View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20614_low_17 (Length: 221)

Name: NF20614_low_17
Description: NF20614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20614_low_17
NF20614_low_17
[»] chr1 (46 HSPs)
chr1 (79-198)||(28560860-28560979)
chr1 (1-80)||(31651708-31651787)
chr1 (1-82)||(12685734-12685815)
chr1 (2-80)||(38786753-38786831)
chr1 (1-80)||(5117241-5117320)
chr1 (1-80)||(23393414-23393493)
chr1 (1-81)||(8048554-8048634)
chr1 (1-69)||(23337988-23338056)
chr1 (1-73)||(44452378-44452450)
chr1 (5-81)||(47912467-47912543)
chr1 (1-80)||(26476816-26476895)
chr1 (1-80)||(31931986-31932065)
chr1 (1-80)||(44963479-44963558)
chr1 (6-80)||(40058774-40058848)
chr1 (1-82)||(28490342-28490423)
chr1 (1-82)||(41855527-41855607)
chr1 (5-82)||(44240705-44240782)
chr1 (5-82)||(48312214-48312291)
chr1 (1-71)||(48613897-48613967)
chr1 (1-82)||(5606196-5606277)
chr1 (1-73)||(1821443-1821515)
chr1 (1-69)||(40883592-40883660)
chr1 (1-69)||(43452983-43453051)
chr1 (1-80)||(26544050-26544129)
chr1 (1-80)||(41414385-41414464)
chr1 (1-80)||(44741525-44741604)
chr1 (1-80)||(48389249-48389328)
chr1 (1-75)||(7075142-7075216)
chr1 (5-82)||(10100318-10100395)
chr1 (5-81)||(9334567-9334643)
chr1 (5-81)||(9358340-9358416)
chr1 (8-80)||(29253627-29253699)
chr1 (1-80)||(8250650-8250729)
chr1 (5-80)||(10124295-10124370)
chr1 (1-80)||(45299501-45299580)
chr1 (32-80)||(6871062-6871110)
chr1 (1-73)||(25815710-25815782)
chr1 (1-80)||(50014368-50014447)
chr1 (1-69)||(52141871-52141939)
chr1 (5-65)||(52688717-52688777)
chr1 (1-80)||(2138836-2138915)
chr1 (1-80)||(36035868-36035947)
chr1 (1-51)||(4489243-4489293)
chr1 (1-42)||(3138774-3138815)
chr1 (1-82)||(49903491-49903572)
chr1 (1-69)||(10648017-10648084)
[»] scaffold0500 (1 HSPs)
scaffold0500 (1-81)||(479-559)
[»] chr4 (45 HSPs)
chr4 (1-82)||(29821232-29821313)
chr4 (1-80)||(37164199-37164278)
chr4 (1-80)||(4271816-4271895)
chr4 (1-77)||(1981186-1981262)
chr4 (1-80)||(2805973-2806052)
chr4 (1-80)||(28988196-28988275)
chr4 (1-82)||(1377990-1378071)
chr4 (2-82)||(37588330-37588410)
chr4 (1-80)||(24505693-24505772)
chr4 (1-80)||(39376670-39376749)
chr4 (1-80)||(44210331-44210410)
chr4 (1-80)||(47833946-47834025)
chr4 (1-81)||(51306035-51306115)
chr4 (1-80)||(23605704-23605783)
chr4 (5-80)||(50685106-50685181)
chr4 (5-82)||(51716717-51716794)
chr4 (1-77)||(11260884-11260960)
chr4 (1-69)||(24334191-24334259)
chr4 (1-81)||(28898872-28898952)
chr4 (2-78)||(42185457-42185533)
chr4 (1-81)||(46608396-46608476)
chr4 (1-80)||(1615721-1615800)
chr4 (1-80)||(6520617-6520696)
chr4 (1-80)||(17492849-17492928)
chr4 (1-80)||(48380938-48381017)
chr4 (2-80)||(48079850-48079928)
chr4 (1-74)||(39260534-39260607)
chr4 (1-82)||(39332630-39332711)
chr4 (1-82)||(43447347-43447428)
chr4 (5-73)||(28909649-28909717)
chr4 (1-80)||(3708435-3708514)
chr4 (1-80)||(28914550-28914629)
chr4 (1-80)||(31657159-31657238)
chr4 (4-70)||(54802870-54802936)
chr4 (1-50)||(1613050-1613099)
chr4 (1-80)||(8525218-8525297)
chr4 (1-80)||(10385030-10385109)
chr4 (5-80)||(31152847-31152922)
chr4 (1-80)||(40411410-40411489)
chr4 (1-80)||(48652654-48652733)
chr4 (1-80)||(55631677-55631756)
chr4 (5-53)||(21045050-21045098)
chr4 (1-80)||(37667576-37667655)
chr4 (1-80)||(39171140-39171219)
chr4 (33-74)||(37381033-37381074)
[»] chr8 (42 HSPs)
chr8 (1-80)||(27302044-27302123)
chr8 (1-81)||(8496685-8496765)
chr8 (1-81)||(38036657-38036737)
chr8 (1-80)||(29616126-29616205)
chr8 (1-80)||(44887515-44887594)
chr8 (5-80)||(44947191-44947266)
chr8 (1-82)||(17523985-17524066)
chr8 (2-80)||(14583721-14583799)
chr8 (1-82)||(44362103-44362184)
chr8 (1-81)||(11756960-11757040)
chr8 (1-72)||(67277-67348)
chr8 (5-80)||(20671442-20671517)
chr8 (1-80)||(43049069-43049148)
chr8 (1-79)||(37094314-37094392)
chr8 (1-75)||(44040007-44040081)
chr8 (1-80)||(11538871-11538950)
chr8 (1-80)||(21132728-21132807)
chr8 (1-80)||(28583102-28583181)
chr8 (1-80)||(40645864-40645943)
chr8 (1-74)||(1645212-1645285)
chr8 (1-82)||(3466468-3466549)
chr8 (1-81)||(761732-761812)
chr8 (1-80)||(14378487-14378566)
chr8 (1-80)||(32909237-32909316)
chr8 (2-80)||(30653544-30653622)
chr8 (1-81)||(38842345-38842425)
chr8 (5-73)||(44871517-44871585)
chr8 (1-80)||(4960333-4960412)
chr8 (17-80)||(8058405-8058468)
chr8 (1-80)||(30464614-30464693)
chr8 (1-78)||(18419180-18419257)
chr8 (1-66)||(40035469-40035534)
chr8 (1-73)||(14512022-14512094)
chr8 (1-80)||(29917728-29917807)
chr8 (2-80)||(2026755-2026832)
chr8 (4-53)||(44717480-44717529)
chr8 (17-81)||(8123836-8123900)
chr8 (1-80)||(23437613-23437692)
chr8 (1-80)||(29708743-29708822)
chr8 (1-75)||(25866251-25866325)
chr8 (1-82)||(23547250-23547331)
chr8 (5-57)||(4326942-4326994)
[»] chr7 (33 HSPs)
chr7 (1-80)||(5842300-5842379)
chr7 (1-80)||(25571495-25571574)
chr7 (1-81)||(26651050-26651130)
chr7 (5-82)||(37099677-37099754)
chr7 (4-80)||(47713235-47713311)
chr7 (1-63)||(9173156-9173218)
chr7 (17-79)||(18756787-18756848)
chr7 (1-75)||(41007765-41007839)
chr7 (1-82)||(38353399-38353480)
chr7 (1-69)||(3123960-3124028)
chr7 (1-80)||(28016593-28016671)
chr7 (1-80)||(29247809-29247888)
chr7 (1-80)||(48448700-48448779)
chr7 (1-80)||(16806949-16807028)
chr7 (1-80)||(32972138-32972217)
chr7 (1-80)||(35693633-35693712)
chr7 (2-80)||(38069234-38069312)
chr7 (1-66)||(19817517-19817582)
chr7 (1-53)||(31496477-31496529)
chr7 (4-80)||(36820061-36820137)
chr7 (6-80)||(40232414-40232488)
chr7 (2-80)||(41844953-41845031)
chr7 (1-82)||(32345584-32345665)
chr7 (5-66)||(40818512-40818573)
chr7 (1-80)||(19327497-19327576)
chr7 (2-57)||(46242304-46242359)
chr7 (1-67)||(4620246-4620312)
chr7 (1-82)||(38259662-38259743)
chr7 (1-80)||(25273820-25273899)
chr7 (1-80)||(27621098-27621177)
chr7 (5-80)||(36404730-36404804)
chr7 (1-80)||(38441995-38442074)
chr7 (2-82)||(42493813-42493893)
[»] chr3 (48 HSPs)
chr3 (1-81)||(33462887-33462967)
chr3 (1-80)||(2643068-2643147)
chr3 (1-80)||(9997678-9997757)
chr3 (1-80)||(10228527-10228606)
chr3 (1-80)||(43394357-43394436)
chr3 (1-80)||(49818939-49819018)
chr3 (5-81)||(32961432-32961508)
chr3 (3-75)||(52093897-52093969)
chr3 (1-80)||(10106182-10106261)
chr3 (1-80)||(34680364-34680443)
chr3 (1-64)||(36594232-36594295)
chr3 (1-87)||(29588557-29588643)
chr3 (1-82)||(4945647-4945728)
chr3 (1-81)||(29809526-29809606)
chr3 (1-80)||(10232283-10232362)
chr3 (1-84)||(14750854-14750937)
chr3 (1-80)||(28958797-28958876)
chr3 (2-82)||(1778544-1778623)
chr3 (1-80)||(4228986-4229065)
chr3 (1-80)||(4465063-4465142)
chr3 (1-80)||(26759660-26759739)
chr3 (1-80)||(42098425-42098504)
chr3 (2-67)||(1334109-1334174)
chr3 (2-82)||(29793174-29793254)
chr3 (1-80)||(12948222-12948301)
chr3 (1-80)||(29455506-29455585)
chr3 (1-80)||(29720577-29720656)
chr3 (1-80)||(44821332-44821411)
chr3 (1-82)||(43170156-43170236)
chr3 (1-62)||(53020010-53020071)
chr3 (2-58)||(43399009-43399065)
chr3 (1-80)||(900886-900965)
chr3 (1-56)||(3817905-3817960)
chr3 (1-80)||(16434655-16434734)
chr3 (1-80)||(34263502-34263581)
chr3 (1-80)||(34555333-34555412)
chr3 (1-76)||(36364566-36364640)
chr3 (1-56)||(47339906-47339961)
chr3 (1-82)||(50673859-50673940)
chr3 (6-63)||(52092980-52093037)
chr3 (1-64)||(18013284-18013347)
chr3 (1-80)||(34669790-34669869)
chr3 (5-80)||(46866529-46866604)
chr3 (5-80)||(47070208-47070283)
chr3 (1-80)||(49220654-49220733)
chr3 (1-55)||(31440455-31440509)
chr3 (1-82)||(49076222-49076303)
chr3 (1-81)||(38878275-38878355)
[»] scaffold0283 (1 HSPs)
scaffold0283 (5-80)||(3169-3244)
[»] chr2 (34 HSPs)
chr2 (1-74)||(2831890-2831963)
chr2 (1-85)||(16646428-16646512)
chr2 (1-80)||(37317058-37317137)
chr2 (1-82)||(20682824-20682905)
chr2 (1-77)||(7601202-7601278)
chr2 (1-80)||(6729905-6729984)
chr2 (2-81)||(8896454-8896532)
chr2 (1-80)||(15177551-15177630)
chr2 (1-81)||(40471918-40471998)
chr2 (1-81)||(41575744-41575824)
chr2 (5-80)||(25627209-25627284)
chr2 (1-82)||(10333378-10333459)
chr2 (5-74)||(44022454-44022523)
chr2 (1-80)||(16125885-16125964)
chr2 (1-80)||(41319726-41319805)
chr2 (2-80)||(16127583-16127661)
chr2 (1-87)||(20917722-20917808)
chr2 (2-64)||(45036546-45036608)
chr2 (1-78)||(22718347-22718424)
chr2 (1-82)||(42754155-42754236)
chr2 (1-80)||(8373616-8373695)
chr2 (1-80)||(16333661-16333740)
chr2 (1-80)||(31603219-31603298)
chr2 (1-80)||(41437014-41437093)
chr2 (1-81)||(11383846-11383926)
chr2 (1-80)||(5096430-5096509)
chr2 (1-80)||(7724412-7724491)
chr2 (1-64)||(18504654-18504717)
chr2 (1-51)||(26436518-26436568)
chr2 (1-57)||(4137591-4137647)
chr2 (1-69)||(31644147-31644215)
chr2 (5-69)||(43328615-43328678)
chr2 (1-51)||(9273799-9273849)
chr2 (5-65)||(6075311-6075369)
[»] chr5 (45 HSPs)
chr5 (1-80)||(26801904-26801983)
chr5 (1-80)||(26809454-26809533)
chr5 (1-80)||(26824481-26824560)
chr5 (1-80)||(27674399-27674478)
chr5 (2-80)||(27675723-27675801)
chr5 (1-80)||(1831246-1831325)
chr5 (1-80)||(10465098-10465177)
chr5 (1-80)||(40316713-40316792)
chr5 (1-80)||(41410749-41410828)
chr5 (1-81)||(2805980-2806060)
chr5 (1-80)||(6734964-6735043)
chr5 (1-80)||(9936691-9936770)
chr5 (1-80)||(40796875-40796954)
chr5 (5-75)||(20502856-20502926)
chr5 (1-71)||(39925386-39925456)
chr5 (1-66)||(30788387-30788452)
chr5 (1-73)||(967376-967448)
chr5 (1-81)||(2799814-2799894)
chr5 (5-77)||(4152116-4152188)
chr5 (1-80)||(1918633-1918712)
chr5 (5-80)||(41042640-41042715)
chr5 (1-87)||(1780941-1781027)
chr5 (1-82)||(14607359-14607440)
chr5 (1-82)||(31190978-31191059)
chr5 (1-74)||(40080163-40080236)
chr5 (1-81)||(20023042-20023122)
chr5 (5-77)||(34170015-34170087)
chr5 (5-80)||(19344502-19344577)
chr5 (1-80)||(20040218-20040297)
chr5 (1-80)||(30721488-30721567)
chr5 (2-80)||(14355682-14355760)
chr5 (1-82)||(14057890-14057971)
chr5 (1-82)||(32110443-32110524)
chr5 (1-74)||(32473832-32473905)
chr5 (1-80)||(1831532-1831611)
chr5 (1-64)||(33402410-33402473)
chr5 (1-80)||(40316999-40317078)
chr5 (5-51)||(39104111-39104157)
chr5 (1-66)||(39035742-39035807)
chr5 (1-53)||(14639545-14639597)
chr5 (1-81)||(41262931-41263011)
chr5 (1-80)||(14633189-14633268)
chr5 (5-52)||(40365719-40365766)
chr5 (1-80)||(41410463-41410542)
chr5 (1-82)||(1098357-1098438)
[»] chr6 (24 HSPs)
chr6 (1-80)||(35117458-35117537)
chr6 (1-70)||(4889943-4890012)
chr6 (1-81)||(2397952-2398032)
chr6 (1-73)||(10105993-10106065)
chr6 (1-80)||(33347944-33348023)
chr6 (1-82)||(16661406-16661487)
chr6 (1-82)||(16969561-16969642)
chr6 (1-70)||(24949854-24949923)
chr6 (1-80)||(6142314-6142393)
chr6 (1-80)||(29514834-29514913)
chr6 (1-81)||(2141750-2141830)
chr6 (1-80)||(995745-995824)
chr6 (1-80)||(2667132-2667211)
chr6 (1-80)||(17496135-17496214)
chr6 (1-82)||(2913079-2913160)
chr6 (9-70)||(31948460-31948521)
chr6 (2-82)||(6188461-6188541)
chr6 (5-80)||(31709078-31709153)
chr6 (1-66)||(10109232-10109297)
chr6 (1-57)||(2656500-2656556)
chr6 (1-80)||(24798353-24798432)
chr6 (1-80)||(24825347-24825426)
chr6 (1-80)||(32673930-32674009)
chr6 (5-73)||(12677166-12677234)
[»] scaffold1248 (1 HSPs)
scaffold1248 (4-77)||(1262-1335)
[»] scaffold0952 (1 HSPs)
scaffold0952 (4-77)||(978-1051)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-74)||(19544-19617)
[»] scaffold0385 (1 HSPs)
scaffold0385 (1-77)||(2026-2102)
[»] scaffold0195 (1 HSPs)
scaffold0195 (1-80)||(48-127)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-80)||(5558-5637)
[»] scaffold0281 (1 HSPs)
scaffold0281 (1-82)||(13287-13368)
[»] scaffold0717 (1 HSPs)
scaffold0717 (20-79)||(4017-4076)
[»] scaffold0289 (1 HSPs)
scaffold0289 (1-80)||(9305-9384)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-80)||(184148-184227)


