603 aagagtcccacattggatgggagatggcctaaacaagtgtttataagtgggggcaat 35609547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 377
Target Start/End: Complemental strand, 50870597 - 50870539
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggca 377  Q
    ||||||||||| |||||||||   |||||||||||||||| |||||||||||||||||||    
T  50870597 tgttaaagagt-ccacattggtcgagagatggcctgaacaagtgtttataagtgggggca 50870539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 337 - 379
Target Start/End: Complemental strand, 25324132 - 25324090
Alignment:
Q  337 ggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||||| ||||| |||||||||||||||||||||    
T  25324132 ggataagagatggccagaacaagtgtttataagtgggggcaat 25324090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 11056450 - 11056389
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||  |||||| ||||| |||| | ||||||||||||||||||||||| |||||    
T  11056450 tgttaaagagtctcacatttgataaaagattgtctgaacatgtgtttataagtgggagcaat 11056389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 22827509 - 22827565
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| ||||||||||||  | |||||||||||||||||||||    
T  22827509 aagagtcccacatcggataggagatggcctgacaacgtgtttataagtgggggcaat 22827565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 26549602 - 26549658
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggg 374  Q
    ||||||||||   ||||| ||||||||||||||||||  ||||||||||||||||||    
T  26549602 tgttaaagagcatcacatcggataagagatggcctgacgatgtgtttataagtgggg 26549658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 27634194 - 27634138
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| || |||||||||  |||||||||||||||||||||||    
T  27634194 aagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaat 27634138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 31254520 - 31254464
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| | ||||||||||  |||||||||||||||||||||||    
T  31254520 aagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaat 31254464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 39902676 - 39902620
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| || |||||||||  |||||||||||||||||||||||    
T  39902676 aagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaat 39902620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 369
Target Start/End: Complemental strand, 28208452 - 28208401
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataag 369  Q
    ||||||||||| |||||||||||||||||||| || |  |||||||||||||    
T  28208452 tgttaaagagtcccacattggataagagatggtctaacaatgtgtttataag 28208401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 377
Target Start/End: Original strand, 32002523 - 32002582
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggca 377  Q
    ||||||||||| |||||||| | || | ||||| ||||||| ||||||||||||||||||    
T  32002523 tgttaaagagtcccacattgaacaaaatatggcatgaacatatgtttataagtgggggca 32002582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 327 - 374
Target Start/End: Complemental strand, 38808786 - 38808739
Alignment:
Q  327 gttccacattggataagagatggcctgaacatgtgtttataagtgggg 374  Q
    |||||||||||||| ||| | ||||||||| |||||||||||||||||    
T  38808786 gttccacattggatgagataaggcctgaacttgtgtttataagtgggg 38808739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 374
Target Start/End: Original strand, 21041319 - 21041373
Alignment:
Q  320 ttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggg 374  Q
    ||||||||| |||||| ||| || ||||||||  |||||||||||||||||||||    
T  21041319 ttaaagagtcccacatcggacaaaagatggccaaaacatgtgtttataagtgggg 21041373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 377
Target Start/End: Complemental strand, 50870817 - 50870755
Alignment:
Q  315 aactgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggca 377  Q
    |||||||||||||| ||||||||| | |  |||| ||| |||| |||||||||||||||||||    
T  50870817 aactgttaaagagtcccacattggttgaacgatgtcctaaacaagtgtttataagtgggggca 50870755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 375
Target Start/End: Complemental strand, 1333623 - 1333570
Alignment:
Q  322 aaagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    ||||||| ||||||| | | |||||||||||||||| |||||| ||||||||||    
T  1333623 aaagagtcccacatttgttgagagatggcctgaacaagtgtttgtaagtggggg 1333570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 379
Target Start/End: Complemental strand, 2221066 - 2221025
Alignment:
Q  338 gataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||||| || ||||||||||| |||||||||||    
T  2221066 gataagagatggcctaaatatgtgtttataggtgggggcaat 2221025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 7572589 - 7572536
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtg 371  Q
    ||||||||||| | ||||| | | |||||||||||||||| |||||||||||||    
T  7572589 tgttaaagagtcctacattagttgagagatggcctgaacaagtgtttataagtg 7572536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 375
Target Start/End: Complemental strand, 7572796 - 7572763
Alignment:
Q  342 agagatggcctgaacatgtgtttataagtggggg 375  Q
    |||||||||||||||| |||||||||||||||||    
T  7572796 agagatggcctgaacaagtgtttataagtggggg 7572763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 12005587 - 12005526
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| |||||| ||| || | ||||| ||||||| |||| |||||||||||||||    
T  12005587 tgttaaagagtcccacatcggacaaaatatggcatgaacatttgttaataagtgggggcaat 12005526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 25323916 - 25323855
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||  |||||| || | ||||||| |||||||| ||||||||| |||||||||||    
T  25323916 tgttaaagagccccacatcggttgagagatgacctgaacaagtgtttatacgtgggggcaat 25323855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 27464366 - 27464305
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| |||||| |||||||||||  |||||  | |||||||||||||| ||||||    
