View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20617_low_8 (Length: 392)
Name: NF20617_low_8
Description: NF20617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20617_low_8 |
 | |
|
| [»] scaffold0083 (2 HSPs) |
| | |
|
| [»] chr2 (2 HSPs) |
| |
|
| [»] scaffold0002 (4 HSPs) |
| | |
|
| [»] scaffold0267 (1 HSPs) |
| | |
|
| [»] scaffold0603 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 372; Significance: 0; HSPs: 37)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 5 - 388
Target Start/End: Complemental strand, 11770117 - 11769734
Alignment:
| Q |
5 |
atgaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcag |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11770117 |
atgaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcag |
11770018 |
T |
|
| Q |
105 |
caaaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaag |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11770017 |
caaaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaag |
11769918 |
T |
|
| Q |
205 |
tgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatca |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11769917 |
tgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaagtgagatggaagatattgataacttaaatgcaaagcaggaagaatattatca |
11769818 |
T |
|
| Q |
305 |
tttgataagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaagcccacctattgtt |
388 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
11769817 |
tttgataagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaacgtagaagccctcctattgtt |
11769734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 5 - 378
Target Start/End: Complemental strand, 10032886 - 10032513
Alignment:
| Q |
5 |
atgaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcag |
104 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10032886 |
atgaatgtagctaaatcattgacaaggtcatgcatgacaaacttttctccacgagcatcatcgcttaattgttgaattaacgatctcgatagcaattcag |
10032787 |
T |
|
| Q |
105 |
caaaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaag |
204 |
Q |
| |
|
|||| |||||||| || || |||||||||||||| || |||||||||||||||||||| |||||||||||||||| ||||| |||| ||||||| ||||| |
|
|
| T |
10032786 |
caaaacaatcatcgcctaattcctccaacttttttcccccttgagaacaatcaaggaagccttctgccatccacagcaaaaccaatgtcttcctttcaag |
10032687 |
T |
|
| Q |
205 |
tgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatca |
304 |
Q |
| |
|
||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
10032686 |
tggataatcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagagggaagatattgataactcaaatgcaatgcaggaagaatattatca |
10032587 |
T |
|
| Q |
305 |
tttgataagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaagccc |
378 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| ||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
10032586 |
tttgataagttccatatgtcgctgttcaaaattgaagtccactctgttatgtctacctttgaacgtagaagccc |
10032513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 10 - 375
Target Start/End: Complemental strand, 10261576 - 10261211
Alignment:
| Q |
10 |
tgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagcaaac |
109 |
Q |
| |
|
||||||||||||| | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10261576 |
tgtagctaaatcactgacaaggtcatgcatgacaaacttttctccacgagcatcatcgcttaattgttgaattaacgatctcgataacaattcagcaaaa |
10261477 |
T |
|
| Q |
110 |
caatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggt |
209 |
Q |
| |
|
|||||||| || || |||||||||||||| || |||||||||||||||||||| |||||||||||||||| ||||| |||| ||||||| |||||||| | |
|
|
| T |
10261476 |
caatcatcgcctaattcctccaacttttttcccccttgagaacaatcaaggaagccttctgccatccacagcaaaaccaatgtcttcctttcaagtggat |
10261377 |
T |
|
| Q |
210 |
agtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttga |
309 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10261376 |
aatcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagagggaagatattgataactcaaatgcaaagcaggaagaatattatcatttga |
10261277 |
T |
|
| Q |
310 |
taagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaag |
375 |
Q |
| |
|
||||||||||||||| |||| ||||||| ||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
10261276 |
taagttccatatgtcgctgttcaaaattgaagtccactctgttatgtctacctttgaacgtagaag |
10261211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 7 - 392
Target Start/End: Complemental strand, 9850620 - 9850235
Alignment:
| Q |
7 |
gaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagca |
106 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||| ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9850620 |
gaatgtagctaaatcattgacaaggtcatgcatgacaaatttttccccacgatcatcatcgcttaattgttgaattaacgatctcgataacaattcagca |
9850521 |
T |
|
| Q |
107 |
aaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtg |
206 |
Q |
| |
|
|| ||||||||||| || ||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||| |
|
|
| T |
9850520 |
aaacaatcatcacctaattcctccatctttttcccccgttgagaacaatcaaggaagccttctgccatccacaacaaaaccaattgcttcctatcgagtg |
9850421 |
T |
|
| Q |
207 |
ggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatt |
306 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
9850420 |
ggcaatcctttggaaaaattgaacaatatgcaaagcatcttttcaaatgagagggaagatattgataactcaaatgcaatgcaggaagaatattatcatt |
9850321 |
T |
|
| Q |
307 |
tgataagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaagcccacctattgttttag |
392 |
Q |
| |
|
||||||||||||||||||| |||| ||||||| ||||||||| |||| |||||||||||| ||||||| || ||||||||||||| |
|
|
| T |
9850320 |
tgataagttccatatgtcactgttcaaaattgaagtccactcacttatgtctacctttgaacgtagaagtcctcctattgttttag |
9850235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 5 - 392
Target Start/End: Complemental strand, 10196556 - 10196169
Alignment:
| Q |
5 |
atgaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcag |
104 |
Q |
| |
|
|||| |||||| ||||| || |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10196556 |
atgactgtagccaaatcgttgacaaggtcatgcatgacaaacttttctccacgagcatcattgcttaattgttgaattaacgatctcgataacaattcag |
10196457 |
T |
|
| Q |
105 |
caaaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaag |
204 |
Q |
| |
|
|||| ||||||||||| || ||||||| | ||| || || ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
10196456 |
caaagcaatcatcacctaattcctccatcgcttttcccccatgagaacaatcaaggaagccttctgccatccacaacaaaaccaattgcttcctatcaag |
10196357 |
T |
|
| Q |
205 |
tgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatca |
304 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10196356 |
tgggtaatcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgacagggaagatattgataactcaaatgcaaagcaggaagaatattatca |
10196257 |
T |
|
| Q |
305 |
tttgataagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaagcccacctattgttttag |
392 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| ||||||||||||||| |||||||||||| ||||||| || |||| |||||||| |
|
|
| T |
10196256 |
tttgataagttccatatgtcgctgttcaaaattgaagtccactctgttatttctacctttgaacgtagaagtcctcctagtgttttag |
10196169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 7 - 392
Target Start/End: Complemental strand, 9839742 - 9839357
Alignment:
| Q |
7 |
gaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagca |
106 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||| ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9839742 |
gaatgtagctaaatcattgacaaggtcatgcatgacaaatttttccccacgatcatcatcgcttaattgttgaattaacgatctcgataacaattcagca |
9839643 |
T |
|
| Q |
107 |
aaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtg |
206 |
Q |
| |
|
|| ||||||||||| || ||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||| |
|
|
| T |
9839642 |
aaacaatcatcacctaattcctccatctttttcccccgttgagaacaatcaaggaagccttctgccatccacaacaaaaccaattccttcctatcgagtg |
9839543 |
T |
|
| Q |
207 |
ggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatt |
306 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
9839542 |
ggcaatcctttggaaaaattgaacaatatgcaaagcatcttttcaaatgagagggaagatattgataactcaaatgcaatgcaggaagaatattatcatt |
9839443 |
T |
|
| Q |
307 |
tgataagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaagcccacctattgttttag |
392 |
Q |
| |
|
|||||||||||||||||| |||| ||||||| ||||||||| |||| |||||||||||| ||||||| || ||||||||||||| |
|
|
| T |
9839442 |
tgataagttccatatgtcgctgttcaaaattgaagtccactcacttatgtctacctttgaacgtagaagtcctcctattgttttag |
9839357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 5 - 390
Target Start/End: Complemental strand, 10089673 - 10089288
Alignment:
| Q |
5 |
atgaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcag |
104 |
Q |
| |
|
|||| |||||| ||||| || |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10089673 |
atgactgtagccaaatcgttgacaaggtcatgcatgacaaacttttctccacgagcatcattgcttaattgttgaattaacgatctcgataacaattcag |
10089574 |
T |
|
| Q |
105 |
caaaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaag |
204 |
Q |
| |
|
|||| ||||||||||| || ||||||| | ||| || || ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
10089573 |
caaagcaatcatcacctaattcctccatcgcttttcccccatgagaacaatcaaggaagccttctgccatccacaacaaaaccaattgcttcctatcaag |
10089474 |
T |
|
| Q |
205 |
tgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatca |
304 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10089473 |
tgggtaatcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgacagggaagatattgataactcaaatgcaaagcaggaagaatattatca |
10089374 |
T |
|
| Q |
305 |
tttgataagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaagcccacctattgtttt |
390 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| ||||||||||||||| |||||||||||| ||||||| || |||| |||||| |
|
|
| T |
10089373 |
tttgataagttccatatgtcgctgttcaaaattgaagtccactctgttatttctacctttgaacgtagaagtcctcctagtgtttt |
10089288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 7 - 392
Target Start/End: Complemental strand, 10127809 - 10127424
Alignment:
| Q |
7 |
gaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagca |
106 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10127809 |
gaatgtagataaatcattgacaaggtcatgcatgacaaacttttctccacgagcatcatcgcttaattgttgaattaatgatctcgataacaattcagca |
10127710 |
T |
|
| Q |
107 |
aaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtg |
206 |
Q |
| |
|
|| ||||||||||| || |||||||||| ||| || |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||||| |
|
|
| T |
10127709 |
aaacaatcatcacctaattcctccaactcttttcccccttgagaacaatcaaggaagccttctgccatccacaacaaaaccaatgtcttcttatcaagtg |
10127610 |
T |
|
| Q |
207 |
ggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatt |
306 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
10127609 |
ggaaatcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagagggaagatattgataactcaaatgcaatgcaggaagaatattatcatt |
10127510 |
T |
|
| Q |
307 |
tgataagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaagcccacctattgttttag |
392 |
Q |
| |
|
| ||||||||||||| ||||| ||||||| ||||||||||||||| |||||||||||| ||||||| || |||| |||||||| |
|
|
| T |
10127509 |
tcgcaagttccatatgttgttgttcaaaattgaagtccactctgttatgtctacctttgaacgtagaagtcctcctagtgttttag |
10127424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 7 - 392
Target Start/End: Original strand, 10433232 - 10433617
Alignment:
| Q |
7 |
gaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagca |
106 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10433232 |
gaatgtagataaatcattgacaaggtcatgcatgacaaacttttctccacgatcatcatcggttaatcgttgaattaacgatctcgataacaattcagca |
10433331 |
T |
|
| Q |
107 |
aaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtg |
206 |
Q |
| |
|
|| ||||||| ||| || |||||||||| ||| || |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||| |
|
|
| T |
10433332 |
aaacaatcattacctaattcctccaactcttttcccccttgagaacaatcaaggaagccttctgccatccacaacaaaaccaattgcttcctatcgagtg |
10433431 |
T |
|
| Q |
207 |
ggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatt |
306 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
10433432 |
ggcaatcctttggaaaaattgaacaatatgcaaagcatcttttcaaacgagagggaagatattgataactcaaatgcaatgcaggaagaatattatcatt |
10433531 |
T |
|
| Q |
307 |
tgataagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaagcccacctattgttttag |
392 |
Q |
| |
|
|||||||||||||| || |||| ||||||| |||||||||||||||||||||||||||| ||| ||| || ||||||||||||| |
|
|
| T |
10433532 |
tgataagttccatacgttgctgttcaaaattgaagtccactctgttatatctacctttgaacgtaaaagtcctcctattgttttag |
10433617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 7 - 392
Target Start/End: Original strand, 10362986 - 10363371
Alignment:
| Q |
7 |
gaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagca |
106 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||| ||||| ||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10362986 |
gaatgttgctaaatcattaacaaggtcatgcatgacaaatttttccccacgatcatcattgcttaattgttgaattaacgatctcgataacaattcagca |
10363085 |
T |
|
| Q |
107 |
aaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtg |
206 |
Q |
| |
|
|| ||||||||||| || ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||| |
|
|
| T |
10363086 |
aaacaatcatcacctaattcctccaactttttccccccttgagaacaatcaaggaagccttctgccatccacaacaaaaccaattgcttcctatcgagtg |
10363185 |
T |
|
| Q |
207 |
ggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatt |
306 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10363186 |
ggcaatcctttggaaaaattgaacaatatgcaaagcatcttttcaagtgagagggaagatattgataactcaaatgcaaagcaggaagaatattatcatt |
10363285 |
T |
|
| Q |
307 |
tgataagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaagcccacctattgttttag |
392 |
Q |
| |
|
| ||||||||||||| |||| ||||||| ||||||||||||||| |||||||||||| | ||||| || |||| |||||||| |
|
|
| T |
10363286 |
tcgcaagttccatatgttgctgttcaaaattgaagtccactctgttatgtctacctttgaacggagaagtcctcctagtgttttag |
10363371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 7 - 392
Target Start/End: Complemental strand, 10664407 - 10664022
Alignment:
| Q |
7 |
gaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagca |
106 |
Q |
| |
|
|||||||||||||||||| | |||||||||||| ||||||||||| ||| |||||||||| ||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10664407 |
gaatgtagctaaatcattgataaggtcatgcatcacaaacttttcgccatgagcatcatcgcttgattgttgaattaaagatctcgataacaattcagca |
10664308 |
T |
|
| Q |
107 |
aaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtg |
206 |
Q |
| |
|
|| ||||||||||| || ||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
10664307 |
aaacaatcatcacctaattcctccattgttttccccccttgagaacaatcaaggaagccttctgccatccacaacaaaaccaattgcttcctatcaagtg |
10664208 |
T |
|
| Q |
207 |
ggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatt |
306 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
10664207 |
ggtaatcctttggaaaaattgaacaatatgcaaaacatctcttcaaatgagagggaagatattgataactcaaatgcaatgcaggaagaatattatcatt |
10664108 |
T |
|
| Q |
307 |
tgataagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaagcccacctattgttttag |
392 |
Q |
| |
|
