View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20617_low_3 (Length: 539)
Name: NF20617_low_3
Description: NF20617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20617_low_3 |
 | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0002 (3 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 485; Significance: 0; HSPs: 34)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 485; E-Value: 0
Query Start/End: Original strand, 18 - 538
Target Start/End: Original strand, 11769233 - 11769753
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11769233 |
ccttgctcaacttgtctacaatgataaagaagttcaacaatattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
11769332 |
T |
|
| Q |
118 |
aggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11769333 |
aggtctctccttgaatcggtcacttcaagaacttgggatagcaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
11769432 |
T |
|
| Q |
218 |
tgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataac |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
11769433 |
tgtttgtgttagatgatatgtggaatgacaattataatgattggggtgaactagtaagtcccttcagtaatggaaaacctggaagcatggtgattataac |
11769532 |
T |
|
| Q |
318 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11769533 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
11769632 |
T |
|
| Q |
418 |
gcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
517 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
11769633 |
gcattgggaagtgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgccgcta |
11769732 |
T |
|
| Q |
518 |
aaacaataggtgggcttctac |
538 |
Q |
| |
|
||||||||| |||||||||| |
|
|
| T |
11769733 |
taacaataggagggcttctac |
11769753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 18 - 538
Target Start/End: Original strand, 9849738 - 9850258
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| |||||||| ||||||||| ||||||||||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
9849738 |
ccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaacc |
9849837 |
T |
|
| Q |
118 |
aggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
217 |
Q |
| |
|
| |||||||||||||||||||||||| | ||| |||||||| |||||||||||| |||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
9849838 |
aagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtccttcgagttgcgttaaagaaaaactcaagggagaaaagatttt |
9849937 |
T |
|
| Q |
218 |
tgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataac |
317 |
Q |
| |
|
|||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
9849938 |
tgtttgtgttggatgatttgtggaatgacaattataatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataac |
9850037 |
T |
|
| Q |
318 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
417 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9850038 |
aacacgccaacaaaaagttgctgaggtggcacacacatttccaatacataaattagatcttctatcaaatgaagattgttggtctttactctcaaagcat |
9850137 |
T |
|
| Q |
418 |
gcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
517 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
9850138 |
gcattgggaagtgatgagtttcaccatagttcaaacacagcccttgaagaaataggcaggaagattgcaagaaagtgtggaggattgccaatagctgcta |
9850237 |
T |
|
| Q |
518 |
aaacaataggtgggcttctac |
538 |
Q |
| |
|
|||||||||| || ||||||| |
|
|
| T |
9850238 |
aaacaataggaggacttctac |
9850258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 18 - 527
Target Start/End: Complemental strand, 10434114 - 10433605
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| |||||||||||||| ||| ||||||| |
|
|
| T |
10434114 |
ccttgcccaacttgtttacaatgataaagaagttcaacaccattttgatttgaaggcctgggcttgtgtgtctcaggattttgatattttgaaagtaacc |
10434015 |
T |
|
| Q |
118 |
aggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
217 |
Q |
| |
|
| |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10434014 |
aagtctctccttgaatcggtcacttccagaacttgggatagcaataatcttgatgtccttcgtgttgagttaaagaaaaactcgagggagaaaagatttt |
10433915 |
T |
|
| Q |
218 |
tgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataac |
317 |
Q |
| |
|
|||||||||| || ||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
10433914 |
tgtttgtgttggacgatctgtggaatgacaattataatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataac |
10433815 |
T |
|
| Q |
318 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
417 |
Q |
| |
|
||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10433814 |
aacgcgccaacaaaaagttgctgaggtggcacacacatttcctatacataaattagaacttctatcaaatgaagattgttggtctttactctcgaagcat |
10433715 |
T |
|
| Q |
418 |
gcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
517 |
Q |
| |
|
|||||||| | |||||||||||||| | ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10433714 |
gcattgggcagtgatgagtttcacctcaatacaaacacaacccttgaagaaataggcagggagattgcaagaaagtgtggaggattgccaattgctgcta |
10433615 |
T |
|
| Q |
518 |
aaacaatagg |
527 |
Q |
| |
|
|||||||||| |
|
|
| T |
10433614 |
aaacaatagg |
10433605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 18 - 538
Target Start/End: Original strand, 9838860 - 9839380
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| |||||||| ||||||||| ||||||||||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
9838860 |
ccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaacc |
9838959 |
T |
|
| Q |
118 |
aggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
217 |
Q |
| |
|
| |||||||||||||||||||||||| | ||| |||||||| |||||||||||| |||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
9838960 |
aagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtccttcgagttgcgttaaagaaaaactcaagggagaaaagatttt |
9839059 |
T |
|
| Q |
218 |
tgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataac |
317 |
Q |
| |
|
|||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
9839060 |
tgtttgtgttggatgatttgtggaatgacaattataatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataac |
9839159 |
T |
|
| Q |
318 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
417 |
Q |
| |
|
||| ||||||| |||||||||||||||||||||||||||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9839160 |
aacgcgccaacaaaaagttgctgaggtggcacacacatttccaatacataaattagatcttctatcaaatgaagattgttggtctttactctcaaagcat |
9839259 |
T |
|
| Q |
418 |
gcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
517 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
9839260 |
gcattgggaagtgatgagtttcaccatagttcaaacacagcccttgaagaaataggcaggaagattgcaagaaagtgtggaggattgccaatagctgcta |
9839359 |
T |
|
| Q |
518 |
aaacaataggtgggcttctac |
538 |
Q |
| |
|
|||||||||| || ||||||| |
|
|
| T |
9839360 |
aaacaataggaggacttctac |
9839380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 18 - 538
Target Start/End: Complemental strand, 10375915 - 10375395
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
10375915 |
ccttgcacaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaacc |
10375816 |
T |
|
| Q |
118 |
aggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
217 |
Q |
| |
|
| |||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||| |||||||||||| | |||||||||||||||| |
|
|
| T |
10375815 |
aagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgatgtccttcgagttgcgttaaagaaaaaatcaagggagaaaagatttt |
10375716 |
T |
|
| Q |
218 |
tgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataac |
317 |
Q |
| |
|
|||||||||| |||||| |||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
10375715 |
tgtttgtgttggatgatttgtggaatgacaattattatgattggggtgaactagtaagtcccttcattgatggaaaacccggaagcatggtgattataac |
10375616 |
T |
|
| Q |
318 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
417 |
Q |
| |
|
||| |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
10375615 |
aacgcgccaacgaaaagttgctaaggtagcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcat |
10375516 |
T |
|
| Q |
418 |
gcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
517 |
Q |
| |
|
|||||||| | ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10375515 |
gcattgggtagtgatgagtttcaccatagttcaaacacaacccttgaagaaataggcaggaagattgcaagaaagtgtggaggattgccaatagctgcta |
10375416 |
T |
|
| Q |
518 |
aaacaataggtgggcttctac |