T  27464366 tgttaaagagtcccacatcggataagagatttcctgacaaagtgtttataagtggaggcaat 27464305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 9279206 - 9279254
Alignment:
Q  331 cacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||| ||||| | ||||||||||  |||||||||||||||||||||||    
T  9279206 cacatcggataggtgatggcctgacaatgtgtttataagtgggggcaat 9279254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 11036859 - 11036803
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| | |||| ||||| | ||||||||||  |||||||||||||||||||||||    
T  11036859 aagagtacaacatcggataggtgatggcctgacaatgtgtttataagtgggggcaat 11036803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 26030278 - 26030334
Alignment:
Q  317 ctgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtggg 373  Q
    |||||||||| ||| |||| |||||| | ||||| ||||||||||||||||| ||||    
T  26030278 ctgttaaagaattctacatcggataaaatatggcatgaacatgtgtttataaatggg 26030334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 27634629 - 27634573
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| || |||||||||  |||||||||| ||||||||||||    
T  27634629 aagagtcccacatcggataggacatggcctgacaatgtgtttatgagtgggggcaat 27634573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 28245631 - 28245583
Alignment:
Q  331 cacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||| ||||| | ||||||||||  |||||||||||||||||||||||    
T  28245631 cacatcggataggtgatggcctgacaatgtgtttataagtgggggcaat 28245583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 35788630 - 35788686
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| ||||||  |||| || |||||||||  |||||||||||||||||||||||    
T  35788630 aagagtcccacatcagataggacatggcctgacaatgtgtttataagtgggggcaat 35788686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 35788865 - 35788921
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| |||||  | |||||||||  |||||||||||||||||||||||    
T  35788865 aagagtcccacatcggatagaacatggcctgacaatgtgtttataagtgggggcaat 35788921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 35796855 - 35796799
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||| ||| | || ||||| |||  |||||||||||||||||||||||    
T  35796855 aagagttccacatcggacaggacatggcatgacaatgtgtttataagtgggggcaat 35796799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 50543680 - 50543624
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| | ||||||||||  |||||| ||||||||||||||||    
T  50543680 aagagtcccacatcggataggtgatggcctgacaatgtgtgtataagtgggggcaat 50543624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 373
Target Start/End: Complemental strand, 50828311 - 50828271
Alignment:
Q  333 cattggataagagatggcctgaacatgtgtttataagtggg 373  Q
    |||||||| ||||||||||| |||| |||||||||||||||    
T  50828311 cattggatgagagatggcctaaacaagtgtttataagtggg 50828271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 52559546 - 52559594
Alignment:
Q  331 cacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| || ||| |||||  |||||||||||||||||||||||    
T  52559546 cacattggatatgacatgacctgacaatgtgtttataagtgggggcaat 52559594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 53815042 - 53814986
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||| || || ||| ||||||||  || ||||||||||||||||||||    
T  53815042 aagagttccacatcggttaggagttggcctgacaatttgtttataagtgggggcaat 53814986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 53828636 - 53828580
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||| || || ||| ||||||||  || ||||||||||||||||||||    
T  53828636 aagagttccacatcggttaggagttggcctgacaatttgtttataagtgggggcaat 53828580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 318 - 377
Target Start/End: Original strand, 7369690 - 7369749
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggca 377  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||    
T  7369690 tgttaaagagtcccacattggataagagatggcatgaacaagtgtttataagtgggggca 7369749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 1564686 - 1564624
Alignment:
Q  317 ctgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||| |||||| ||||||||||||| ||||  ||||| |||||||||||||||||    
T  1564686 ctgttaaagagtcccacatcggataagagatggtctgacaatgtgattataagtgggggcaat 1564624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 15438843 - 15438904
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||| ||||| ||||| ||||||| ||||  |||||||||||||||||||||||    
T  15438843 tgttaaagagtttcacatcggatatgagatggtctgataatgtgtttataagtgggggcaat 15438904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 16707131 - 16707082
Alignment:
Q  330 ccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||||||||    
T  16707131 ccacattggataaaatatgacctgaacatgtgtttataagtgggggcaat 16707082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 17150346 - 17150290
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||| |||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  17150346 aagagttcaacatcggataggagatggtctgaaaatgtgtttataagtgggggcaat 17150290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 7092120 - 7092176
Alignment:
Q  322 aaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||  ||||||||||||    
T  7092120 aaagagtcccacattggataacagatggcccgaacatgtgttta-gagtgggggcaat 7092176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 15439189 - 15439250
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| |||||||| |||||||||||  |||  |||| ||||||||||||||||||    
T  15439189 tgttaaagagtcccacattgcataagagatggtttgacaatgtatttataagtgggggcaat 15439250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 346 - 379
Target Start/End: Complemental strand, 17899550 - 17899517
Alignment:
Q  346 atggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||||||||||||||||||||||||    
T  17899550 atggcctgaacatgtgtttataagtgggggcaat 17899517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 6413531 - 6413483
Alignment:
Q  331 cacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| |||||| |||||  |||||||||||||||||||||||    