||||||||||||| |||| ||||||| ||||||||||||||| |||||||||||| ||||||| || |||| |||||||| |
|
|
| T |
10664107 |
gcgcaagttccatatgttgctgttcaaaattgaagtccactctgttatgtctacctttgaacgtagaagtcctcctaatgttttag |
10664022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 7 - 322
Target Start/End: Complemental strand, 10581491 - 10581176
Alignment:
| Q |
7 |
gaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagca |
106 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||| ||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| || |
|
|
| T |
10581491 |
gaatgtagctaaatcattgacaaggtcatgcatgacaaatttttccccacgatcatcatcgcttaattgttgaattaacgatctcgataacaattcaaca |
10581392 |
T |
|
| Q |
107 |
aaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtg |
206 |
Q |
| |
|
|| ||||||||||| || ||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||| |
|
|
| T |
10581391 |
aaacaatcatcacctaattcctccaactttttccccccttgtgaacaatcaaggaagccttctgccatccacaacaaaaccaattgcttcctatcgagtg |
10581292 |
T |
|
| Q |
207 |
ggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatt |
306 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
10581291 |
ggcaatcctttggaaaaattgaacaatatgcaaagcatcttttcaaatgagagggaagatattgataactcaaatgcaatgcaggaagaatattatcatt |
10581192 |
T |
|
| Q |
307 |
tgataagttccatatg |
322 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
10581191 |
tcgcaagttccatatg |
10581176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 7 - 392
Target Start/End: Original strand, 10375033 - 10375418
Alignment:
| Q |
7 |
gaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagca |
106 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
10375033 |
gaatgtagataaatcattgacaaggtcatgcatgacaaacttttttccacaagcatcatcgcttaattgttgaattaatgatctcaataacaattcagca |
10375132 |
T |
|
| Q |
107 |
aaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtg |
206 |
Q |
| |
|
|| ||||||| || || |||||||| | ||| || ||||||||||||||||| || |||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
10375133 |
aaacaatcattgcctaattcctccaaatcttttcccccttgagaacaatcaagaaagccttctgccatccacaacaaaaccaattgcttcctatcaagtg |
10375232 |
T |
|
| Q |
207 |
ggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatt |
306 |
Q |
| |
|
|| | ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| | |||||| |
|
|
| T |
10375233 |
ggcaatccttgggaaaaattgaacaatatgcaaaacatcttttcaaatgagagggaagatattgataactcaaatgcaaagcaggaagaatgtaatcatt |
10375332 |
T |
|
| Q |
307 |
tgataagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaagcccacctattgttttag |
392 |
Q |
| |
|
| ||||||||||| | |||| ||||| | ||||||||||||| ||||||||||||| ||||||| || ||||||||||||| |
|
|
| T |
10375333 |
aggtaagttccatacattgctgttcaaaatggatgtccactctgttacatctacctttgaacgtagaagtcctcctattgttttag |
10375418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 10 - 392
Target Start/End: Complemental strand, 10528236 - 10527854
Alignment:
| Q |
10 |
tgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagcaaac |
109 |
Q |
| |
|
|||||||||||| || |||||||||||||| | |||||||| ||||||| || ||| | || |||| |||||||| ||||| || |||||||||||||| |
|
|
| T |
10528236 |
tgtagctaaatcgttgacaaggtcatgcatgaaaaacttttttccacgaccaacatgatttgattgctgaattaaggatctggacaacaattcagcaaag |
10528137 |
T |
|
| Q |
110 |
caatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggt |
209 |
Q |
| |
|
|| |||||||| | ||||| | |||| || ||||||||||||| ||||| |||||||||||||||||||||| |||| ||||| ||||||||||| |
|
|
| T |
10528136 |
cagtcatcacctacttcctctgccatttttccctcttgagaacaatcgaggaagccttctgccatccacaacaaaaccaatgtcttcttatcaagtggga |
10528037 |
T |
|
| Q |
210 |
agtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttga |
309 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10528036 |
aatcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagagggaagatattgataactcaaatgcaaagcaggaagaatattatcatttga |
10527937 |
T |
|
| Q |
310 |
taagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaagcccacctattgttttag |
392 |
Q |
| |
|
||||||||||| || |||| ||||||| ||||||||||||||| |||||||||||| ||||||| || ||||||||||||| |
|
|
| T |
10527936 |
taagttccatacgttgctgttcaaaattgaagtccactctgttatgtctacctttgaacgtagaagtcctcctattgttttag |
10527854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 10 - 392
Target Start/End: Complemental strand, 10672560 - 10672178
Alignment:
| Q |
10 |
tgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagcaaac |
109 |
Q |
| |
|
||||| |||||| || | ||||||||| || | |||||||| ||||||| || ||||| || |||| |||||||| ||||| || |||||||||||||| |
|
|
| T |
10672560 |
tgtagttaaatcgttgataaggtcatgtatgaaaaacttttttccacgaccaacatcatttgattgctgaattaaggatctggacaacaattcagcaaag |
10672461 |
T |
|
| Q |
110 |
caatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggt |
209 |
Q |
| |
|
|| |||||||| | ||||| | |||| || ||||||||||||| ||||| |||||||||||||||||||||| |||| ||||| ||||||||||| |
|
|
| T |
10672460 |
cagtcatcacctacttcctctgccatttttccctcttgagaacaatcgaggaagccttctgccatccacaacaaaaccaatgtcttcttatcaagtggga |
10672361 |
T |
|
| Q |
210 |
agtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttga |
309 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10672360 |
aatcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagagggaagatattgataactcaaatgcaaagcaggaagaatattatcatttcg |
10672261 |
T |
|
| Q |
310 |
taagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaagcccacctattgttttag |
392 |
Q |
| |
|
||||| ||||||| |||| ||||||| ||||||||| ||||| |||||||||||| ||||||| || ||||||||||||| |
|
|
| T |
10672260 |
caagtttcatatgttgctgttcaaaattgaagtccactcagttatgtctacctttgaacgtagaagtcctcctattgttttag |
10672178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 10 - 392
Target Start/End: Complemental strand, 10078147 - 10077765
Alignment:
| Q |
10 |
tgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagcaaac |
109 |
Q |
| |
|
|||||| |||||||| |||||||||||||| | |||||||||||||||| ||| |||| || ||||||||||||| ||||| || || ||||||||||| |
|
|
| T |
10078147 |
tgtagccaaatcattgacaaggtcatgcatgaaaaacttttctccacgaccattatcatttgattgttgaattaaggatctggacaataattcagcaaag |
10078048 |
T |
|
| Q |
110 |
caatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggt |
209 |
Q |
| |
|
|||||| |||| || || |||| | ||||| | || || ||| ||||||| || |||||||||||||||| ||||| |||||||||||| ||||||| || |
|
|
| T |
10078047 |
caatcaccacctaattcttccatcgttttctccccatgtgaataatcaagaaagccttctgccatccacagcaaaaccaatttcttcctgtcaagtgtgt |
10077948 |
T |
|
| Q |
210 |
agtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttga |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
10077947 |
gaccctttggaaaaattgaacaatatgcaaaacatattttcaaatgagagggaagacattgataactcaaatgcaaagcaggaagaattttatcatttgg |
10077848 |
T |
|
| Q |
310 |
taagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaagcccacctattgttttag |
392 |
Q |
| |
|
||||||||||| | | | || ||||||| ||||||||| ||||||||||||||||| |||||| || ||||||||||||| |
|
|
| T |
10077847 |
taagttccatacattactattcaaaattgttgtccactctattatatctacctttgaacctagaagtcctcctattgttttag |
10077765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 7 - 321
Target Start/End: Original strand, 11781170 - 11781484
Alignment:
| Q |
7 |
gaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagca |
106 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||||| ||| || ||||||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
11781170 |
gaatgtagctaaatcattgacaaggtcatgcatgacaaacttctcttcatgagcatcattgcttaattgttgaattaacgatcttgataacaattcagca |
11781269 |
T |
|
| Q |