Alignment Details
Target: chr1 (Bit Score: 116; Significance: 4e-59; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 79 - 198
Target Start/End: Original strand, 28560860 - 28560979
Alignment:
Q  79 taatgaaatgtaatgttaaacaatttaatgtcgcaaatggaatgtatgtctacatatgtacactgcttgggcaatatctcaaactcaatatataactcta 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28560860 taatgaaatgtaatgttaaacaatttaatgtcgcaaatggaatgtatgtctacatatgtacactgcttgggcaatatctcaaactcaatatataactcta 28560959  T
Q  179 ccaaaaagaaatgtgtttaa 198  Q
    ||||||| ||||||||||||    
T  28560960 ccaaaaaaaaatgtgtttaa 28560979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 31651787 - 31651708
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  31651787 caagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatttattatgggacggagggagta 31651708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12685815 - 12685734
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  12685815 caagatatttaagctcaaaattatgcattgacatgtgtaataaggtcaactgtgtcaagtattataggacggagggagtaat 12685734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 38786831 - 38786753
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||| || ||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38786831 aagatatttaaactcaaaattatgtattgatatgcgtaatagggtcaattgtgtcatgtattatgggacggagggagta 38786753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 5117320 - 5117241
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||| |||||||||||||||||||||| | |||||||||||| |||||| |||||||||||||||    
T  5117320 caagatatttaagctcaaagttatgcattgacatgcgtaataagttcaactgtgtcaagtattaagggacggagggagta 5117241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 23393414 - 23393493
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| |||||||||||||| |||||||||| | |||||||||||||| ||||| |||||||||||||||    
T  23393414 caagatatttaagctcaaaattatgcattggcatgcgtaattgagtcaactgtgtcatttattaagggacggagggagta 23393493  T

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Target: chr1; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8048634 - 8048554
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    ||||||||||||||| |||| |||||||||  ||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  8048634 caagatatttaagctcaaaaatatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacggagggagtaa 8048554  T

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Target: chr1; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23337988 - 23338056
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatggga 69  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  23337988 caagatatttaaactcaaaattatgcattgacatgcgtaatatggtcaactgtatcatgtattatggga 23338056  T

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Target: chr1; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 44452378 - 44452450
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacgga 73  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |||||| |||||||||||||||| ||||||    
T  44452378 caagatatttaagctcaaaattatgcattaacatgcgtaataaggtcaattgtgtcatgtattatgagacgga 44452450  T

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Target: chr1; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 47912467 - 47912543
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||| |||| || |||||||||||||||||||||||    
T  47912467 atatttaagctcaaaattatgcattgacatacgtaataaggtcaattgtggcaagtattatgggacggagggagtaa 47912543  T

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Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26476895 - 26476816
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||||| |||||||||||||||| |||||||||||||| |||||| || ||||||||||||    
T  26476895 caagatatttaaactcaaaattatgtattgacatgcgtaataaggtcaactgtgtcaagtattaaggaacggagggagta 26476816  T

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Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 31932065 - 31931986
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||  ||||||||||||||||||| || ||||||||||||    
T  31932065 caagatatttaagctcaaaattatgtattggcatgcgtaatagaatcaactgtgtcatgtattaaggaacggagggagta 31931986  T

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Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44963558 - 44963479
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||| ||||| |||||||||||||||| |||||||| ||||| |||||| |||||||||||||||    
T  44963558 caagatatttaagctcaaagttatgtattgacatgcgtaataaggtcaactatgtcaagtattaagggacggagggagta 44963479  T

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Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 40058848 - 40058774
Alignment:
Q  6 tatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||| || ||| |||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  40058848 tatttaaactcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattatgagacggagggagta 40058774  T

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Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 28490342 - 28490423
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||||||||| ||||||||||||||  ||||||||| | |||||||||||| |||||||  ||||||||||||||||    
T  28490342 caagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcctgtattaaaggacggagggagtaat 28490423  T

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Target: chr1; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 41855607 - 41855527
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||||||| | ||||||||||||||| ||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  41855607 caagatatttaag-tcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacggagggagtaat 41855527  T

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Target: chr1; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 44240705 - 44240782
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||||| ||||||||||||||| ||||||||| | ||| |||||||||| ||||| |||||||||||||||||    
T  44240705 atatttaagctcaaaattatgcattgaaatgcgtaattgagtccactgtgtcatttattaagggacggagggagtaat 44240782  T

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Target: chr1; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 48312214 - 48312291
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||||| |||||||||||||||||||| ||||| ||| |||||||| | ||||||||||||||| ||||||||    
T  48312214 atatttaagctcaaaattatgcattgacatgcataataaggtaaactgtgttaagtattatgggacggaaggagtaat 48312291  T

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Target: chr1; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 48613967 - 48613897
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacg 71  Q
    ||||||||||||||| |||||||| ||||||||||||||||| ||| |||||| ||| |||||||||||||    
T  48613967 caagatatttaagctcaaaattatacattgacatgcgtaataaggttaactgtatcaagtattatgggacg 48613897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 5606277 - 5606196
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||||    
T  5606277 caagatatttaaactcaaaattaagcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagtaat 5606196  T

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Target: chr1; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1821515 - 1821443
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacgga 73  Q
    ||||||||||||||| ||||||||||||||  || |||||| |||||||||||||||||||||| | ||||||    
T  1821515 caagatatttaagctcaaaattatgcattggtatacgtaattgggtcaactgtgtcatgtattaagagacgga 1821443  T

