View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20618_high_105 (Length: 204)
Name: NF20618_high_105
Description: NF20618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20618_high_105 |
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Alignment Details
Target: chr6 (Bit Score: 179; Significance: 8e-97; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 179; E-Value: 8e-97
Query Start/End: Original strand, 6 - 188
Target Start/End: Complemental strand, 34954601 - 34954419
Alignment:
| Q |
6 |
aatattaaattaaaatcatgactttattaacattttttctaagacaaatttgattgctattacttgaaatatttcacttggtatatgcatggtggaatta |
105 |
Q |
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| T |
34954601 |
aatattaaattaaaatcatgactttattaacattttttctgagacaaatttgattgctattacttgaaatatttcacttggtatatgcatggtggaatta |
34954502 |
T |
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| Q |
106 |
ttattttttctagcataaattataagttaatttattttgaaataagaagaattctatgaatggcactccaaccctcaaaatat |
188 |
Q |
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| T |
34954501 |
ttattttttctagcataaattataagttaatttattttgaaataagaagaattctatgaatggcactccaaccctcaaaatat |
34954419 |
T |
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