View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20617_low_2 (Length: 673)

Name: NF20617_low_2
Description: NF20617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20617_low_2
NF20617_low_2
[»] chr4 (55 HSPs)
chr4 (26-647)||(17657972-17658589)
chr4 (39-94)||(26636518-26636573)
chr4 (31-94)||(37255689-37255752)
chr4 (31-97)||(16912443-16912509)
chr4 (32-94)||(36072641-36072703)
chr4 (28-87)||(28702075-28702134)
chr4 (28-71)||(38949749-38949792)
chr4 (40-106)||(19934717-19934783)
chr4 (32-70)||(21586989-21587027)
chr4 (40-106)||(29006830-29006896)
chr4 (19-88)||(4484087-4484156)
chr4 (31-88)||(6087503-6087560)
chr4 (30-71)||(25700526-25700567)
chr4 (31-71)||(5535744-5535784)
chr4 (28-80)||(21859503-21859555)
chr4 (28-80)||(21915366-21915418)
chr4 (19-71)||(24331455-24331507)
chr4 (19-71)||(31808380-31808432)
chr4 (19-71)||(33659802-33659854)
chr4 (19-70)||(9011803-9011854)
chr4 (31-70)||(11796654-11796693)
chr4 (31-70)||(15659966-15660005)
chr4 (19-70)||(25856068-25856119)
chr4 (43-94)||(26920754-26920805)
chr4 (19-70)||(27080074-27080125)
chr4 (19-70)||(30279198-30279249)
chr4 (19-70)||(34321440-34321491)
chr4 (19-70)||(42013177-42013228)
chr4 (32-94)||(4484145-4484207)
chr4 (32-106)||(26920667-26920741)
chr4 (44-106)||(31864332-31864394)
chr4 (19-69)||(38382034-38382084)
chr4 (19-69)||(40952571-40952621)
chr4 (73-107)||(47786928-47786962)
chr4 (32-106)||(52281113-52281187)
chr4 (40-94)||(54164892-54164946)
chr4 (31-80)||(2254023-2254072)
chr4 (32-69)||(2582840-2582877)
chr4 (40-93)||(6462791-6462844)
chr4 (53-106)||(10308230-10308283)
chr4 (33-70)||(19934669-19934706)
chr4 (29-70)||(31089954-31089995)
chr4 (33-106)||(34136602-34136675)
chr4 (42-99)||(44755510-44755567)
chr4 (33-70)||(54164844-54164881)
chr4 (34-87)||(54508183-54508236)
chr4 (19-68)||(54787040-54787089)
chr4 (31-71)||(2253984-2254024)
chr4 (28-108)||(8826932-8827012)
chr4 (40-88)||(21586931-21586979)
chr4 (42-106)||(33377496-33377560)
chr4 (32-107)||(36869966-36870042)
chr4 (22-70)||(39754130-39754178)
chr4 (31-71)||(44171464-44171504)
chr4 (22-70)||(46462441-46462489)
[»] chr3 (30 HSPs)
chr3 (31-94)||(611589-611652)
chr3 (31-101)||(36571375-36571445)
chr3 (31-96)||(39836935-39837000)
chr3 (28-99)||(36344440-36344512)
chr3 (28-94)||(30578289-30578355)
chr3 (28-110)||(40470409-40470491)
chr3 (28-69)||(4980340-4980381)
chr3 (40-97)||(34365121-34365178)
chr3 (29-94)||(39682616-39682681)
chr3 (19-87)||(46967472-46967539)
chr3 (42-106)||(50466808-50466872)
chr3 (31-94)||(2128431-2128494)
chr3 (19-70)||(32833738-32833789)
chr3 (31-94)||(36566705-36566768)
chr3 (32-87)||(40470489-40470544)
chr3 (19-70)||(42595795-42595846)
chr3 (28-70)||(7672760-7672802)
chr3 (19-69)||(23444331-23444381)
chr3 (31-88)||(21970514-21970571)
chr3 (31-88)||(21992950-21993007)
chr3 (29-70)||(29241548-29241589)
chr3 (29-70)||(39964326-39964367)
chr3 (21-70)||(49562066-49562115)
chr3 (29-69)||(3447589-3447629)
chr3 (31-71)||(13900259-13900299)
chr3 (35-87)||(17109278-17109330)
chr3 (29-69)||(26367543-26367583)
chr3 (19-71)||(27102165-27102217)
chr3 (19-71)||(47931747-47931799)
chr3 (19-71)||(54680547-54680599)
[»] chr2 (20 HSPs)
chr2 (31-102)||(45472409-45472480)
chr2 (32-106)||(25899909-25899983)
chr2 (31-99)||(44094870-44094938)
chr2 (19-69)||(9071237-9071287)
chr2 (31-88)||(14952778-14952835)
chr2 (32-97)||(23992447-23992512)
chr2 (32-95)||(18731341-18731405)
chr2 (31-95)||(41824267-41824331)
chr2 (19-106)||(32143464-32143551)
chr2 (35-70)||(44274615-44274650)
chr2 (31-69)||(44274574-44274612)
chr2 (33-106)||(15446850-15446923)
chr2 (28-69)||(27331826-27331867)
chr2 (32-69)||(32630477-32630514)
chr2 (19-59)||(10041600-10041640)
chr2 (32-96)||(11093535-11093599)
chr2 (42-94)||(23377949-23378001)
chr2 (22-70)||(33618258-33618306)
chr2 (19-71)||(38721413-38721465)
chr2 (31-87)||(41824330-41824386)
[»] chr8 (26 HSPs)
chr8 (32-94)||(33070172-33070234)
chr8 (32-87)||(42749069-42749124)
chr8 (32-94)||(40640285-40640347)
chr8 (32-106)||(44319600-44319674)
chr8 (28-69)||(6189701-6189742)
chr8 (34-107)||(13841842-13841915)
chr8 (19-71)||(5419545-5419597)
chr8 (32-103)||(14700312-14700383)
chr8 (31-70)||(24418950-24418989)
chr8 (19-94)||(34326303-34326378)
chr8 (31-70)||(36308061-36308100)
chr8 (19-94)||(36916590-36916665)
chr8 (37-87)||(13029341-13029391)
chr8 (32-94)||(24287792-24287854)
chr8 (42-88)||(29360761-29360807)
chr8 (40-106)||(37716153-37716219)
chr8 (34-87)||(92911-92964)
chr8 (42-99)||(10983850-10983907)
chr8 (28-69)||(13964451-13964492)
chr8 (34-87)||(15936217-15936270)
chr8 (19-68)||(19293074-19293123)
chr8 (35-87)||(92857-92909)
chr8 (35-87)||(17087369-17087421)
chr8 (28-88)||(24287852-24287912)
chr8 (40-96)||(36307997-36308053)
chr8 (19-71)||(42666175-42666227)
[»] chr1 (32 HSPs)
chr1 (31-97)||(39940556-39940622)
chr1 (28-87)||(47753-47812)
chr1 (28-106)||(11989376-11989454)
chr1 (31-99)||(9902570-9902638)
chr1 (19-71)||(41563027-41563079)
chr1 (31-94)||(38834618-38834681)
chr1 (31-97)||(10256785-10256851)
chr1 (19-69)||(38824349-38824399)
chr1 (31-71)||(19580263-19580303)
chr1 (19-71)||(29673862-29673914)
chr1 (31-71)||(36163988-36164028)
chr1 (19-94)||(19175595-19175670)
chr1 (32-87)||(29302136-29302191)
chr1 (19-70)||(31909780-31909831)
chr1 (19-70)||(37255157-37255208)
chr1 (19-70)||(45925275-45925326)
chr1 (31-70)||(47446701-47446740)
chr1 (33-71)||(5246213-5246251)
chr1 (18-88)||(7461325-7461395)
chr1 (32-94)||(11989316-11989378)
chr1 (34-100)||(34597521-34597587)
chr1 (32-94)||(39216110-39216172)
chr1 (33-70)||(24807963-24808000)
chr1 (34-87)||(39075863-39075916)
chr1 (34-87)||(39075981-39076034)
chr1 (32-97)||(42761524-42761589)
chr1 (34-70)||(5431413-5431449)
chr1 (19-71)||(25378315-25378367)
chr1 (40-108)||(31998182-31998250)
chr1 (31-99)||(42660425-42660493)
chr1 (31-71)||(42915677-42915717)
chr1 (19-59)||(45239049-45239089)
[»] chr7 (38 HSPs)
chr7 (32-113)||(12171313-12171394)
chr7 (28-103)||(30138855-30138930)
chr7 (32-106)||(23797343-23797417)
chr7 (32-106)||(31319587-31319661)
chr7 (31-70)||(8169166-8169205)
chr7 (32-87)||(8595161-8595216)
chr7 (31-70)||(11602837-11602876)
chr7 (31-70)||(32599694-32599733)
chr7 (31-94)||(37491280-37491343)
chr7 (19-94)||(43813132-43813207)
chr7 (28-87)||(46648359-46648418)
chr7 (29-69)||(18819999-18820039)
chr7 (40-88)||(22281883-22281931)
chr7 (19-71)||(35593671-35593723)
chr7 (40-88)||(37101708-37101756)
chr7 (49-101)||(44234202-44234254)
chr7 (32-87)||(2360463-2360518)
chr7 (19-70)||(20353135-20353186)
chr7 (31-94)||(21099313-21099376)
chr7 (19-70)||(27163196-27163247)
chr7 (32-70)||(5977862-5977900)
chr7 (40-94)||(10599071-10599125)
chr7 (28-94)||(23797415-23797481)
chr7 (36-70)||(28409603-28409637)
chr7 (31-97)||(30457800-30457866)
chr7 (18-94)||(1548836-1548913)
chr7 (31-88)||(8169110-8169167)
chr7 (32-69)||(25774253-25774290)
chr7 (28-69)||(32941844-32941885)
chr7 (29-69)||(3106014-3106054)
chr7 (35-71)||(5977905-5977941)
chr7 (32-108)||(8571375-8571451)
chr7 (42-94)||(18654627-18654679)
chr7 (19-71)||(21387606-21387658)
chr7 (19-71)||(33471548-33471600)
chr7 (31-99)||(38940289-38940357)
chr7 (40-88)||(45002154-45002202)
chr7 (29-69)||(47535038-47535078)
[»] chr5 (38 HSPs)
chr5 (19-88)||(1100115-1100184)
chr5 (28-94)||(14772613-14772679)
chr5 (31-95)||(1098634-1098698)
chr5 (19-71)||(37685028-37685080)
chr5 (31-94)||(1098697-1098760)
chr5 (19-70)||(2673905-2673956)
chr5 (19-70)||(12295734-12295785)
chr5 (32-106)||(38370382-38370456)
chr5 (32-69)||(3100437-3100474)
chr5 (32-108)||(1996840-1996916)
chr5 (28-88)||(10495224-10495284)
chr5 (19-71)||(14571038-14571090)
chr5 (18-70)||(19216343-19216395)
chr5 (31-87)||(20019818-20019874)
chr5 (31-71)||(27895927-27895967)
chr5 (22-70)||(35067950-35067998)
chr5 (28-96)||(35942077-35942145)
chr5 (33-69)||(36895308-36895344)
chr5 (19-71)||(37554405-37554457)
chr5 (31-94)||(7313838-7313901)
chr5 (19-70)||(15965987-15966038)
chr5 (28-99)||(16899689-16899760)
chr5 (32-87)||(27314489-27314544)
chr5 (19-70)||(35969072-35969123)
chr5 (19-106)||(40355146-40355233)
chr5 (29-71)||(20503297-20503339)
chr5 (40-94)||(25358065-25358119)
chr5 (28-70)||(39785128-39785170)
chr5 (22-71)||(18942047-18942096)
chr5 (30-87)||(25408612-25408669)
chr5 (32-69)||(35032302-35032339)
chr5 (32-96)||(4913428-4913492)
chr5 (42-94)||(10437645-10437697)
chr5 (19-71)||(14416436-14416488)
chr5 (32-88)||(22650869-22650925)
chr5 (31-71)||(25713768-25713808)
chr5 (19-71)||(34102105-34102157)
chr5 (35-87)||(34867625-34867677)
[»] chr6 (9 HSPs)
chr6 (25-106)||(8449569-8449650)
chr6 (25-106)||(8458373-8458454)
chr6 (31-107)||(13462927-13463003)
chr6 (28-108)||(32254888-32254968)
chr6 (19-70)||(14173421-14173472)
chr6 (19-70)||(14177957-14178008)
chr6 (32-106)||(12383584-12383658)
chr6 (31-88)||(24111169-24111226)
chr6 (29-69)||(6033034-6033074)
[»] scaffold1266 (1 HSPs)
scaffold1266 (19-70)||(188-239)
[»] scaffold0263 (1 HSPs)
scaffold0263 (19-70)||(19824-19875)
[»] scaffold0111 (1 HSPs)
scaffold0111 (19-70)||(38065-38116)
[»] scaffold0635 (1 HSPs)
scaffold0635 (19-59)||(5430-5470)


Alignment Details
Target: chr4 (Bit Score: 557; Significance: 0; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 557; E-Value: 0
Query Start/End: Original strand, 26 - 647
Target Start/End: Original strand, 17657972 - 17658589
Alignment:
Q  26 tgataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgtagtaattaagctttgttaat 125  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  17657972 tgataatatagactacatatatcatttattgaatgaatctaaaaaataaagttttacttataacaatgatcgaatggtgtagtaattaacctttgttaat 17658071  T
Q  126 tactatcttaattaagttggatgttttatgaataagttagttcattcattactcattaattttatcaattcaatttttaactaatgtaaattacagtacc 225  Q
    |||||||||||    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17658072 tactatcttaa----gttggatgttttatgaataagttatttcatttattactcattaattttatcaattcaatttttaactaatgtaaattacagtacc 17658167  T