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Target: chr1; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 40883592 - 40883660
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatggga 69  Q
    ||||||||||||| | ||||||||||||| | |||||||||||| |||||||| |||||||||||||||    
T  40883592 caagatatttaagttcaaaattatgcattaatatgcgtaataggatcaactgtctcatgtattatggga 40883660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 43453051 - 43452983
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatggga 69  Q
    |||||||||||| || ||||||||||||||| |||||||||| |||||||||||||| |||||| ||||    
T  43453051 caagatatttaaactcaaaattatgcattgatatgcgtaataaggtcaactgtgtcaagtattaaggga 43452983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 26544050 - 26544129
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||| ||||||||| |||||||||||||||  |||||  ||||||||||||||    
T  26544050 caagatatttaaactcaaaattacgcattgatatgcgtaatcgggtcaactgtgtcacttattaaaggacggagggagta 26544129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 41414385 - 41414464
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||||||||| || |||||| | |||||||||||||| ||||| |||| ||| ||||||    
T  41414385 caagatatttaagctcaaaattatgcattgaaatacgtaattgagtcaactgtgtcatatattaagggatggatggagta 41414464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 44741525 - 44741604
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||| ||||||||| || ||||||||||||  ||||| |||||||||||||||    
T  44741525 caagatatttaaactcaaaattacgcattgatatgcgtaattggatcaactgtgtcacttattaagggacggagggagta 44741604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 48389249 - 48389328
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||| || || ||||||||| | |||||||||||||| |||||  ||||||||||||||    
T  48389249 caagatatttaagctcaaaattatgtatcgaaatgcgtaatggagtcaactgtgtcatttattaaaggacggagggagta 48389328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7075216 - 7075142
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagg 75  Q
    |||||||||||| || ||||||| ||||||| ||||||||| |||||||||||||||  ||||| ||||||||||    
T  7075216 caagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttattaagggacggagg 7075142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 10100395 - 10100318
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||| || ||||||| ||||||| |||||||||  ||||||||||||||  ||||| |||||||||||||||||    
T  10100395 atatttaaactcaaaattacgcattgatatgcgtaattaggtcaactgtgtcacttattaagggacggagggagtaat 10100318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 9334567 - 9334643
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    ||||||||||| ||||||||||| | | |||||||||   |||||||||||||||||||| ||||||||| ||||||    
T  9334567 atatttaagctcaaaattatgcagtaaaatgcgtaatgaagtcaactgtgtcatgtattaagggacggagcgagtaa 9334643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 9358340 - 9358416
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    ||||||||||| ||||||||||| | | |||||||||   |||||||||||||||||||| ||||||||| ||||||    
T  9358340 atatttaagctcaaaattatgcagtaaaatgcgtaatgaagtcaactgtgtcatgtattaagggacggagcgagtaa 9358416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 29253627 - 29253699
Alignment:
Q  8 tttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||| ||||||||||||| | |||||||||   |||||||||||||||||||| || ||||||||||||    
T  29253627 tttaagctcaaaattatgcattcaaatgcgtaatgaagtcaactgtgtcatgtattaaggaacggagggagta 29253699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8250729 - 8250650
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||||||||||  || ||||||  ||||||||||||||  ||||| |||||||||||||||    
T  8250729 caagatatttaaactcaaaattatgcattggtatacgtaattaggtcaactgtgtcacttattaagggacggagggagta 8250650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 10124295 - 10124370
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||| || ||||||| ||||||| ||||||||| | |||||||||||||  ||||| |||||||||||||||    
T  10124295 atatttaaactcaaaattacgcattgatatgcgtaattgagtcaactgtgtcacttattaagggacggagggagta 10124370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 45299501 - 45299580
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| |||||||||| ||||    
T  45299501 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggaggaagta 45299580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 6871062 - 6871110
Alignment:
Q  32 catgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  6871062 catgcgtaataaggtcaaccgtgtcaagtattatgggacggagggagta 6871110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 25815710 - 25815782
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacgga 73  Q
    |||||||||||| || ||||||||||||||| || ||||||| | ||||||||||||  ||||| ||||||||    
T  25815710 caagatatttaacctcaaaattatgcattgagatacgtaataagatcaactgtgtcaactattaagggacgga 25815782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 50014447 - 50014368
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || | ||||||||||||  ||  ||||| | |||| ||||||||||||||| |||||||||||||||    
T  50014447 caagatatttaaactcagaattatgcattggaatatgtaatggagtcacctgtgtcatgtattaagggacggagggagta 50014368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 52141939 - 52141871
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatggga 69  Q
    |||||||||| | || |||| ||||||||| ||||| ||||| ||||||||||||||  ||||||||||    
T  52141939 caagatatttcaactcaaaaatatgcattggcatgcataataaggtcaactgtgtcagatattatggga 52141871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 52688717 - 52688777
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattat 65  Q
    ||||||||||| ||| |||||||||||||||  ||||| |||||| ||||||| |||||||    
T  52688717 atatttaagctcaaagttatgcattgacatgtataataaggtcaattgtgtcaagtattat 52688777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 2138915 - 2138836
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || |||||||  |||||  ||||||||| ||||||||||||| |  |||||  ||||||||||||||    
T  2138915 caagatatttaaactcaaaattacacattggtatgcgtaattgggtcaactgtgttacttattaaaggacggagggagta 2138836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 36035868 - 36035947
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| ||||||||||  |||||  ||||||||| |||||||||  ||||  ||||| |||||||||| ||||    
T  36035868 caagatatttaaacttaaaattacacattggtatgcgtaattgggtcaactaggtcacttattaagggacggaggaagta 36035947  T

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Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4489243 - 4489293
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaact 51  Q
    ||||||||||||||| ||||||||||||||  ||||||||| | |||||||    
T  4489243 caagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaact 4489293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3138774 - 3138815
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaata 42  Q
    ||||||||||||| ||||||||||| |||||||||| |||||    
T  3138774 caagatatttaagtttaaaattatgtattgacatgcataata 3138815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 49903572 - 49903491
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||| |||||| ||||||||| |||  |||||||||||  ||||||| | |||  |||||||||||| ||||| ||||    
T  49903572 caagatatgtaagctcaaaattatgaatttgcatgcgtaataaagtcaactatatcaaatattatgggacgaagggattaat 49903491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 10648084 - 10648017
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatggga 69  Q
    |||||||||||| || |||||||| |||  | || ||||||| |||||||||||||| |||||||||||    
T  10648084 caagatatttaaactcaaaattatacataaa-atacgtaataaggtcaactgtgtcaagtattatggga 10648017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 559 - 479
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  559 caagatatttaagctcaaaattatgcattgacatacgtaatagggtcaactgtgtcatgtattatgggacggcgggagtaa 479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 2e-29; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 29821232 - 29821313
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29821232 caagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatgtattatgggacggagagagtaat 29821313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37164199 - 37164278
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37164199 caagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatgtattatgggacggaggaagta 37164278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 4271895 - 4271816
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||| |||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  4271895 caagatatttaagctcaaagttatgcattggcatgcgtaataaggtcaactgtgtcaagtattatgggacggagggagta 4271816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1981262 - 1981186
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggaggga 77  Q
    |||||||||||| || |||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||    
T  1981262 caagatatttaaactcaaaattatgcattgacatgcgtaagagggtcaactttatcatgtattatgggacggaggga 1981186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 2806052 - 2805973
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  2806052 caagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacggagggagta 2805973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 28988275 - 28988196
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||||||||  ||||||||| | |||||||||||||||||||| |||||||||||||||    
T  28988275 caagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacggagggagta 28988196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1377990 - 1378071
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||||||||| ||||||||||||||  ||||||||| | |||||||||||||||||||| |||| ||||||||||||    
T  1377990 caagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggatggagggagtaat 1378071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 37588410 - 37588330
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||||| |||||||||||||| |||||| |||| | |||||||||||| ||||||||||||||| ||||||||    
T  37588410 aagatatttaagctcaaaattatgcattggcatgcgcaataagatcaactgtgtcaagtattatgggacggaaggagtaat 37588330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 24505693 - 24505772
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||| ||||| |||||||||||||||| |||||||| ||||| |||||| |||||||||||||||    
T  24505693 caagatatttaagctcaaagttatgtattgacatgcgtaataaggtcaactatgtcaagtattaagggacggagggagta 24505772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 39376749 - 39376670
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||| ||||||||| ||||||||| | ||||||||| |||||||||| |||||||||||||||    
T  39376749 caagatatttaagctcaaaatcatgcattgaaatgcgtaatggagtcaactgtatcatgtattaagggacggagggagta 39376670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 44210331 - 44210410
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||||||||| ||||||||| | |||||| || |||||||||| |||||||||||||||    
T  44210331 caagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaaccgtatcatgtattaagggacggagggagta 44210410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 47834025 - 47833946
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||||| | ||| |||||||||    
T  47834025 caagatatttaagctcaaaattatgcattgacatgcgtaataaagtcaactgtgtcaagtattaagagacagagggagta 47833946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 51306115 - 51306035
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    |||||||||||| || ||||||||||||||| ||||||||| | |||||||||||||| ||||| ||||| ||||||||||    
T  51306115 caagatatttaaactcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacagagggagtaa 51306035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23605783 - 23605704
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||| | ||||||||||||||  ||||||||| | ||||||||||||||||||||  ||||||||||||||    
T  23605783 caagatatttaagttcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaaaggacggagggagta 23605704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 50685106 - 50685181
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||| | |||||||| |||||  ||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  50685106 atatttaagttcaaaattatacattggtatgcgtaatagggtcaactgtgtcaagtattatgggacggatggagta 50685181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 51716717 - 51716794
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||||| |||||||||||||||||||| ||||| | |||||| |||||  ||||| |||||||||||||||||    
T  51716717 atatttaagctcaaaattatgcattgacatgcataataagctcaactatgtcaaatattaagggacggagggagtaat 51716794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11260884 - 11260960
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggaggga 77  Q
    ||||||||||||||  |||||||||||||||||||||||||| | |||| |||||||  ||||| ||||||||||||    
T  11260884 caagatatttaagcacaaaattatgcattgacatgcgtaataagatcaattgtgtcaaatattaagggacggaggga 11260960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24334259 - 24334191
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatggga 69  Q
    |||||||| |||||| ||||||||||||||| ||||||||| | |||||||||||||||||||| ||||    
T  24334259 caagatatgtaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatgtattaaggga 24334191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 28898952 - 28898872
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    ||||||||||||||| ||||||||||||||  |||| |||| | ||||||||| |||| ||||| ||||||||||||||||    
T  28898952 caagatatttaagctcaaaattatgcattggaatgcataatggagtcaactgtatcatatattaagggacggagggagtaa 28898872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 42185457 - 42185533
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggag 78  Q
    |||||||||||||| |||||||||||||   ||  |||||| |||||||||| ||||||||||||||||||||||||    
T  42185457 aagatatttaagctcaaaattatgcatttgaataggtaatatggtcaactgtatcatgtattatgggacggagggag 42185533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 46608396 - 46608476
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| ||||||||||||||||    
T  46608396 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagtaa 46608476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 1615721 - 1615800
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||| |||||||||||||||||||||| ||| || |||||||  ||||| |||||||| ||||||    
T  1615721 caagatatttaagctcaaagttatgcattgacatgcgtaataaggttaattgtgtcaaatattaagggacggaaggagta 1615800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 6520617 - 6520696
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||||||||| || |||||| | ||||||| |||||| ||||| |||||||||| ||||    
T  6520617 caagatatttaagctcaaaattatgcattgaaatacgtaattgagtcaactttgtcatttattaagggacggaggaagta 6520696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 17492849 - 17492928
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||| ||||||||||| ||| |||||| ||| |||||||||| |||||| | |||||||||||||    
T  17492849 caagatatttaagctcaaagttatgcattgatatgtgtaataaggttaactgtgtcaagtattaagagacggagggagta 17492928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 48380938 - 48381017
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  48380938 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 48381017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 48079928 - 48079850
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||||| ||| |||| ||||||||||||||||| | |||| ||||||| || ||| |||||||||||||||    
T  48079928 aagatatttaagctcaaagttatacattgacatgcgtaataagatcaaatgtgtcaagttttaagggacggagggagta 48079850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39260534 - 39260607
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggag 74  Q
    ||||||||||||  | |||||||||||||||||||||||||| | |||| ||||||| |||||| |||||||||    
T  39260534 caagatatttaaattcaaaattatgcattgacatgcgtaataagatcaattgtgtcaagtattaagggacggag 39260607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 39332711 - 39332630
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| ||||||| |||||||||    
T  39332711 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggggggagtaat 39332630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 43447347 - 43447428
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| || ||||||| ||||||  ||||||||  |||||||||||||||  ||||| |||||||||||||||||    
T  43447347 caagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtcacttattaagggacggagggagtaat 43447428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 28909717 - 28909649
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacgga 73  Q
    ||||||||||| |||||||| ||||| ||| ||||||| | ||||||||| ||||||||||||||||||    
T  28909717 atatttaagctcaaaattatacattggcatacgtaatatgatcaactgtgacatgtattatgggacgga 28909649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 3708435 - 3708514
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||| ||||||||||  ||||| |||||||||||||||    
T  3708435 caagatatttaaactcaaaattacgcattggtatgcgtaattgggttaactgtgtcacttattaagggacggagggagta 3708514  T