538 |
Q |
| |
|
|||||||||| || ||||||| |
|
|
| T |
10375415 |
aaacaataggaggacttctac |
10375395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 18 - 538
Target Start/End: Original strand, 10663525 - 10664045
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10663525 |
ccttgcccaacttgtttacaatgataaagaagttcaacaacattttgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaaca |
10663624 |
T |
|
| Q |
118 |
aggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
217 |
Q |
| |
|
| ||||||||||||||| |||||||| | |||||||||||| || |||||||| |||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
10663625 |
aagtctctccttgaatctgtcacttccacaacttgggatagcaaagatcttgatgtccttcgagttgagttaaagaaaatctcgagggagaaaagatttt |
10663724 |
T |
|
| Q |
218 |
tgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataac |
317 |
Q |
| |
|
|||||||||| |||||| |||||||||||| ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10663725 |
tgtttgtgttcgatgatctgtggaatgacaattataatgattggagtgaactagcaagtcccttcattgatggaaaacctggaagcatggtgattataac |
10663824 |
T |
|
| Q |
318 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
417 |
Q |
| |
|
||| ||| ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
10663825 |
aacgcgcgaacaaaaagttgctgaggtggcacacacatttcctatacataaattagaacttctatcaaatgaagattgttggtccttactttcaaagcat |
10663924 |
T |
|
| Q |
418 |
gcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
517 |
Q |
| |
|
|||||||||| || ||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10663925 |
gcattgggaagcgacgagtttcaccatagttcaaacacaacccttgaagaaacaggcaggaagattgcaagaaagtgtggaggattgccaatagctgcta |
10664024 |
T |
|
| Q |
518 |
aaacaataggtgggcttctac |
538 |
Q |
| |
|
||||| |||| || ||||||| |
|
|
| T |
10664025 |
aaacattaggaggacttctac |
10664045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 18 - 536
Target Start/End: Complemental strand, 10363868 - 10363350
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| |
|
|
| T |
10363868 |
ccttgcccaacttgtttacaatgataaagaagttcaacaacattttgatttgaaggcatgggtttgtgtctctgaggattttgatattatgagagtaaca |
10363769 |
T |
|
| Q |
118 |
aggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
217 |
Q |
| |
|
| ||||||||||||||| | |||||| | ||||| ||| || |||||||||||| |||||||||||||||||||||||| || |||||||||||||| || |
|
|
| T |
10363768 |
aagtctctccttgaatctgccacttccataacttcggaaagcaataatcttgatgtccttcgagttgagttaaagaaaatctcgagggagaaaagatatt |
10363669 |
T |
|
| Q |
218 |
tgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataac |
317 |
Q |
| |
|
|||||||||| || ||| |||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10363668 |
tgtttgtgttggacgatctgtggaatgacaattataatgattggggtgaactagtaagccccttcattgatggaaaacctggaagcatggtgattataac |
10363569 |
T |
|
| Q |
318 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
417 |
Q |
| |
|
||| |||||| |||||| |||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10363568 |
aacgcgccaagaaaaagtagctgaggtggcacacacatttcctatacataaattagatcttctatcaaatgaagattgttggactttactctcaaagcat |
10363469 |
T |
|
| Q |
418 |
gcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
517 |
Q |
| |
|
||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10363468 |
gcactgggaaatgatgagtttcacaatagtacaaacacaacccttgaagaaataggcaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
10363369 |
T |
|
| Q |
518 |
aaacaataggtgggcttct |
536 |
Q |
| |
|
||||| |||| || ||||| |
|
|
| T |
10363368 |
aaacactaggaggacttct |
10363350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 18 - 538
Target Start/End: Original strand, 10032002 - 10032522
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10032002 |
ccttgcccaacttgtttacaatgataaagaagttcaacaacattttgatttgaaggcctgggcttgtgtgtctgaggattttgatattatgagagtaaca |
10032101 |
T |
|
| Q |
118 |
aggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
217 |
Q |
| |
|
| ||||||||||||||| |||||||| | ||||| |||||| || |||||||| |||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
10032102 |
aagtctctccttgaatctgtcacttccacaacttcggatagcaaagatcttgatgtccttcgagttgagttaaagaaaatctcgagggagaaaagatttt |
10032201 |
T |
|
| Q |
218 |
tgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataac |
317 |
Q |
| |
|
||||||| || |||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10032202 |
tgtttgttttggatgatctgtggaatgacaattataatgattggggtgaactagtaagtcccttcattgatggaaaacctggaagcatggtgattataac |
10032301 |
T |
|
| Q |
318 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10032302 |
aacacgccaacgaaaagttgctgaggtggcatgcacatttcctatacatgaactaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
10032401 |
T |
|
| Q |
418 |
gcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
517 |
Q |
| |
|
|||||||| | ||||||| |||| |||| | |||| ||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
10032402 |
gcattgggcagtgatgagattcagcataatgcaaatacagcccttgaagaaacaggcaggaagattgcaagaaagtgtggaggattgccaatagctgcca |
10032501 |
T |
|
| Q |
518 |
aaacaataggtgggcttctac |
538 |
Q |
| |
|
||||| | || |||||||||| |
|
|
| T |
10032502 |
aaacacttggagggcttctac |
10032522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 18 - 522
Target Start/End: Original strand, 10260697 - 10261201
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10260697 |
ccttgctcaacttgtttacaatgataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattatgagagtaacc |
10260796 |
T |
|
| Q |
118 |
aggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
217 |
Q |
| |
|
| ||||||||||||||| |||||||| |||| |||||||| ||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
10260797 |
aagtctctccttgaatcagtcacttctagaaattgggatatcaataatcttgacatccttcgagttgagttaaagaaaatctcgagggagaaaagatttt |
10260896 |
T |
|
| Q |
218 |
tgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataac |
317 |
Q |
| |
|
|||||||||| || ||| |||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10260897 |
tgtttgtgttggacgatctgtggaatgacaattataatgattggggtgaactagtaagccccttcgttgatggaaaacctggaagcatggtgattataac |
10260996 |
T |
|
| Q |
318 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
417 |
Q |
| |
|
||| || |||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
10260997 |
aacgcggcaacaaaaagttgctgaggtggcatgcacatttcctatacatgaactaaaacttctatcgaatgaagactgttggtctttactctcaaagcat |
10261096 |
T |
|
| Q |
418 |
gcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
517 |
Q |
| |
|
|||||||| | ||||||| |||| |||| |||||| ||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
10261097 |
gcattgggcagtgatgagattcagcataatacaaatacagcccttgaagaaacaggcaggaagattgcaagaaagtgtggaggattgccaatagctgcca |
10261196 |
T |
|
| Q |
518 |
aaaca |
522 |
Q |
| |
|
||||| |
|
|
| T |
10261197 |
aaaca |
10261201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 18 - 537
Target Start/End: Original strand, 10184241 - 10184760
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||| |||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
10184241 |
ccttgctcaacttgtttacaatgataaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtccgaggattttgatattatgagagtaacc |
10184340 |
T |
|
| Q |
118 |
aggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
217 |
Q |
| |
|
| ||||||||||||||| |||||||| | |||||||||||| |||||||||||| ||||||||||||||||||||||| | | |||||||||||||||| |
|
|
| T |
10184341 |
aagtctctccttgaatctgtcacttccacaacttgggatagcaataatcttgatgtccttcgagttgagttaaagaaacattcaagggagaaaagatttt |
10184440 |
T |
|
| Q |
218 |
tgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataac |
317 |
Q |
| |
|
||||||| || |||||| ||||||||||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10184441 |
tgtttgtattggatgatctgtggaatgacagttatgatgattgggatgagctagtaagtcccttcattgatggaaaacctggaagcatggtgattataac |
10184540 |
T |
|
| Q |
318 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
417 |
Q |
| |
|
||| |||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10184541 |
aacgcgccaagaaaaagtagctgaggtggcacacacatttcctatacatgaactaaaacttctatcaaatgaagattgttggtcgttactctcaaagcat |
10184640 |
T |
|
| Q |
418 |
gcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
517 |
Q |
| |
|
