View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20616_high_8 (Length: 312)
Name: NF20616_high_8
Description: NF20616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20616_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 29 - 284
Target Start/End: Original strand, 45708050 - 45708307
Alignment:
| Q |
29 |
agttacaacgccttaaaaatccaaatgagcctaaaagatattctaaaggagaaatgtttgccaaataaatgtacatgtatcataactgagtaaattatag |
128 |
Q |
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| T |
45708050 |
agttacaacgccttaaaaattcaaatgagcctaaaagatattctaaaggataaatgtttgccaaataaatgtacatgtatcataactgaataaattatag |
45708149 |
T |
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| Q |
129 |
aagaggctatgagcagttaacactggaaagtgagttgagtgctattgaaataaatcaaacatggtatatgatagaactaccttacgataagaaggaaa-- |
226 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
45708150 |
aagaggctatgagcagttaaca-tggaaagtgagttgagtgctattgaaataaatcaaatatggtatatgatagaactaccttacgataagaaggaaata |
45708248 |
T |
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| Q |
227 |
-tggtcaaacgaatatgcaaattgaagttgaatcttgatggtccaattgttaaatataa |
284 |
Q |
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| T |
45708249 |
gtagtcaaacgaatatgcaaattgaagttgaatcttgatggtccaattgttaaatataa |
45708307 |
T |
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