Q  226 ttggagcaggattagcaggactgcaaggaattttctatggaggaacgaactgctttcatagaagaaaagttattcatggcctctctccggacgatgtaga 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17658168 ttggagcaggattagcaggactgcaaggaattttctatggaggaacgaactgctttcatagaagaaaagttatttatggcctctctccggacgatgtaga 17658267  T
Q  326 aaagggtacatatatatatgttacgaatttaattagggtttttctatcatgttttgactgttttttggttaccctacactctcaaaccaatgttgcagga 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17658268 aaagggtacatatatatatgttacgaatttaattagggtttttctatcatgttttgactgttttttggttaccctacactctcaaaccaatgttgcagga 17658367  T
Q  426 aacaacttatctgaagtggagttaaaacaaaaatttggaacttcaaaggaacttatgaaatcagttggtcatgctttggaagataggacctattcagcta 525  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17658368 aacaacttatctgaagtggagttaaaacaaaaatttggaacttcaaaggaacttatgaaatcagttggtcatgctttggaagataggacctattcagcta 17658467  T
Q  526 gcgatattagtgttaacaaagctgttgaggaagctattcatgttgcttcttatggatatgaatacggcactggttggggtaaacaggtttgtcagacaaa 625  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  17658468 gcgatattagtgttaacaaagctgttgaggaagctattcatgttgcttcttatggatatgaatacggcacgggttggggtaaacaggtttgtcatacaaa 17658567  T
Q  626 cttgtatgaacgtgatagacgc 647  Q
    ||||||  ||||||||||||||    
T  17658568 cttgtacaaacgtgatagacgc 17658589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 26636518 - 26636573
Alignment:
Q  39 tacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||||||| |||||    
T  26636518 tacatacatcatttattgaatgaatctaaaaaataaatttttacttataatagtga 26636573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 37255752 - 37255689
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||||| |||||||||||||||||||| |||||||||||| || |||| ||||||| |||||    
T  37255752 atatagaccacatacatcatttattgaatgaatctaaaaaaccaacttttgcttataatagtga 37255689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 16912509 - 16912443
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcg 97  Q
    ||||||||||||||||||||||||||||| ||||||||||  | | |||||||||||| | ||||||    
T  16912509 atatagactacatacatcatttattgaatgaatctaaaaattacacttttacttataatattgatcg 16912443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 36072641 - 36072703
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||||||||||||||||||| ||||| ||| |||||  ||||||||||||||||| |||||    
T  36072641 tatagactacatacatcatttaatgaatgaatttaaaatgcaaagttttacttataatagtga 36072703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 28702134 - 28702075
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    |||||| ||||||||||||||||||| ||||| |||||||||| |||| |||| ||||||    
T  28702134 ataataaagactacatacatcatttaatgaatgaatctaaaaatcaaacttttgcttata 28702075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 38949749 - 38949792
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  38949749 ataatatagactacatacatcatttattgaataaatttaaaaaa 38949792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 19934717 - 19934783
Alignment:
Q  40 acatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||||||||||||||||||| ||||||||||| | | |||| ||||||| |||||||| | ||||||    
T  19934717 acatacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtgatcggagggtgta 19934783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 21586989 - 21587027
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  21586989 tatagactacatacatcatttattgaatgaatctaaaaa 21587027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 29006896 - 29006830
Alignment:
Q  40 acatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||||||||||||||||||| ||||||||||| | | |||| ||||||| ||||| || ||||||||    
T  29006896 acatacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtgaccggatggtgta 29006830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 4484156 - 4484087
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    |||||||  |||||| |||| | |||||||||| ||||||| |||||||||  |||||||||||||||||    
T  4484156 atgtggtctataataaagaccatatacatcattaattgaatgaatctaaaatgcaaagttttacttataa 4484087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 6087503 - 6087560
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    ||||||||||||||||||||||||||||| ||||| ||||  ||| |||| |||||||    
T  6087503 atatagactacatacatcatttattgaataaatctgaaaattaaatttttgcttataa 6087560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 25700526 - 25700567
Alignment:
Q  30 aatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  25700526 aatatagaccacatacatcatttattgaatgaatctaaaaaa 25700567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 5535784 - 5535744
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  5535784 atataaactacatacatcatttattgaatgaatctaaaaaa 5535744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 21859555 - 21859503
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagtttt 80  Q
    |||||| ||||||||||||||||||| ||||| |||||||||| |||| ||||    
T  21859555 ataataaagactacatacatcatttaatgaatgaatctaaaaatcaaattttt 21859503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 21915418 - 21915366
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagtttt 80  Q
    |||||| ||||||||||||||||||| ||||| |||||||||| |||| ||||    
T  21915418 ataataaagactacatacatcatttaatgaatgaatctaaaaatcaaattttt 21915366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 24331507 - 24331455
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| |||||||||| ||||||||| ||| ||||||| |||||||||||    
T  24331507 atgtggttcataatatagattacatacattattaattgaatgaatctaaaaaa 24331455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 31808380 - 31808432
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| ||||||||||| |||||||||||| | ||||| |||||||||||    
T  31808380 atgtggttcataatatagaccacatacatcattaaatgaatgaatctaaaaaa 31808432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 33659854 - 33659802
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| |||||||| ||||||||||||||| ||||||| || ||||||||    
T  33659854 atgtggttcataatatatactacatacatcattaattgaatgaacctaaaaaa 33659802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 9011803 - 9011854
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| ||||||||||| |||||||||||| | ||||| ||||||||||    
T  9011803 atgtggttcataatatagaccacatacatcattaaatgaatgaatctaaaaa 9011854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 11796654 - 11796693
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  11796654 atatagattacatacatcatttattgaataaatctaaaaa 11796693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 15660005 - 15659966
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  15660005 atatagactacatacatcatttattgaatgaacctaaaaa 15659966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 25856068 - 25856119
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| ||||||||||| |||||||||||| ||||||| || |||||||    
T  25856068 atgtggttcataatatagaccacatacatcattaattgaatgaacctaaaaa 25856119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 26920754 - 26920805
Alignment:
Q  43 tacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    ||||||||| ||||||| |||||||||  ||||||||||||||||| |||||    
T  26920754 tacatcattaattgaatgaatctaaaatgcaaagttttacttataatagtga 26920805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 27080125 - 27080074
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| ||||||||||| ||||||| |||| ||||||| ||||||||||    
T  27080125 atgtggtttataatatagaccacatacaacattaattgaatgaatctaaaaa 27080074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 30279198 - 30279249
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| ||||||||||| |||||||||||| ||||||| || |||||||    
T  30279198 atgtggttcataatatagaccacatacatcattaattgaatgaacctaaaaa 30279249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 34321440 - 34321491
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| |||||||||||||||||||||||| | ||||| || |||||||    
T  34321440 atgtggttcataatatagactacatacatcattaaatgaatgaacctaaaaa 34321491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 42013228 - 42013177
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| ||||||||||| |||||||||||| ||||||| ||| ||||||    
T  42013228 atgtggtttataatatagaccacatacatcattaattgaatgaatttaaaaa 42013177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 4484145 - 4484207
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    ||||||| |||||||||||||| ||||  ||||||| | ||||| |||||||||||| |||||    
T  4484145 tatagaccacatacatcatttaatgaacaaatctaatatacaaaattttacttataatagtga 4484207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 26920741 - 26920667
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    ||||||| || |||||||||||  |||| ||||||||| ||||| |||| ||||||| ||||| || ||||||||    
T  26920741 tatagaccacgtacatcatttaacgaatgaatctaaaatacaaaattttgcttataatagtgaccggatggtgta 26920667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 31864332 - 31864394
Alignment:
Q  44 acatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||||||||||| ||| ||||||||||| ||| ||||| |||||| | ||| |||||||||||    
T  31864332 acatcatttattaaatgaatctaaaaaataaatttttatttataataatgaccgaatggtgta 31864394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 38382034 - 38382084
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||||| |||||| ||||||||||||||||||| |||||  ||||||||    
T  38382034 atgtggtttataatacagactacatacatcatttaatgaatgtatctaaaa 38382084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 40952621 - 40952571
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||| ||| ||| |||||||||||||||||||| ||||||| |||||||||    
T  40952621 atgtagtttatattatagactacatacatcattaattgaatgaatctaaaa 40952571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 73 - 107
Target Start/End: Complemental strand, 47786962 - 47786928
Alignment:
Q  73 aaagttttacttataacagtgatcgaatggtgtag 107  Q
    |||||||||||||||| ||||||||||||||||||    
T  47786962 aaagttttacttataaaagtgatcgaatggtgtag 47786928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 52281187 - 52281113
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||| ||||||||||||||||||||||| ||| |||||  || | |||| ||||||| ||||| || ||||||||    