|||||| || || ||||||||||| || || |||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10184641 |
gcattgagagttggtgagtttcaccgtactagaaactcaacctttgaagaaataggcaggaagattgcaagaaagtgtggaggattgccaatagctgcta |
10184740 |
T |
|
| Q |
518 |
aaacaataggtgggcttcta |
537 |
Q |
| |
|
|||||||||| || |||||| |
|
|
| T |
10184741 |
aaacaataggaggacttcta |
10184760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 18 - 538
Target Start/End: Original strand, 10088789 - 10089309
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10088789 |
ccttgcccaacttgtttacaatgataaagaagttcaacaccattttgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaaca |
10088888 |
T |
|
| Q |
118 |
aggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
217 |
Q |
| |
|
| ||||||||||||||| |||||||| | ||||| |||||| ||| |||||| | |||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10088889 |
aagtctctccttgaatctgtcacttcgacaacttcggatagcaatgatcttggtgtccttcaagttgagttaaagaaaaactcgagggagaaaagatttt |
10088988 |
T |
|
| Q |
218 |
tgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataac |
317 |
Q |
| |
|
|||||||||| |||||| |||||||||||| ||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10088989 |
tgtttgtgttggatgatctgtggaatgacaattataatgattggattgcactagtaagtcccttcattgatggaaaacctggaagcatggtgattataac |
10089088 |
T |
|
| Q |
318 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
417 |
Q |
| |
|
||| |||||| |||||| |||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10089089 |
aacgcgccaagaaaaagtagctgaggtggcacacacatttcctatacataaattagaacttctgtcaaatgaagattgttggactttactctcaaagcat |
10089188 |
T |
|
| Q |
418 |
gcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
517 |
Q |
| |
|
|||||||| |||||| |||||| |||||||||||||||||||||||||| ||| || ||||||||||||| |||||||||||||||||||| ||||| | |
|
|
| T |
10089189 |
gcattgggcaatgataagtttccccatagtacaaacacaacccttgaagcaattggccggaagattgcaaggaagtgtggaggattgccaatagctgcca |
10089288 |
T |
|
| Q |
518 |
aaacaataggtgggcttctac |
538 |
Q |
| |
|
||||| |||| || ||||||| |
|
|
| T |
10089289 |
aaacactaggaggacttctac |
10089309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 18 - 538
Target Start/End: Original strand, 10126927 - 10127447
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10126927 |
ccttgcccaacttgtttacaatgataaagaagttcaacaacattttgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaaca |
10127026 |
T |
|
| Q |
118 |
aggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
217 |
Q |
| |
|
| ||||||||||||||| |||||||| | |||||||||||| |||||||||||| |||||||||||| ||||||||||| || |||||| |||||||||| |
|
|
| T |
10127027 |
aagtctctccttgaatctgtcacttccacaacttgggatagcaataatcttgatgtccttcgagttgcgttaaagaaaatctcgagggaaaaaagatttt |
10127126 |
T |
|
| Q |
218 |
tgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataac |
317 |
Q |
| |
|
|||||||||| || ||| | |||||||||| || ||||||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
10127127 |
tgtttgtgttggacgatctatggaatgacaattgtaatgattgggatgagctagtaagtcccttcattaatggaaaacctggaagcatggtgattataac |
10127226 |
T |
|
| Q |
318 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
417 |
Q |
| |
|
||| ||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| | |||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
10127227 |
aacgcgccaacaaaaagttgctgaggtggcacgcacatttcctatacatgaactaaaagtactatcagatgaagattgttggtctttactatcaaagcat |
10127326 |
T |
|
| Q |
418 |
gcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
517 |
Q |
| |
|
|||||||||| ||||||| |||| |||| |||||| ||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10127327 |
gcattgggaagtgatgagattcagcataatacaaatacagcccttgaagaaacaggcaggaagattgcaagaaagtgtggaggattgccaatagctgcta |
10127426 |
T |
|
| Q |
518 |
aaacaataggtgggcttctac |
538 |
Q |
| |
|
||||| |||| || ||||||| |
|
|
| T |
10127427 |
aaacactaggaggacttctac |
10127447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 18 - 538
Target Start/End: Original strand, 10195672 - 10196192
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10195672 |
ccttgcccaacttgtttacaatgataaagaagttcaacaccattttgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaaca |
10195771 |
T |
|
| Q |
118 |
aggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
217 |
Q |
| |
|
| ||||||||||||||| |||||||| | ||||| |||||| ||| |||||| | |||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10195772 |
aagtctctccttgaatctgtcacttcgacaacttcggatagcaatgatcttggtgtccttcaagttgagttaaagaaaaactcgagggagaaaagatttt |
10195871 |
T |
|
| Q |
218 |
tgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataac |
317 |
Q |
| |
|
|||||||||| |||||| |||||||||||| ||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10195872 |
tgtttgtgttggatgatctgtggaatgacaattataatgattggattgcactagtaagtcccttcattgatggaaaacctggaagcatggtgattataac |
10195971 |
T |
|
| Q |
318 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
417 |
Q |
| |
|
||| |||||| |||||| |||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10195972 |
aacgcgccaagaaaaagtagctgaggtggcacacacatttcctatacataaattagaacttctgtcaaatgaagattgttggactttactctcaaagcat |
10196071 |
T |
|
| Q |
418 |
gcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
517 |
Q |
| |
|
|||||||| |||||| |||||| |||||||||||||||||||||||||| ||| || |||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
10196072 |
gcattgggcaatgataagtttccccatagtacaaacacaacccttgaagcaattggcctgaagattgcaaggaagtgtggaggattgccaatagctgcta |
10196171 |
T |
|
| Q |
518 |
aaacaataggtgggcttctac |
538 |
Q |
| |
|
||||| |||| || ||||||| |
|
|
| T |
10196172 |
aaacactaggaggacttctac |
10196192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 18 - 537
Target Start/End: Original strand, 10077268 - 10077787
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| |||||||| ||||||||| | |||||| | | |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10077268 |
ccttgcccaacttgtttacaatgattataaagttcgataccattttgatttgcaggcatgggcttgtgtgtctgaggattttgatattatgagagtaacc |
10077367 |
T |
|
| Q |
118 |
aggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
217 |
Q |
| |
|
| |||||||||||||||| ||||||| ||||||||||||| ||| |||||||| ||||||||||||||||||| ||||||| |||||| |||||||||| |
|
|
| T |
10077368 |
aagtctctccttgaatcgatcacttctagaacttgggataacaatgatcttgatgtccttcgagttgagttaaaaaaaaactcgagggataaaagatttt |
10077467 |
T |
|
| Q |
218 |
tgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataac |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |||||||| |||||| |||||||||||| ||||||||| | ||||||||||||||||||||| |
|
|
| T |
10077468 |
tgtttgtgttagatgatatgtggaatgacaattatagtgattgggatgaacttgtaagtcccttcattgatggaaagcatggaagcatggtgattataac |
10077567 |
T |
|
| Q |
318 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
417 |
Q |
| |
|
||||||||||| ||||||||| |||||||||| |||||||||||||||| |||| ||| | ||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
10077568 |
aacacgccaacaaaaagttgcagaggtggcacgcacatttcctatacatatattagaacctttatcaaatgaagattgttggtatttactttcaaagcat |
10077667 |
T |
|
| Q |
418 |
gcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
517 |
Q |
| |
|
|||||| || || |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10077668 |
gcattgagagttggtgagtttcaccatagtacaaactcaacccttgaagaaataggcaggaagattgcaagaaagtgtggaggattgccaatagctgcta |
10077767 |
T |
|
| Q |
518 |
aaacaataggtgggcttcta |
537 |
Q |
| |
|
|||||||||| || |||||| |
|
|
| T |
10077768 |
aaacaataggaggacttcta |
10077787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 18 - 536
Target Start/End: Original strand, 10580600 - 10581118
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||||||||||| ||||||| |||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10580600 |
ccttgcccaacttgtttacaatgataaagaagttcaacaacattttgacatgaaggcgtgggtttgtgtgtctgaggattttgatattatgagagtaaca |
10580699 |
T |
|
| Q |
118 |
aggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
217 |
Q |
| |
|
| ||||||||||||||| |||||||| | ||||| ||| || |||||||||||| ||||||| |||||||||||||||| || |||||||||||||||| |
|
|
| T |
10580700 |
aagtctctccttgaatctgtcacttccacaacttcggaaagcaataatcttgatgtccttcgtgttgagttaaagaaaatctcaagggagaaaagatttt |