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Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 28914550 - 28914629
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| |||||||| ||||||    
T  28914550 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggatggagta 28914629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 31657238 - 31657159
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||||||||| ||||||||  | ||||||||| |||| ||||| |||||| | ||||||    
T  31657238 caagatatttaagctcaaaattatgcattgaaatgcgtaaatgagtcaactgtatcatttattaagggacgaatggagta 31657159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 54802936 - 54802870
Alignment:
Q  4 gatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggac 70  Q
    ||||||||| || ||||||||||||| |||||||||||| |||||||| | ||| ||||||||||||    
T  54802936 gatatttaacctcaaaattatgcattaacatgcgtaataaggtcaactctatcaagtattatgggac 54802870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1613099 - 1613050
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaac 50  Q
    |||||||||||| || ||||||||| ||||||||||||||||||||||||    
T  1613099 caagatatttaaactcaaaattatgtattgacatgcgtaatagggtcaac 1613050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8525297 - 8525218
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||| ||||||  ||||  |||||||||||||||    
T  8525297 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaaccgtgtcacttattcagggacggagggagta 8525218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 10385030 - 10385109
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||  ||||  ||||| |||||||||||||||    
T  10385030 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggagggagta 10385109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 31152847 - 31152922
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||| || |||||||  |||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  31152847 atatttaaactcaaaattacacattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 31152922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 40411489 - 40411410
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||  ||||||||||| |||  ||||| |||||||||||||||    
T  40411489 caagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtatcacttattaagggacggagggagta 40411410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 48652654 - 48652733
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || |||||||  |||||  || |||||| |||||||||||||||  ||||| |||||||||||||||    
T  48652654 caagatatttaaactcaaaattacacattggtatccgtaattgggtcaactgtgtcacttattaagggacggagggagta 48652733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 55631756 - 55631677
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  || |||||| |||||||||||||||  ||||| |||||| ||||||||    
T  55631756 caagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcacttattaagggacgaagggagta 55631677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 21045098 - 21045050
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgt 53  Q
    ||||| ||||| ||||||||| ||||||||||||||||| |||||||||    
T  21045098 atattcaagctcaaaattatgtattgacatgcgtaatagagtcaactgt 21045050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 37667655 - 37667576
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||  |||||| |||||||||| |||| ||||||||||  |||||  ||| ||||||||||    
T  37667655 caagatatttaaactcaaaattgcgcattggcatgcgtaattgggttaactgtgtcacttattaaaggatggagggagta 37667576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 39171140 - 39171219
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||| | ||||||  |||||||||  |||||||||| |||  ||||| |||||||||||||||    
T  39171140 caagatatttaaactcaaaatcacgcattggtatgcgtaattaggtcaactgtatcacttattaagggacggagggagta 39171219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 37381033 - 37381074
Alignment:
Q  33 atgcgtaatagggtcaactgtgtcatgtattatgggacggag 74  Q
    ||||||||| |||||||||||||||||||||| ||| |||||    
T  37381033 atgcgtaattgggtcaactgtgtcatgtattaaggggcggag 37381074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 27302044 - 27302123
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  27302044 caagatatttaaactcaaaattatgcattgacatgcgtaatagggtcaattgtatcatgtattatgggacggagggagta 27302123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8496765 - 8496685
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||| |||||    
T  8496765 caagatatttaagctcaaaattatgcattgatatacgtaatagggtcaactgtatcatgtattatgggacggaggaagtaa 8496685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 38036737 - 38036657
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  38036737 caagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacggagggagtaa 38036657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29616205 - 29616126
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| |||||||||||| |  |||||||||||| |||||||||||||||||||||||||||||||||||    
T  29616205 caagatatttaagctcaaaattatgcatcggtatgcgtaataggatcaactgtgtcatgtattatgggacggagggagta 29616126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44887594 - 44887515
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||| ||| ||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  44887594 caagatatttatgctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatttattatgggacggagggagta 44887515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 44947191 - 44947266
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||| ||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||    
T  44947191 atatttaagctcaaaattatgcattggtatgcgtaatatggtcaactgtgtcatgtattatgggacggagggagta 44947266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17523985 - 17524066
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||||||||| |||||||||||||||||||||||||| | |||| ||||||||||||||||||| |||||| |||||    
T  17523985 caagatatttaagctcaaaattatgcattgacatgcgtaataagatcaattgtgtcatgtattatgggatggagggcgtaat 17524066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 14583799 - 14583721
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||||| ||||||||||||||  ||||||||||| ||||||| |||||||||||| |||||||||||||||    
T  14583799 aagatatttaagctcaaaattatgcattggaatgcgtaatagagtcaactatgtcatgtattaagggacggagggagta 14583721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 44362103 - 44362184
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||||||||| ||||||||||||||  ||||||||| | ||||||| |||||||||||| |||||||||||||||||    
T  44362103 caagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactttgtcatgtattaagggacggagggagtaat 44362184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11756960 - 11757040
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    ||||||||| ||||| ||||||||||||||  ||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  11756960 caagatattcaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacggagggagtaa 11757040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 67277 - 67348
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacgg 72  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  67277 caagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactatgtcaagtattatgggacgg 67348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 20671442 - 20671517
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||| ||||  |||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  20671442 atatttaagctcaaaaccatgcattgacatgcgtaataaggtcaactgtgtcaagtattgtgggacggagggagta 20671517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 43049148 - 43049069
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||||||||| ||||||||| | |||||||||||||| ||||| || ||||||||||||    
T  43049148 caagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaaggtacggagggagta 43049069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 37094314 - 37094392
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagt 79  Q
    ||||||||||||||| ||||||||||||||| || |||||| | |||||||||||||| ||||| ||||||||||||||    
T  37094314 caagatatttaagctcaaaattatgcattgaaatacgtaatggagtcaactgtgtcatttattaagggacggagggagt 37094392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 44040007 - 44040081
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagg 75  Q
    |||||||||||| || ||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||    
T  44040007 caagatatttaaactcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatttattatgggatggagg 44040081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 11538871 - 11538950
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||||||||  ||| ||||| | ||||||| |||||||||||| |||||||||||||||    
T  11538871 caagatatttaagctcaaaattatgcattggaatgtgtaatggagtcaactatgtcatgtattaagggacggagggagta 11538950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21132807 - 21132728
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||||||||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  21132807 caagatatttaaactcaaaattatgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 21132728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 28583181 - 28583102
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||  |||||||||||||||||||||| |||||||||||||||    
T  28583181 caagatatttaaactcaaaattacgcattggtatgcgtaactgggtcaactgtgtcatgtattaagggacggagggagta 28583102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 40645864 - 40645943
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||||||  || |||||||||||||||||||||| |||||| ||||| | ||||||||||||| ||||||||    
T  40645864 caagatatttaagctcgaagttatgcattgacatgcgtaataaggtcaattgtgttaagtattatgggacgaagggagta 40645943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1645285 - 1645212
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggag 74  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||||  ||| ||| ||||||||||||||||    
T  1645285 caagatatttaagctcaaacttatgcattgacatgcgtaataaggtcatatgtatcaagtattatgggacggag 1645212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 3466468 - 3466549
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||||||||| ||| |||||||||||||| | ||||| || ||||||||||| ||||||||| || |||||||||||    
T  3466468 caagatatttaagctcaaagttatgcattgacatacataataaggccaactgtgtcaagtattatggaacagagggagtaat 3466549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 761732 - 761812
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| ||||||||||||||||    
T  761732 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagtaa 761812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 14378566 - 14378487
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  14378566 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 14378487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 32909237 - 32909316
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||| ||||||||||||||||||||||   |||| ||||||| |||||| |||||| ||||||||    
T  32909237 caagatatttaagctcaaagttatgcattgacatgcgtaataaaatcaattgtgtcaagtattaagggacgaagggagta 32909316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 30653544 - 30653622
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||| || |||||||||||||||||||| ||||| |||||||| |||||| ||||||| ||| || ||||||    
T  30653544 aagatatttaatctgaaaattatgcattgacatgcttaataaggtcaactatgtcatatattatgagacagatggagta 30653622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 38842345 - 38842425
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    |||||||||||| || ||||||| ||||||  ||||||||| ||||||||||| |||  ||||| ||||||||||||||||    
T  38842345 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtatcacttattaagggacggagggagtaa 38842425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 44871517 - 44871585
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacgga 73  Q
    |||||||| || |||||||||||||||||||  |||||||||||||||  ||||||||||||| |||||    
T  44871517 atatttaaactcaaaattatgcattgacatgtataatagggtcaactgcatcatgtattatggaacgga 44871585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4960333 - 4960412
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||| ||||  ||||||||| | ||||||||| | |||||||| ||||| |||||||||    
T  4960333 caagatatttaagctcaaaattatgtattggaatgcgtaatggagtcaactgtattatgtattaagggacagagggagta 4960412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 8058468 - 8058405
Alignment:
Q  17 aaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||| |||| ||||||||||| ||| |||||||||| ||||||||||||| ||||||||    
T  8058468 aaaattatgtattggcatgcgtaataaggttaactgtgtcaagtattatgggacgaagggagta 8058405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 30464614 - 30464693
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || |||||||  |||||| |||||||||  ||||||||||||||  ||||| |||||||||||||||    
T  30464614 caagatatttaaactcaaaattacacattgatatgcgtaatttggtcaactgtgtcacttattaagggacggagggagta 30464693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18419180 - 18419257
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggag 78  Q
    |||||||||||| || |||||||| |||||  |||| |||| | |||||||||||||||||||| |||| ||||||||    
T  18419180 caagatatttaatctcaaaattatacattggaatgcataatggagtcaactgtgtcatgtattaagggaaggagggag 18419257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40035469 - 40035534
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatg 66  Q
    ||||||||||||||| ||||||||| |||||||||  ||||||| |||||| |||||| |||||||    
T  40035469 caagatatttaagctgaaaattatgtattgacatgtataataggatcaactatgtcatatattatg 40035534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 14512022 - 14512094
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacgga 73  Q
    ||||||||||||||| ||| |||||||||||||||| ||||| | |||| ||||||| ||||||  |||||||    
T  14512022 caagatatttaagctcaaagttatgcattgacatgcataataagatcaattgtgtcaagtattaaaggacgga 14512094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29917807 - 29917728
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||| | ||||||||||| |  ||||||||||| |||| | ||||||| |||||| ||||||||| |||||    
T  29917807 caagatatttaagatcaaaattatgcactcgcatgcgtaataaggtcgattgtgtcaagtattaagggacggagagagta 29917728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 2026755 - 2026832
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||| ||||||||||| ||||  ||||| ||||| |||||| | ||| |||||||||||||||||| |||||    
T  2026755 aagatatttaaacttaaaattatacattagcatgcataataaggtcaattatgt-atgtattatgggacggagagagta 2026832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 44717480 - 44717529
Alignment:
Q  4 gatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgt 53  Q
    |||||||||||| ||||||||| |||||||||||||||| | ||||||||    
T  44717480 gatatttaagctcaaaattatgaattgacatgcgtaataagatcaactgt 44717529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 8123836 - 8123900
Alignment:
Q  17 aaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    |||||||||||||||||||| ||||| |||||| ||||||| |||||| | ||  ||||||||||    
T  8123836 aaaattatgcattgacatgcataataaggtcaaatgtgtcaagtattacgagatagagggagtaa 8123900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23437692 - 23437613
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  |||||| || |  ||||||||||||  ||||| |||||||||||||||    
T  23437692 caagatatttaaactcaaaattacgcattggtatgcgtcattgaatcaactgtgtcacttattaagggacggagggagta 23437613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29708743 - 29708822
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| | |||||||  ||||  ||||| |||||||||||||||    
T  29708743 caagatatttaaactcaaaattacgcattggtatgcgtaattgagtcaactaggtcacttattaagggacggagggagta 29708822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 25866251 - 25866325
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagg 75  Q
    ||||||||||||||| ||||||||| ||||  ||| ||||| | ||||||||| | ||||||||  |||||||||    
T  25866251 caagatatttaagctcaaaattatgaattggaatgtgtaatggagtcaactgtattatgtattaaaggacggagg 25866325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23547250 - 23547331
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| || ||||||| ||||||  |||||||||   |||||||||||||  ||||| || ||||||||| ||||    
T  23547250 caagatatttaaactcaaaattacgcattggtatgcgtaattaagtcaactgtgtcacttattaaggaacggagggaataat 23547331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 4326994 - 4326942
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtca 57  Q
    |||||||| || |||||||  |||||| ||||||||| |||||||||||||||    
T  4326994 atatttaaactcaaaattacacattgatatgcgtaattgggtcaactgtgtca 4326942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 5842300 - 5842379
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||    
T  5842300 caagatatttaagctcaaaattatgcattgacattcgtaatatggtcaactgtgtcatgtattatgggacggaaggagta 5842379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 25571574 - 25571495
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||    
T  25571574 caagatatttaagcttaaaattatgtattgacattcgtaatagggtcaactgtgtcacgtattatgggacgaagggagta 25571495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26651130 - 26651050
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    ||||||||||||||| |||||||||  |||  |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26651130 caagatatttaagctcaaaattatgttttggtatgcgtaatagggtcaactgtgtcatttattatgggacggagggagtaa 26651050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 37099754 - 37099677
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||| || |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||| ||||||    
T  37099754 atatttaatctcaaaattatgcattgacatgcgtaataagatcaactgtgtcaagtattatgggacggaggaagtaat 37099677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 47713311 - 47713235
Alignment:
Q  4 gatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| ||| |||||||||||||||||||||| |||||| |||||||  |||||||||||||||||||||    
T  47713311 gatatttaagctcaaagttatgcattgacatgcgtaataaggtcaattgtgtcaaatattatgggacggagggagta 47713235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9173218 - 9173156
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtatt 63  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  9173218 caagatatttaagttcaaaattatgcattgacatgcgtaatagggtcaactgtgtcttgtatt 9173156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 18756787 - 18756848
Alignment:
Q  17 aaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagt 79  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  18756787 aaaattatgcattgatatgcgtaatagg-tcaactgtgtcatgtattatgggacggagggagt 18756848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 41007839 - 41007765
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagg 75  Q
    |||||||||||| || |||||||| ||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  41007839 caagatatttaaactcaaaattatacattgacatacgtaataaggtcaactgtgtcaagtattatgggacggagg 41007765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 38353480 - 38353399
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| ||||  ||||||||||| ||||| ||||||  ||||||||||||||||||||||||| |||||||||||    
T  38353480 caagatatttaaacttagtattatgcattggcatgcataatagaatcaactgtgtcatgtattatgggacagagggagtaat 38353399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3124028 - 3123960
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatggga 69  Q
    ||||||||||||||| |||  ||||||||||||||||||||| |||||||||||||| |||||||||||    
T  3124028 caagatatttaagctcaaagatatgcattgacatgcgtaataaggtcaactgtgtcaagtattatggga 3123960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 28016593 - 28016671
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||| ||||||||||  ||||||||||| || |||||||||||||||||||||||| ||||||||    
T  28016593 caagatatttaagctcaaa-ttatgcattggtatgcgtaatagagttaactgtgtcatgtattatgggacgaagggagta 28016671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29247809 - 29247888
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||| | ||| || | ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  29247809 caagatatttaagttcaaagttgtacattgacatgcgtaataaggtcaactgtgtcaagtattaagggacggagggagta 29247888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 48448700 - 48448779
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| |||||||||||||   ||| ||||| |||||||||||||||||||||| |||| ||||||||||    
T  48448700 caagatatttaagctcaaaattatgcattagtatgtgtaattgggtcaactgtgtcatgtattaagggatggagggagta 48448779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16807028 - 16806949
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||||||||||  ||||||||| |||||||||||||||  ||||| | |||||||||||||    
T  16807028 caagatatttaaactcaaaattatgcattggtatgcgtaattgggtcaactgtgtcacttattaagtgacggagggagta 16806949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 32972217 - 32972138
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| |||||||||||||   ||||||||| |  ||||||||||||| ||||| |||||||||||||||    
T  32972217 caagatatttaagctcaaaattatgcattagaatgcgtaatggaatcaactgtgtcatttattaagggacggagggagta 32972138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 35693712 - 35693633
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||| ||||||||| |||||||||||||||  ||||| |||||| ||||||||    
T  35693712 caagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttattaagggacgaagggagta 35693633  T