T  52281187 tatatactacatacatcatttattgaatgaatataaaatgcatatttttgcttataatagtgaccggatggtgta 52281113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 54164892 - 54164946
Alignment:
Q  40 acatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||||||||||||||||| ||||||||||| | | |||| ||||||| |||||    
T  54164892 acatacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtga 54164946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 2254023 - 2254072
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagtttt 80  Q
    |||||||||||||| |||||||||||||| ||| ||||||| ||| ||||    
T  2254023 atatagactacatatatcatttattgaatgaatttaaaaaataaactttt 2254072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 2582877 - 2582840
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  2582877 tatagactacatacatcatttaatgaatcaatctaaaa 2582840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 6462791 - 6462844
Alignment:
Q  40 acatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtg 93  Q
    |||||||||||||||||||| ||||||||||| ||| ||||  |||||| ||||    
T  6462791 acatacatcatttattgaatgaatctaaaaaataaaattttgtttataatagtg 6462844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 10308283 - 10308230
Alignment:
Q  53 attgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    ||||||| ||||||||| | |||||||| ||||||||||||| |||| ||||||    
T  10308283 attgaatgaatctaaaatataaagttttgcttataacagtgaccgaagggtgta 10308230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 19934706 - 19934669
Alignment:
Q  33 atagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  19934706 atagaccacatacatcatttattgaatgaatctaaaaa 19934669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 31089954 - 31089995
Alignment:
Q  29 taatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||||| |||||||||||||||| ||| ||||||||||    
T  31089954 taatatagaccacatacatcatttattcaatgaatctaaaaa 31089995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 34136602 - 34136675
Alignment:
Q  33 atagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||||| |||||| ||||||||||||| || || |||||  || |||||||||||| ||||| || ||||||||    
T  34136602 atagaccacatacttcatttattgaatgaaactgaaaaatgaacttttacttataatagtgaccggatggtgta 34136675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 44755510 - 44755567
Alignment:
Q  42 atacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaa 99  Q
    |||||| ||||| ||||| |||||||||  ||||||||||||||||| ||||| ||||    
T  44755510 atacattatttaatgaatgaatctaaaatgcaaagttttacttataatagtgaccgaa 44755567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 54164881 - 54164844
Alignment:
Q  33 atagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  54164881 atagaccacatacatcatttattgaatgaatctaaaaa 54164844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 54508236 - 54508183
Alignment:
Q  34 tagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    ||||| |||||||||||||||||||| ||||||||| | ||| |||| ||||||    
T  54508236 tagacaacatacatcatttattgaatgaatctaaaatataaatttttgcttata 54508183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 54787040 - 54787089
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaa 68  Q
    |||||||| ||| ||||||| |||||||||||| ||||||| ||||||||    
T  54787040 atgtggtttatattatagaccacatacatcattgattgaatgaatctaaa 54787089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 2254024 - 2253984
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| |||||||||||||| ||||| |||||||||||    
T  2254024 atatagaccacatacatcatttaatgaataaatctaaaaaa 2253984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 8826932 - 8827012
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgtagt 108  Q
    |||||| |||| | |||||||||| | | ||| |||||||||  ||||||||||||| ||||| |||||| | ||||||||    
T  8826932 ataataaagaccatatacatcattaaataaatgaatctaaaatgcaaagttttacttgtaacaatgatcggagggtgtagt 8827012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 21586979 - 21586931
Alignment:
Q  40 acatacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    ||||||||||||||||||||| | |||||||| ||| |||| |||||||    
T  21586979 acatacatcatttattgaatttacctaaaaaataaacttttgcttataa 21586931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 33377496 - 33377560
Alignment:
Q  42 atacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||||||||| ||||||| |||||||||  |||| |||||||||||| |||| ||| | ||||||    
T  33377496 atacatcattaattgaatgaatctaaaatgcaaaattttacttataatagtggtcggagggtgta 33377560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 36870042 - 36869966
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagtttta-cttataacagtgatcgaatggtgtag 107  Q
    |||||||| ||||| ||||||||||||| ||||||||||  ||| ||||| ||||||  ||||| |||| |||||||    
T  36870042 tatagacttcatacgtcatttattgaatgaatctaaaaattaaacttttagcttatattagtgaccgaaaggtgtag 36869966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 39754178 - 39754130
Alignment:
Q  22 tggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||| ||| |||||||||||||||||||| ||||||| || |||||||    
T  39754178 tggttcatattatagactacatacatcattaattgaataaacctaaaaa 39754130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 44171504 - 44171464
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    ||||||| ||||||||||||||||||||| ||| |||||||    
T  44171504 atatagattacatacatcatttattgaatgaatttaaaaaa 44171464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 46462441 - 46462489
Alignment:
Q  22 tggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||| |||||| ||||||||||||||||||||| ||| || |||||||    
T  46462441 tggtttataataaagactacatacatcatttattcaatgaacctaaaaa 46462489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 7e-23; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 611652 - 611589
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  611652 atatagactacatacatcatttattgaattaatctaaaaaacaaacttttacttataatagtga 611589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 36571445 - 36571375
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatg 101  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||| |||| ||||||| ||||| ||||||    
T  36571445 atatagactacatacatcatttattgaataaatctaaaaaagaaacttttgcttataatagtgaccgaatg 36571375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 39836935 - 39837000
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatc 96  Q
    |||||||| |||||||||||||||||||| ||||||||||  ||| ||||| |||||| |||||||    
T  39836935 atatagaccacatacatcatttattgaatgaatctaaaaagtaaacttttatttataatagtgatc 39837000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 36344440 - 36344512
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaac-aaagttttacttataacagtgatcgaa 99  Q
    |||||| |||| |||||||||||||| ||||| ||||||||| || ||| |||||||||||| ||||||||||    
T  36344440 ataataaagaccacatacatcatttaatgaatgaatctaaaatacaaaatttttacttataatagtgatcgaa 36344512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 30578289 - 30578355
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||| |||||  |||||||||||| ||||| ||||||||| |||||||||| ||||||| |||||    
T  30578289 ataataaagactgtatacatcatttaatgaatgaatctaaaatacaaagttttgcttataatagtga 30578355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 40470491 - 40470409
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgtagtaa 110  Q
    |||||| ||||||||||| ||||||| ||||| ||||||||||  ||| |||| ||||||  ||||| |||| ||||||||||    
T  40470491 ataataaagactacatacgtcatttaatgaatgaatctaaaaattaaatttttgcttatattagtgaccgaagggtgtagtaa 40470409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 4980340 - 4980381
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||| ||||||||||||||||||||||||| |||||||||    
T  4980340 ataataaagactacatacatcatttattgaatgaatctaaaa 4980381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 34365121 - 34365178
Alignment:
Q  40 acatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcg 97  Q
    ||||||||||||||| |||||||||||||||| ||  |||| ||||||| ||||||||    
T  34365121 acatacatcatttatcgaattaatctaaaaaataattttttgcttataatagtgatcg 34365178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 39682681 - 39682616
Alignment:
Q  29 taatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||||||| |||||||||||||||| ||| || |||||||| ||  |||||||||||| |||||    
T  39682681 taatatagaccacatacatcatttattcaatgaacctaaaaaataattttttacttataatagtga 39682616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 46967539 - 46967472
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    |||||||| ||||||| |||||||||||||||| | ||||| ||| ||||||| ||| |||||||||||    
T  46967539 atgtggttcataatatggactacatacatcattaaatgaatgaatataaaaaataaa-ttttacttata 46967472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 50466872 - 50466808
Alignment:
Q  42 atacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||||||||| ||||||| ||||||||| | ||| |||||||||||| | |||||||||| ||||    
T  50466872 atacatcattaattgaatgaatctaaaatataaatttttacttataataatgatcgaatgatgta 50466808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 2128431 - 2128494
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||||| |||||||||||||||||||| ||||||||| |  || |||| ||||||| |||||    
T  2128431 atatagaccacatacatcatttattgaatgaatctaaaacatgaatttttgcttataatagtga 2128494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 32833738 - 32833789
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||| ||| ||||||| ||| |||||||||||| ||||||||||||||||||    
T  32833738 atgtagttcataatatggaccacatacatcattaattgaattaatctaaaaa 32833789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 36566705 - 36566768
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||| |||| ||||||||||||||||| ||||||||||  ||| |||| ||||||| |||||    
T  36566705 atatagcctacctacatcatttattgaatgaatctaaaaagaaaacttttgcttataatagtga 36566768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 40470489 - 40470544
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    |||||||||||||| ||||||| ||||| |||||||||| |||| |||| ||||||    