T  6413531 cacattggatatgagatgacctgacaatgtgtttataagtgggggcaat 6413483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 9368801 - 9368857
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| |||||||| |||  |||||||||||||||||||||||    
T  9368801 aagagtcccacatcggataggagatggcatgacaatgtgtttataagtgggggcaat 9368857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 33337351 - 33337295
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||||||||| | ||||||||||  || ||||||||||||||||||||    
T  33337351 aagagtcccacattggataggtgatggcctgacaatatgtttataagtgggggcaat 33337295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 349 - 379
Target Start/End: Original strand, 60084 - 60114
Alignment:
Q  349 gcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||||||||||||||||||||||    
T  60084 gcctgaacatgtgtttataagtgggggcaat 60114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 372
Target Start/End: Original strand, 1935783 - 1935837
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgg 372  Q
    ||||||| |||  |||||||||| ||||||||||||||||||| | |||||||||    
T  1935783 tgttaaaaagtctcacattggatgagagatggcctgaacatgtatctataagtgg 1935837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 379
Target Start/End: Complemental strand, 17352533 - 17352492
Alignment:
Q  338 gataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| |||||  |||||||||||||||||||||||    
T  17352533 gataagagatgacctgacaatgtgtttataagtgggggcaat 17352492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 35167513 - 35167452
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| ||||  ||| |||||||||||||| |||||  |||||||||||||| ||||||||    
T  35167513 tgttaatgagtctcacgttggataagagatgacctgacaatgtgtttataagttggggcaat 35167452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 8081227 - 8081175
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    |||||| |||||| ||||| || |||||||||  |||||||||||||||||||    
T  8081227 aagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggg 8081175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 24346614 - 24346562
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    |||||| |||||| ||||| || |||||||||  |||||||||||||||||||    
T  24346614 aagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggg 24346562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 41666870 - 41666814
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||| | || |||||||||  |||||||||||||||||||||||    
T  41666870 aagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaat 41666814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 41667106 - 41667050
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||| | || |||||||||  |||||||||||||||||||||||    
T  41667106 aagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaat 41667050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 41915137 - 41915198
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| |||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  41915137 tgttaaagagtcccacattggaaaagagatgacatgaacatgtgtttataagtgggggcaat 41915198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 45828212 - 45828273
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| |||||| ||| || ||||||||||||||||||||||||||||||||||||    
T  45828212 tgttaaagagtcccacatcggacaaaagatggcctgaacatgtgtttataagtgggggcaat 45828273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 50930667 - 50930729
Alignment:
Q  317 ctgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||| | ||||||  ||||| ||||||||| ||||||||||||||||||||||||||    
T  50930667 ctgttaaagactcccacatctgataaaagatggccttaacatgtgtttataagtgggggcaat 50930729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 47684503 - 47684559
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| ||||||||||| ||||||||||| || || ||||||||||||||||||||    
T  47684503 aagagtcccacattggatgagagatggcctaaagatatgtttataagtgggggcaat 47684559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 49629577 - 49629632
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||||||| ||||||    
T  49629577 aagagttccacattggataggagatgg-ctgaaaatgtgtttataagtggcggcaat 49629632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 30179826 - 30179769
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    ||||||||||| ||||||  ||||||||||| |||||  |||||||||||||||||||    
T  30179826 tgttaaagagtcccacatcagataagagatgacctgacaatgtgtttataagtggggg 30179769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 34221574 - 34221627
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggc 376  Q
    |||||| ||||||| ||| |||||||||| |||||| |||||||||||||||||    
T  34221574 aagagtcccacattcgatgagagatggccagaacatatgtttataagtgggggc 34221627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 35018689 - 35018738
Alignment:
Q  330 ccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||  |||||||| ||||||| ||||||||||||||||||||    
T  35018689 ccacattggatgggagatggcttgaacatatgtttataagtgggggcaat 35018738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 46853995 - 46854056
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| ||||||||||| |||||||||||||| || | ||||||| | ||||||||    
T  46853995 tgttaaagagtcccacattggatgagagatggcctgaagatatatttataactcggggcaat 46854056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 20264284 - 20264344
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaa 378  Q
    ||||||||||| |||||||||||  |||||||| |||||||| ||||| |||||| |||||    
T  20264284 tgttaaagagtcccacattggatgtgagatggcttgaacatgagtttaaaagtggtggcaa 20264344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 35038541 - 35038485
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| | ||||||||||  |||||||||||||||||||||||    
T  35038541 aagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaat 35038485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 50052884 - 50052828
