View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20613_low_9 (Length: 273)
Name: NF20613_low_9
Description: NF20613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20613_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 12 - 258
Target Start/End: Original strand, 27139127 - 27139373
Alignment:
| Q |
12 |
atgaatcatgacatggcaaaccaagtgcatggagtttccatgctttcatggggtatgaaagtattttgagaatgtaaaacaaacaaaaagtaaccaaaaa |
111 |
Q |
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| T |
27139127 |
atgaatcatgacatggcaaaccaagtgcatggagtttccatgctttcatggggtatgaaagtattttgagaatgtaaaacaaacaaaaagtaaccaaaaa |
27139226 |
T |
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| Q |
112 |
gaagttataagtggtaacatgtcacacacaatggaaagaataaagataacgaaggtgttatttacaacacaaaagcttctatatgaattgacatatgctt |
211 |
Q |
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| T |
27139227 |
gaagttataagtggtaacatgtcacacacaatggaaagaataaagataacgaaggtgttatttacaacacaaaagcttctatatgaattgacatatgctt |
27139326 |
T |
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| Q |
212 |
tgcaaggaaggatctaaaggttccataaatttattgtgctatatagt |
258 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27139327 |
tgcaaggaaggatctaaaggttccataaatttattgtgctatatagt |
27139373 |
T |
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