T  40470489 tatagactacatacgtcatttaatgaatgaatctaaaaatcaaacttttgcttata 40470544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 42595795 - 42595846
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| ||||||| ||| |||||||||||| ||||||| ||||||||||    
T  42595795 atgtggtttataatatggaccacatacatcattaattgaatgaatctaaaaa 42595846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 7672760 - 7672802
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||    
T  7672760 ataatatagactacataaatcattaattgaatgaatctaaaaa 7672802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 23444331 - 23444381
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||||| |||||| |||||| |||||||||||| ||||| |||||||||    
T  23444331 atgtggttaataataaagactatatacatcatttaatgaatgaatctaaaa 23444381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 21970571 - 21970514
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    ||||| ||||||||||||||||||||||| ||| |||||   ||| ||||||||||||    
T  21970571 atatatactacatacatcatttattgaatgaatataaaatgtaaacttttacttataa 21970514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 21993007 - 21992950
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    ||||| ||||||||||||||||||||||| ||| |||||   ||| ||||||||||||    
T  21993007 atatatactacatacatcatttattgaatgaatataaaatgtaaacttttacttataa 21992950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 29241548 - 29241589
Alignment:
Q  29 taatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||||| | |||||||||||||||||| ||||||||||    
T  29241548 taatatagaccaaatacatcatttattgaatgaatctaaaaa 29241589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 39964367 - 39964326
Alignment:
Q  29 taatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||    
T  39964367 taatatagactacatacataatttattcaatgaatctaaaaa 39964326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 49562115 - 49562066
Alignment:
Q  21 gtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||| ||||||||||| ||||||| |||| ||||||| ||||||||||    
T  49562115 gtggttcataatatagaccacatacaacattaattgaataaatctaaaaa 49562066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 3447589 - 3447629
Alignment:
Q  29 taatatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||||| |||||||||| ||||||||||| |||||||||    
T  3447589 taatataggctacatacattatttattgaataaatctaaaa 3447629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 13900299 - 13900259
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    ||||||||| |||| |||||||||||||| |||||||||||    
T  13900299 atatagactgcataaatcatttattgaatgaatctaaaaaa 13900259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 17109330 - 17109278
Alignment:
Q  35 agactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    ||||||||||| ||||||| ||||||||||||||||  ||| |||| ||||||    
T  17109330 agactacatacgtcatttaatgaattaatctaaaaattaaatttttgcttata 17109278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 26367543 - 26367583
Alignment:
Q  29 taatatagactacatacatcatttattgaattaatctaaaa 69  Q
    ||||| |||| |||||||||||||||||||| |||||||||    
T  26367543 taataaagaccacatacatcatttattgaatgaatctaaaa 26367583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 27102165 - 27102217
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||  ||||||||||  |||||||| ||||||||||| |||||||||||    
T  27102165 atgtggtctataatatagaacacatacattatttattgaatgaatctaaaaaa 27102217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 47931747 - 47931799
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| ||| ||| |||||||||||||||| ||||||| || ||||||||    
T  47931747 atgtggttcatattatggactacatacatcattaattgaataaacctaaaaaa 47931799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 54680547 - 54680599
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    ||||| || ||||||| |||||||||||||||| ||||||| || ||||||||    
T  54680547 atgtgattcataatatggactacatacatcattaattgaatgaacctaaaaaa 54680599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 4e-18; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 45472480 - 45472409
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatgg 102  Q
    ||||||||||||||||||||||||||||| ||| ||||||  ||| |||||||||||| |||||||||||||    
T  45472480 atatagactacatacatcatttattgaatgaatttaaaaagtaaatttttacttataatagtgatcgaatgg 45472409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 25899909 - 25899983
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||| ||||||||| ||||||| | ||| |||||||||| |||| |||||||||||  |||||||||||||||||    
T  25899909 tataaactacatacgtcatttaataaataaatctaaaaatcaaacttttacttatattagtgatcgaatggtgta 25899983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 44094870 - 44094938
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaa 99  Q
    |||||||||||||||| |||||||| ||| ||| |||||||| || |||| ||||||| ||||||||||    
T  44094870 atatagactacatacaacatttattaaatgaatttaaaaaacgaacttttgcttataatagtgatcgaa 44094938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 9071287 - 9071237
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||||| ||| |||||||||||||||||||| ||||||| |||||||||    
T  9071287 atgtggtttatattatagactacatacatcattaattgaatgaatctaaaa 9071237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 14952835 - 14952778
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    ||||||||||||| ||||||||||||||| ||| |||||| |||| |||| |||||||    
T  14952835 atatagactacatgcatcatttattgaatgaatttaaaaagcaaacttttgcttataa 14952778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 23992447 - 23992512
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcg 97  Q
    |||||||||||||| ||||||| ||||  |||||||||| |||| |||||||||||  ||||||||    
T  23992447 tatagactacatacgtcatttaatgaacgaatctaaaaatcaaatttttacttatattagtgatcg 23992512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 18731341 - 18731405
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaaca-aagttttacttataacagtgat 95  Q
    |||||||||||||||| ||||||||||| ||||||||||| | || |||| ||||||| ||||||    
T  18731341 tatagactacatacattatttattgaatgaatctaaaaaaaagaacttttgcttataatagtgat 18731405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 41824331 - 41824267
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgat 95  Q
    ||||| ||||||||||| ||||||||||| |||||||||||  || |||| ||||||| ||||||    
T  41824331 atataaactacatacataatttattgaatgaatctaaaaaatgaatttttgcttataatagtgat 41824267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 32143464 - 32143551
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||||||| || ||| |||||| |||| ||||| ||||||| ||| |||||   |||||||| ||||||||||||| || ||||||||    
T  32143464 atgtggtttatgataaagactatatacttcattaattgaatgaatttaaaatgtaaagttttgcttataacagtgaccgcatggtgta 32143551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 70
Target Start/End: Original strand, 44274615 - 44274650
Alignment:
Q  35 agactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||||||||||||||||||||||| ||||||||||    
T  44274615 agactacatacatcatttattgaatgaatctaaaaa 44274650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 44274612 - 44274574
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  44274612 atatagactacatatatcatttattgaatgaatctaaaa 44274574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 15446850 - 15446923
Alignment:
Q  33 atagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||||||| |||||||||||| | ||| || ||||||||  || |||||||||||| ||||| |||||| ||||    
T  15446850 atagactatatacatcatttaataaatgaacctaaaaaatgaatttttacttataatagtgaccgaatgatgta 15446923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 27331826 - 27331867
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||| ||||||||||||||||| ||||||| |||||||||    
T  27331826 ataataaagactacatacatcattaattgaatgaatctaaaa 27331867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 32630477 - 32630514
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  32630477 tatagactacatacatcatttaatgaataaatctaaaa 32630514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 10041600 - 10041640
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaat 59  Q
    |||||||| ||||||||||| |||||||||||| |||||||    
T  10041600 atgtggtttataatatagaccacatacatcattaattgaat 10041640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 11093599 - 11093535
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatc 96  Q
    ||||||| |||||||||||||| ||||| ||||||||| |   | |||||||||||| |||||||    
T  11093599 tatagaccacatacatcatttaatgaatcaatctaaaatattgatttttacttataatagtgatc 11093535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 23378001 - 23377949
Alignment:
Q  42 atacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||||||| ||||||| |||||||||  |||||||||||| |||| |||||    
T  23378001 atacatcattaattgaatgaatctaaaatgcaaagttttactaataatagtga 23377949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 33618258 - 33618306
Alignment:
Q  22 tggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||| |||||||||||||||||||||||| | ||||| || |||||||    
T  33618258 tggttcataatatagactacatacatcattaaatgaataaacctaaaaa 33618306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 38721465 - 38721413
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| ||| ||||||| |||||||||||| ||||||| || ||||||||    
T  38721465 atgtggttcatattatagaccacatacatcattaattgaataaacctaaaaaa 38721413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 41824330 - 41824386
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    |||||||| |||||||||||||||||||| || |||||||   || |||||||||||    
T  41824330 atatagaccacatacatcatttattgaatgaacctaaaaagtcaatttttacttata 41824386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 33070234 - 33070172
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||    
T  33070234 tatagactacatacatcatttaatgaatgaatctaaaatacaaagttttgcttataacagtga 33070172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 42749124 - 42749069
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    |||||||||||||||||||||| ||||| |||||||||| |||| |||| ||||||    