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Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 38069234 - 38069312
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||| || ||||||| ||||||| ||||||||| |||||||||||||||  ||||| ||||| |||||||||    
T  38069234 aagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttattaagggactgagggagta 38069312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19817517 - 19817582
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatg 66  Q
    |||||||||||| ||||||||||||||||  ||||||||||| |||||||| ||||| ||||||||    
T  19817517 caagatatttaaacttaaaattatgcattagcatgcgtaataaggtcaactatgtcaagtattatg 19817582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31496529 - 31496477
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgt 53  Q
    ||||||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  31496529 caagatatttaagttcaaaattatgcattgacatgcgtaataaggtcaactgt 31496477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 36820061 - 36820137
Alignment:
Q  4 gatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  36820061 gatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 36820137  T

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Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 40232414 - 40232488
Alignment:
Q  6 tatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||| || |||||||  |||||| ||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  40232414 tatttaaactcaaaattacacattgatatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 40232488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 41844953 - 41845031
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||||| ||| ||||||||| | |||||||||| |||||| ||||| | |||||| |||| ||||||||||    
T  41844953 aagatatttaagctcaaagttatgcattaaaatgcgtaataaggtcaaatgtgttaagtattaagggatggagggagta 41845031  T

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Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32345665 - 32345584
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| || ||||||| ||||||  ||||||||| | |||||||||||||  ||||| |||||||| ||||||||    
T  32345665 caagatatttaaactcaaaattacgcattggtatgcgtaattgagtcaactgtgtcacttattaagggacggatggagtaat 32345584  T

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Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 40818573 - 40818512
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatg 66  Q
    ||||| ||||| ||||||||||||||  ||  ||||||||||||||||||||||||||||||    
T  40818573 atattgaagctcaaaattatgcattggtatatgtaatagggtcaactgtgtcatgtattatg 40818512  T

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Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19327497 - 19327576
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||| | ||||||||||||||  || | |||| | |||||||||||||||||||| ||||  |||||||||    
T  19327497 caagatatttaagttcaaaattatgcattggaatacataatggagtcaactgtgtcatgtattaagggagagagggagta 19327576  T

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Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 46242359 - 46242304
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtca 57  Q
    |||||||||||||| ||| |||||||||  ||||||||||| ||||||||||||||    
T  46242359 aagatatttaagctcaaagttatgcattatcatgcgtaataaggtcaactgtgtca 46242304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4620246 - 4620312
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgg 67  Q
    |||||||||||| || ||||||||||||| |||||  ||||| |||||| | |||||||||||||||    
T  4620246 caagatatttaaactcaaaattatgcattaacatgtataatatggtcaaatatgtcatgtattatgg 4620312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 38259662 - 38259743
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||| |||||| |||||||||||||||||| |||  ||||   ||||||| |||||| ||||| |||||||| ||||||||    
T  38259662 caagacatttaaacttaaaattatgcattgaaatgtataatgaagtcaactatgtcatatattaagggacggatggagtaat 38259743  T

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Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 25273899 - 25273820
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||| ||||||||| || |||| |||||||  ||||| |||| |||| |||||    
T  25273899 caagatatttaaactcaaaattacgcattgatatgcgtaattggatcaattgtgtcacttattaagggatggagagagta 25273820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 27621177 - 27621098
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| |||||   ||||||||| || |||||||||||   ||||| |||||||||||||||    
T  27621177 caagatatttaaactcaaaattacgcattagtatgcgtaattggatcaactgtgtcgcttattaagggacggagggagta 27621098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 36404804 - 36404730
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||| ||| |||||||||||||||||||| |   ||||||||||||  |||||| ||| ||||||||||    
T  36404804 atatttaagctcaaagttatgcattgacatgcgtaaaaaaatcaactgtgtcaactattat-ggagggagggagta 36404730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 38441995 - 38442074
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||||||| | || |||| ||  |||||||||||||  ||||| || ||||| ||||||    
T  38441995 caagatatttaagctcaaaattatgcattaatatacgtagtaaagtcaactgtgtcaaatattaaggaacggatggagta 38442074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 42493813 - 42493893
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||| ||| | |||| ||| |||||| ||| || | || |||||||||||||| || |||||||| |||||||||||    
T  42493813 aagatattaaagataaaaaatatacattgatatgtgtgacagagtcaactgtgtcatttaatatgggacagagggagtaat 42493893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 2e-26; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33462887 - 33462967
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| |||||    
T  33462887 caagatatttaagctcaaaattatgcattggcatgcataatagggtcaactgtggcatgtattatgggacggaggaagtaa 33462967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 2643147 - 2643068
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| |||||||||||||| |||||||||| | ||||||| |||||||||||| |||||||||||||||    
T  2643147 caagatatttaagctcaaaattatgcattggcatgcgtaatggagtcaactatgtcatgtattaagggacggagggagta 2643068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9997757 - 9997678
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  9997757 caagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacggagggagta 9997678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10228606 - 10228527
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  10228606 caagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacggagggagta 10228527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 43394436 - 43394357
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| |||||||| ||||| ||||||| |||||||| ||||||||||||||||||| ||||||||||||    
T  43394436 caagatatttaagctcaaaattatccattggcatgcgtgatagggtccactgtgtcatgtattatggaacggagggagta 43394357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 49818939 - 49819018
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||||||||| |||| |||| | |||||||||||||||||||| |||||||||||||||    
T  49818939 caagatatttaagctcaaaattatgcattgaaatgcataatggagtcaactgtgtcatgtattaagggacggagggagta 49819018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 32961432 - 32961508
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||| || | |||||||||||||| |||||||    
T  32961432 atatttaaactcaaaattatgcattgacatgcgtaatagggtcaactgtatcgtatattatgggacggacggagtaa 32961508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 52093969 - 52093897
Alignment:
Q  3 agatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagg 75  Q
    ||||||||||||| |||||||||||||  |||||||||||| |||||| ||||||||||||||||||||||||    
T  52093969 agatatttaagctcaaaattatgcattagcatgcgtaatagagtcaaccgtgtcatgtattatgggacggagg 52093897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10106261 - 10106182
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||| | ||| ||||||||||||||||||||||  ||||||||||||| |||||| |||||||||||||||    
T  10106261 caagatatttaagttcaaagttatgcattgacatgcgtaataaagtcaactgtgtcaagtattaagggacggagggagta 10106182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 34680364 - 34680443
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| |||||||| |||||  || |||||||| |||||||||||||||||||| |||||||||||||||    
T  34680364 caagatatttaagctcaaaattatacattggaatacgtaatagagtcaactgtgtcatgtattaagggacggagggagta 34680443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36594295 - 36594232
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtatta 64  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  36594295 caagatatttaagctcaaaattatgcattgacatgcgtaataaggtcaactgtgtcaagtatta 36594232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 29588557 - 29588643
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaatgaaat 87  Q
    ||||||||||||||| |||||||||||||   || | |||||| ||||||||||||||||||||||||||||| |||||||| ||||    
T  29588557 caagatatttaagctcaaaattatgcattagtatacataatagagtcaactgtgtcatgtattatgggacggaaggagtaataaaat 29588643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4945728 - 4945647
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||||||||| ||||||||||||||  |||||| || | ||||| |||||||||||||| |||||||||||||||||    
T  4945728 caagatatttaagctcaaaattatgcattggaatgcgtgatggagtcaattgtgtcatgtattaagggacggagggagtaat 4945647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29809526 - 29809606
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    ||||||||||||||| ||||||||||||||  ||||||||| | || ||||||||||||||||| ||||||||| ||||||    
T  29809526 caagatatttaagctcaaaattatgcattggaatgcgtaatggagttaactgtgtcatgtattaagggacggagagagtaa 29809606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10232362 - 10232283
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||| | ||| ||||||||||||||||||||||  ||||||||||||| ||||||  ||||||||||||||    
T  10232362 caagatatttaagttcaaagttatgcattgacatgcgtaataaagtcaactgtgtcaagtattaaaggacggagggagta 10232283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14750937 - 14750854
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaatga 84  Q
    |||||||||||| || ||||||| ||||||  ||||||||  || ||||||||||||||||||| |||||||||||||||||||    
T  14750937 caagatatttaaactcaaaattacgcattggtatgcgtaactggatcaactgtgtcatgtattaagggacggagggagtaatga 14750854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 28958876 - 28958797
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||||||||| | ||||||||| | || ||||||||||||||||| |||||||||||||||    
T  28958876 caagatatttaaactcaaaattatgcattaaaatgcgtaatggagttaactgtgtcatgtattaagggacggagggagta 28958797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 1778544 - 1778623
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||||| ||||||||||||||  || |||||| | ||||||||||||||||| || |||||||||||||||||    
T  1778544 aagatatttaagctcaaaattatgcattggaatacgtaatggagtcaactgtgtcatgta-taagggacggagggagtaat 1778623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 4229065 - 4228986
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||||||||||  ||||||||| | |||||| ||||||||||||| |||| ||||||||||    
T  4229065 caagatatttaaactcaaaattatgcattggaatgcgtaatggagtcaaccgtgtcatgtattaagggatggagggagta 4228986  T

