View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20617_low_13 (Length: 294)
Name: NF20617_low_13
Description: NF20617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20617_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 9 - 275
Target Start/End: Original strand, 45955211 - 45955484
Alignment:
| Q |
9 |
gaagctaaaggagggaaagatagttgattctgttggagtgccaccaatcttgccatgtttggttgtgaggtgtgtataggatgaaattaattatgaagtt |
108 |
Q |
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| T |
45955211 |
gaagctaaaggagggaaagatagttgattctgttggagtgccaccaatcttgccatgtttggttgtgaggtgtgtataggatgaaattaattatgaagtt |
45955310 |
T |
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| Q |
109 |
tgaagtgtgtttcatttcctcttattatgttgcgataagactaggacttacctccacctcacttcccttcaattcacagcctttcatttccctccatctt |
208 |
Q |
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| T |
45955311 |
tgaagtgtgtttcatttcctcttattatgttgcgataagactaggacttacctccacctcacttcccttcaattcacagcctttcatttccctccatctt |
45955410 |
T |
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| Q |
209 |
ttaacaccttttttagaat-------ataataataaaatcatttattaattataagataaacaaaatgcaccat |
275 |
Q |
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| T |
45955411 |
ttaacaccttttttagaataataataataataataaaatcatttattaattataagataaagaaaatgcaccat |
45955484 |
T |
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