10580799 |
T |
|
| Q |
218 |
tgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataac |
317 |
Q |
| |
|
|||||||||| |||||| |||||||||||| || ||||||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
10580800 |
tgtttgtgttggatgatctgtggaatgacaattgtaatgattgggatgagctagtaagtcccttcattaatggaaaacctggaagcatggtgattataac |
10580899 |
T |
|
| Q |
318 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
417 |
Q |
| |
|
||| ||||||| ||||||| | || ||||||||| ||| || ||||| | ||| ||| |||||||||||||||||||||||||||||||||||| || |
|
|
| T |
10580900 |
aacgcgccaacaaaaagttacaaagatggcacacatgtttgctgtacataatttagaacctctatcaaatgaagattgttggtctttactctcaaactat |
10580999 |
T |
|
| Q |
418 |
gcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
517 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| ||| ||||||||||||| || |||||||||||||||| |||||| ||||||||||| ||||||| |
|
|
| T |
10581000 |
gcattgggaagtgatgagtttcaccatagtacaaatacagcccttgaagaaattggcaggaagattgcaagaaggtgtgggggattgccaatagctgcta |
10581099 |
T |
|
| Q |
518 |
aaacaataggtgggcttct |
536 |
Q |
| |
|
||||| |||| || ||||| |
|
|
| T |
10581100 |
aaacactaggaggacttct |
10581118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 151 - 538
Target Start/End: Original strand, 10527490 - 10527877
Alignment:
| Q |
151 |
tgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttttgtttgtgttagatgatatgtggaatgacagtt |
250 |
Q |
| |
|
||||| || |||||||||||||||||||||||| |||||||||||| || |||||||| ||||||||||||||||| |||||| | |||||||||| || |
|
|
| T |
10527490 |
tgggaaagcaataatcttgatatccttcgagttcagttaaagaaaatctcaagggagaagagatttttgtttgtgttggatgatctatggaatgacaatt |
10527589 |
T |
|
| Q |
251 |
ataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataacaacacgccaacgaaaagttgctgaggtggcaca |
350 |
Q |
| |
|
| |||||||||| ||| ||||||||||| || |||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
10527590 |
acaatgattgggatgagctagtaagtccactcattgatggaaaacctggaagtatggtgattataacaacccaccaacgaaaagttgctgaggtggcacg |
10527689 |
T |
|
| Q |
351 |
cacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatgcattgggaaatgatgagtttcaccatagtaca |
450 |
Q |
| |
|
|||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
10527690 |
cacatttcctatacataaactaaaacttttatcaaatgaagattgttggtctttactctcaaagcatgcattgggaagtgatgagtttcacaatagtaca |
10527789 |
T |
|
| Q |
451 |
aacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgctaaaacaataggtgggcttctac |
538 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||||||||||||||||| || ||||||| |
|
|
| T |
10527790 |
aacacaacccttgaagaaataggcagaaagattgcaagaaagtatggaggattgccaatagctgctaaaacaataggaggacttctac |
10527877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 161 - 422
Target Start/End: Original strand, 10517627 - 10517888
Alignment:
| Q |
161 |
ataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttttgtttgtgttagatgatatgtggaatgacagttataatgattg |
260 |
Q |
| |
|
||||||||||||||||||||||||| || || || |||| |||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||| |
|
|
| T |
10517627 |
ataatcttgatatccttcgagttgaattgaaaaagaactcgagggagaaaagatttttgtttgtgttagatgatttgtggaatgatgattacaatgattg |
10517726 |
T |
|
| Q |
261 |
gggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataacaacacgccaacgaaaagttgctgaggtggcacacacatttcct |
360 |
Q |
| |
|
| ||||||||||||||| || |||||||||||| || || ||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
10517727 |
gcttgaactagtaagtccactcaatgatggaaaacccgggagttcggtgattataacaacgcgccaacaaaaagttgcagaggtggcacacacatttcct |
10517826 |
T |
|
| Q |
361 |
atacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatgcatt |
422 |
Q |
| |
|
|| || |||||| ||| |||||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10517827 |
attcaggaattagaacctctatctcatgaagattgttggtctttactctcaaaacatgcatt |
10517888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 161 - 422
Target Start/End: Complemental strand, 11781909 - 11781648
Alignment:
| Q |
161 |
ataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttttgtttgtgttagatgatatgtggaatgacagttataatgattg |
260 |
Q |
| |
|
||||||||||||||||||||||||| || || || |||| |||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||| |
|
|
| T |
11781909 |
ataatcttgatatccttcgagttgaattgaaaaagaactcgagggagaaaagatttttgtttgtgttagatgatttgtggaatgatgattacaatgattg |
11781810 |
T |
|
| Q |
261 |
gggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataacaacacgccaacgaaaagttgctgaggtggcacacacatttcct |
360 |
Q |
| |
|
| ||| ||||||||||| || |||||||||||||||||| ||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
11781809 |
gcttgagctagtaagtccactcaatgatggaaaacctggaagttcggtgattataacaactcgccaacaaaaagttgcagaggtggcacacacatttcct |
11781710 |
T |
|
| Q |
361 |
atacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatgcatt |
422 |
Q |
| |
|
|| |||| |||| ||| |||||| ||||||||||||||||||||||||| || |||||||| |
|
|
| T |
11781709 |
attcatgcattagaacctctatctcatgaagattgttggtctttactctcgaaacatgcatt |
11781648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 19 - 427
Target Start/End: Complemental strand, 11160086 - 11159678
Alignment:
| Q |
19 |
cttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacca |
118 |
Q |
| |
|
||||| |||||||| |||||| || || |||||||| | ||||||||||| || ||||||||||| || |||||||||||||||||| | ||||| | |
|
|
| T |
11160086 |
cttgcacaacttgtttacaataatgaaaaagttcaagatcattttgatttcaaagcatgggcttgtgtatctgaggattttgatattttatctgtaacta |
11159987 |
T |
|
| Q |
119 |
ggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagattttt |
218 |
Q |
| |
|
|||| |||||||| |||||||||||| ||||||| | |||||||||||| | ||||||||||| ||||||||| ||||| || ||||||||||| |
|
|
| T |
11159986 |
aaactcttcttgaatctgtcacttcaagagcttgggaaaccaataatcttgattttcttcgagttgaactaaagaaaactttgagcgacaaaagattttt |
11159887 |
T |
|
| Q |
219 |
gtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataaca |
318 |
Q |
| |
|
||||||||| ||||| | |||||||||| |||||||||||||| |||||| |||| ||| || | ||||||| |||||||| ||| || | ||| |
|
|
| T |
11159886 |
gtttgtgttggatgacctttggaatgacaattataatgattgggatgaacttgtaactcctttgattaatggaaacagtggaagcagggtcatcgtcaca |
11159787 |
T |
|
| Q |
319 |
acacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatg |
418 |
Q |
| |
|
|||||||||| ||||||||| ||||| ||||| ||||||||||| ||| ||||| || || |||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
11159786 |
acacgccaacaaaaagttgcagaggttgcacatacatttcctattcataaattagaagttttatctaatgaagatacatggtctttactctcaaagcatg |
11159687 |
T |
|
| Q |
419 |
cattgggaa |
427 |
Q |
| |
|
|||| |||| |
|
|
| T |
11159686 |
catttggaa |
11159678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 34 - 427
Target Start/End: Complemental strand, 11131080 - 11130687
Alignment:
| Q |
34 |
tacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaaccaggtctctccttgaat |
133 |
Q |
| |
|
||||||||| || |||||||| |||| |||||| | || ||||||||||| || || ||||||||||||||| | |||||||| | |||||||||||| |
|
|
| T |
11131080 |
tacaatgatgaaaaagttcaagaacactttgatctcaaagcatgggcttgtgtatcggaggattttgatattttaagagtaactaaaactctccttgaat |
11130981 |
T |
|
| Q |
134 |
cggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttttgtttgtgttagatga |
233 |
Q |
| |
|
| ||||||||||| ||||||| | |||||||||||| | ||||||||||| | ||||||| ||||| || |||||||||||||||||||| ||||| |
|
|
| T |
11130980 |
ctgtcacttcaagggcttgggaaaacaataatcttgattttcttcgagttgaactgaagaaaactttgagagacaaaagatttttgtttgtgttggatga |
11130881 |
T |
|
| Q |
234 |
tatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataacaacacgccaacgaaaa |
333 |
Q |
| |
|
| |||||||||| |||||||||||||| |||||| |||| ||| || | ||||||| |||||||| ||| || | ||||||||||||| |||| |
|
|
| T |
11130880 |
cctatggaatgacaattataatgattgggatgaacttgtaactcctttgattaatggaaacaatggaagcagggtcatcgtcacaacacgccaacaaaaa |
11130781 |
T |
|
| Q |
334 |
gttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatgcattgggaa |
427 |
Q |
| |
|
||||| ||||| ||||| ||||||||||| ||| ||||| || || |||| ||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
11130780 |
gttgcagaggttgcacatacatttcctattcataaattagaagttttatctaatgaagatacatggtctttactctcaaagcatgcatttggaa |