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Target: chr3; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4465063 - 4465142
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||||||||| |||| |||| | || ||||||||||| |||||  ||||||||||||||    
T  4465063 caagatatttaagctcaaaattatgcattgaaatgcataatggagttaactgtgtcatatattaaaggacggagggagta 4465142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 26759660 - 26759739
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||||  ||||| |||| |||||| ||||||||||||||||||||  ||||||||||||||    
T  26759660 caagatatttaaactcaaaattatatattgaaatgcataatagagtcaactgtgtcatgtattaaaggacggagggagta 26759739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 42098504 - 42098425
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  42098504 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 42098425  T

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Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 1334174 - 1334109
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgg 67  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||||||||| |||  ||||||||    
T  1334174 aagatatttaagctcaaaattatgcattgacatgtgtaataaggtcaactgtatcaaatattatgg 1334109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 29793254 - 29793174
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||||| || ||||||||||||||  ||||||||| |||| ||||||||||  ||||| |||||| ||||||||||    
T  29793254 aagatatttaaactcaaaattatgcattggtatgcgtaattgggttaactgtgtcacttattaagggacgaagggagtaat 29793174  T

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Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 12948222 - 12948301
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||||||||||  ||||||||| || ||||||||||||  ||||| | |||||||||||||    
T  12948222 caagatatttaaactcaaaattatgcattggtatgcgtaattggatcaactgtgtcacttattaagagacggagggagta 12948301  T

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Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29455585 - 29455506
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||  |||||||||||||||  ||||| |||||||||||||||    
T  29455585 caagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtcacttattaagggacggagggagta 29455506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29720577 - 29720656
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| |||||||| ||||||    
T  29720577 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggaaggagta 29720656  T

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Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44821411 - 44821332
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||| ||||||||||||||  |||||| |||||| ||||||| ||||||  |||||||| |||||    
T  44821411 caagatatttaagctcaaagttatgcattgacatatgtaataaggtcaattgtgtcaagtattaaaggacggagagagta 44821332  T

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Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 43170156 - 43170236
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||| ||| || ||||||||||||||  || |||||||| ||||| ||||| |||||||||||||| |||||||||||    
T  43170156 caagatatctaaactcaaaattatgcattggtatacgtaatagagtcaattgtgt-atgtattatgggacagagggagtaat 43170236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53020010 - 53020071
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtat 62  Q
    |||||||||||  || ||| |||||||||||||||||||||| |||||||||||||| ||||    
T  53020010 caagatatttagtctcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtat 53020071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 43399009 - 43399065
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcat 58  Q
    ||||||||||| || ||||||||| ||||| |||||||||||| |||||||||||||    
T  43399009 aagatatttaaactcaaaattatgtattgatatgcgtaataggatcaactgtgtcat 43399065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 900965 - 900886
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  |||||||||  ||||||||||||||  ||||| |||||||||| ||||    
T  900965 caagatatttaaactcaaaattacgcattggtatgcgtaatttggtcaactgtgtcacttattaagggacggaggaagta 900886  T

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Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3817905 - 3817960
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtc 56  Q
    |||||||||||| || |||||||||||||| ||||||||| | |||||||||||||    
T  3817905 caagatatttaaactcaaaattatgcattgtcatgcgtaacacggtcaactgtgtc 3817960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16434734 - 16434655
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  || |||||| |||||||||||||||  ||||| |||||| ||||||||    
T  16434734 caagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcacttattaagggacgaagggagta 16434655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 34263581 - 34263502
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| || |||||||| |||  ||||| |||||||||||||||    
T  34263581 caagatatttaaactcaaaattacgcattggtatgcgtaattggatcaactgtatcacttattaagggacggagggagta 34263502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 34555333 - 34555412
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  |||| |||| ||| |||||||||||  ||||| |||||||||||||||    
T  34555333 caagatatttaaactcaaaattacgcattggtatgcataattgggccaactgtgtcacttattaagggacggagggagta 34555412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 36364640 - 36364566
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggaggg 76  Q
    ||||||||||||||| |||||||| |||||| ||||||||| | ||||||||||| || ||||| || ||||||||    
T  36364640 caagatatttaagctcaaaattatacattgaaatgcgtaatggagtcaactgtgttat-tattaaggaacggaggg 36364566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 47339961 - 47339906
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtc 56  Q
    |||||||||||| || |||||||||||||| ||||||||| | |||||||||||||    
T  47339961 caagatatttaaactcaaaattatgcattgtcatgcgtaacacggtcaactgtgtc 47339906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 50673859 - 50673940
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| || ||||||| ||||||  ||||||||| || ||||||||||||  | ||| | |||||||||||||||    
T  50673859 caagatatttaaactcaaaattacgcattggtatgcgtaattggatcaactgtgtcacttgttaagtgacggagggagtaat 50673940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 52093037 - 52092980
Alignment:
Q  6 tatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtatt 63  Q
    |||||||| |||||||||||||||  ||||||||||| || ||||||||||| |||||    
T  52093037 tatttaagtttaaaattatgcattagcatgcgtaataaggccaactgtgtcaagtatt 52092980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18013347 - 18013284
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtatta 64  Q
    |||||||||||||||  ||||||||||||   ||||||||| || |||||||| ||||||||||    
T  18013347 caagatatttaagctctaaattatgcatttgtatgcgtaattggatcaactgtatcatgtatta 18013284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 34669790 - 34669869
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||| |||  |||| || ||||||||||||  |||||  ||||||||||||||    
T  34669790 caagatatttaaactcaaaattacgcattgatatgtataattggatcaactgtgtcacttattaaaggacggagggagta 34669869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 46866529 - 46866604
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||| || ||||||| ||||||  ||||||||| ||||||| ||| |||  ||||| |||||||||||||||    
T  46866529 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaattgtatcacttattaagggacggagggagta 46866604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 47070208 - 47070283
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||| ||| |||| ||||| ||||||||||| | |||| |||||||  |||||||||| ||| ||||||    
T  47070208 atatttaagctgaaagttatacattggcatgcgtaataagatcaagtgtgtcaaatattatgggatggaaggagta 47070283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 49220654 - 49220733
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || |||||||| ||||  ||||||||||| ||||||||  |||| ||||||| |||| || ||||||    
T  49220654 caagatatttaacctcaaaattatacatttgcatgcgtaataaggtcaactacgtcaagtattataggaccgatggagta 49220733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31440509 - 31440455
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgt 55  Q
    |||||||||||||||  |||||||||||||||| |||||||| | |||| |||||    
T  31440509 caagatatttaagctctaaattatgcattgacacgcgtaataagatcaattgtgt 31440455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 49076303 - 49076222
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||   |||  ||||| || ||||||||||||||    
T  49076303 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactagatcacttattaaggaacggagggagtaat 49076222  T