T  42749124 tatagactacatacatcatttaatgaatgaatctaaaaatcaaacttttgcttata 42749069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 40640347 - 40640285
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    ||||||| || ||||||||||| ||||| ||||||||| |||||||||| ||||||| |||||    
T  40640347 tatagaccacgtacatcatttaatgaatgaatctaaaatacaaagttttgcttataatagtga 40640285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 44319600 - 44319674
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||||||||||||||||||||| | ||||| ||||||| |  || |||| ||||||| |||||||| ||||||||    
T  44319600 tatagactacatacatcatttaataaattattctaaaatattaatttttgcttataatagtgatcggatggtgta 44319674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 6189701 - 6189742
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaa 69  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  6189701 ataatatagactaaatacatcatttattgaatgaatctaaaa 6189742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 13841915 - 13841842
Alignment:
Q  34 tagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgtag 107  Q
    ||||||| |||||||||||||||||| ||| ||||||  ||| |||| ||||||| ||||| ||||||| ||||    
T  13841915 tagactaaatacatcatttattgaatgaatttaaaaagtaaatttttgcttataatagtgaccgaatggagtag 13841842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 5419597 - 5419545
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| ||||||| |||||||||||||||| ||||||| || ||||||||    
T  5419597 atgtggttcataatatggactacatacatcattgattgaatgaacctaaaaaa 5419545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 14700312 - 14700383
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggt 103  Q
    ||||||| |||||||| ||||| | ||| ||||||||| ||||| |||||||||||| ||||| || |||||    
T  14700312 tatagaccacatacattatttaataaatgaatctaaaatacaaaattttacttataatagtgaccggatggt 14700383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 24418950 - 24418989
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  24418950 atatagacgacatacatcatttattgaatgaatctaaaaa 24418989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 34326303 - 34326378
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||| ||| |||||| |||||| |||||||||| ||||||| ||| |||||  |||| |||||||||||| |||||    
T  34326303 atgttgtttataataaagactatatacatcattaattgaatgaatgtaaaatgcaaaattttacttataatagtga 34326378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 36308061 - 36308100
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  36308061 atatagactgcatacatcatttattgaatgaatctaaaaa 36308100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 36916665 - 36916590
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||||  |||||| |||||| ||| |||||| ||||||| |||||||||  |||| |||||||||||| |||||    
T  36916665 atgtggtctataataaagactaaatatatcattaattgaataaatctaaaatgcaaaattttacttataatagtga 36916590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 13029391 - 13029341
Alignment:
Q  37 actacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    ||||||||||||||||| ||||| |||||||||| |||| |||| ||||||    
T  13029391 actacatacatcatttaatgaatgaatctaaaaatcaaacttttgcttata 13029341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 24287854 - 24287792
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    ||||||| | |||||||||||| ||||| |||||||||  ||||||||| ||||||| |||||    
T  24287854 tatagaccatatacatcatttaatgaatgaatctaaaatgcaaagttttgcttataatagtga 24287792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 29360807 - 29360761
Alignment:
Q  42 atacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    |||||||||||| ||||| ||||||||| |||||||||| |||||||    
T  29360807 atacatcatttaatgaatgaatctaaaatacaaagtttttcttataa 29360761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 37716153 - 37716219
Alignment:
Q  40 acatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||||||||||| |||||||  |||||||||| ||| ||||| ||||| |||||| || ||||||||    
T  37716153 acatacatcattaattgaatgtatctaaaaaataaatttttatttatatcagtgaccggatggtgta 37716219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 92911 - 92964
Alignment:
Q  34 tagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    |||||||||||| ||||||| ||||| |||||||||| |||| |||| ||||||    
T  92911 tagactacatacgtcatttaatgaataaatctaaaaatcaaacttttgcttata 92964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 10983907 - 10983850
Alignment:
Q  42 atacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaa 99  Q
    |||||||||||||||||| ||||||||| |  || |||||||| ||||| ||||||||    
T  10983907 atacatcatttattgaatgaatctaaaagaggaacttttacttgtaacactgatcgaa 10983850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 13964492 - 13964451
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaa 69  Q
    ||||||||||| |||||||||||||||||||| ||| |||||    
T  13964492 ataatatagaccacatacatcatttattgaatgaatttaaaa 13964451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 15936270 - 15936217
Alignment:
Q  34 tagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    ||||| |||||||||||||||||||||||| ||||| | ||| |||| ||||||    
T  15936270 tagacaacatacatcatttattgaattaatataaaatataaatttttgcttata 15936217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 19293074 - 19293123
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaa 68  Q
    |||||||| ||| ||||||| |||||||||||| ||||||| ||||||||    
T  19293074 atgtggtttatattatagaccacatacatcattgattgaatgaatctaaa 19293123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 92909 - 92857
Alignment:
Q  35 agactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    ||||||||||| |||||||  ||||||||||||||| |||| |||| ||||||    
T  92909 agactacatacgtcatttaacgaattaatctaaaaatcaaacttttgcttata 92857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 17087421 - 17087369
Alignment:
Q  35 agactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    ||||||||||| ||||||| ||||| |||||||||| |||| |||| ||||||    
T  17087421 agactacatacgtcatttaatgaatgaatctaaaaatcaaacttttgcttata 17087369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 24287852 - 24287912
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    |||||| |||| | |||||||||| | ||||| |||||||||  |||||||||||||||||    
T  24287852 ataataaagaccatatacatcattaactgaataaatctaaaatgcaaagttttacttataa 24287912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 36308053 - 36307997
Alignment:
Q  40 acatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatc 96  Q
    |||||||||||||||||||| || ||||||||  || ||||| |||||| |||||||    
T  36308053 acatacatcatttattgaatgaacctaaaaaatcaacttttatttataatagtgatc 36307997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 42666175 - 42666227
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| ||||||||||| |||||||||||| | ||||| || ||||||||    
T  42666175 atgtggttcataatatagaccacatacatcattaaatgaatgaacctaaaaaa 42666227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 39940556 - 39940622
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcg 97  Q
    ||||||||||||||||| ||||||||||| ||||||||||  ||| |||||||||||| ||||||||    
T  39940556 atatagactacatacattatttattgaatgaatctaaaaagtaaatttttacttataatagtgatcg 39940622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 47753 - 47812
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    |||||| ||||||||||||||||||| ||||| |||||||||| ||||||||| ||||||    
T  47753 ataataaagactacatacatcatttaatgaatgaatctaaaaatcaaagttttgcttata 47812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 11989376 - 11989454
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||||| ||||||||||||||||||| ||||| |||||||||| |||| |||| ||||||  ||||| || ||||||||    
T  11989376 ataataaagactacatacatcatttaatgaatgaatctaaaaatcaaacttttgcttatattagtgaccggatggtgta 11989454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 9902638 - 9902570
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaa 99  Q
    |||||||| |||||||||||||| | |||||| |||||||   || |||||||||||||||||||||||    
T  9902638 atatagaccacatacatcatttaataaattaacctaaaaagttaatttttacttataacagtgatcgaa 9902570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 41563079 - 41563027
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| ||||||| |||||||||||||||||||||||| || ||||||||    
T  41563079 atgtggtttataatatggactacatacatcatttattgaatgaacctaaaaaa 41563027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 38834681 - 38834618
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||||||| |||||||||||||| ||| ||||||||||| ||| |||| ||||||| |||||    
T  38834681 atatagactatatacatcatttatttaatgaatctaaaaaataaatttttgcttataatagtga 38834618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 10256851 - 10256785
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcg 97  Q
    |||||||| |||||||||||||||||||| ||||||||||   || |||| ||||||| ||||||||    
T  10256851 atatagaccacatacatcatttattgaatgaatctaaaaagtgaattttttcttataatagtgatcg 10256785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 38824349 - 38824399
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||||| ||||||||||| |||||||||||| ||||||| |||||||||    
T  38824349 atgtggttcataatatagaccacatacatcattaattgaatgaatctaaaa 38824399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 19580263 - 19580303
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  19580263 atatacactacatacatcatttattgaatgaatctaaaaaa 19580303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 29673862 - 29673914
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||| ||| |||||||||||||||||||||||| | ||||| |||||||||||    
T  29673862 atgttgttcataatatagactacatacatcattaaatgaatgaatctaaaaaa 29673914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 36164028 - 36163988
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  36164028 atataaactacatacatcatttattgaataaatctaaaaaa 36163988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 19175670 - 19175595
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||||| || | |||||| |||||||||||||||||||| || |||||||   || |||||||||||| |||||    
