View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20618_high_18 (Length: 533)

Name: NF20618_high_18
Description: NF20618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20618_high_18
NF20618_high_18
[»] chr2 (56 HSPs)
chr2 (247-422)||(9444875-9445050)
chr2 (18-234)||(9450324-9450540)
chr2 (414-533)||(9444560-9444679)
chr2 (123-234)||(20566017-20566128)
chr2 (123-233)||(23932633-23932743)
chr2 (122-234)||(27665043-27665154)
chr2 (122-230)||(35729188-35729296)
chr2 (158-233)||(2544245-2544320)
chr2 (125-234)||(15411624-15411733)
chr2 (125-234)||(19228493-19228601)
chr2 (122-234)||(4821344-4821455)
chr2 (122-234)||(16126558-16126669)
chr2 (122-230)||(24729576-24729684)
chr2 (122-234)||(38248419-38248531)
chr2 (122-234)||(43806427-43806539)
chr2 (123-234)||(16919154-16919264)
chr2 (124-234)||(8770887-8770996)
chr2 (140-234)||(37471757-37471851)
chr2 (125-234)||(14377492-14377600)
chr2 (123-228)||(15231904-15232009)
chr2 (122-234)||(5583557-5583669)
chr2 (122-234)||(7757785-7757897)
chr2 (123-234)||(5853463-5853574)
chr2 (123-234)||(16493532-16493643)
chr2 (123-230)||(45062269-45062376)
chr2 (122-224)||(4576325-4576427)
chr2 (122-212)||(29157828-29157918)
chr2 (169-234)||(34817610-34817676)
chr2 (140-234)||(40562094-40562188)
chr2 (152-233)||(11660948-11661029)
chr2 (124-212)||(3951339-3951427)
chr2 (124-212)||(8847876-8847964)
chr2 (122-234)||(9747384-9747496)
chr2 (122-234)||(12016734-12016845)
chr2 (124-231)||(12919351-12919458)
chr2 (123-234)||(22704604-22704715)
chr2 (152-227)||(39607437-39607512)
chr2 (124-219)||(43941855-43941950)
chr2 (168-230)||(45302411-45302473)
chr2 (152-233)||(2579987-2580068)
chr2 (124-212)||(3286584-3286672)
chr2 (176-233)||(25068527-25068588)
chr2 (122-234)||(29142141-29142253)
chr2 (182-234)||(29981282-29981334)
chr2 (123-206)||(9895107-9895190)
chr2 (125-208)||(26003348-26003431)
chr2 (122-197)||(43388480-43388555)
chr2 (180-234)||(2051681-2051735)
chr2 (125-234)||(2060044-2060153)
chr2 (122-167)||(6109523-6109568)
chr2 (124-209)||(16123370-16123455)
chr2 (137-234)||(22705522-22705618)
chr2 (122-219)||(36731262-36731359)
chr2 (122-166)||(8065258-8065302)
chr2 (138-234)||(13351226-13351321)
chr2 (194-234)||(25948106-25948146)
[»] scaffold0073 (1 HSPs)
scaffold0073 (122-234)||(16534-16645)
[»] chr7 (49 HSPs)
chr7 (122-234)||(7040251-7040362)
chr7 (122-234)||(23982754-23982866)
chr7 (122-234)||(19889408-19889519)
chr7 (122-234)||(33343055-33343167)
chr7 (124-234)||(3530115-3530225)
chr7 (140-234)||(47707901-47707995)
chr7 (123-224)||(26300648-26300749)
chr7 (122-230)||(4969844-4969952)
chr7 (122-234)||(5909281-5909392)
chr7 (122-234)||(7170069-7170181)
chr7 (122-230)||(8091311-8091419)
chr7 (122-234)||(9332029-9332140)
chr7 (122-234)||(34270328-34270440)
chr7 (122-234)||(46290077-46290189)
chr7 (124-231)||(7899487-7899594)
chr7 (123-234)||(25709399-25709510)
chr7 (122-224)||(32117891-32117993)
chr7 (170-231)||(2276745-2276806)
chr7 (174-231)||(19868184-19868241)
chr7 (164-233)||(36991041-36991110)
chr7 (122-234)||(12085930-12086041)
chr7 (139-231)||(12624707-12624798)
chr7 (174-230)||(47200984-47201039)
chr7 (122-209)||(3561877-3561964)
chr7 (125-172)||(42750412-42750459)
chr7 (123-234)||(45501526-45501637)
chr7 (124-232)||(5833424-5833532)
chr7 (174-234)||(11680069-11680129)
chr7 (122-234)||(39757109-39757220)
chr7 (124-219)||(28061324-28061419)
chr7 (122-233)||(6587853-6587965)
chr7 (122-231)||(8420832-8420941)
chr7 (125-222)||(41331458-41331555)
chr7 (122-226)||(22041725-22041829)
chr7 (122-230)||(33072052-33072160)
chr7 (122-234)||(36548459-36548570)
chr7 (124-212)||(38798071-38798159)
chr7 (124-212)||(42593395-42593483)
chr7 (124-212)||(45645456-45645544)
chr7 (123-234)||(384431-384540)
chr7 (123-210)||(29398134-29398221)
chr7 (122-233)||(47457460-47457571)
chr7 (125-234)||(18102232-18102341)
chr7 (125-191)||(26037203-26037269)