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Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 38878355 - 38878275
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    |||||||||||| || ||||||| ||||||| || |||||| || ||||||  ||||  ||||| |||||||||| |||||    
T  38878355 caagatatttaaactcaaaattacgcattgatatacgtaattggatcaactaggtcacttattaagggacggaggaagtaa 38878275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 3169 - 3244
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||| ||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||    
T  3169 atatttaagctcaaaattatgcattggtatgcgtaatatggtcaactgtgtcatgtattatgggacggagggagta 3244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 1e-24; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2831890 - 2831963
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggag 74  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  2831890 caagatatttaagctcaaaattatgcattaacatgcgtaataaggtcaactgtgtcaagtattatgggacggag 2831963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 16646428 - 16646512
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaatgaa 85  Q
    ||||||||||||||||||||||||||||||| ||||||||| | ||||||||| |||||||||| |||||||| |||||| ||||    
T  16646428 caagatatttaagcttaaaattatgcattgaaatgcgtaatggagtcaactgtatcatgtattaagggacggaaggagtattgaa 16646512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37317058 - 37317137
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||||||||  ||||||||| | |||||||||||||||||||| |||||||||||||||    
T  37317058 caagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacggagggagta 37317137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 20682824 - 20682905
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| || ||||||||||||||| ||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  20682824 caagatatttaaactcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacggagggagtaat 20682905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7601278 - 7601202
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggaggga 77  Q
    ||||||||||||||| ||| ||||||||||||||||||||||  ||||||||||||| |||||| ||||||||||||    
T  7601278 caagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgtgtcaagtattaagggacggaggga 7601202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 6729984 - 6729905
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||||||||  ||||||||| | ||||| |||||||||||||| |||||||||||||||    
T  6729984 caagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaagtgtgtcatgtattaagggacggagggagta 6729905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 8896454 - 8896532
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    ||||||||||  || ||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  8896454 aagatatttagcctcaaaattatgcattgacatgtgtaatagggtcaactgtgtgatgtattat-ggacggagggagtaa 8896532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15177551 - 15177630
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || |||||||||||||  |||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  15177551 caagatatttaaactcaaaattatgcattttcatgtgtaatatggtcatctgtgtcatgtattatgggacggagggagta 15177630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 40471918 - 40471998
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  40471918 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcatttattaagggacggagggagtaa 40471998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 41575744 - 41575824
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    ||||||||||||||| ||||||||||||||| |||||||||   ||||||||| |||| ||||| ||||||||||||||||    
T  41575744 caagatatttaagctcaaaattatgcattgaaatgcgtaatgcagtcaactgtatcatatattaagggacggagggagtaa 41575824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 25627209 - 25627284
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||| |||||||||||||| ||||| ||||| |||||||| ||||| |||||| |||||||||||||||    
T  25627209 atatttaagctcaaaattatgcattgtcatgcataataaggtcaactatgtcaagtattaagggacggagggagta 25627284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 10333459 - 10333378
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||||    
T  10333459 caagatatttaaactcaaaattacgcattggtatgcgtaatcgggtcaactgtgtcacttattaagggacggagggagtaat 10333378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 44022454 - 44022523
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggag 74  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||||||||||| ||| ||| |||||||    
T  44022454 atatttaagttcaaaattatgcattgacatgcgtaataaggtcaactgtgtcatatatcatgagacggag 44022523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16125964 - 16125885
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||| | ||||||||||||||| |||||||||  |||||||||| |||||||||| | ||| |||||||||    
T  16125964 caagatatttaaggtcaaaattatgcattgatatgcgtaattaggtcaactgtctcatgtattaagagacagagggagta 16125885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 41319805 - 41319726
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  41319805 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 41319726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 16127661 - 16127583
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| |  ||||||||||||| ||||||||||  |||||| |||||||||||||| |||| ||||||||||    
T  16127661 aagatatttaaggtccaaattatgcattggcatgcgtaattaggtcaattgtgtcatgtattaagggagggagggagta 16127583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 20917808 - 20917722
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaatgaaat 87  Q
    |||||||||||| || ||||||| ||||||| ||||||||| || ||||||  ||||| ||||| ||||||||||||||||| ||||    
T  20917808 caagatatttaaactcaaaattacgcattgatatgcgtaattggatcaactaggtcatttattaagggacggagggagtaataaaat 20917722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 45036546 - 45036608
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtatta 64  Q
    ||||||||||| |||||||||||||||||  || |||||||||||||||||| ||||||||||    
T  45036546 aagatatttaaacttaaaattatgcattggtatacgtaatagggtcaactgtatcatgtatta 45036608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22718424 - 22718347
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggag 78  Q
    ||||||||||||||| ||||||||| ||||  ||||||||| | ||||||||| |||||||||| ||| |||||||||    
T  22718424 caagatatttaagctcaaaattatgtattggaatgcgtaatggagtcaactgtatcatgtattaaggggcggagggag 22718347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 42754236 - 42754155
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| || |||||||  |||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||||    
T  42754236 caagatatttaaactcaaaattacacattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagtaat 42754155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8373616 - 8373695
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| ||||||||||  |||||| || |||||| |||||||||||||||  ||||| |||||||| ||||||    
T  8373616 caagatatttaaacttaaaattacacattgatatacgtaattgggtcaactgtgtcacttattaagggacggatggagta 8373695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 16333661 - 16333740
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||| | ||||||||||||||  |||||||||  |||||||||| |||||||||| | ||| |||||||||    
T  16333661 caagatatttaaggtcaaaattatgcattggtatgcgtaattaggtcaactgtctcatgtattaagagacagagggagta 16333740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 31603298 - 31603219
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  |||| |||| |||||||||||||||  ||||| |||||||||||||||    
T  31603298 caagatatttaaactcaaaattacgcattggtatgcctaattgggtcaactgtgtcacttattaagggacggagggagta 31603219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 41437014 - 41437093
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||  |||||||||||||||  ||||| |||||||||||||||    
T  41437014 caagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtcacttattaagggacggagggagta 41437093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11383926 - 11383846
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    |||||||||||| || |||||||||| |||  |||  ||||| ||||||||||||||||||||||| || |||| ||||||    
T  11383926 caagatatttaaactcaaaattatgcgttggtatggataataaggtcaactgtgtcatgtattatgagaaggagagagtaa 11383846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 5096430 - 5096509
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |  ||||||||||||  ||||| |||||||||||||||    
T  5096430 caagatatttaaactcaaaattacgcattggtatgcgtaattgaatcaactgtgtcacttattaagggacggagggagta 5096509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7724491 - 7724412
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| |  ||||||| ||||||  ||||||||| |||||||||||||||  ||||| ||||| |||||||||    
T  7724491 caagatatttaaacccaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacagagggagta 7724412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 18504654 - 18504717
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtatta 64  Q
    |||||||||||||||  ||||||||||||||||| ||||||| |||||||| | ||| ||||||    
T  18504654 caagatatttaagctcgaaattatgcattgacatacgtaataaggtcaactatatcaagtatta 18504717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26436568 - 26436518
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaact 51  Q
    |||||||||||| || ||| |||||||||||||||||||||| ||||||||    
T  26436568 caagatatttaaactcaaagttatgcattgacatgcgtaataaggtcaact 26436518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4137591 - 4137647
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtca 57  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||    
T  4137591 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtca 4137647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31644215 - 31644147
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatggga 69  Q
    |||||| |||||| | ||| ||||||||   ||||||||||| |||||||||||||| |||||||||||    
T  31644215 caagatgtttaagttcaaagttatgcatatgcatgcgtaataaggtcaactgtgtcaagtattatggga 31644147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 43328678 - 43328615
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatggga 69  Q
    ||||||||||| ||||||||||||||  |||||||||| |||||| ||||||| |||||| ||||    
T  43328678 atatttaagctaaaaattatgcattg-gatgcgtaataaggtcaattgtgtcaagtattaaggga 43328615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9273799 - 9273849
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaact 51  Q
    ||||||||||||| | ||| |||||||||||||| ||||||| ||||||||    
T  9273799 caagatatttaagttcaaagttatgcattgacatacgtaataaggtcaact 9273849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 6075311 - 6075369
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattat 65  Q
    ||||||||| ||||||||||||||||  ||||  |||| |||||||||| |||||||||||    
T  6075311 atatttaagtttaaaattatgcattgggatgc--aataaggtcaactgtatcatgtattat 6075369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26801983 - 26801904
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  26801983 caagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacggagggagta 26801904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26809533 - 26809454
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  26809533 caagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacggagggagta 26809454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26824560 - 26824481
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  26824560 caagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacggagggagta 26824481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 27674399 - 27674478
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||| |||||| ||||| |||||||||    
T  27674399 caagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggaccgagggagta 27674478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 27675723 - 27675801
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||||| ||||||||||||||| ||||||||| | |||||||||||||| ||||| |||||||||||||||    
T  27675723 aagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacggagggagta 27675801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 1831246 - 1831325
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||| ||||||||||||||||||||||  |||||||| |||| |||||| |||||||||||||||    
T  1831246 caagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagtattaagggacggagggagta 1831325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10465177 - 10465098
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||||||||||||||| |||| |||| | |||||||||||||||||||| |||| ||||||||||    
T  10465177 caagatatttaagctcaaaattatgcattgaaatgcataatggagtcaactgtgtcatgtattaagggatggagggagta 10465098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 40316713 - 40316792
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||| ||||||||||||||||||||||  |||||||| |||| |||||| |||||||||||||||    
T  40316713 caagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagtattaagggacggagggagta 40316792  T

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Target: chr5; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 41410828 - 41410749
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| ||| ||||||||||||||||||||||  |||||||| |||| |||||| |||||||||||||||    
T  41410828 caagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagtattaagggacggagggagta 41410749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2805980 - 2806060
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    |||||||||||| || ||| |||| |||||||||||||||||  ||||||||||||| ||||||| |||||||||||||||    
T  2805980 caagatatttaaactcaaagttatacattgacatgcgtaataaagtcaactgtgtcaagtattataggacggagggagtaa 2806060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 6734964 - 6735043
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| |||||||| ||||||  | |||||||||||||||||| ||||||||||| |||| |||||||||    
T  6734964 caagatatttaagctcaaaattatacattgatgtacgtaatagggtcaactgtatcatgtattataggactgagggagta 6735043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9936770 - 9936691
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||| ||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  9936770 caagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 9936691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 40796954 - 40796875
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||| |||||||| | ||| |||||||||||||||||||||| |||||||||||||| |||||| ||||| |||||||||    
T  40796954 caaggtatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacagagggagta 40796875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 20502926 - 20502856
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagg 75  Q
    ||||||||| | ||||| |||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  20502926 atatttaagttcaaaataatgcattgacaaacgtaatagggtcaactgtgtcatctattatgggacggagg 20502856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 39925386 - 39925456
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacg 71  Q
    |||||||||||| || |||||||||||||||||| ||||||||||| |||| ||||||||||||| |||||    
T  39925386 caagatatttaaactcaaaattatgcattgacatacgtaatagggttaactttgtcatgtattattggacg 39925456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30788387 - 30788452
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatg 66  Q
    ||||||||||||||| |||||||||||||||||||||| ||| |||||||||| ||| ||||||||    
T  30788387 caagatatttaagctcaaaattatgcattgacatgcgttataaggtcaactgtttcaagtattatg 30788452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 967376 - 967448
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacgga 73  Q
    ||||||||||||| | ||||||||||||||  ||||||||||  |||||||||| ||||||||||||||||||    
T  967376 caagatatttaagttcaaaattatgcattggtatgcgtaataaagtcaactgtgccatgtattatgggacgga 967448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2799814 - 2799894
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    |||||||||||| || ||| |||| |||||||||||||||||  ||||||||||||| ||||||| ||| |||||||||||    
T  2799814 caagatatttaaactcaaagttatacattgacatgcgtaataaagtcaactgtgtcaagtattataggatggagggagtaa 2799894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 4152188 - 4152116
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggaggga 77  Q
    ||||||||||| |||| ||||||||||||| ||||| | |||||||| |||||| ||||||||||||||||||    
T  4152188 atatttaagctcaaaaatatgcattgacattcgtaacaaggtcaactatgtcatatattatgggacggaggga 4152116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 1918712 - 1918633
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||| | |||||||||||||| |||| |||||| |||||||||| || |||||| || |||||||||||||    
T  1918712 caagatatttaaggtcaaaattatgcattggcatgtgtaataaggtcaactgtatcctgtattgtgagacggagggagta 1918633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 41042715 - 41042640
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||| ||||||||||||||| || |||||| | |||| ||||||||||||||| |||||||| ||||||    
T  41042715 atatttaagctcaaaattatgcattgaaatacgtaatggagtcagctgtgtcatgtattaagggacggatggagta 41042640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 1781027 - 1780941
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaatgaaat 87  Q
    |||||||||||| || ||||||| ||||||  ||| ||||| |||||||||||||||  ||||| ||||||||||||||||| ||||    
T  1781027 caagatatttaaactcaaaattacgcattggtatgagtaattgggtcaactgtgtcacttattaagggacggagggagtaataaaat 1780941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14607440 - 14607359
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| || ||||||| |||||   ||||||||| |||||||||||||||  ||||| |||||||||||||||||    
T  14607440 caagatatttaaactcaaaattacgcattagtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagtaat 14607359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 31191059 - 31190978
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| || ||||||| ||||||  ||||||||| ||||||||||| |||  ||||| |||||||||||||||||    
T  31191059 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtatcacttattaagggacggagggagtaat 31190978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 40080163 - 40080236
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggag 74  Q
    ||||||||||||||| |||||||| |||||  ||||||||||| |||||||||||||| ||||| |||| ||||    
T  40080163 caagatatttaagctcaaaattatacattggaatgcgtaatagagtcaactgtgtcatttattaagggatggag 40080236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 20023042 - 20023122
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||  ||||||||||||||||    
T  20023042 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattgagggacggagggagtaa 20023122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 34170015 - 34170087
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggaggga 77  Q
    ||||||||||| |||||||| ||||   ||||||||| | |||||||||||||||||||| ||||||||||||    
T  34170015 atatttaagctcaaaattatacattagaatgcgtaattgagtcaactgtgtcatgtattaagggacggaggga 34170087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 19344577 - 19344502
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||| || ||||||| ||||||  ||||||||| |||||||||||||||| ||||| | |||||||||||||    
T  19344577 atatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcatttattaagagacggagggagta 19344502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 20040297 - 20040218
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||  | ||||||| ||||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  20040297 caagatatttaaattcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 20040218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 30721567 - 30721488
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||| ||| ||||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  30721567 caagatatttaaactcaaatttacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 30721488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 14355682 - 14355760
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||||| |||||||| ||| |||||||||||||  || || ||||||| |||||||||||| ||| |||||    
T  14355682 aagatatttaagctcaaaattatccatcgacatgcgtaataaagtgaattgtgtcaagtattatgggacagagcgagta 14355760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14057890 - 14057971
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| || ||||||| ||||||  |||| |||| ||||||| |||||||  ||||| |||||||||||||||||    
T  14057890 caagatatttaaactcaaaattacgcattggtatgcataattgggtcaattgtgtcacttattaagggacggagggagtaat 14057971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32110524 - 32110443
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||||  ||||||| ||||| ||||||| ||||||| ||| ||||    
T  32110524 caagatattgaagctcaaagttatgcattgagatgcgtaataatgtcaactctgtcaagtattattggacggaaggaataat 32110443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 32473905 - 32473832
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggag 74  Q
    ||||||||||| ||| ||||||||||||| ||||||||||||    ||| ||||||| ||||||||||||||||    
T  32473905 caagatatttacgctcaaaattatgcattaacatgcgtaataaaaacaattgtgtcaagtattatgggacggag 32473832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 1831532 - 1831611
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  |||||  ||| ||||||||||    
T  1831532 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaaaggaaggagggagta 1831611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33402473 - 33402410
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtatta 64  Q
    |||||||||||| || |||||||  |||||| ||||||||| ||||| ||||||||||||||||    
T  33402473 caagatatttaaactcaaaattacacattgatatgcgtaattgggtctactgtgtcatgtatta 33402410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 40316999 - 40317078
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  |||||  ||| ||||||||||    
T  40316999 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaaaggaaggagggagta 40317078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 39104157 - 39104111
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaact 51  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||    
T  39104157 atatttaagctcaaaattatgcattggcatgcgtaataaggtcaact 39104111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39035742 - 39035807
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatg 66  Q
    ||||||||||||||| |||||||| ||||||||| |||| || |||| |||||||||  |||||||    
T  39035742 caagatatttaagctcaaaattattcattgacatacgtagtaaggtcgactgtgtcaaatattatg 39035807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14639597 - 14639545
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgt 53  Q
    ||||||||||||||| ||| |||||||||||||| ||||||| | ||||||||    
T  14639597 caagatatttaagctcaaagttatgcattgacatacgtaataagatcaactgt 14639545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 41263011 - 41262931
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    |||||||||||| || ||| ||| ||||||  ||||||||| ||||||| |||||||  ||||| | ||||||||||||||    
T  41263011 caagatatttaaactcaaatttacgcattggtatgcgtaattgggtcaattgtgtcacttattaagagacggagggagtaa 41262931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14633189 - 14633268
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  |||||||||  ||||||||||||||  ||||| ||| ||||| |||||    
T  14633189 caagatatttaaactcaaaattacgcattggtatgcgtaattaggtcaactgtgtcacttattaaggggcggagagagta 14633268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 40365766 - 40365719
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactg 52  Q
    ||||||||| | ||| |||||||||||||||||||||| |||||||||    
T  40365766 atatttaagttcaaagttatgcattgacatgcgtaataaggtcaactg 40365719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 41410542 - 41410463
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  || |||||| |||||||||||||||  |||||  ||| ||||||||||    
T  41410542 caagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcacttattaaaggaaggagggagta 41410463  T