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggg 374  Q
    ||||||||||| |||||| ||| || | ||||||||| |||||||||||||||||||    
T  50052884 tgttaaagagtcccacatcggacaaaatatggcctgaccatgtgtttataagtgggg 50052828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 54368487 - 54368543
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| ||||||  ||||  |||||||||||| |||||||||||||||||||||||    
T  54368487 aagagtcccacatccgatagaagatggcctgaaaatgtgtttataagtgggggcaat 54368543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 376
Target Start/End: Complemental strand, 22775509 - 22775458
Alignment:
Q  325 gagttccacattggataagagatggcctgaacatgtgtttataagtgggggc 376  Q
    |||| ||||||||||||| ||||||| |||||||||||||| | ||||||||    
T  22775509 gagtcccacattggataaaagatggcttgaacatgtgtttaaaggtgggggc 22775458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 332 - 375
Target Start/End: Original strand, 34221740 - 34221783
Alignment:
Q  332 acattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    |||||||| |||||||||||||||||| ||||||||| ||||||    
T  34221740 acattggacaagagatggcctgaacatatgtttataaatggggg 34221783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 333 - 375
Target Start/End: Complemental strand, 23610474 - 23610432
Alignment:
Q  333 cattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||    
T  23610474 cattggataagagatggtctggacaagtgtttataagtggggg 23610432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 1800181 - 1800242
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||| || |||||||| |||||||||||| ||||   ||| ||||||||||||||||||    
T  1800181 tgttaaatagctccacattagataagagatggtctgacagtgtatttataagtgggggcaat 1800242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 13575039 - 13574982
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    ||||||||||| |||||| ||| || | ||||| || |||||||||||||||||||||    
T  13575039 tgttaaagagtcccacatcggacaaaatatggcatggacatgtgtttataagtggggg 13574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 45138908 - 45138859
Alignment:
Q  330 ccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| ||||||||||||| |||   |||||||||||||||||||||||    
T  45138908 ccacatcggataagagatggtctggcaatgtgtttataagtgggggcaat 45138859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 45139089 - 45139028
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||| ||| ||||||  |||||||||||||||||  | ||||| |||||||||||||||    
T  45139089 tgttaaatagtcccacatctgataagagatggcctgacaacgtgttaataagtgggggcaat 45139028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 50052658 - 50052601
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    ||||||||||| || ||||||| || | |||||| || ||||||||||||||||||||    
T  50052658 tgttaaagagtcccgcattggacaaaatatggcccgaccatgtgtttataagtggggg 50052601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 1681690 - 1681726
Alignment:
Q  337 ggataagagatggcctgaacatgtgtttataagtggg 373  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  1681690 ggataaaagatggcctaaacatgtgtttataagtggg 1681726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 35038307 - 35038255
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    |||||| |||||| ||||| | ||||||||||  |||||||||||||||||||    
T  35038307 aagagtcccacatcggataggtgatggcctgacaatgtgtttataagtggggg 35038255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 7729907 - 7729968
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| ||||||  |||| |||||||||||| ||||||||||||||||||||||||    
T  7729907 tgttaaagagtcccacatcagatatgagatggcctgaccatgtgtttataagtgggggcaat 7729968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 379
Target Start/End: Complemental strand, 38447547 - 38447484
Alignment:
Q  316 actgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| | |||||  ||||||||||||||||||  |||||||||||||||||||||||    
T  38447547 actgttaaagaatcccacaacggataagagatggcctgacaatgtgtttataagtgggggcaat 38447484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 379
Target Start/End: Complemental strand, 42049807 - 42049744
Alignment:
Q  316 actgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||||   |||||||| || |||||||||| |||||||||||||||||||||||||    
T  42049807 actgttaaagagtcaaacattggacaaaagatggcctggacatgtgtttataagtgggggcaat 42049744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 34236766 - 34236705
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| |||||| ||||||||||||| ||||  ||||||||||||||||| |||||    
T  34236766 tgttaaagagtgccacatcggataagagatggtctgacaatgtgtttataagtgggagcaat 34236705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 12022506 - 12022454
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagt 370  Q
    ||||||||||| |||||||||||||||| |||||| |||| ||||||||||||    
T  12022506 tgttaaagagtcccacattggataagaggtggcctcaacaagtgtttataagt 12022454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 20301232 - 20301288
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||||||||| |||||||| |||  |||||||||||||||||||||||    
T  20301232 aagagtaccacattggatatgagatggcttgacaatgtgtttataagtgggggcaat 20301288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 21087864 - 21087920
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||||||||| |||||||| |||  |||||||||||||||||||||||    
T  21087864 aagagtaccacattggatatgagatggcttgacaatgtgtttataagtgggggcaat 21087920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 24532534 - 24532478
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| ||||||||||||  |||||||||||||||||||||||    
T  24532534 aagagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaat 24532478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 379
Target Start/End: Complemental strand, 37868704 - 37868640
Alignment:
Q  315 aactgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||||| |||||| ||| ||  |||||||||||||||||||||| | ||||||||||    
T  37868704 aactgttaaagagtcccacatcggacaaatgatggcctgaacatgtgtttattaatgggggcaat 37868640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 320 - 375