107 |
aaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtg |
206 |
Q |
| |
|
|| ||||||||||| | ||||||| | || | ||||||||| ||||||||| |||||||||||||||||||||| || ||| ||||| ||||||| |
|
|
| T |
11781270 |
aaacaatcatcaccaacttcctccaccacattttcgccttgagaataatcaaggaggccttctgccatccacaacaaaaccagttttttcctctcaagtg |
11781369 |
T |
|
| Q |
207 |
ggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatt |
306 |
Q |
| |
|
|||| |||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||||| |||||||||||||| | || |||||||| |
|
|
| T |
11781370 |
ggtaatcctttggaaaaatagaacaataggcgaaacatcttttcaaatgagaaggaagatattgataactcaaatgcaaagcaggcaaaactttatcatt |
11781469 |
T |
|
| Q |
307 |
tgataagttccatat |
321 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
11781470 |
tcgtaagttccatat |
11781484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 1 - 348
Target Start/End: Complemental strand, 10518372 - 10518025
Alignment:
| Q |
1 |
tgagatgaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaat |
100 |
Q |
| |
|
||||| ||||||||||||||| | |||||||||||||| ||| |||||| | || ||||||||| ||||||||||||||||| ||||| ||||| ||| |
|
|
| T |
10518372 |
tgagacgaatgtagctaaatcgtggacaaggtcatgcatgacacactttttttcatgagcatcattgcttaattgttgaattaatgatcttgataataat |
10518273 |
T |
|
| Q |
101 |
tcagcaaaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctat |
200 |
Q |
| |
|
|||||||| ||||||||||| | ||||||| | || || |||||||| |||||||||| |||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
10518272 |
tcagcaaaacaatcatcaccaatttcctccatcgcattttcatcttgagaataatcaaggaaaccttctgccatccacaacaaaaccaattttttcctct |
10518173 |
T |
|
| Q |
201 |
caagtgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatatt |
300 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||||| |||||||||||||| | ||| || |
|
|
| T |
10518172 |
caagtgggtaatcctttggaaaaatagaacaataggcgaaacatcttttcaaatgagaaggaagatattgataactcaaatgcaaagcaggcaaaatttt |
10518073 |
T |
|
| Q |
301 |
atcatttgataagttccatatgtcattgtttaaaattgcagtccactc |
348 |
Q |
| |
|
||||||| |||||||||||||| |||||| ||||| || |||||| |
|
|
| T |
10518072 |
atcatttcgtaagttccatatgttgctgtttagaattgaagaccactc |
10518025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 10 - 392
Target Start/End: Complemental strand, 10185120 - 10184738
Alignment:
| Q |
10 |
tgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagcaaac |
109 |
Q |
| |
|
|||||| |||||||| |||||||||||||| | |||||||||||||||| ||| |||| || ||||||||||||| ||||| || || ||||||||||| |
|
|
| T |
10185120 |
tgtagccaaatcattgacaaggtcatgcatgaaaaacttttctccacgaccattatcatttgattgttgaattaaggatctggacaataattcagcaaag |
10185021 |
T |
|
| Q |
110 |
caatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggt |
209 |
Q |
| |
|
||||||||||| || || |||| | ||||| | || || ||| ||||||| || |||||||||||||||| ||||| |||||||||||| ||| ||| || |
|
|
| T |
10185020 |
caatcatcacctaattcttccatcgttttctccccatgtgaataatcaagaaagccttctgccatccacagcaaaaccaatttcttcctgtcatgtgtgt |
10184921 |
T |
|
| Q |
210 |
agtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttga |
309 |
Q |
| |
|
||||||||||||| |||||||||||||||||| ||||||||||||| |||||| |||||||||| |||||||||| ||||||||| |||||||||| |
|
|
| T |
10184920 |
gaccctttggaaaaatagaacaatatgcaaaacatattttcaaatgagagggaagacattgataactcaaatgcaaagtaggaagaattttatcatttgg |
10184821 |
T |
|
| Q |
310 |
taagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaagcccacctattgttttag |
392 |
Q |
| |
|
||||||||||| | | || ||||||| ||||||||| ||||||||||||| ||| |||||| || ||||||||||||| |
|
|
| T |
10184820 |
taagttccatacattgctattcaaaattgttgtccactctattatatctaccttcgaacctagaagtcctcctattgttttag |
10184738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 5 - 349
Target Start/End: Complemental strand, 10501457 - 10501113
Alignment:
| Q |
5 |
atgaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcag |
104 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||| ||| |||||||||||| |||||||||| || ||||||||||||||||||| ||||||||||| |
|
|
| T |
10501457 |
atgaatgttgctaaatcattaacaaggtcatgcatgacatacttttctccacaagcatcatcatttgattgttgaattaacgatctagataacaattcga |
10501358 |
T |
|
| Q |
105 |
caaaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaag |
204 |
Q |
| |
|
|||| |||||||||| | |||||| | |||| | ||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| || |
|
|
| T |
10501357 |
caaaataatcatcaccgacttcctccgccgttttttcgccttgagaataatcaaggaagccttctgccatccacaacaaaaccaatttcttcctatccag |
10501258 |
T |
|
| Q |
205 |
tgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatca |
304 |
Q |
| |
|
|||||| || ||||| ||||| |||||||| ||||| |||||||| |||||||| ||||||||||||||||| |||| ||||| || | ||| ||||| |
|
|
| T |
10501257 |
tgggtaatcttttgggaaaatagaacaataggcaaagcatctttttaaatgagagggaagatattgataactcaaatacaaagtgggcaaaattgtatca |
10501158 |
T |
|
| Q |
305 |
tttgataagttccatatgtcattgtttaaaattgcagtccactct |
349 |
Q |
| |
|
||| ||||||||||||||| | || | |||||||||||||||| |
|
|
| T |
10501157 |
tttcttaagttccatatgtcgctattcagaattgcagtccactct |
10501113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 10 - 254
Target Start/End: Original strand, 13853871 - 13854115
Alignment:
| Q |
10 |
tgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagcaaac |
109 |
Q |
| |
|
||||||||| || || |||||||||||||| | ||| ||| |||| | |||||||| || ||||||||||||| ||||| ||| |||||||| ||| |
|
|
| T |
13853871 |
tgtagctaagtcgttgacaaggtcatgcatgaaaaagatttttccaaaaccatcatcatttgattgttgaattaaggatctggatgacaattcaagaaag |
13853970 |
T |
|
| Q |
110 |
caatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggt |
209 |
Q |
| |
|
||||||||||| || ||||| | |||| || |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
13853971 |
caatcatcaccaaattcctcagtcatttttcccccttgagaacaatcaaggaagccttctgccatccacaacaaaaccaattgcttcctatcaagtgggt |
13854070 |
T |
|
| Q |
210 |
agtcctttggaaaaattgaacaatatgcaaaacatcttttcaaat |
254 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13854071 |
agtcctttggaaaaattgaacaatatgcaaaacatcttttcaaat |
13854115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 10 - 349
Target Start/End: Original strand, 11159208 - 11159547
Alignment:
| Q |
10 |
tgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagcaaac |
109 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||||| | | | | || || || |||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
11159208 |
tgtagctaaatcattaacaaggtcatgcatgacaaacttttgttttctggtaccaacatgtagttgttgaattaatgatctggataacaattcagcaaaa |
11159307 |
T |
|
| Q |
110 |
caatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggt |
209 |
Q |
| |
|
||||||||||| | || |||| ||| | | |||||| |||||||||| |||||||||||||||||||||| ||||| |||||||||||||| | |
|
|
| T |
11159308 |
caatcatcacctacttcttccatggctttttcgtcctgagaataatcaaggaagccttctgccatccacaacaaaaccaattgcttcctatcaagtgtat |
11159407 |
T |
|
| Q |
210 |
agtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttga |
309 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||||||| || || ||||||||||||||||| | | |||| ||||| | || ||| ||||||| |
|
|
| T |
11159408 |
agtcctttggaaaaatggaacaatatgaaaaacatcttttcaattgggagggaagatattgataactcagaagcaatgcaggtaaaacattgtcatttgg |
11159507 |
T |
|
| Q |
310 |
taagttccatatgtcattgtttaaaattgcagtccactct |
349 |
Q |
| |
|
|||||||||||| | ||||| |||| | ||||||||||| |
|
|
| T |
11159508 |
taagttccatattttgttgttcaaaacttcagtccactct |
11159547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 10 - 349
Target Start/End: Complemental strand, 8862164 - 8861825
Alignment:
| Q |