T  19175670 atgtggttcattaaatagaccacatacatcatttattgaatgaacctaaaaagtgaaattttacttataatagtga 19175595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 29302136 - 29302191
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    |||||||||||||| ||||||| ||||| |||||||||| |||| |||| ||||||    
T  29302136 tatagactacatacgtcatttaatgaatgaatctaaaaatcaaatttttgcttata 29302191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 31909831 - 31909780
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| ||||||||||| |||||||||||| ||||||| || |||||||    
T  31909831 atgtggtttataatatagaccacatacatcattaattgaatgaacctaaaaa 31909780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 37255208 - 37255157
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| ||||||| ||| |||||||||||| ||||||| ||||||||||    
T  37255208 atgtggttaataatatggaccacatacatcattaattgaatgaatctaaaaa 37255157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 45925326 - 45925275
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| ||||||||||| |||||||||||| | ||||| ||||||||||    
T  45925326 atgtggttcataatatagaccacatacatcattaaatgaatgaatctaaaaa 45925275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 47446701 - 47446740
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  47446701 atatagactacatacatcatttattgaatgaatttaaaaa 47446740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 5246213 - 5246251
Alignment:
Q  33 atagactacatacatcatttattgaattaatctaaaaaa 71  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  5246213 atagactacatacatcatttattcaatgaatctaaaaaa 5246251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 7461325 - 7461395
Alignment:
Q  18 catgtggttgataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    ||||||||  |||||| |||| |  ||||||||| ||| ||| ||||||||| ||||||||||||||||||    
T  7461325 catgtggtgtataataaagacaatgtacatcattaattaaatgaatctaaaatacaaagttttacttataa 7461395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 11989378 - 11989316
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||||||||||| ||||||| ||||| || ||||||| |||| |||| |||||| ||||||    
T  11989378 tatagactacatacgtcatttaatgaatgaacctaaaaatcaaacttttgcttatatcagtga 11989316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 34597587 - 34597521
Alignment:
Q  34 tagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaat 100  Q
    ||||| ||||||||||||| |||||| ||||||||||   || |||| ||||||| |||||||||||    
T  34597587 tagaccacatacatcatttgttgaatgaatctaaaaagtgaatttttgcttataatagtgatcgaat 34597521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 39216172 - 39216110
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    ||||||| |||||||||||| ||||||| | |||||||  ||||||||| ||||||| |||||    
T  39216172 tatagacaacatacatcattaattgaatgagtctaaaatgcaaagttttgcttataatagtga 39216110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 24807963 - 24808000
Alignment:
Q  33 atagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  24807963 atagactgcatacatcatttattgaatgaatctaaaaa 24808000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 39075916 - 39075863
Alignment:
Q  34 tagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    |||||||||||||||||||| ||||| |||||||||  |||| |||| ||||||    
T  39075916 tagactacatacatcatttaatgaatgaatctaaaattcaaacttttgcttata 39075863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 39075981 - 39076034
Alignment:
Q  34 tagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    |||||||||||||||||||| ||||| |||||||||  |||| |||| ||||||    
T  39075981 tagactacatacatcatttaatgaatgaatctaaaattcaaacttttgcttata 39076034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 42761524 - 42761589
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcg 97  Q
    ||||||||| |||||||||||| ||||| |||| |||| | |||||||| ||||||| ||| ||||    
T  42761524 tatagactatatacatcatttaatgaatgaatcaaaaataaaaagttttgcttataatagtaatcg 42761589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 5431413 - 5431449
Alignment:
Q  34 tagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  5431413 tagaccacatacatcatttattgaatgaatctaaaaa 5431449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 25378315 - 25378367
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| ||||||| ||| |||||||||||| ||||||| || ||||||||    
T  25378315 atgtggttcataatattgaccacatacatcattaattgaatgaacctaaaaaa 25378367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 31998250 - 31998182
Alignment:
Q  40 acatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgtagt 108  Q
    |||||||||||||| | ||| ||| ||||| |||||||||| ||||||| ||||| |||| | ||||||    
T  31998250 acatacatcatttaataaatgaatataaaatacaaagttttgcttataatagtgaccgaaggatgtagt 31998182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 42660425 - 42660493
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaa 99  Q
    |||||||| |||||||||||||||||||| | | |||||||  || |||| ||||||| ||||| ||||    
T  42660425 atatagaccacatacatcatttattgaatgattttaaaaaatgaacttttgcttataatagtgaccgaa 42660493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 42915717 - 42915677
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    ||||||||||||| ||||||||||||||| || ||||||||    
T  42915717 atatagactacatgcatcatttattgaatgaacctaaaaaa 42915677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 45239049 - 45239089
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaat 59  Q
    |||||||| ||||||||||| |||||||||||| |||||||    
T  45239049 atgtggttcataatatagaccacatacatcattaattgaat 45239089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 12171313 - 12171394
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgtagtaatta 113  Q
    |||||||||||||||||||||| | ||| |||||||||| |||| |||||||||||  ||||| || |||||||| ||||||    
T  12171313 tatagactacatacatcatttaataaatgaatctaaaaatcaaatttttacttatattagtgaccggatggtgtattaatta 12171394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 30138855 - 30138930
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggt 103  Q
    |||||| |||||| |||||||||| ||||||| |||||||||   ||| ||||||||||||||||||||| |||||    
T  30138855 ataataaagactatatacatcattaattgaatgaatctaaaatgtaaatttttacttataacagtgatcggatggt 30138930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 23797417 - 23797343
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||||||||||||||||||||| ||||| |||||||||  |||| |||| ||||||| ||||| |||| ||||||    
T  23797417 tatagactacatacatcatttaatgaatgaatctaaaatgcaaaattttgcttataatagtgaccgaagggtgta 23797343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 31319587 - 31319661
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    ||||||||||||||||||||| |||||| ||||||||||| | | |||| ||||||| |||||||| | ||||||    
T  31319587 tatagactacatacatcattttttgaatgaatctaaaaaatatatttttccttataatagtgatcggagggtgta 31319661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 8169166 - 8169205
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  8169166 atatagactacatacatcatttattgaatgaatctaaaaa 8169205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 8595216 - 8595161
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||| |||| ||||||    
T  8595216 tatagactacatacatcatttaatgaatgaatctaaaaaataaattttttcttata 8595161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 11602837 - 11602876
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  11602837 atatagactacatacatcatttattgaatgaatctaaaaa 11602876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 32599733 - 32599694
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  32599733 atatagactacatacatcatttattgaatgaatctaaaaa 32599694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 37491343 - 37491280
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    ||||||||||||||||||||||||| ||| ||||||||||  ||| |||| ||||||| |||||    
T  37491343 atatagactacatacatcatttatttaataaatctaaaaagtaaatttttgcttataatagtga 37491280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 43813207 - 43813132
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||||  ||| |||||||||||||| ||||||||||||| ||||||||||  ||| |||| ||||||| |||||    
T  43813207 atgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaattaaatttttgcttataatagtga 43813132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 46648418 - 46648359
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    |||||| ||||||||||||||||||| ||||| |||||||||| |||| |||| ||||||    
T  46648418 ataataaagactacatacatcatttaatgaatgaatctaaaaatcaaatttttgcttata 46648359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 18819999 - 18820039
Alignment:
Q  29 taatatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  18819999 taatatagacaacatacatcatttattgaatgaatctaaaa 18820039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 22281883 - 22281931
Alignment:
Q  40 acatacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    |||||||||||||| ||||| ||||||||| |||||||||| |||||||    
T  22281883 acatacatcatttaatgaataaatctaaaatacaaagttttgcttataa 22281931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 35593723 - 35593671
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| ||||||| ||| |||||||||||| ||||||| |||||||||||    
T  35593723 atgtggttcataatatggaccacatacatcattaattgaataaatctaaaaaa 35593671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 37101756 - 37101708
Alignment:
Q  40 acatacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    |||||||||||||| ||||| |||||||||  |||||||||||||||||    
T  37101756 acatacatcatttaatgaatgaatctaaaatgcaaagttttacttataa 37101708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 44234254 - 44234202
Alignment:
Q  49 atttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatg 101  Q
    ||||||||||| ||| ||||||| ||| ||||||||||||||||| |||||||    
T  44234254 atttattgaatgaatttaaaaaataaaattttacttataacagtggtcgaatg 44234202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 2360518 - 2360463
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    |||||||||||||| ||||||| ||||| |||||||||| |||| |||| ||||||    
T  2360518 tatagactacatacgtcatttaatgaatgaatctaaaaatcaaatttttgcttata 2360463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 20353135 - 20353186