Target Start/End: Complemental strand, 8466604 - 8466549
Alignment:
Q  320 ttaaagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    ||||||| | |||||| ||||||||||||| ||||||| |||||||||||||||||    
T  8466604 ttaaagaatcccacatcggataagagatggtctgaacaagtgtttataagtggggg 8466549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 379
Target Start/End: Complemental strand, 8466844 - 8466781
Alignment:
Q  316 actgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||||  ||||| |||||||||||||| |||||  |||||||||||||||| ||||    
T  8466844 actgttaaagagtctcacatcggataagagatggcatgaacgagtgtttataagtggggacaat 8466781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 30953117 - 30953055
Alignment:
Q  317 ctgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||| |||||| | |||| |   ||||||||||||||||||||||||||||||||    
T  30953117 ctgttaaagagtcccacatcgaataaaaataggcctgaacatgtgtttataagtgggggcaat 30953055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 29907844 - 29907783
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| |||||| ||||||||||| | ||||  |||||||||||||||||| ||||    
T  29907844 tgttaaagagtcccacatcggataagagatagtctgacaatgtgtttataagtggggtcaat 29907783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 31079680 - 31079619
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| |||||| || ||| | ||||| ||||||||||||||||||||| ||||||    
T  31079680 tgttaaagagtcccacatcgggtaaaatatggcttgaacatgtgtttataagtggaggcaat 31079619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 322 - 379
Target Start/End: Complemental strand, 44931296 - 44931239
Alignment:
Q  322 aaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||| |||||| || | |||||||||||||| | |||||||||||||||||||||    
T  44931296 aaagagtcccacatcggttgagagatggcctgaataagtgtttataagtgggggcaat 44931239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 6462925 - 6462985
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaa 378  Q
    |||||||||||| ||||| |||||||||||| | |||  |||||||||||||||| |||||    
T  6462925 tgttaaagagtttcacatcggataagagatgacttgacaatgtgtttataagtggaggcaa 6462985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 12688278 - 12688334
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| ||||||||||||  ||||| |||||  |||||||||||||||||||||||    
T  12688278 aagagtcccacattggatagaagatgacctgacaatgtgtttataagtgggggcaat 12688334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 15042783 - 15042727
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| || |||||||||  |||||||||||||||||||||||    
T  15042783 aagagtcccacatcggatacgacatggcctgacaatgtgtttataagtgggggcaat 15042727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 35682894 - 35682838
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||| ||| | || |||||||||  |||||||||||||||||||||||    
T  35682894 aagagttccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaat 35682838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 39053042 - 39052986
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| | ||||||||||  |||||||||||||||||||||||    
T  39053042 aagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaat 39052986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 375
Target Start/End: Original strand, 39960162 - 39960214
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    |||||| |||||| ||||| ||||||||||||| || ||||||||||||||||    
T  39960162 aagagtcccacatcggataggagatggcctgaaaatttgtttataagtggggg 39960214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 4873808 - 4873755
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtg 371  Q
    |||||||||||  ||||| |||||||||||| |||||  |||||||||||||||    
T  4873808 tgttaaagagtggcacatcggataagagatgacctgacaatgtgtttataagtg 4873755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 37868466 - 37868405
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||   |||| ||||||  ||||||||||||| |||||||| ||||||||||||    
T  37868466 tgttaaagagtcgaacatcggataaatgatggcctgaacacgtgtttattagtgggggcaat 37868405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 375
Target Start/End: Original strand, 6541885 - 6541937
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    |||||| ||||||||||   ||||||||||||||| ||| |||||||||||||    
T  6541885 aagagtcccacattggaagtgagatggcctgaacaagtgcttataagtggggg 6541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 11232307 - 11232251
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||| | || |||||||||  |||||||||||||||||||||||    
T  11232307 aagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaat 11232251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 28069470 - 28069414
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| || |||||||||  |||| ||||||||||||||||||    
T  28069470 aagagtcccacatcggatatgacatggcctgacaatgtatttataagtgggggcaat 28069414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 39052650 - 39052594
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| ||||||  |||| | ||||||||||  |||||||||||||||||||||||    
T  39052650 aagagtcccacatcagataggtgatggcctgacaatgtgtttataagtgggggcaat 39052594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 47849537 - 47849598
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| |||||| |||||| ||||||| ||||||||||||||||||| ||||||||    
T  47849537 tgttaaagagtgccacatcggataaaagatggcatgaacatgtgtttataagttggggcaat 47849598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 15317531 - 15317579
Alignment:
Q  330 ccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  15317531 ccacattggataaaagatggcctga-catgtgtttataagtgggggcaat 15317579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 32292484 - 32292543
Alignment:
Q  318 tgttaaagagttccacattggataagag-atggcctgaacatgtgtttataagtgggggc 376  Q
    |||||||||||  ||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  32292484 tgttaaagagtctcacatcggataagagtatggcctgaacaagtgtttataagtgggggc 32292543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 18826601 - 18826549