10 |
tgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagcaaac |
109 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||||| | | | || | || || || |||||||||||| ||||| ||||||| ||||||||| |
|
|
| T |
8862164 |
tgtagctaaatcattaacaaggtcatgcatgacaaacttttgttctctagtaccaacatgtagttgttgaattaatgatctggataacagttcagcaaaa |
8862065 |
T |
|
| Q |
110 |
caatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggt |
209 |
Q |
| |
|
||||||||||| | || |||| ||| || ||| |||| ||||||||| |||||||||||||||||||| | ||||| |||||||| ||||| | |
|
|
| T |
8862064 |
caatcatcacctacatcttccatgggtttttcatctttagaatgatcaaggaagccttctgccatccacaacaataccaattgcttcctattaagtgaat |
8861965 |
T |
|
| Q |
210 |
agtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttga |
309 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||||||| || || ||||||||||||||||| | | |||| ||||| | || ||| ||||||| |
|
|
| T |
8861964 |
agtcctttggaaaaatggaacaatatgaaaaacatcttttcaattgggagggaagatattgataactcagaagcaatgcaggtaaaacattgtcatttgg |
8861865 |
T |
|
| Q |
310 |
taagttccatatgtcattgtttaaaattgcagtccactct |
349 |
Q |
| |
|
|||||||||||| | ||||| |||| | ||||||||||| |
|
|
| T |
8861864 |
taagttccatattttgttgttcaaaacttcagtccactct |
8861825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 158 - 367
Target Start/End: Complemental strand, 13171761 - 13171552
Alignment:
| Q |
158 |
aggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgag |
257 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||| |||| | || ||||| | ||||| ||||||||||| ||||| |||||||||||||||||||| | |
|
|
| T |
13171761 |
aggaagccttctgccatccataacaaaatcaattccttcttgtccagtggaaaatccttcggaaaaattgagcaataggcaaaacatcttttcaaatgtg |
13171662 |
T |
|
| Q |
258 |
atggaagatattgataacttaaatgcaaagcaggaagaatattatcatttgataagttccatatgtcattgtttaaaattgcagtccactctgttatatc |
357 |
Q |
| |
|
| ||||||||||||||||||| | |||||||||| | |||||||||||||| |||||||||||||||| | |||| |||||||||||||||| || ||| |
|
|
| T |
13171661 |
agggaagatattgataacttagacgcaaagcaggtaaaatattatcatttggtaagttccatatgtcactatttagaattgcagtccactcttttgcatc |
13171562 |
T |
|
| Q |
358 |
tacctttgaa |
367 |
Q |
| |
|
|||||||||| |
|
|
| T |
13171561 |
tacctttgaa |
13171552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 158 - 367
Target Start/End: Complemental strand, 13344819 - 13344610
Alignment:
| Q |
158 |
aggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgag |
257 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||| |||| | || ||||| | ||||||||||||||||| ||||| |||||||||||||||||||| | |
|
|
| T |
13344819 |
aggaagccttctgccatccataacaaaatcaattccttcttgtccagtggaaaatcctttggaaaaattgagcaataggcaaaacatcttttcaaatgtg |
13344720 |
T |
|
| Q |
258 |
atggaagatattgataacttaaatgcaaagcaggaagaatattatcatttgataagttccatatgtcattgtttaaaattgcagtccactctgttatatc |
357 |
Q |
| |
|
| ||||||||||||||||||| | | |||||||| | |||||||||||||| |||||||||||||||| | |||| |||||||||||||||| || ||| |
|
|
| T |
13344719 |
agggaagatattgataacttagacgtaaagcaggtaaaatattatcatttggtaagttccatatgtcactatttagaattgcagtccactcttttgcatc |
13344620 |
T |
|
| Q |
358 |
tacctttgaa |
367 |
Q |
| |
|
|||||||||| |
|
|
| T |
13344619 |
tacctttgaa |
13344610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 10 - 321
Target Start/End: Complemental strand, 10890184 - 10889873
Alignment:
| Q |
10 |
tgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagcaaac |
109 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||| ||| ||| || ||||||| | ||| |||||||| ||||| ||||||||||||| ||| |
|
|
| T |
10890184 |
tgtagctaaatcattaacaaggtcatgcatgacaaatatttgtccttcagaatcatcatacagttgctgaattaatgatctagataacaattcagaaaag |
10890085 |
T |
|
| Q |
110 |
caatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggt |
209 |
Q |
| |
|
|| |||||||| | || |||| ||| ||| |||||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||||| | |
|
|
| T |
10890084 |
cactcatcacctacttcttccatagcttttccatcttgagaatgatcaatgaagccttctgccatccacaacaaaaccaatttcttcctatcaagtgtat |
10889985 |
T |
|
| Q |
210 |
agtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttga |
309 |
Q |
| |
|
|||||||||||||||| ||||| |||| ||||||||||||||| || || ||||||||||||||||| | | |||| ||||| | || ||| ||||||| |
|
|
| T |
10889984 |
agtcctttggaaaaatggaacagtatgaaaaacatcttttcaattgggagggaagatattgataactcagaagcaatgcaggtaaaacattgtcatttgg |
10889885 |
T |
|
| Q |
310 |
taagttccatat |
321 |
Q |
| |
|
|||||||||||| |
|
|
| T |
10889884 |
taagttccatat |
10889873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 158 - 367
Target Start/End: Complemental strand, 13333634 - 13333425
Alignment:
| Q |
158 |
aggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgag |
257 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||| |||| | |||||||| | ||||| ||||||||||| ||||| |||||||||||||||||||| | |
|
|
| T |
13333634 |
aggaagccttctgccatccataacaaaatcaattccttcttgtcaagtggaaaatccttcggaaaaattgagcaataggcaaaacatcttttcaaatgtg |
13333535 |
T |
|
| Q |
258 |
atggaagatattgataacttaaatgcaaagcaggaagaatattatcatttgataagttccatatgtcattgtttaaaattgcagtccactctgttatatc |
357 |
Q |
| |
|
| ||||||||||||||||||| | |||||||||| | ||| ||||||||| |||||||||||||||| | |||| |||||||||||||||| || ||| |
|
|
| T |
13333534 |
agggaagatattgataacttagacgcaaagcaggtaaaattgtatcatttggtaagttccatatgtcactatttagaattgcagtccactcttttgcatc |
13333435 |
T |
|
| Q |
358 |
tacctttgaa |
367 |
Q |
| |
|
|||||||||| |
|
|
| T |
13333434 |
tacctttgaa |
13333425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 145 - 367
Target Start/End: Complemental strand, 13161723 - 13161501
Alignment:
| Q |
145 |
ttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggtagtcctttggaaaaattgaacaatatgcaaaacat |
244 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| ||||||||||||| |||| | |||||||| | ||||| ||||||||||| ||||| ||||||||| |
|
|
| T |
13161723 |
ttgagaacgctctaggaagccttctgccatccataacaaaatcaattccttcttgtcaagtggaaaatccttcggaaaaattgagcaataggcaaaacat |
13161624 |
T |
|
| Q |
245 |
cttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttgataagttccatatgtcattgtttaaaattgcagtcc |
344 |
Q |
| |
|
||||||||||| || ||||||||||||||||||| | |||||||||| | ||||| |||||||| |||||||||||||||| | |||| ||||| | ||| |
|
|
| T |
13161623 |
cttttcaaatgtgagggaagatattgataacttagacgcaaagcaggtaaaatatgatcatttggtaagttccatatgtcactatttagaattgtactcc |
13161524 |
T |
|
| Q |
345 |
actctgttatatctacctttgaa |
367 |
Q |
| |
|
||||| | ||||||||||||| |
|
|
| T |
13161523 |
actctttagcatctacctttgaa |
13161501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 158 - 367
Target Start/End: Complemental strand, 13290395 - 13290186
Alignment:
| Q |
158 |
aggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgag |
257 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||| |||| | ||||||| | ||||| ||||||||||| ||||| |||||||||||||||||||| | |
|
|
| T |
13290395 |
aggaagccttctgccatccataacaaaatcaattccttcttgtcaagtgaaaaatccttcggaaaaattgagcaataggcaaaacatcttttcaaatgtg |
13290296 |
T |
|
| Q |
258 |
atggaagatattgataacttaaatgcaaagcaggaagaatattatcatttgataagttccatatgtcattgtttaaaattgcagtccactctgttatatc |
357 |
Q |
| |
|
| ||||||||||||||||||| | |||||||||| | |||||||||||||| |||||||||||||||| | |||| ||||| | |||||||| | ||| |
|
|
| T |
13290295 |
agggaagatattgataacttagacgcaaagcaggtaaaatattatcatttggtaagttccatatgtcactatttagaattgtactccactctttagcatc |
13290196 |
T |
|
| Q |
358 |
tacctttgaa |
367 |
Q |
| |
|
|||||||||| |
|
|
| T |
13290195 |
tacctttgaa |
13290186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 319