11130687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 34 - 427
Target Start/End: Complemental strand, 11148908 - 11148515
Alignment:
| Q |
34 |
tacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaaccaggtctctccttgaat |
133 |
Q |
| |
|
||||||||| || |||||||| |||| |||||| | || ||||||||||| || || ||||||||||||||| | |||||||| | |||||||||||| |
|
|
| T |
11148908 |
tacaatgatgaaaaagttcaagaacactttgatctcaaagcatgggcttgtgtatcggaggattttgatattttaagagtaactaaaactctccttgaat |
11148809 |
T |
|
| Q |
134 |
cggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttttgtttgtgttagatga |
233 |
Q |
| |
|
| ||||||||||| ||||||| | |||||||||||| | ||||||||||| | ||||||| ||||| | |||||||||||||||||||| ||||| |
|
|
| T |
11148808 |
ctgtcacttcaagggcttgggaaaacaataatcttgattttcttcgagttgaactgaagaaaactttgagagccaaaagatttttgtttgtgttggatga |
11148709 |
T |
|
| Q |
234 |
tatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataacaacacgccaacgaaaa |
333 |
Q |
| |
|
| |||||||||| |||||||||||||| |||||| |||| || || | ||||||| |||||||| ||| || | ||||||||||||| |||| |
|
|
| T |
11148708 |
cttatggaatgacaattataatgattgggatgaacttgtaacacctttgattaatggaaacagtggaagcagggtcatcgtcacaacacgccaacaaaaa |
11148609 |
T |
|
| Q |
334 |
gttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatgcattgggaa |
427 |
Q |
| |
|
||||| ||||| ||||| ||||||||||| ||| ||||| || || |||| ||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
11148608 |
gttgcagaggttgcacatacatttcctattcataaattagaagttttatctaatgaagatacatggtctttactctcaaagcatgcatttggaa |
11148515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 19 - 427
Target Start/End: Original strand, 8861286 - 8861694
Alignment:
| Q |
19 |
cttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacca |
118 |
Q |
| |
|
||||| |||||||| ||||||||| || |||||||| | || |||||| | || ||||||||||| || || ||||||||||||||| | ||||| | |
|
|
| T |
8861286 |
cttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatctcaaagcatgggcttgtgtatcagaggattttgatatttcaactgtaacta |
8861385 |
T |
|
| Q |
119 |
ggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagattttt |
218 |
Q |
| |
|
|||| |||||||| |||||||||||| ||||||| | |||||||||||| | ||||||||||| ||||||||| ||||| || ||||||||||| |
|
|
| T |
8861386 |
aaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatcttgattttcttcgagttgaactaaagaaaacattgagagacaaaagattttt |
8861485 |
T |
|
| Q |
219 |
gtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataaca |
318 |
Q |
| |
|
||||||||| ||||| | |||||||||| ||||||||| |||| |||||| |||| ||| || | ||||||| |||||||| ||| || | ||| |
|
|
| T |
8861486 |
gtttgtgttggatgacctatggaatgacaattataatgagtgggatgaacttgtaactcctttgattaatggaaacagtggaagcagggtcatcgtcaca |
8861585 |
T |
|
| Q |
319 |
acacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatg |
418 |
Q |
| |
|
|||||||||| ||||||||| ||||| ||||| ||||||||||| ||| ||||| || || |||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
8861586 |
acacgccaacaaaaagttgcagaggttgcacatacatttcctattcataaattagaagttttatctaatgaagatacatggtctttactctcaaagcatg |
8861685 |
T |
|
| Q |
419 |
cattgggaa |
427 |
Q |
| |
|
|||| |||| |
|
|
| T |
8861686 |
catttggaa |
8861694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 19 - 427
Target Start/End: Original strand, 10889306 - 10889714
Alignment:
| Q |
19 |
cttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacca |
118 |
Q |
| |
|
||||| |||||||| ||||||||| || |||||||| | || |||||| | || ||||||||||| || |||||||||||||||||| | | ||||| | |
|
|
| T |
10889306 |
cttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatctcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaacta |
10889405 |
T |
|
| Q |
119 |
ggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagattttt |
218 |
Q |
| |
|
|||| |||||||| || ||||||||| ||||||| | |||||||| ||| | ||||||||||| ||||||||| ||||| || ||||||||||| |
|
|
| T |
10889406 |
aaactcttcttgaatctgtgacttcaagagcttgggaaaacaataatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagattttt |
10889505 |
T |
|
| Q |
219 |
gtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataaca |
318 |
Q |
| |
|
||||||||| ||||| | |||||||||| |||||||||||||| |||||| |||| ||| || | ||||||| |||||||| ||| | || ||| |
|
|
| T |
10889506 |
gtttgtgttggatgacctatggaatgacaattataatgattgggatgaacttgtaactcctttgattaatggaaacagtggaagcagggtcgtcatcaca |
10889605 |
T |
|
| Q |
319 |
acacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatg |
418 |
Q |
| |
|
|||||||| | ||||||||| ||||| |||||||| | |||||| || ||||| || || |||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
10889606 |
acacgccagcaaaaagttgcagaggttgcacacacgtatcctattcacaaattagaagttttatctaatgaagatacatggtctttactctcaaagcatg |
10889705 |
T |
|
| Q |
419 |
cattgggaa |
427 |
Q |
| |
|
|||| |||| |
|
|
| T |
10889706 |
catttggaa |
10889714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 427
Target Start/End: Original strand, 13160980 - 13161388
Alignment:
| Q |
19 |
cttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacca |
118 |
Q |
| |
|
||||| |||||| | || |||||||||||||||||| | ||||||||| |||| | |||| ||| || || |||||||| |||||| |||||||||| | |
|
|
| T |
13160980 |
cttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattctgagagtaacta |
13161079 |
T |
|
| Q |
119 |
ggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagattttt |
218 |
Q |
| |
|
| | | |||||| ||||| |||||| || | || || |||||||||||| |||||||||||||| || |||||||||||||| ||||||||||| |
|
|
| T |
13161080 |
aaaccattcatgaatctgtcacctcaagagctggcgaaagcaataatcttgattctcttcgagttgagttgaataaaaacttgagggataaaagattttt |
13161179 |
T |
|
| Q |
219 |
gtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataaca |
318 |
Q |
| |
|
||| ||| | || ||| |||||||||| |||||||||||||||| ||| |||||| ||| || | | || ||| | ||||| | |||||| || ||| |
|
|
| T |
13161180 |
gttagtgctggacgatctgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacgggaagtagggtgatcatcaca |
13161279 |
T |
|
| Q |
319 |
acacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatg |
418 |
Q |
| |
|
|||||||||| ||||||||| ||||| |||||||| |||||||| || || || | | ||||||| |||| || |||||||| ||||| |||||||||| |
|
|
| T |
13161280 |
acacgccaacaaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatg |
13161379 |
T |
|
| Q |
419 |
cattgggaa |
427 |
Q |
| |
|
|||| |||| |
|
|
| T |
13161380 |
catttggaa |
13161388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 427
Target Start/End: Original strand, 13171031 - 13171439
Alignment:
| Q |
19 |
cttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacca |
118 |
Q |
| |
|
||||| |||||| | || |||||||||||||||||| | ||||||||| |||| | |||| ||| || || |||||||| |||||| |||||||||| | |
|
|
| T |
13171031 |
cttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattctgagagtaacta |
13171130 |
T |
|
| Q |
119 |
ggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagattttt |
218 |
Q |
| |
|
| | | |||||| |||||||||||| | | || | |||||||||||| | ||||||||||| || || ||||||||||||| ||||||||||| |
|
|
| T |
13171131 |
aaaccattcatgaatctgtcacttcaagaggtggtgaaaacaataatcttgattttcttcgagttgaattgaatcaaaacttgagggataaaagattttt |
13171230 |
T |
|
| Q |
219 |
gtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataaca |
318 |
Q |
| |
|
||| ||| | || ||| |||||||||| |||||||||||||||| ||| |||||| ||| || | | || ||| | ||||| |||||||| || ||| |
|
|
| T |
13171231 |
gttagtgctggacgatctgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacgggaagtatggtgatcatcaca |
13171330 |
T |
|
| Q |
319 |
acacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatg |
418 |
Q |
| |
|
|||||||||| ||||||||| ||||| |||||||| |||||||| || || || | | ||||||| |||| || |||||||| ||||| |||||||||| |
|
|
| T |
13171331 |
acacgccaacaaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatg |
13171430 |
T |
|
| Q |
419 |
cattgggaa |
427 |
Q |
| |
|
|||| |||| |
|
|
| T |
13171431 |
cattcggaa |
13171439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 427
Target Start/End: Original strand, 13332904 - 13333312
Alignment:
| Q |
19 |
cttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacca |
118 |
Q |
| |
|