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    |||||| |||||||||||| |||||| |||||  |||||||||||||||||||    
T  18826601 aagagtcccacattggataggagatgacctgacaatgtgtttataagtggggg 18826549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 21861500 - 21861556
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||| ||| | || |||||||||  |||||||||||||||||||||||    
T  21861500 aagagttccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaat 21861556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 43688272 - 43688216
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| || |||||||||  |||||||||||||||||||||||    
T  43688272 aagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaat 43688216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 48243550 - 48243494
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||||| ||| | ||||||||||  |||||||||||||||||||||||    
T  48243550 aagagtcccacattgaatatgtgatggcctgacaatgtgtttataagtgggggcaat 48243494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 341 - 379
Target Start/End: Original strand, 474739 - 474777
Alignment:
Q  341 aagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  474739 aagagatggcctgaacaagtgttcataagtgggggcaat 474777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 377
Target Start/End: Original strand, 33515670 - 33515724
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggca 377  Q
    |||||| ||||||||||| ||| | |||||||  |||||||||||||||||||||    
T  33515670 aagagtcccacattggatgagataaggcctgataatgtgtttataagtgggggca 33515724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 32879733 - 32879676
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    |||||| |||| |||| | || |||||||||||||||  |||||||||||||||||||    
T  32879733 tgttaatgagtcccacttcggttaagagatggcctgacaatgtgtttataagtggggg 32879676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 2404287 - 2404231
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| || || ||||||| ||||  |||||||||||||||||||||||    
T  2404287 aagagtcccacatcggttaggagatggactgacaatgtgtttataagtgggggcaat 2404231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 3519838 - 3519786
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    |||||| |||||| ||||| | ||||||||||  |||||||||||||||||||    
T  3519838 aagagtcccacatcggataggtgatggcctgacaatgtgtttataagtggggg 3519786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 11211796 - 11211740
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggg 374  Q
    ||||||||||| |||| | |||||||||||||||| |  |||| |||||||||||||    
T  11211796 tgttaaagagtcccacgtcggataagagatggcctaacaatgtctttataagtgggg 11211740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 17202150 - 17202206
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| || |||||| ||||||||  || ||||||||||||||||||||    
T  17202150 aagagtcccacatcggttaagagttggcctgacaatttgtttataagtgggggcaat 17202206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 29469576 - 29469632
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||| | || |||||||||  |||||||||||||||||||||||    
T  29469576 aagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaat 29469632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 29469811 - 29469867
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||| | || |||||||||  |||||||||||||||||||||||    
T  29469811 aagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaat 29469867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 31485537 - 31485481
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| ||||||  |||| | ||||||||||  |||||||||||||||||||||||    
T  31485537 aagagtcccacataagatatgtgatggcctgacaatgtgtttataagtgggggcaat 31485481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 36277331 - 36277283
Alignment:
Q  331 cacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||| ||| |||| |||||||||  |||||||||||||||||||||||    
T  36277331 cacatcggacaagacatggcctgacaatgtgtttataagtgggggcaat 36277283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 351 - 379
Target Start/End: Complemental strand, 40899007 - 40898979
Alignment:
Q  351 ctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||||||||||||||||||||    
T  40899007 ctgaacatgtgtttataagtgggggcaat 40898979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 48417636 - 48417580
Alignment:
Q  315 aactgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtg 371  Q
    |||| ||||||||| ||| ||||| |  ||||||||||||||| |||||||||||||    
T  48417636 aactattaaagagtcccagattggtttggagatggcctgaacaagtgtttataagtg 48417580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 6543056 - 6543000
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||| ||||||||||||| ||||  |||||||||||||||||||||||    
T  6543056 aagagttccacatcggataagagatggtctgacaatgtgtttataagtgggggcaat 6543000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 2736515 - 2736459
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||| ||||| |||||| |||||  |||||||||||||||||||||||    
T  2736515 aagagttccacatcggatatgagatgacctgataatgtgtttataagtgggggcaat 2736459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 2737283 - 2737227
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||| ||||| |||||| |||||  |||||||||||||||||||||||    
T  2737283 aagagttccacatcggatatgagatgacctgataatgtgtttataagtgggggcaat 2737227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 9601944 - 9601888
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggg 374  Q
    ||||| ||||| ||||||||||| ||||||| |||||||||||||||| ||||||||    
T  9601944 tgttatagagtcccacattggatgagagatgacctgaacatgtgtttaaaagtgggg 9601888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 33494510 - 33494566
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| |||||||| |||| || ||||||||||||||||||||    