Target Start/End: Original strand, 11245814 - 11246121
Alignment:
| Q |
12 |
tagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagcaaacca |
111 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||| ||| ||| || |||| || | || |||||||| ||||| ||||||||||||| ||| || |
|
|
| T |
11245814 |
tagctaaatcattaacaaggtcatgcatgacaaatatttgtccttcagaatcaccatgcagtttctgaattaatgatctagataacaattcagaaaagca |
11245913 |
T |
|
| Q |
112 |
atcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggtag |
211 |
Q |
| |
|
|||||||| | || |||| ||| ||| |||||||| ||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| ||| |
|
|
| T |
11245914 |
ctcatcacctacttcttccatagcttttccatcttgagaatgatcaaggaagccttctgccatccacaacaaaaccaattgcttcctatcaagtggatag |
11246013 |
T |
|
| Q |
212 |
tcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttgata |
311 |
Q |
| |
|
||||| |||||||| |||||||| ||||||||||||||||| ||||| | |||||||||||| || | | |||| ||||| | || |||||||||| || |
|
|
| T |
11246014 |
tccttcggaaaaatcgaacaataggcaaaacatcttttcaattgagaggaaagatattgatagctcagaagcaatgcaggcaatatgttatcatttggta |
11246113 |
T |
|
| Q |
312 |
agttccat |
319 |
Q |
| |
|
|| ||||| |
|
|
| T |
11246114 |
agctccat |
11246121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 10 - 349
Target Start/End: Original strand, 11130217 - 11130556
Alignment:
| Q |
10 |
tgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagcaaac |
109 |
Q |
| |
|
||||||||| ||||| |||| || ||||| |||||| ||||||| | || |||| || || |||||||||||| || || ||||||| ||| ||||| |
|
|
| T |
11130217 |
tgtagctaagtcattaacaaaatcgtgcatgacaaacctttctcctctagtatcaacatgtagttgttgaattaatgacctggataacagttctgcaaaa |
11130316 |
T |
|
| Q |
110 |
caatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggt |
209 |
Q |
| |
|
||||||||||| | || |||| ||| | ||| |||| ||||||||| |||||||||||||||||||||| ||||| |||||||| ||||| | |
|
|
| T |
11130317 |
caatcatcacctacttcttccatgggtttttcgtctttagaatgatcaaggaagccttctgccatccacaacaaaaccaattgcttcctataaagtgtat |
11130416 |
T |
|
| Q |
210 |
agtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttga |
309 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||||||| || || ||||||||||||||||| | | |||| ||||| | | ||| ||||||| |
|
|
| T |
11130417 |
agtcctttggaaaaatggaacaatatgaaaaacatcttttcaattgggagggaagatattgataactcagaagcaatgcaggtaacacattgtcatttgg |
11130516 |
T |
|
| Q |
310 |
taagttccatatgtcattgtttaaaattgcagtccactct |
349 |
Q |
| |
|
|||||||||||| | |||| |||| | ||||||||||| |
|
|
| T |
11130517 |
taagttccatattttgttgtccaaaacttcagtccactct |
11130556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 10 - 349
Target Start/End: Original strand, 11148045 - 11148384
Alignment:
| Q |
10 |
tgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagcaaac |
109 |
Q |
| |
|
||||||||| ||||| |||| || ||||| |||||| ||||||| | || |||| || || ||||||||||| ||||| ||||||| ||||||||| |
|
|
| T |
11148045 |
tgtagctaactcattaacaaaatcgtgcatgacaaacctttctcctctagtatcaacatgtagctgttgaattaatgatctggataacagttcagcaaaa |
11148144 |
T |
|
| Q |
110 |
caatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggt |
209 |
Q |
| |
|
||||||||||| | || || | ||| | ||| |||| ||||||||| |||||||||||||||||||| | ||||| ||||||| ||||| | |
|
|
| T |
11148145 |
caatcatcacctacttcttcaatgggtttttcgtctttagaatgatcaaggaagccttctgccatccacaacaataccaattgattcctattaagtgaat |
11148244 |
T |
|
| Q |
210 |
agtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttga |
309 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||||||| || || ||||||||||||||||| | | |||| ||||| | | ||| ||||||| |
|
|
| T |
11148245 |
agtcctttggaaaaatggaacaatatgaaaaacatcttttcaattgggagggaagatattgataactcagaagcaatgcaggtaacacattgtcatttgg |
11148344 |
T |
|
| Q |
310 |
taagttccatatgtcattgtttaaaattgcagtccactct |
349 |
Q |
| |
|
|||||||||||| | ||||| |||| | ||||||||||| |
|
|
| T |
11148345 |
taagttccatattttgttgttcaaaacttcagtccactct |
11148384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 158 - 325
Target Start/End: Complemental strand, 13396219 - 13396052
Alignment:
| Q |
158 |
aggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgag |
257 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| || || ||| ||||||||||||| || ||||| |||||||||||||||||||| | |
|
|
| T |
13396219 |
aggaagccttctgccatccacaacaaaatcaatttcttcctattaaagggatagccctttggaaaaatcgagcaataggcaaaacatcttttcaaatggg |
13396120 |
T |
|
| Q |
258 |
atggaagatattgataacttaaatgcaaagcaggaagaatattatcatttgataagttccatatgtca |
325 |
Q |
| |
|
| ||||||| |||||| | | | ||||| ||| | |||||||||||||| || ||||||||||||| |
|
|
| T |
13396119 |
aaggaagatgttgatatgtcagaaacaaagaaggcataatattatcatttggtatgttccatatgtca |
13396052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 161 - 270
Target Start/End: Original strand, 11153415 - 11153524
Alignment:
| Q |
161 |
aatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatg |
260 |
Q |
| |
|
|||||||| |||||||||||||||| ||| | ||||||||||||| |||||||| |||||||||| |||||| | |||| | ||||||||||||| | |
|
|
| T |
11153415 |
aatccttcagccatccacaacaaaaccaactgcttcctatcaagttcatagtccttcggaaaaattggacaataagaaaaatacattttcaaatgagagg |
11153514 |
T |
|
| Q |
261 |
gaagatattg |
270 |
Q |
| |
|
|||||||||| |
|
|
| T |
11153515 |
gaagatattg |
11153524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 3913130 - 3913189
Alignment:
| Q |
214 |
ctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgata |
273 |
Q |
| |
|
||||||||||||||||||||| |||||||||| |||||| ||| |||||||| ||||| |
|
|
| T |
3913130 |
ctttggaaaaattgaacaataagcaaaacatcgcttcaaaggagcaggaagatagtgata |
3913189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 13171902 - 13171816
Alignment:
| Q |
14 |
gctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattca |
103 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||||| | |||||||| || ||||||||||||| | || |||||||||||| |
|
|
| T |
13171902 |
gctaaatcattgacaaggtcatgcataacaaatttttcttttc---catcatcatttgattgttgaattaagcacctggataacaattca |
13171816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 240
Target Start/End: Complemental strand, 2919972 - 2919944
Alignment:
| Q |
212 |
tcctttggaaaaattgaacaatatgcaaa |
240 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
2919972 |
tcctttggaaaaattgaacaatatgcaaa |
2919944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 220; Significance: 1e-121; HSPs: 2)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 7 - 322
Target Start/End: Original strand, 57599 - 57914
Alignment:
| Q |
7 |
gaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagca |
106 |
Q |
| |
|
|||||||||||||||||| | |||||||||||| ||||| ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
57599 |
gaatgtagctaaatcattgaaaaggtcatgcatgacaaatttttccccacgatcatcatcgcttaattgttgaattaacgatctcgataacaattcagca |
57698 |
T |
|
| Q |
107 |
aaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtg |
206 |
Q |
| |
|
|| ||||||||||| || ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||| |||| |||| |||| |
|
|
| T |
57699 |
aaacaatcatcacctaattcctccaactttttccccccttgagaacaatcaaggaaaccttctgccatccacaacaaaaccaattgcttcttatcgagtg |
57798 |
T |
|
| Q |
207 |
ggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatt |
306 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
57799 |
ggcaatcctttggaaaaattgaacaatatgcaaagcatcttttcaaatgagagggaagatattgataactcaaatgcaaagcaggaagaatattatcatt |
57898 |
T |
|
| Q |
307 |
tgataagttccatatg |
322 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
57899 |
tcgcaagttccatatg |