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| |||| || |||||||||||||||| ||||||| ||||||||||    
T  20353135 atgtggttcataacatggactacatacatcattaattgaatgaatctaaaaa 20353186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 21099313 - 21099376
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    ||||||||||||||| ||||||||||||| ||| ||||||   || |||||||||||| |||||    
T  21099313 atatagactacatacgtcatttattgaatgaatataaaaagtgaacttttacttataatagtga 21099376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 27163247 - 27163196
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| ||||||||||| |||||||||||||||| ||| || |||||||    
T  27163247 atgtggtttataatatagaccacatacatcatttattcaatgaacctaaaaa 27163196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 5977900 - 5977862
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  5977900 tatagaccacatacatcgtttattgaattaatctaaaaa 5977862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 10599071 - 10599125
Alignment:
Q  40 acatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||||||||||||||||| || |||||||| | | |||||||||||| |||||    
T  10599071 acatacatcatttattgaatgaacctaaaaaatagatttttacttataatagtga 10599125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 23797415 - 23797481
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||| |||| | |||||||||| ||||||| |||||||||  |||| |||||||||||| |||||    
T  23797415 ataataaagaccagatacatcattaattgaatgaatctaaaatgcaaaattttacttataatagtga 23797481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 28409637 - 28409603
Alignment:
Q  36 gactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||||||||||||||||||| ||||||||||    
T  28409637 gactacatacatcatttattgaatgaatctaaaaa 28409603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 30457800 - 30457866
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcg 97  Q
    |||||||| ||||||| |||||||||||| ||| ||||||   || |||||||||||| ||||||||    
T  30457800 atatagacaacatacaacatttattgaatgaatttaaaaagtgaacttttacttataatagtgatcg 30457866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 1548836 - 1548913
Alignment:
Q  18 catgtggttgataatatagactacatacatcatttattgaattaatctaa-aaaacaaagttttacttataacagtga 94  Q
    ||||||||  |||||||||||| |||| |||||||| ||||| ||||||| |||| ||||||||   |||||||||||    
T  1548836 catgtggtctataatatagactgcatatatcatttagtgaatgaatctaagaaaataaagttttgtctataacagtga 1548913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 8169167 - 8169110
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    |||||||| |||||||||||||||||||| || ||||||| | || |||| |||||||    
T  8169167 atatagaccacatacatcatttattgaatgaacctaaaaagccaacttttgcttataa 8169110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 25774253 - 25774290
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  25774253 tatagactacatacatcatttagtgaatgaatctaaaa 25774290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 32941844 - 32941885
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||||| ||||||||||||||| ||||||| |||||||||    
T  32941844 ataatataaactacatacatcattgattgaatgaatctaaaa 32941885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 3106014 - 3106054
Alignment:
Q  29 taatatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||||||| |||||||||||||||||||| || ||||||    
T  3106014 taatatagaccacatacatcatttattgaatgaacctaaaa 3106054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 5977905 - 5977941
Alignment:
Q  35 agactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||| |||||||||||||||||||||||| |||||||    
T  5977905 agaccacatacatcatttattgaattaatttaaaaaa 5977941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 8571451 - 8571375
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgtagt 108  Q
    |||||||||||||  ||||||| ||||| |||||||||| |||| |||| ||||||  ||||| || | ||||||||    
T  8571451 tatagactacatatgtcatttaatgaatgaatctaaaaatcaaacttttgcttatattagtgaccggagggtgtagt 8571375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 18654627 - 18654679
Alignment:
Q  42 atacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||||||||||| ||| ||||||||||| ||| || ||||||||| |||||    
T  18654627 atacatcatttattaaataaatctaaaaaataaacttgtacttataatagtga 18654679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 21387658 - 21387606
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||  |||||| ||||||||||||||||| ||||||| |||||| ||||    
T  21387658 atgtggtatataataaagactacatacatcattaattgaatgaatctagaaaa 21387606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 33471548 - 33471600
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| ||| ||||||| |||||||||||| ||||||| || ||||||||    
T  33471548 atgtggttcatattatagaccacatacatcattaattgaatgaacctaaaaaa 33471600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 38940289 - 38940357
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaa 99  Q
    ||||||||||||||||||||||||| ||| ||| ||||||   || ||||| |||||| ||| ||||||    
T  38940289 atatagactacatacatcatttattaaatgaatttaaaaagtgaatttttaattataatagtaatcgaa 38940357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 45002154 - 45002202
Alignment:
Q  40 acatacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    ||||||| |||||| ||||| |||||||||  |||||||||||||||||    
T  45002154 acatacaccatttaatgaatgaatctaaaatgcaaagttttacttataa 45002202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 47535038 - 47535078
Alignment:
Q  29 taatatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||| ||| |||||||||||||||||||| |||||||||    
T  47535038 taatatggaccacatacatcatttattgaatgaatctaaaa 47535078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 1100115 - 1100184
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    |||||||  |||||| ||||||||||||||||||| |||||||||||||||  ||||||||| |||||||    
T  1100115 atgtggtctataataaagactacatacatcatttaatgaattaatctaaaatgcaaagttttgcttataa 1100184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 14772613 - 14772679
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||| |||||| |||||||||| ||||||||||||||||| | |||||||| ||||||| |||||    
T  14772613 ataataaagactatatacatcattaattgaattaatctaaaatataaagttttgcttataatagtga 14772679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 1098698 - 1098634
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgat 95  Q
    |||||||| |||||||||||||||||||| ||||||||||   || |||||||||||| ||||||    
T  1098698 atatagaccacatacatcatttattgaatgaatctaaaaagtcaacttttacttataatagtgat 1098634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 37685028 - 37685080
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| |||||||||||||||||||| ||| ||||||| |||||||||||    
T  37685028 atgtggttcataatatagactacatacattattaattgaatgaatctaaaaaa 37685080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 1098697 - 1098760
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    ||||||||||||||||| ||||||| ||| ||||||||||| ||| |||| ||||||| |||||    
T  1098697 atatagactacatacattatttattaaatgaatctaaaaaataaacttttgcttataatagtga 1098760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 2673905 - 2673956
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||  |||||||||||||||| ||||||||||||||| ||||||||||    
T  2673905 atgtggtctataatatagactacatgcatcatttattgaataaatctaaaaa 2673956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 12295734 - 12295785
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||| ||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  12295734 atgtcgtttataatatagactacatacattatttattgaatgaatctaaaaa 12295785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 38370456 - 38370382
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||||||||||||||||||||| ||||  |||||||||  ||||| |||  |||||| |||||||||||| ||||    
T  38370456 tatagactacatacatcatttaatgaacgaatctaaaatgcaaagatttgtttataatagtgatcgaatgatgta 38370382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 3100474 - 3100437
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||||||||||||||||||||||||| |||||||||    
T  3100474 tatagactacatacatcatttattgaatgaatctaaaa 3100437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 1996916 - 1996840
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgtagt 108  Q
    |||||||||||||| ||||||| ||||| |||||||||| |||| |||| ||||||  ||||| || | ||||||||    
T  1996916 tatagactacatacgtcatttaatgaatgaatctaaaaatcaaatttttgcttatattagtgaccggagggtgtagt 1996840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 10495284 - 10495224
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    |||||||| || |||||||||||||||||||| |||||||||||  ||  |||||||||||    
T  10495284 ataatataaaccacatacatcatttattgaatgaatctaaaaaatcaaaatttacttataa 10495224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 14571090 - 14571038
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| ||||||| ||| |||||||||||| ||||||| |||||||||||    
T  14571090 atgtggttcataatatggaccacatacatcattaattgaatgaatctaaaaaa 14571038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 19216343 - 19216395
Alignment:
Q  18 catgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||||||  |||||||||||||||| ||||||||||||||| || |||||||    
T  19216343 catgtggtccataatatagactacatgcatcatttattgaataaaactaaaaa 19216395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 20019818 - 20019874
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    ||||||||||||||| ||||||| ||||| |||||||||| |||| |||| ||||||    
T  20019818 atatagactacatacgtcatttaatgaatgaatctaaaaatcaaacttttgcttata 20019874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 27895967 - 27895927
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    ||||||||||||||||||||||||| ||| |||||||||||    
T  27895967 atatagactacatacatcatttattaaatgaatctaaaaaa 27895927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 35067998 - 35067950
Alignment:
Q  22 tggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||| |||||||||||||||||||||||| ||||||| || |||||||    