T  33494510 aagagtcccacatcggataggagatggcttgaaaatatgtttataagtgggggcaat 33494566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 373
Target Start/End: Complemental strand, 24837167 - 24837117
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtggg 373  Q
    |||||| ||||||||||||| ||||||| |||| ||| |||||||||||||    
T  24837167 aagagtcccacattggataatagatggcatgaaaatgagtttataagtggg 24837117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 466367 - 466318
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttata 367  Q
    ||||||||||| ||||||||||| ||| |||||||||  |||||||||||    
T  466367 tgttaaagagtcccacattggatgagatatggcctgacaatgtgtttata 466318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 3823270 - 3823331
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||  ||||| |||||||||||| |||||  || ||||||||||||||| ||||    
T  3823270 tgttaaagagtctcacatcggataagagatgacctgataatttgtttataagtggggacaat 3823331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 12319789 - 12319732
Alignment:
Q  321 taaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaa 378  Q
    ||||||||  |||||| ||||||||||| | |||  ||||||||||||||||||||||    
T  12319789 taaagagtctcacattagataagagatgacatgacaatgtgtttataagtgggggcaa 12319732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 16570125 - 16570182
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtggggg 375  Q
    ||||||||||| ||||||  ||||||||||| |||||  ||||||||||||| |||||    
T  16570125 tgttaaagagtaccacataagataagagatgtcctgacaatgtgtttataagcggggg 16570182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 19639219 - 19639170
Alignment:
Q  330 ccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||||| |||||||||  |||||||||||||||||| ||||    
T  19639219 ccacataggataagatatggcctgacaatgtgtttataagtggggacaat 19639170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 3680217 - 3680273
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| | ||||| ||||  |||||||||||||||||||||||    
T  3680217 aagagtcccacatcggatatgtgatggtctgacaatgtgtttataagtgggggcaat 3680273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 4868690 - 4868634
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||| | || |||||||||  |||||||||||||||||||||||    
T  4868690 aagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaat 4868634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 4906777 - 4906833
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||| ||||||||||| | | ||  ||||||||||||||| |||||||    
T  4906777 aagagttccacatcggataagagattgtcggacaatgtgtttataagtgagggcaat 4906833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 6237815 - 6237759
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||||||||||| || |||||||  |||| |||||||||| |||||||    
T  6237815 aagagtcccacattggataagtgaaggcctgacaatgtatttataagtgagggcaat 6237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 12199918 - 12199862
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| |||||||| |||| ||||  || ||||||||||||||||||||    
T  12199918 aagagtcccacatcggataagatatggtctgacaatatgtttataagtgggggcaat 12199862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 13353172 - 13353228
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||| | || |||||||||  |||||||||||||||||||||||    
T  13353172 aagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaat 13353228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 19712923 - 19712979
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||||| || || ||| ||||||||  || ||||||||||||||||||||    
T  19712923 aagagttccacatcggttaggagttggcctgacaatttgtttataagtgggggcaat 19712979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 31961149 - 31961205
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| ||||||  |||| | ||||||||||  |||||||||||||||||||||||    
T  31961149 aagagtcccacatcagatatgtgatggcctgacaatgtgtttataagtgggggcaat 31961205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 31996931 - 31996875
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggg 374  Q
    |||||||||||  ||||| |||||| ||||| | ||| |||||||||||||||||||    
T  31996931 tgttaaagagtcacacataggataaaagatgtcatgaccatgtgtttataagtgggg 31996875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 33796297 - 33796353
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||| | || |||||||||  |||||||||||||||||||||||    
T  33796297 aagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaat 33796353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000009; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 8227328 - 8227376
Alignment:
Q  331 cacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  8227328 cacattggatgagagatggcatgaacaagtgtttataagtgggggcaat 8227376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 33606167 - 33606111
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| ||||||||||||| |||||||||||||| ||||||||    
T  33606167 aagagtcccacatcggataggagatggcctgaaaatgtgtttataagtaggggcaat 33606111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 14927071 - 14927129
Alignment:
Q  321 taaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||  ||||| |||||||||||| |||||  |||||||||||||||||||||||    
T  14927071 taaagagtcacacatcggataagagatgacctgacaatgtgtttataagtgggggcaat 14927129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 17719371 - 17719427
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| | ||||||||||  |||||||||||||||||||||||    
T  17719371 aagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaat 17719427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 37812611 - 37812555
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| |||||||| ||| |||||  |||||||||||||||||||||||    
T  37812611 aagagtcccacatcggataagacatgacctgacaatgtgtttataagtgggggcaat 37812555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 37840308 - 37840364
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||||||||| |||||| |||||  |||||||||||||||| ||||||    