57914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 7 - 252
Target Start/End: Original strand, 56790 - 57035
Alignment:
| Q |
7 |
gaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagca |
106 |
Q |
| |
|
|||||||||||||||||| | |||||||||||| ||||| ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
56790 |
gaatgtagctaaatcattgataaggtcatgcatgacaaatttttccccacgatcatcatcgcttaattgttgaattaacgatctcgataacaattcagca |
56889 |
T |
|
| Q |
107 |
aaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtg |
206 |
Q |
| |
|
|| ||||||||||| || ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||| |||| |||| |||| |
|
|
| T |
56890 |
aaacaatcatcacctaattcctccaactttttccccccttgagaacaatcaaggaaaccttctgccatccacaacaaaaccaattgcttcttatcgagtg |
56989 |
T |
|
| Q |
207 |
ggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaa |
252 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
56990 |
ggcaatcctttggaaaaattgaacaatatgcaaagcatcttttcaa |
57035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 10 - 392
Target Start/End: Complemental strand, 26907775 - 26907393
Alignment:
| Q |
10 |
tgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagcaaac |
109 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| || ||||||||||||| ||||| |||| |||||||||||| |
|
|
| T |
26907775 |
tgtagctaaatcattgacaaggtcatgcatgacaaacttttccccacgagcatcatcatttgattgttgaattaaggatctggatagcaattcagcaaag |
26907676 |
T |
|
| Q |
110 |
caatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggt |
209 |
Q |
| |
|
|||||||||| || ||||| |||| ||| || ||||||||||| |||||||| |||||||||||||||||||| | ||||| ||| ||||||||||| | |
|
|
| T |
26907675 |
aaatcatcacctaactcctctaactcttttcccccttgagaacagtcaaggaagccttctgccatccacaacaagaccaattgctttctatcaagtggat |
26907576 |
T |
|
| Q |
210 |
agtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttga |
309 |
Q |
| |
|
| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
26907575 |
aatcctttggaaaaagtgaacaatatgcaaaacatcttttcaaatgagagggaaggtattgataactcaaatgcaaagctggaagaatattatcatttcg |
26907476 |
T |
|
| Q |
310 |
taagttccatatgtcattgtttaaaattgcagtccactctgttatatctacctttgaatgtagaagcccacctattgttttag |
392 |
Q |
| |
|
||||||||||| ||| ||||| ||||||| ||||||||||||||| |||||||||||| |||||| || |||| |||||||| |
|
|
| T |
26907475 |
taagttccatacgtcgttgttcaaaattgaagtccactctgttatgtctacctttgaacgtagaattcctcctagtgttttag |
26907393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 301
Target Start/End: Original strand, 25743564 - 25743650
Alignment:
| Q |
215 |
tttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatatta |
301 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||| || | ||| ||||||||||| ||||||||||| |||||| || ||||||||| |
|
|
| T |
25743564 |
tttggaaaaactgaacaataagcaaaacatctctttacatgcgatggaagataatgataacttaatctcaaagctgggagaatatta |
25743650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 172; Significance: 2e-92; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 5 - 324
Target Start/End: Complemental strand, 11485921 - 11485602
Alignment:
| Q |
5 |
atgaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcag |
104 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||||||||||| |
|
|
| T |
11485921 |
atgaatgtagctaaatcattgacaaggtcatgcatgacaaacttttctccatgagcatcatcatttgattgttgaattaacgatctagataacaattcag |
11485822 |
T |
|
| Q |
105 |
caaaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaag |
204 |
Q |
| |
|
|||| |||||||| || || ||||||| | ||| || ||| || |||| ||||| |||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
11485821 |
caaaacaatcatcgccgaattcctccaccactttttggccatgacaataatccaggaagccttctgccatccacaacaaaaccaatttcttcctatcaag |
11485722 |
T |
|
| Q |
205 |
tgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatca |
304 |
Q |
| |
|
|||||| ||||||||||||||||| ||||| || ||||||||||| |||||||| ||||||||||||||||| ||||||||||| || || || ||||| |
|
|
| T |
11485721 |
tgggtaatcctttggaaaaattgagcaataggcgaaacatctttttaaatgagagggaagatattgataactcaaatgcaaagctggcaggattgtatca |
11485622 |
T |
|
| Q |
305 |
tttgataagttccatatgtc |
324 |
Q |
| |
|
||| ||||||||||||||| |
|
|
| T |
11485621 |
ttttttaagttccatatgtc |
11485602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 5 - 324
Target Start/End: Original strand, 44956875 - 44957194
Alignment:
| Q |
5 |
atgaatgtagctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcag |
104 |
Q |
| |
|
||||||||||||||||| || |||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
44956875 |
atgaatgtagctaaatcgttgacaaggtcatgcatgacaaacttttctccatgagtatcatcacttaattgttgaattaaggatctagataacaattcag |
44956974 |
T |
|
| Q |
105 |
caaaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaag |
204 |
Q |
| |
|
|||| ||||||| | | | |||||| | ||| ||||||||||| ||||||||| |||||||||||||| ||||||| || ||| ||| || |||| |
|
|
| T |
44956975 |
caaaacaatcataaacaacttcctccgccactttttcaccttgagaaatatcaaggaagccttctgccatccataacaaaaccatttttttcttagcaag |
44957074 |
T |
|
| Q |
205 |
tgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatca |
304 |
Q |
| |
|
|||| ||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||||| |||||||||||||| | ||| ||||| |
|
|
| T |
44957075 |
caggtaaccctttggaaaaatagaacaataggcgaaacatcttttcaaatgagaaggaagatattgataactcaaatgcaaagcaggcaaaattgtatca |
44957174 |
T |
|
| Q |
305 |
tttgataagttccatatgtc |
324 |
Q |
| |
|
||| | ||||||||||||| |
|
|
| T |
44957175 |
tttcgttagttccatatgtc |
44957194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 72 - 349
Target Start/End: Original strand, 31678986 - 31679263
Alignment:
| Q |
72 |
attgttgaattaacgatctcgataacaattcagcaaaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgc |
171 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |||| | |||||||| | ||||||| ||| | ||||||||| |||||||| ||||| || |
|
|
| T |
31678986 |
attgttgaattaacgatctagataacaattcaacaaagtagtcatcaccaacttcctccattgctttttctccttgagaatgttcaaggaagccttcagc |
31679085 |
T |
|
| Q |
172 |
catccacaacaaaatcaatttcttcctatcaagtgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattga |
271 |
Q |
| |
|
|||||||| ||||| || || |||||||||||| || || |||||||| |||||||||||||| || |||||| ||||||||||||| |||||||||||| |
|
|
| T |
31679086 |
catccacagcaaaaccatttgcttcctatcaagaggataatcctttgggaaaattgaacaataagcgaaacatgttttcaaatgagaaggaagatattga |
31679185 |
T |
|
| Q |
272 |
taacttaaatgcaaagcaggaagaatattatcatttgataagttccatatgtcattgtttaaaattgcagtccactct |
349 |
Q |
| |
|
||||| ||| |||| ||||| |||| ||||||||||| || ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
31679186 |
taactcaaaagcaaggcagggagaacattatcatttggaaaattccatatgtcattgtttaaaattgcactccactct |
31679263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 73 - 348
Target Start/End: Original strand, 17852177 - 17852452
Alignment:
| Q |
73 |
ttgttgaattaacgatctcgataacaattcagcaaaccaatcatcacccaagtcctccaactttttcccaccttgagaacaatcaaggaatccttctgcc |
172 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||| ||| || || ||||||| ||||| ||| || ||||||||| | || ||||||||||||||| |
|
|
| T |
17852177 |
ttgttgaattaaggatctggataacaattcagaaaaacagtcgtcacccacttcctctgctgcttttcccccttgagaatagtcgaggaatccttctgcc |
17852276 |
T |
|
| Q |
173 |
atccacaacaaaatcaatttcttcctatcaagtgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgat |
272 |
Q |
| |
|
||||||||||||| ||||||||||||||||| || ||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
17852277 |
atccacaacaaaaccaatttcttcctatcaaatgagtaatcctttgagaaaattgaacaatatgcaaaacatattttcaaatgagacggaagatattgat |
17852376 |
T |
|
| Q |
273 |