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Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1098357 - 1098438
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||  ||||  | ||| |||||||||| ||||||    
T  1098357 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttgttaagggacggaggaagtaat 1098438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 35117458 - 35117537
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||||||| |||||||||||||   ||||||||| |||||||||||||||||||||| | |||||||||||||    
T  35117458 caagatatttaagctcaaaattatgcattagtatgcgtaattgggtcaactgtgtcatgtattaagtgacggagggagta 35117537  T

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Target: chr6; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4890012 - 4889943
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggac 70  Q
    ||||||||||||||| |||||||||||||||||||||||||| | ||||| |||||| ||||||||||||    
T  4890012 caagatatttaagctcaaaattatgcattgacatgcgtaataagatcaaccgtgtcaagtattatgggac 4889943  T

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Target: chr6; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2397952 - 2398032
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    |||||||||||| |||||||||| ||||||  ||||||||| |||||||||||||||  ||||| ||||||||||||||||    
T  2397952 caagatatttaaacttaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagtaa 2398032  T

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Target: chr6; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10105993 - 10106065
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacgga 73  Q
    ||||||||| || || ||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||    
T  10105993 caagatattaaatctcaaaattatgcattgatatacgtaatatggtcaactgtgtcatgtattatgggacgga 10106065  T

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Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 33348023 - 33347944
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||||||||| | ||||||||| |||||||||||||||||||||| | |||||||| ||||    
T  33348023 caagatatttaaactcaaaattatgcattaatatgcgtaattgggtcaactgtgtcatgtattaagtgacggaggaagta 33347944  T

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Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16661487 - 16661406
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||||||||| ||| ||||| |||||||| ||||||| |||||||||||| | ||||||| |||| |||||||||||    
T  16661487 caagatatttaagctcaaagttatgtattgacatacgtaataaggtcaactgtgtaaagtattataggacagagggagtaat 16661406  T

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Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 16969561 - 16969642
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||||    
T  16969561 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagtaat 16969642  T

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Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24949854 - 24949923
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggac 70  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||||| ||| ||| ||||||||||||    
T  24949854 caagatatttaagctgaaagttatgcattgacatgcgtaataaggtcaattgtatcaagtattatgggac 24949923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 6142393 - 6142314
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  6142393 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 6142314  T

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Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29514913 - 29514834
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||| ||||||||| ||||||| |||||||  ||||| |||||||||||||||    
T  29514913 caagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaattgtgtcacttattaagggacggagggagta 29514834  T

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Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2141750 - 2141830
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaa 81  Q
    |||||||||||| || ||||||| ||||||  || |||||| |||||||||||||||| ||||| | ||||||||||||||    
T  2141750 caagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcatttattaagagacggagggagtaa 2141830  T

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Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 995745 - 995824
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || |||||||  |||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  995745 caagatatttaaactcaaaattactcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 995824  T

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Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 2667211 - 2667132
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  |||||||||  ||||||||||||||  ||||| |||||||||||||||    
T  2667211 caagatatttaaactcaaaattacgcattggtatgcgtaattaggtcaactgtgtcacttattaagggacggagggagta 2667132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 17496214 - 17496135
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| |||| ||||||||||    
T  17496214 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggatggagggagta 17496135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 2913079 - 2913160
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||  ||||  ||||| |||||||||||||||||    
T  2913079 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggagggagtaat 2913160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 31948521 - 31948460
Alignment:
Q  9 ttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggac 70  Q
    ||||||| | |||||||||||||||||||||||| |||||| ||||||| |||||| |||||    
T  31948521 ttaagctcagaattatgcattgacatgcgtaataaggtcaattgtgtcaagtattaagggac 31948460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 6188541 - 6188461
Alignment:
Q  2 aagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| || ||||||||| ||||    
T  6188541 aagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaaggaacggagggaataat 6188461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 31709078 - 31709153
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    ||||||||||| ||| |||||||||| ||||| ||||| | |||||| ||||| ||||||||||||| | ||||||    
T  31709078 atatttaagctcaaagttatgcattggcatgcataataagatcaactatgtcaagtattatgggacgaatggagta 31709153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10109297 - 10109232
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatg 66  Q
    ||||||||||||||| ||| |||||||||  ||||||||||| ||| |||||||| | ||||||||    
T  10109297 caagatatttaagctcaaagttatgcatttgcatgcgtaataaggtaaactgtgttaagtattatg 10109232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2656556 - 2656500
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtca 57  Q
    |||||||||||| |||||||||| ||||||  |||||||||  ||||||||||||||    
T  2656556 caagatatttaaacttaaaattacgcattggtatgcgtaatttggtcaactgtgtca 2656500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 24798432 - 24798353
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |  ||||||||||||  ||||| || ||||||||||||    
T  24798432 caagatatttaaactcaaaattacgcattggtatgcgtaattgaatcaactgtgtcacttattaaggaacggagggagta 24798353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 24825347 - 24825426
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || |||||||  |||||| ||||||||| | ||||||||  |||  ||||| |||||||||||||||    
T  24825347 caagatatttaaactcaaaattacacattgatatgcgtaattgagtcaactggatcacttattaagggacggagggagta 24825426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 32673930 - 32674009
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||| |||||| | |||||||| | |||  ||| ||||| | ||||||||| |||||||||| |||||||||||||||    
T  32673930 caagatgtttaaggtcaaaattatacgttggaatgtgtaatggagtcaactgtatcatgtattaagggacggagggagta 32674009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 12677166 - 12677234
Alignment:
Q  5 atatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacgga 73  Q
    |||||||| || ||||||||||||||| ||| ||||||  ||||||| |||||| ||||| | ||||||    
T  12677166 atatttaaactcaaaattatgcattgatatgtgtaataaagtcaactatgtcatatattacgagacgga 12677234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1248 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 1335 - 1262
Alignment:
Q  4 gatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggaggga 77  Q
    |||||||||||||||||||||||||||| |||| ||||||  |||||| ||||||||||||||| |||||||||    
T  1335 gatatttaagcttaaaattatgcattgatatgcataatagaatcaactatgtcatgtattatggaacggaggga 1262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 978 - 1051
Alignment:
Q  4 gatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggaggga 77  Q
    |||||||||||||||||||||||||||| |||| ||||||  |||||| ||||||||||||||| |||||||||    
T  978 gatatttaagcttaaaattatgcattgatatgcataatagaatcaactatgtcatgtattatggaacggaggga 1051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19617 - 19544
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggag 74  Q
    ||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||| ||||||  ||||||||    
T  19617 caagatatttaagctcaaaattatgcattgacattcgtaataaggtcaactgtgtcaagtattaatggacggag 19544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 2102 - 2026
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggaggga 77  Q
    ||||||||||||| | ||||||||||||| |||  ||||||| | ||||||||||||||||||||||||||||||||    
T  2102 caagatatttaagttcaaaattatgcattaacagacgtaatatgttcaactgtgtcatgtattatgggacggaggga 2026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 127 - 48
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||| |||| ||||| ||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  127 caagatatttaatctcaaagttatacattggcatgcgtaataaggtcaactgtgtcaagtattaagggacggagggagta 48  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 5558 - 5637
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  5558 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggagggagta 5637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0281 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13287 - 13368
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagtaat 82  Q
    ||||||||||||| | ||||||||| ||||  ||||||||| | || ||||||||||| ||||| |||||||||||||||||    
T  13287 caagatatttaaggtcaaaattatgtattggaatgcgtaatggagttaactgtgtcatatattaagggacggagggagtaat 13368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 4076 - 4017
Alignment:
Q  20 attatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagt 79  Q
    |||||||||||  ||||||||||  |||||||||||||||||||||||||||||| ||||    
T  4076 attatgcattggtatgcgtaataaagtcaactgtgtcatgtattatgggacggagagagt 4017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9305 - 9384
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || |||  ||| |||||| |||||||||| |||||||||| ||| ||||||||| ||||||||||||    
T  9305 caagatatttaaactaaaagctatacattgatatgcgtaataaggtcaactgtatcaagtattatggaacggagggagta 9384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 184148 - 184227
Alignment:
Q  1 caagatatttaagcttaaaattatgcattgacatgcgtaatagggtcaactgtgtcatgtattatgggacggagggagta 80  Q
    |||||||||||| || ||||||| ||||||  ||||||||| ||||||||||| |||  |||||  ||||||||||||||    
T  184148 caagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtatcacttattaaaggacggagggagta 184227  T

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