T  37840308 aagagtcccacattggataggagatgacctgacaatgtgtttataagtggaggcaat 37840364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 13210491 - 13210553
Alignment:
Q  317 ctgttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||| |||||||| || |||||||||||||||   |||||||||| | |||||||    
T  13210491 ctgttaaagagtcccacattgaatgagagatggcctgaacgaatgtttataagagagggcaat 13210553  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 94133 - 94077
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| | ||||||||||   ||||||||||||||||||||||    
T  94133 aagagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaat 94077  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 5711552 - 5711496
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||| | || |||||||||  |||||||||||||||||||||||    
T  5711552 aagagtcccacatcggaaaggaaatggcctgacaatgtgtttataagtgggggcaat 5711496  T

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Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 5711788 - 5711732
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||| | || |||||||||  |||||||||||||||||||||||    
T  5711788 aagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaat 5711732  T

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Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 10523219 - 10523271
Alignment:
Q  318 tgttaaagagttccacattggataagagatggcctgaacatgtgtttataagt 370  Q
    ||||||||||| |||||| ||||||||||||| ||||  |||||||| |||||    
T  10523219 tgttaaagagtcccacatcggataagagatggtctgacaatgtgtttttaagt 10523271  T

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Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 332 - 379
Target Start/End: Original strand, 14522837 - 14522882
Alignment:
Q  332 acattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||||||| |||||   ||||||||||||||||||||||||||||    
T  14522837 acattggataaaagatga--tgaacatgtgtttataagtgggggcaat 14522882  T

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Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 379
Target Start/End: Original strand, 15988380 - 15988439
Alignment:
Q  319 gttaaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||| |||||| ||| || ||| ||| |||||||||| |||||||||||||||||    
T  15988380 gttaaagagtcccacatcggacaaaagaaggcttgaacatgtg-ttataagtgggggcaat 15988439  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 16419473 - 16419529
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| || |||| ||||  |||||||||||||||||||||||    
T  16419473 aagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggggcaat 16419529  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 351 - 379
Target Start/End: Complemental strand, 19571059 - 19571031
Alignment:
Q  351 ctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||||||||||||||||||||    
T  19571059 ctgaacatgtgtttataagtgggggcaat 19571031  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 31700861 - 31700805
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    ||||||| ||||| ||||| | ||||||||||  ||||||||||||||| |||||||    
T  31700861 aagagttacacatcggataggtgatggcctgacaatgtgtttataagtgagggcaat 31700805  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 37812381 - 37812325
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| || |||||||||  |||||||||||||||||| ||||    
T  37812381 aagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggacaat 37812325  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 40379322 - 40379266
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| | ||||||||||   ||||||||||||||||||||||    
T  40379322 aagagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaat 40379266  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 40379557 - 40379501
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||||| | ||||||||||   ||||||||||||||||||||||    
T  40379557 aagagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaat 40379501  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 377
Target Start/End: Original strand, 429844 - 429898
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggca 377  Q
    |||||| |||||| ||||| | ||||||||||  |||||||||||||||||||||    
T  429844 aagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggca 429898  T

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Target: scaffold0224 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 373
Target Start/End: Original strand, 26832 - 26881
Alignment:
Q  324 agagttccacattggataagagatggcctgaacatgtgtttataagtggg 373  Q
    ||||||||||||||||| ||| | |||||||| | |||||||||||||||    
T  26832 agagttccacattggatgagatagggcctgaaaaagtgtttataagtggg 26881  T

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Target: scaffold0766 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 6245 - 6301
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| ||||||  |||||||||| | ||||  |||||||||||||||||||||||    
T  6245 aagagtcccacatcagataagagatagtctgacaatgtgtttataagtgggggcaat 6301  T

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Target: scaffold0692 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 5867 - 5811
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| |||||||| || | ||||  |||||||||||||||||||||||    
T  5867 aagagtcccacatcggataagacatagtctgacaatgtgtttataagtgggggcaat 5811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 2122 - 2178
Alignment:
Q  323 aagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaat 379  Q
    |||||| |||||| ||| | || |||||||||  |||||||||||||||||||||||    
T  2122 aagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaat 2178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 351 - 379
Target Start/End: Original strand, 67277 - 67305
Alignment:
Q  351 ctgaacatgtgtttataagtgggggcaat 379  Q
    |||||||||||||||||||||||||||||    
T  67277 ctgaacatgtgtttataagtgggggcaat 67305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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