aacttaaatgcaaagcaggaagaatattatcatttgataagttccatatgtcattgtttaaaattgcagtccactc |
348 |
Q |
| |
|
|||| ||||||||||| || ||||| ||||||||| ||| | |||||| || | || | ||||||||||||||| |
|
|
| T |
17852377 |
aactcaaatgcaaagccgggagaattttatcattttgtaattgccatatatcgctattcagaattgcagtccactc |
17852452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 240
Target Start/End: Complemental strand, 5988970 - 5988942
Alignment:
| Q |
212 |
tcctttggaaaaattgaacaatatgcaaa |
240 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
5988970 |
tcctttggaaaaattgaacaatatgcaaa |
5988942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 110; Significance: 2e-55; HSPs: 4)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 158 - 367
Target Start/End: Original strand, 135227 - 135436
Alignment:
| Q |
158 |
aggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgag |
257 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||| |||| | || ||||| | ||||| ||||||||||| ||||| |||||||||||||||||||| | |
|
|
| T |
135227 |
aggaagccttctgccatccataacaaaatcaattccttcttgtccagtggaaaatccttcggaaaaattgagcaataggcaaaacatcttttcaaatgtg |
135326 |
T |
|
| Q |
258 |
atggaagatattgataacttaaatgcaaagcaggaagaatattatcatttgataagttccatatgtcattgtttaaaattgcagtccactctgttatatc |
357 |
Q |
| |
|
| ||||||||||||||||||| | |||||||||| | |||||||||||||| |||||||||||||||| | |||| |||||||||||||||| || ||| |
|
|
| T |
135327 |
agggaagatattgataacttagacgcaaagcaggtaaaatattatcatttggtaagttccatatgtcactatttagaattgcagtccactcttttgcatc |
135426 |
T |
|
| Q |
358 |
tacctttgaa |
367 |
Q |
| |
|
|||||||||| |
|
|
| T |
135427 |
tacctttgaa |
135436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 145 - 367
Target Start/End: Original strand, 153570 - 153792
Alignment:
| Q |
145 |
ttgagaacaatcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggtagtcctttggaaaaattgaacaatatgcaaaacat |
244 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| ||||||||||||| |||| | |||||||| | ||||| ||||||||||| ||||| ||||||||| |
|
|
| T |
153570 |
ttgagaacgctctaggaagccttctgccatccataacaaaatcaattccttcttgtcaagtggaaaatccttcggaaaaattgagcaataggcaaaacat |
153669 |
T |
|
| Q |
245 |
cttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttgataagttccatatgtcattgtttaaaattgcagtcc |
344 |
Q |
| |
|
||||||||||| || ||||||||||||||||||| | |||||||||| | ||| ||||||||| |||||||||||||||| | |||| ||||||||||| |
|
|
| T |
153670 |
cttttcaaatgtgagggaagatattgataacttagacgcaaagcaggtaaaattgtatcatttggtaagttccatatgtcactatttagaattgcagtcc |
153769 |
T |
|
| Q |
345 |
actctgttatatctacctttgaa |
367 |
Q |
| |
|
||||| || ||||||||||||| |
|
|
| T |
153770 |
actcttttgcatctacctttgaa |
153792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 158 - 367
Target Start/End: Original strand, 145278 - 145487
Alignment:
| Q |
158 |
aggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaatgag |
257 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||| |||| | |||||||| | ||||| ||||||||||| ||||| |||||||||||||||||||| | |
|
|
| T |
145278 |
aggaagccttctgccatccataacaaaatcaattccttcttgtcaagtggaaaatccttcggaaaaattgagcaataggcaaaacatcttttcaaatgtg |
145377 |
T |
|
| Q |
258 |
atggaagatattgataacttaaatgcaaagcaggaagaatattatcatttgataagttccatatgtcattgtttaaaattgcagtccactctgttatatc |
357 |
Q |
| |
|
| ||||||||||||||||||| | |||||||||| | ||| ||||||||| |||||||||||||||| | |||| |||||||||||||||| || ||| |
|
|
| T |
145378 |
agggaagatattgataacttagacgcaaagcaggtaaaattgtatcatttggtaagttccatatgtcactatttagaattgcagtccactcttttgcatc |
145477 |
T |
|
| Q |
358 |
tacctttgaa |
367 |
Q |
| |
|
|||||||||| |
|
|
| T |
145478 |
tacctttgaa |
145487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 135086 - 135172
Alignment:
| Q |
14 |
gctaaatcatttacaaggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattca |
103 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||||| | |||||||| || ||||||||||||| | || |||||||||||| |
|
|
| T |
135086 |
gctaaatcattgacaaggtcatgcataacaaatttttcttttc---catcatcatttgattgttgaattaagcacctggataacaattca |
135172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 155 - 347
Target Start/End: Complemental strand, 29837373 - 29837181
Alignment:
| Q |
155 |
tcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaat |
254 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||| ||||||||||||| | || ||||||||||||||||||||||| || |||||||||||||| | |
|
|
| T |
29837373 |
tcaatgaatccttctgccatccacaacaaaaccaattgcttcctatcaagttgataatcctttggaaaaattgaacaataggcgaaacatcttttcaagt |
29837274 |
T |
|
| Q |
255 |
gagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttgataagttccatatgtcattgtttaaaattgcagtccact |
347 |
Q |
| |
|
|| | ||||||| ||||||||| |||||||| ||||| | | ||||||||||||||||||||||||||| | || | ||||||| |||||| |
|
|
| T |
29837273 |
gacaaggaagatcttgataactcaaatgcaatgcaggcatgactttatcatttgataagttccatatgtcactattcagaattgcattccact |
29837181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 29837498 - 29837420
Alignment:
| Q |
30 |
ggtcatgcataacaaacttttctccacgagcatcatcacttaattgttgaattaacgatctcgataacaattcagcaaa |
108 |
Q |
| |
|
|||||||||| ||||| ||||||||| || ||||||| | |||||||||||| ||||| |||| |||||||||||| |
|
|
| T |
29837498 |
ggtcatgcatgacaaatttttctccatcagtatcatcatatgcttgttgaattaaggatctagatatcaattcagcaaa |
29837420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 826635 - 826467
Alignment:
| Q |
155 |
tcaaggaatccttctgccatccacaacaaaatcaatttcttcctatcaagtgggtagtcctttggaaaaattgaacaatatgcaaaacatcttttcaaat |
254 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||| | ||| | ||||| || || |||| ||||||||||| ||||| | |||||||||||||||| |
|
|
| T |
826635 |
tcaaggaagccttctgccatccacaacaaaaccaaatgctttttttcaaggggataacccttgggaaaaattgagcaatagacgaaacatcttttcaaat |
826536 |
T |
|
| Q |
255 |
gagatggaagatattgataacttaaatgcaaagcaggaagaatattatcatttgataagttccatatgt |
323 |
Q |
| |
|
|||| ||||| ||| ||||||| ||| |||||||||| ||||| |||| ||||| || ||||||||||| |
|
|
| T |
826535 |
gagagggaaggtatagataactcaaaagcaaagcaggcagaatgttattatttggtatgttccatatgt |
826467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 18085856 - 18085770
Alignment:
| Q |
215 |
tttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgataacttaaatgcaaagcaggaagaatatta |
301 |
Q |
| |
|
||||| ||||||| |||||| ||||||||||| || |||||||| || ||||| || || ||||| |||||| |||||||||||| |
|
|
| T |
18085856 |
tttgggaaaattgcacaataagcaaaacatctctttaaatgagaagggagataatggtagcttaacctcaaagctggaagaatatta |
18085770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0267 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0267
Description:
Target: scaffold0267; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 19139 - 19080
Alignment:
| Q |
214 |
ctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattgata |
273 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||| ||| ||| |||||||| ||||| |
|
|
| T |
19139 |
ctttggaaaaattgaacagtaagcaaaacatctttttaaaggagccggaagataatgata |
19080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0603 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0603
Description:
Target: scaffold0603; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 4488 - 4544
Alignment:
| Q |
214 |
ctttggaaaaattgaacaatatgcaaaacatcttttcaaatgagatggaagatattg |
270 |
Q |
| |
|
||||||||||||||||||||| |||| |||| ||| ||| ||| |||||||||||| |
|
|
| T |
4488 |
ctttggaaaaattgaacaatactcaaagcatcgttttaaaggagttggaagatattg |
4544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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