||||| |||||| | || |||||||||||||||||| | ||||||||| |||| | |||| ||| || || |||||||| |||||| |||||||||| | |
|
|
| T |
13332904 |
cttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattctgagagtaacta |
13333003 |
T |
|
| Q |
119 |
ggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagattttt |
218 |
Q |
| |
|
| | | |||||| |||||||||||| | | || | |||||||||||| | ||||||||||| || || |||||||||||||| ||||||||||| |
|
|
| T |
13333004 |
aaaccattcatgaatctgtcacttcaagaggtggtgaaaacaataatcttgattttcttcgagttgaattgaataaaaacttgagggataaaagattttt |
13333103 |
T |
|
| Q |
219 |
gtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataaca |
318 |
Q |
| |
|
||| ||||| ||||| |||||||||||| |||||||||||||| ||| |||||| ||| | | | || ||| ||||| | |||||| || ||| |
|
|
| T |
13333104 |
gttagtgttggatgacctgtggaatgacaattataatgattgggatgagttagtaactccactgattaacggcaaaaaaggaagtagggtgatcatcaca |
13333203 |
T |
|
| Q |
319 |
acacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatg |
418 |
Q |
| |
|
|||||||||| ||||||||| ||||| |||||||| |||||||| || || || | | ||||||| |||| || |||||||| ||||| |||||||||| |
|
|
| T |
13333204 |
acacgccaacaaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatg |
13333303 |
T |
|
| Q |
419 |
cattgggaa |
427 |
Q |
| |
|
|||| |||| |
|
|
| T |
13333304 |
cattcggaa |
13333312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 19 - 427
Target Start/End: Original strand, 13344089 - 13344497
Alignment:
| Q |
19 |
cttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacca |
118 |
Q |
| |
|
||||| |||||| | || |||||||||||||||||| | ||||||||| |||| | |||| ||| || || |||||||| |||||| ||||||| || | |
|
|
| T |
13344089 |
cttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattctgagagtcacta |
13344188 |
T |
|
| Q |
119 |
ggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagattttt |
218 |
Q |
| |
|
| | | |||||| |||||||||||| | | || | |||||||||||| | ||||||||||| || || ||||||||||||| ||||||||||| |
|
|
| T |
13344189 |
aaaccattcatgaatctgtcacttcaagaggtggtgaaaacaataatcttgattttcttcgagttgaattgaatcaaaacttgagggataaaagattttt |
13344288 |
T |
|
| Q |
219 |
gtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataaca |
318 |
Q |
| |
|
||| ||| | || ||| |||||||||| |||||||||||||||| ||| |||||| ||| || | | || ||| | ||||| |||||||| || ||| |
|
|
| T |
13344289 |
gttagtgctggacgatctgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacgggaagtatggtgatcatcaca |
13344388 |
T |
|
| Q |
319 |
acacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatg |
418 |
Q |
| |
|
|||||||||| ||||||||| ||||| |||||||| |||||||| || || || | | ||||||| |||| || |||||||| ||||| |||||||||| |
|
|
| T |
13344389 |
acacgccaacaaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatg |
13344488 |
T |
|
| Q |
419 |
cattgggaa |
427 |
Q |
| |
|
|||| |||| |
|
|
| T |
13344489 |
cattcggaa |
13344497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 427
Target Start/End: Original strand, 13289665 - 13290073
Alignment:
| Q |
19 |
cttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacca |
118 |
Q |
| |
|
||||| |||||| | || |||||||||||||||||| | ||||||||| |||| | |||| ||| || || |||||||| |||||| |||||||||| | |
|
|
| T |
13289665 |
cttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattttgagagtaacta |
13289764 |
T |
|
| Q |
119 |
ggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagattttt |
218 |
Q |
| |
|
| | | |||||| |||||||||||| | | || || |||||||||||| ||||||||||| | || ||||||||||||| ||||||||||| |
|
|
| T |
13289765 |
aaaccattcatgaatctgtcacttcaagaggtggtgaaagcaataatcttgattctcttcgagttgaactgaatcaaaacttgagggataaaagattttt |
13289864 |
T |
|
| Q |
219 |
gtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataaca |
318 |
Q |
| |
|
||| ||| | || ||| |||||||||| |||||||||||||||| ||| |||||| ||| || | | || ||| | ||||| | |||||| || ||| |
|
|
| T |
13289865 |
gttggtgctggacgatctgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacaggaagtagggtgatcatcaca |
13289964 |
T |
|
| Q |
319 |
acacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatg |
418 |
Q |
| |
|
|||||||||| ||||||||| ||||| |||||||| |||||||| || || || | | ||||||| |||| || |||||||| ||||| |||||||||| |
|
|
| T |
13289965 |
acacgccaacaaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatg |
13290064 |
T |
|
| Q |
419 |
cattgggaa |
427 |
Q |
| |
|
|||| |||| |
|
|
| T |
13290065 |
catttggaa |
13290073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 160 - 422
Target Start/End: Original strand, 10500715 - 10500977
Alignment:
| Q |
160 |
aataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttttgtttgtgttagatgatatgtggaatgacagttataatgatt |
259 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||| | |||| ||| | |||||||||||||||||| || || |||||||||||||||||| ||| | |
|
|
| T |
10500715 |
aataatcttgatatccttcaagttgagttaatgaaacatttgatggatagaagatttttgtttgtgttggacgacatgtggaatgacagttatgttgact |
10500814 |
T |
|
| Q |
260 |
ggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataacaacacgccaacgaaaagttgctgaggtggcacacacatttcc |
359 |
Q |
| |
|
||| ||| || ||| |||||| | | || || | ||| ||| ||||| |||||||||||| ||| ||||||||| ||||| ||| ||||||||| |
|
|
| T |
10500815 |
gggatgagttaataactcccttgactaacagagaaacaggaggcaaagtgataataacaacacgcgaacaaaaagttgcagaggtcgcatgcacatttcc |
10500914 |
T |
|
| Q |
360 |
tatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatgcatt |
422 |
Q |
| |
|
||| ||| ||||| ||| |||||| |||| ||||||||| |||||||||| ||||||||||| |
|
|
| T |
10500915 |
tattcataaattagaacctctatctgatgatgattgttggactttactctcgaagcatgcatt |
10500977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 464 - 538
Target Start/End: Original strand, 10672127 - 10672201
Alignment:
| Q |
464 |
aagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgctaaaacaataggtgggcttctac |
538 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| |
|
|
| T |
10672127 |
aagaaataggcaggaagattgcaagaaagtgtggaggattgccaatagctgctaaaacaataggaggacttctac |
10672201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 338
Target Start/End: Complemental strand, 11153739 - 11153524
Alignment:
| Q |
122 |
ctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttttgtt |
221 |
Q |
| |
|
||||||||||||| |||||||||||| | | || ||||| ||||||||| | |||||||||||||||||||||| |||| || |||||||||| | |
|
|
| T |
11153739 |
ctctccttgaatctgtcacttcaagagcatatgaaagtaacaatcttgattttcttcgagttgagttaaagaaaattctgagaga-caaagattttttgt |
11153641 |
T |
|
| Q |
222 |
tgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataacaaca |
321 |
Q |
| |
|
|||||| ||||| | |||||||| | |||||| |||| | |||||| |||| ||| || | |||||||| |||||||| ||||| || |||||| |
|
|
| T |
11153640 |
tgtgttggatgacttatggaatgataattataacgattcagatgaacttgtaactccattgatttatggaaaaagtggaagcagagtgatcatcacaaca |
11153541 |
T |
|
| Q |
322 |
cgccaacgaaaagttgc |
338 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
11153540 |
cgccaagaaaaagttgc |
11153524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 10517474 - 10517579
Alignment:
| Q |
29 |
ttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaaccaggtctctcct |
128 |
Q |
| |
|
|||| ||||||||| | ||||| |||||||||||||||| || || |||| ||| || ||||||||||||||| |||| |||| ||||| |||| |||| |
|
|
| T |
10517474 |
ttgtttacaatgatgcaaaagttgaacaacattttgatttcaaagcctgggtttgtgtatctgaggattttgatgttattagagcaaccaagtctatcct |
10517573 |
T |
|
| Q |
129 |
tgaatc |
134 |
Q |
| |
|
|||||| |
|
|
| T |
10517574 |
tgaatc |
10517579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 10527336 - 10527452
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| |||||||| ||||||||| || | ||| |||| ||||||||| | ||||| |||| || || || |||||||| ||| || ||||||||||| |
|
|
| T |
10527336 |
ccttgcacaacttgtttacaatgatgaaaaggttgaacaccattttgatctcaaggcctgggtttatgtatcagaggatttcgatgttgtgagagtaacc |
10527435 |
T |
|
| Q |
118 |
aggtctctccttgaatc |
134 |
Q |
| |
|
| ||||||| ||||||| |
|
|
| T |
10527436 |
aagtctctcattgaatc |
10527452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 11782073 - 11781957
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| || ||||| ||||||||| ||||| |||||||||||||||| || | |||| ||| || || |||||||| ||| || | ||| ||||| |