T  35067998 tggttcataatatagactacatacatcattaattgaatgaacctaaaaa 35067950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 35942145 - 35942077
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatc 96  Q
    |||||||||||||||||| | ||||||||||| ||  |||| || |||||||| ||||||| |||||||    
T  35942145 ataatatagactacatacgtaatttattgaataaacttaaagaataaagttttgcttataatagtgatc 35942077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 36895308 - 36895344
Alignment:
Q  33 atagactacatacatcatttattgaattaatctaaaa 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  36895308 atagactacatacatcatttattgaatgaatctaaaa 36895344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 37554405 - 37554457
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| |||||||| ||||||||||| ||| ||||||| |||||||||||    
T  37554405 atgtggttcataatataaactacatacattattaattgaatgaatctaaaaaa 37554457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 7313901 - 7313838
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||||||||||| |||||||||||||| ||| ||||||   || |||||||||||| |||||    
T  7313901 atatagactacatatatcatttattgaatgaatttaaaaagtgaacttttacttataaaagtga 7313838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 15966038 - 15965987
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| ||||||||||| |||||||||||| ||||||| || |||||||    
T  15966038 atgtggtttataatatagaccacatacatcattaattgaatgaacctaaaaa 15965987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 16899760 - 16899689
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaa 99  Q
    |||||||||||||||||| ||||||| | ||| |||||||||| |||| ||||  |||||  ||||||||||    
T  16899760 ataatatagactacatacgtcatttaataaatgaatctaaaaatcaaacttttgtttatattagtgatcgaa 16899689  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 27314544 - 27314489
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    |||||||||||||| ||||||| ||||| |||||||||| |||| |||| ||||||    
T  27314544 tatagactacatacgtcatttaatgaatgaatctaaaaaccaaatttttgcttata 27314489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 35969123 - 35969072
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| ||||||||||| |||||||||||| ||| ||| ||||||||||    
T  35969123 atgtggtttataatatagaccacatacatcattaattaaatgaatctaaaaa 35969072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 40355233 - 40355146
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||||||  |||||||||||  ||| ||||||||||||||| || ||||| ||||||| ||||| || || ||||| |||| ||||||    
T  40355233 atgtggtctataatatagaccgcatgcatcatttattgaatgaacctaaagaacaaagctttacctacaatagtgaccgaagggtgta 40355146  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 20503297 - 20503339
Alignment:
Q  29 taatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||    
T  20503297 taatataaactacatacatcattaattgaattaacctaaaaaa 20503339  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 25358119 - 25358065
Alignment:
Q  40 acatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||| ||||||||||||||| ||||| ||||| ||| |||||||||||| |||||    
T  25358119 acattcatcatttattgaatgaatcttaaaaataaatttttacttataatagtga 25358065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 39785128 - 39785170
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    ||||||||||| |||||||||||||||||||| ||| ||||||    
T  39785128 ataatatagaccacatacatcatttattgaatgaatttaaaaa 39785170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 18942047 - 18942096
Alignment:
Q  22 tggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    ||||| ||||||||||| |||||||||||| ||||||| || ||||||||    
T  18942047 tggttcataatatagaccacatacatcattaattgaatgaacctaaaaaa 18942096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 25408612 - 25408669
Alignment:
Q  30 aatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    |||| |||| |||||||||||||||||||| ||||||||| | ||| |||| ||||||    
T  25408612 aataaagaccacatacatcatttattgaatgaatctaaaacataaatttttgcttata 25408669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 35032339 - 35032302
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  35032339 tatagactacatacatcatttaatgaatgaatctaaaa 35032302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 4913428 - 4913492
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatc 96  Q
    ||||||| ||||||||||||| |||| |  |||||||||| | ||||||  ||||||||||||||    
T  4913428 tatagaccacatacatcatttgttgagtgtatctaaaaaatatagttttgtttataacagtgatc 4913492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 10437697 - 10437645
Alignment:
Q  42 atacatcatttattgaattaatctaaaaaacaaagttttacttataacagtga 94  Q
    |||||||| | ||||||| ||| ||||| |||||||||||||||||| |||||    
T  10437697 atacatcactaattgaatgaatttaaaatacaaagttttacttataatagtga 10437645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 14416488 - 14416436
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    ||||| || ||||||| ||| |||||||||||| ||||||| |||||||||||    
T  14416488 atgtgatttataatatggaccacatacatcattaattgaatgaatctaaaaaa 14416436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 22650925 - 22650869
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    ||||||| |||||||||||||| | ||| ||||||||| ||||| |||| |||||||    
T  22650925 tatagaccacatacatcatttaataaatgaatctaaaatacaaaattttgcttataa 22650869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 25713768 - 25713808
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| ||||| |||||||||||||| |||||||||||    
T  25713768 atatagaccacatatatcatttattgaatgaatctaaaaaa 25713808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 34102157 - 34102105
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaaa 71  Q
    |||||||| ||||||| |||||||||||||||| ||| ||| || ||||||||    
T  34102157 atgtggttcataatatggactacatacatcattaattcaatgaacctaaaaaa 34102105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 34867625 - 34867677
Alignment:
Q  35 agactacatacatcatttattgaattaatctaaaaaacaaagttttacttata 87  Q
    ||||| ||||||||||||| | ||| |||||||||  ||||||||||||||||    
T  34867625 agactgcatacatcatttaataaatgaatctaaaatgcaaagttttacttata 34867677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000004; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 8449650 - 8449569
Alignment:
Q  25 ttgataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    ||||| |||||||| |||||||||||||||||||| |||| |||| |  || |||| ||||||| |||||||| ||||||||    
T  8449650 ttgattatatagaccacatacatcatttattgaataaatccaaaatattaatttttgcttataatagtgatcggatggtgta 8449569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 8458454 - 8458373
Alignment:
Q  25 ttgataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    ||||| |||||||| |||||||||||||||||||| |||| |||| |  || |||| ||||||| |||||||| ||||||||    
T  8458454 ttgattatatagaccacatacatcatttattgaataaatccaaaatattaatttttgcttataatagtgatcggatggtgta 8458373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 13463003 - 13462927
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgtag 107  Q
    ||||||| |||||||||||||||||||||  ||||||||| |||| |||| ||| ||| ||||| || | |||||||    
T  13463003 atatagattacatacatcatttattgaatggatctaaaaagcaaacttttgcttctaatagtgaccggagggtgtag 13462927  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 32254888 - 32254968
Alignment:
Q  28 ataatatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgtagt 108  Q
    |||||| |||| |||||||||||||| ||||| ||||||||| |  || |||| ||||||| |||||||| | ||||||||    
T  32254888 ataataaagaccacatacatcatttaatgaatgaatctaaaatattaacttttgcttataatagtgatcggagggtgtagt 32254968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 14173472 - 14173421
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||  ||| |||||||||||||| ||||||||||||| ||||||||||    
T  14173472 atgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaa 14173421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 14178008 - 14177957
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||  ||| |||||||||||||| ||||||||||||| ||||||||||    
T  14178008 atgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaa 14177957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 12383658 - 12383584
Alignment:
Q  32 tatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataacagtgatcgaatggtgta 106  Q
    |||||||||||||||||||| |  |||| ||| |||||   ||| |||||||||||| ||||| |||||||||||    
T  12383658 tatagactacatacatcattaaccgaatgaatttaaaatgtaaatttttacttataatagtgaacgaatggtgta 12383584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 24111169 - 24111226
Alignment:
Q  31 atatagactacatacatcatttattgaattaatctaaaaaacaaagttttacttataa 88  Q
    ||||| |||| |||||||||||||||||| ||||||||||   || ||||||||||||    
T  24111169 atataaactatatacatcatttattgaataaatctaaaaattgaacttttacttataa 24111226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 6033034 - 6033074
Alignment:
Q  29 taatatagactacatacatcatttattgaattaatctaaaa 69  Q
    |||||||||||||||||||||||||||| || || ||||||    
T  6033034 taatatagactacatacatcatttattggatgaacctaaaa 6033074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 188 - 239
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| ||| ||||||| |||||||||||||||||||| ||||||||||    
T  188 atgtggttcatattatagaccacatacatcatttattgaatgaatctaaaaa 239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 19875 - 19824
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| ||| ||||||| |||||||||||||||| ||| ||||||||||    
T  19875 atgtggttcatattatagaccacatacatcatttatttaatgaatctaaaaa 19824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 38065 - 38116
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaattaatctaaaaa 70  Q
    |||||||| ||||||||||| |||||||||||| ||||||| || |||||||    
T  38065 atgtggttcataatatagaccacatacatcattaattgaatgaacctaaaaa 38116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 5470 - 5430
Alignment:
Q  19 atgtggttgataatatagactacatacatcatttattgaat 59  Q
    |||||||| ||||||||||| |||||||||||| |||||||    
T  5470 atgtggtttataatatagaccacatacatcattaattgaat 5430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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