|
|
| T |
11782073 |
ccttgcacagcttgtttacaatgatgtgaaagttgaacaacattttgatttcaaagtctgggtttgtgtatcggaggatttcgatgttgttagaataacc |
11781974 |
T |
|
| Q |
118 |
aggtctctccttgaatc |
134 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
11781973 |
aagtctctccttgaatc |
11781957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 18 - 527
Target Start/End: Original strand, 26906896 - 26907405
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| |||||| | |||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
26906896 |
ccttgcccaacttctttacaatgataaagaagttcaacggcattttgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacc |
26906995 |
T |
|
| Q |
118 |
aggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttt |
217 |
Q |
| |
|
| ||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
26906996 |
aaatctctccttgaatcggtcacttccagaacttgggataccaataatcttgatgtccttcgagttgagttaaggaaaaactcaagggagaaaagatttt |
26907095 |
T |
|
| Q |
218 |
tgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataac |
317 |
Q |
| |
|
|||||||||| ||||| ||||||| |||| ||||| |||||||| ||||| |||||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
26907096 |
tgtttgtgttggatgacctgtggaacgacaattatagtgattgggaagaacttgtaagtcccttcattcatggaaaacctggaagcatggtgattataac |
26907195 |
T |
|
| Q |
318 |
aacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcat |
417 |
Q |
| |
|
||| ||||||| ||||||||| ||||||||||| ||||||||||||||| ||||| ||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
26907196 |
aacgcgccaacaaaaagttgcagaggtggcacatacatttcctatacataaattagaacctctatcaactgaagattgttggtctttactctcaaagcat |
26907295 |
T |
|
| Q |
418 |
gcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
517 |
Q |
| |
|
|||||||||| | | |||||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26907296 |
gcattgggaagtaaagagtttcaccatagtattaacacaaccctcgaagaaattggcaggaagattgcaagaaagtgtggaggattgccaattgctgcta |
26907395 |
T |
|
| Q |
518 |
aaacaatagg |
527 |
Q |
| |
|
||||| |||| |
|
|
| T |
26907396 |
aaacactagg |
26907405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 382 - 536
Target Start/End: Complemental strand, 58126 - 57972
Alignment:
| Q |
382 |
tcaaatgaagattgttggtctttactctcaaagcatgcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaaga |
481 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||| ||||||||||||| || ||||||| |
|
|
| T |
58126 |
tcaaatgaagattgttggtctttactctcaaactatgcattgggaagtgatgagtttcaccatagtacaaatacagcccttgaagaaattggcaggaaga |
58027 |
T |
|
| Q |
482 |
ttgcaagaaagtgtggaggattgccaattgctgctaaaacaataggtgggcttct |
536 |
Q |
| |
|
||||||||| |||||| ||||||||||| |||||||||||| |||| || ||||| |
|
|
| T |
58026 |
ttgcaagaaggtgtgggggattgccaatagctgctaaaacactaggaggacttct |
57972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 22 - 427
Target Start/End: Complemental strand, 31679799 - 31679394
Alignment:
| Q |
22 |
gctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaaccaggt |
121 |
Q |
| |
|
||||||||| | |||||||||||||| |||||| ||| ||||||| | || || |||| ||| |||| || || |||||| || |||| |||||||| |
|
|
| T |
31679799 |
gctcaacttctttacaatgataaagatgttcaagaacgttttgatgtaaaagcttgggtttgtctgtccgaagagtttgatgttttgagggtaaccagaa |
31679700 |
T |
|
| Q |
122 |
ctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttttgtt |
221 |
Q |
| |
|
|| | |||||||| ||||||||| | ||| ||| ||||||||||| | |||||||| | |||||| ||||||||| || |||||||||||||| |
|
|
| T |
31679699 |
ctttacttgaatctatcacttcaaatgttcaggaaagtgataatcttgattttcttcgagtcaaattaaagcaaaacttgaagggaaaaagatttttgtt |
31679600 |
T |
|
| Q |
222 |
tgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataacaaca |
321 |
Q |
| |
|
|||||| ||||| ||||||||||| || |||||||||||| | | ||||| | ||||||| ||||||| || ||||||| | ||||||||| |||||| |
|
|
| T |
31679599 |
tgtgttggatgacatgtggaatgatagctataatgattggcatcatctagtcactcccttcattgatggagaatctggaagtagggtgattatcacaaca |
31679500 |
T |
|
| Q |
322 |
cgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatgcat |
421 |
Q |
| |
|
|| ||| ||||||||| ||| | | || || |||||||| || ||||| ||| ||||||| |||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
31679499 |
cgtcaataaaaagttgccgagttcacccatacctttcctatctataaattagaacctctatcagatgatgattgctggtctttactctcaaagcatgcat |
31679400 |
T |
|
| Q |
422 |
tgggaa |
427 |
Q |
| |
|
| |||| |
|
|
| T |
31679399 |
ttggaa |
31679394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 97; Significance: 2e-47; HSPs: 3)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 427
Target Start/End: Complemental strand, 135957 - 135549
Alignment:
| Q |
19 |
cttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacca |
118 |
Q |
| |
|
||||| |||||| | || |||||||||||||||||| | ||||||||| |||| | |||| ||| || || |||||||| |||||| |||||||||| | |
|
|
| T |
135957 |
cttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattctgagagtaacta |
135858 |
T |
|
| Q |
119 |
ggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagattttt |
218 |
Q |
| |
|
| | | |||||| |||||||||||| | | || | |||||||||||| | ||||||||||| || || ||||||||||||| ||||||||||| |
|
|
| T |
135857 |
aaaccattcatgaatctgtcacttcaagaggtggtgaaaacaataatcttgattttcttcgagttgaattgaatcaaaacttgagggataaaagattttt |
135758 |
T |
|
| Q |
219 |
gtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataaca |
318 |
Q |
| |
|
||| ||| | || ||| |||||||||| |||||||||||||||| ||| |||||| ||| || | | || ||| | ||||| |||||||| || ||| |
|
|
| T |
135757 |
gttagtgctggacgatctgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacgggaagtatggtgatcatcaca |
135658 |
T |
|
| Q |
319 |
acacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatg |
418 |
Q |
| |
|
|||||||||| ||||||||| ||||| |||||||| |||||||| || || || | | ||||||| |||| || |||||||| ||||| |||||||||| |
|
|
| T |
135657 |
acacgccaacaaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatg |
135558 |
T |
|
| Q |
419 |
cattgggaa |
427 |
Q |
| |
|
|||| |||| |
|
|
| T |
135557 |
cattcggaa |
135549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 427
Target Start/End: Complemental strand, 146008 - 145600
Alignment:
| Q |
19 |
cttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacca |
118 |
Q |
| |
|
||||| |||||| | || |||||||||||||||||| | ||||||||| |||| | |||| ||| || || |||||||| |||||| |||||||||| | |
|
|
| T |
146008 |
cttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattctgagagtaacta |
145909 |
T |
|
| Q |
119 |
ggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagattttt |
218 |
Q |
| |
|
| | | |||||| |||||||||||| | | || | |||||||||||| | ||||||||||| || || ||||||||||||| ||||||||||| |
|
|
| T |
145908 |
aaaccattcatgaatctgtcacttcaagaggtggtgaaaacaataatcttgattttcttcgagttgaattgaatcaaaacttgagggataaaagattttt |
145809 |
T |
|
| Q |
219 |
gtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataaca |
318 |
Q |
| |
|
||| ||| | || ||| |||||||||| |||||||||||||||| ||| |||||| ||| || | | || ||| | ||||| |||||||| || ||| |
|
|
| T |
145808 |
gttagtgctggacgatctgtggaatgatagttataatgattgggatgagttagtaactccattgattaacggcaaaacgggaagtatggtgatcatcaca |
145709 |
T |
|
| Q |
319 |
acacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatg |
418 |
Q |
| |
|
|||||||||| ||||||||| ||||| |||||||| |||||||| || || || | | ||||||| |||| || |||||||| ||||| |||||||||| |
|
|
| T |
145708 |
acacgccaacaaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgttactttcaaagcatg |
145609 |
T |
|
| Q |
419 |
cattgggaa |
427 |
Q |
| |
|
|||| |||| |
|
|
| T |
145608 |
cattcggaa |
145600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 306 - 427
Target Start/End: Complemental strand, 154026 - 153905
Alignment:
| Q |
306 |
ggtgattataacaacacgccaacgaaaagttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtcttta |
405 |
Q |
| |
|
|||||| || ||||||||||||| ||||||||| ||||| |||||||| |||||||| || || || | | ||||||| |||| || |||||||| ||| |
|
|
| T |
154026 |
ggtgatcatcacaacacgccaacaaaaagttgcggaggttgcacacacgtttcctattcacaaagtagatcctctatcagatgatgactgttggtcgtta |
153927 |
T |
|
| Q |
406 |
ctctcaaagcatgcattgggaa |
427 |
Q |
| |
|
|| |||||||||||||| |||| |
|
|
| T |
153926 |
ctttcaaagcatgcattcggaa |
153905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 86; Significance: 7e-41; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 161 - 422
Target Start/End: Complemental strand, 17852850 - 17852589
Alignment:
| Q |
161 |
ataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttttgtttgtgttagatgatatgtggaatgacagttataatgattg |
260 |
Q |
| |
|
|||||||||||||||| |||||||| |||| |||| | |||| ||| | |||||||||||||||||| || || | |||||||||| ||| |||||| |
|
|
| T |
17852850 |
ataatcttgatatcctccgagttgaattaatgaaacaattgatggatagaagatttttgtttgtgttggacgacttatggaatgacaattacgttgattg |
17852751 |
T |
|
| Q |
261 |
gggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataacaacacgccaacgaaaagttgctgaggtggcacacacatttcct |
360 |
Q |
| |
|
| |||| ||||||| |||||| | | |||||| ||||||||| ||| || ||||||||||||| | ||||||||| ||||| |||| ||||||||| |
|
|
| T |
17852750 |
gagtgagctagtaactcccttgtttaagggaaaagctggaagcaaggtcatcataacaacacgcctaaaaaaagttgcggaggttgcacgcacatttcca |
17852651 |
T |
|
| Q |
361 |
atacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatgcatt |
422 |
Q |
| |
|
|| ||| ||||| ||| | |||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
17852650 |
attcataaattagaacctatatccgatgaagattgttggtctttgctctcaaagcatgcatt |
17852589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 7129044 - 7128961
Alignment:
| Q |
19 |
cttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgat |
102 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| |||||||||||||| ||||| ||||| ||| || ||||| ||||||||| |
|
|
| T |
7129044 |
cttgctcaacttgtatacaatgacaaagaagtgcaacaacattttgagttgaaaaaatgggtttgtgtttctgatgattttgat |
7128961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 17853014 - 17852898
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| || ||||| ||||||||| || | ||| |||| ||||||||| | || || |||| ||| || || || ||||||||| || ||||||||||| |
|
|
| T |
17853014 |
ccttgcacagcttgtttacaatgatgaaaaggttgaacatcattttgatctcaaagcctgggtttgtgtatcagaagattttgatgttgtgagagtaacc |
17852915 |
T |
|
| Q |
118 |
aggtctctccttgaatc |
134 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
17852914 |
aagtctctccttgaatc |
17852898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 7482094 - 7482138
Alignment:
| Q |
19 |
cttgctcaacttgtctacaatgataaagaagttcaacaacatttt |
63 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| |||||||||||| |
|
|
| T |
7482094 |
cttgctcaacttgtatacaatgacaaagaagtgcaacaacatttt |
7482138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 73; Significance: 4e-33; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 151 - 515
Target Start/End: Original strand, 11485170 - 11485534
Alignment:
| Q |
151 |
tgggatagtaataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttttgtttgtgttagatgatatgtggaatgacagtt |
250 |
Q |
| |
|
||||| || ||||||||||||||||||| |||||| |||| ||| | |||| ||| | |||| ||||||||||||| || || || ||||| |||| || |
|
|
| T |
11485170 |
tgggaaagcaataatcttgatatccttcaagttgaattaatgaagcatttgaaggatagaagaattttgtttgtgttggacgacatatggaacgacaatt |
11485269 |
T |
|
| Q |
251 |
ataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataacaacacgccaacgaaaagttgctgaggtggcaca |
350 |
Q |
| |
|
|| |||||||| | || ||| |||||| | ||||| || ||| ||||| |||||| |||||||||||| || |||||||| ||||| ||| |
|
|
| T |
11485270 |
atcttgattgggatcggttaataactcccttgattaatggagaaactgtaagcaaggtgatcataacaacacgcgaagagaaagttgcagaggtcgcatg |
11485369 |
T |
|
| Q |
351 |
cacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatgcattgggaaatgatgagtttcaccatagtaca |
450 |
Q |
| |
|
| |||||||||| ||| ||||| ||| |||||| ||||||||||||||||||||||||| ||||||||||| || ||| || |||| | ||| | |
|
|
| T |
11485370 |
cgcatttcctattcataaattagaacctctatctgatgaagattgttggtctttactctcgaagcatgcatttggcggtgaagaatttcttcggggtaaa |
11485469 |
T |
|
| Q |
451 |
aacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgccaattgctgc |
515 |
Q |
| |
|
|| ||| ||| ||||| || || ||||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
11485470 |
tacccaaacctagaagagattggcaggaagattgctagaaagtgtggtggattgccaattgctgc |
11485534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 161 - 422
Target Start/End: Complemental strand, 44957615 - 44957354
Alignment:
| Q |
161 |
ataatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttttgtttgtgttagatgatatgtggaatgacagttataatgattg |
260 |
Q |
| |
|
|||||||||||||||||| |||||| |||| |||| | |||| ||| | |||||||||||||||||| || || || |||||||||| ||||| ||||| |
|
|
| T |
44957615 |
ataatcttgatatccttcaagttgaattaatgaaacatttgatggatagaagatttttgtttgtgttggacgacatatggaatgacaattatatcgattg |
44957516 |
T |
|
| Q |
261 |
gggtgaactagtaagtcccttcggtgatggaaaacctggaagcatggtgattataacaacacgccaacgaaaagttgctgaggtggcacacacatttcct |
360 |
Q |
| |
|
| ||| || ||| ||||| | || | ||| ||||| ||| || ||||||||||| ||| ||| ||||| ||||| |||||||||||||| |
|
|
| T |
44957515 |
gtctgagttaataacacccttgaccaaccgaggaactgaaagcaaggtcatcataacaacacgtgaacaaaacgttgcagaggttgcacacacatttccg |
44957416 |
T |
|
| Q |
361 |
atacatgaattaaaacttctatcaaatgaagattgttggtctttactctcaaagcatgcatt |
422 |
Q |
| |
|
|| ||| ||||| ||| |||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44957415 |
attcataaattagaacctctatctgatgaagattgttggtctttactctcaaagcatgcatt |
44957354 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 11485016 - 11485132
Alignment:
| Q |
18 |
ccttgctcaacttgtctacaatgataaagaagttcaacaacattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaacc |
117 |
Q |
| |
|
|||||| |||||||| ||||| ||| || ||||| |||| ||||||||| | || ||||||| ||| || || |||||||| ||| | |||| ||||| |
|
|
| T |
11485016 |
ccttgcacaacttgtttacaacgatgaaaaagttgaacagcattttgatctcaaagcatgggtttgtgtatcggaggatttcgatgtcgtgaggataacc |
11485115 |
T |
|
| Q |
118 |
aggtctctccttgaatc |
134 |
Q |
| |
|
| ||| ||||||||||| |
|
|
| T |
11485116 |
aagtccctccttgaatc |
11485132 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 76 - 245
Target Start/End: Original strand, 29836700 - 29836869
Alignment:
| Q |
76 |
tgggcttgcgtgtctgaggattttgatattatgagagtaaccaggtctctccttgaatcggtcacttcaagaacttgggatagtaataatcttgatatcc |
175 |
Q |
| |
|
|||| ||| |||||||| ||||||||||| |||||||||||| |||||||||||| |||||||||||| ||| ||| ||||| |||||| | | |
|
|
| T |
29836700 |
tgggtttgtgtgtctgaagattttgatatgttgagagtaaccaaatctctccttgaagttgtcacttcaagagaatggaataccaataaccttgatcttc |
29836799 |
T |
|
| Q |
176 |
ttcgagttgagttaaagaaaaacttgagggagaaaagatttttgtttgtgttagatgatatgtggaatga |
245 |
Q |
| |
|
|||||||||| || |||||||| |||| | |||||||||||| |||| || |||||| | |||||||| |
|
|
| T |
29836800 |
ttcgagttgaattgaagaaaaatttgaacaacaaaagatttttgattgtattggatgatgtttggaatga |
29836869 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 534
Target Start/End: Original strand, 826100 - 826417
Alignment:
| Q |
208 |
aaaagatttttgtttgtgttagatgatatgtggaatgacagttataatgattggggtgaactagtaagtcccttcggtgatggaaaacctggaagcatgg |
307 |
Q |
| |
|
|||||||||||||||||||| |||| | |||||||| ||||||||||| ||| ||| ||| | ||| || | | ||||||| |||||| | || |
|
|
| T |
826100 |
aaaagatttttgtttgtgttggatggcttatggaatgatagttataatgactggcatgatctaattgctccattggttaatggaaattgtggaagtaggg |
826199 |
T |
|
| Q |
308 |
tgattataacaacacgccaacgaaa-agttgctgaggtggcacacacatttcctatacatgaattaaaacttctatcaaatgaagattgttggtctttac |
406 |
Q |
| |
|
|||| || ||||||||| | ||||| |||||| ||||| ||||| || | |||||| ||| |||| ||| |||||| | ||| ||||||||||||||| |
|
|
| T |
826200 |
tgatcatcacaacacgcta-cgaaagagttgcagaggttgcacatacgtatcctattcataaattggaacctctatcggacgaacattgttggtctttac |
826298 |
T |
|
| Q |
407 |
tctcaaagcatgcattgggaaatgatgagtttcaccatagtacaaacacaacccttgaagaaataggaaggaagattgcaagaaagtgtggaggattgcc |
506 |
Q |
| |
|
|||| ||| ||||||| |||| || ||| ||| || | || ||||| | |||| ||| || | ||||||||||| ||||||||| |||||||| |
|
|
| T |
826299 |
tctccaagtatgcatttggaagtggtga-------cat--taaatacccaaccttagaagcaattgggaagaagattgcaaaaaagtgtggtggattgcc |
826389 |
T |
|
| Q |
507 |
aattgctgctaaaacaataggtgggctt |
534 |
Q |
| |
|
||| ||||| ||||| |||| |||||| |
|
|
| T |
826390 |
aatagctgccaaaacgctaggagggctt |
826417 |
T |
|
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