chr7 (185-235)||(27696742-27696792)
chr7 (163-212)||(38798248-38798297)
chr7 (193-234)||(41572286-41572327)
chr7 (188-233)||(46185374-46185419)
chr7 (122-166)||(820540-820584)
[»] chr1 (50 HSPs)
chr1 (122-234)||(6307570-6307681)
chr1 (122-234)||(36490846-36490958)
chr1 (122-224)||(4249282-4249385)
chr1 (122-223)||(4249607-4249709)
chr1 (122-223)||(4249931-4250033)
chr1 (124-230)||(13241828-13241934)
chr1 (122-234)||(23576413-23576525)
chr1 (122-234)||(41624896-41625008)
chr1 (124-231)||(9516651-9516758)
chr1 (140-234)||(49392150-49392242)
chr1 (122-234)||(3168067-3168180)
chr1 (122-234)||(6754538-6754650)
chr1 (122-234)||(13321943-13322055)
chr1 (122-234)||(38812807-38812919)
chr1 (122-234)||(39150326-39150437)
chr1 (123-226)||(5057077-5057180)
chr1 (124-231)||(35438785-35438892)
chr1 (123-234)||(51920431-51920542)
chr1 (122-228)||(30171952-30172058)
chr1 (122-228)||(30187493-30187599)
chr1 (152-233)||(52337834-52337915)
chr1 (122-234)||(313817-313928)
chr1 (122-234)||(1502719-1502831)
chr1 (122-230)||(6180257-6180365)
chr1 (122-234)||(6569984-6570095)
chr1 (122-234)||(17919521-17919632)
chr1 (122-234)||(22167402-22167514)
chr1 (122-234)||(30362994-30363106)
chr1 (123-230)||(23591769-23591876)
chr1 (175-234)||(26978115-26978174)
chr1 (123-230)||(29635748-29635855)
chr1 (122-228)||(34802041-34802146)
chr1 (125-234)||(32543052-32543161)
chr1 (174-230)||(50467436-50467493)
chr1 (122-234)||(25465225-25465337)
chr1 (122-234)||(30288863-30288974)
chr1 (175-234)||(34050335-34050394)
chr1 (140-222)||(24669006-24669088)
chr1 (124-221)||(43909273-43909368)
chr1 (137-234)||(8062272-8062368)
chr1 (43-104)||(30237087-30237148)
chr1 (188-233)||(33048177-33048222)
chr1 (122-234)||(35512792-35512904)
chr1 (122-234)||(39310785-39310897)
chr1 (124-212)||(42589261-42589349)
chr1 (124-212)||(44013014-44013102)
chr1 (123-227)||(47990046-47990148)
chr1 (175-230)||(10096731-10096786)
chr1 (201-234)||(6520778-6520811)
chr1 (122-234)||(44918092-44918203)
[»] chr4 (61 HSPs)
chr4 (122-234)||(27019327-27019439)
chr4 (124-234)||(55813931-55814041)
chr4 (123-234)||(2096938-2097049)
chr4 (124-224)||(49250336-49250437)
chr4 (122-234)||(16069206-16069318)
chr4 (122-234)||(19468261-19468373)
chr4 (122-234)||(49181139-49181251)
chr4 (122-234)||(50352369-50352481)
chr4 (124-231)||(51070399-51070504)
chr4 (122-218)||(4329677-4329773)
chr4 (122-234)||(17409891-17410003)
chr4 (122-234)||(19450899-19451011)
chr4 (122-234)||(34941345-34941457)
chr4 (122-234)||(41415556-41415667)
chr4 (123-234)||(23545543-23545654)
chr4 (175-234)||(38222353-38222412)
chr4 (124-234)||(16667385-16667495)
chr4 (122-232)||(23051381-23051490)
chr4 (124-234)||(52391365-52391475)
chr4 (188-233)||(33559269-33559314)
chr4 (123-228)||(47326892-47326997)
chr4 (123-228)||(47341688-47341793)
chr4 (122-234)||(53376407-53376520)
chr4 (126-234)||(24684904-24685012)
chr4 (122-234)||(33632202-33632313)
chr4 (122-234)||(40049625-40049737)
chr4 (124-172)||(48910803-48910851)
chr4 (122-230)||(51691412-51691520)
chr4 (123-234)||(4779436-4779547)
chr4 (122-224)||(27756638-27756740)
chr4 (122-228)||(54495636-54495742)
chr4 (122-234)||(7349756-7349867)
chr4 (122-234)||(9759141-9759253)
chr4 (158-234)||(33288275-33288351)
chr4 (122-234)||(39876897-39877009)
chr4 (124-212)||(41887570-41887658)
chr4 (122-209)||(29190815-29190902)
chr4 (123-233)||(10658417-10658527)
chr4 (122-172)||(10813493-10813543)
chr4 (123-233)||(10872562-10872672)
chr4 (122-208)||(18882266-18882352)
chr4 (124-234)||(23553638-23553747)
chr4 (122-228)||(27362464-27362570)
chr4 (122-172)||(35999946-35999996)
chr4 (188-230)||(39796184-39796226)
chr4 (123-209)||(53961414-53961500)
chr4 (168-234)||(54506463-54506529)
chr4 (137-234)||(37432880-37432977)
chr4 (124-212)||(32459419-32459507)
chr4 (184-231)||(6875571-6875618)
chr4 (123-234)||(19838691-19838802)
chr4 (194-233)||(35645072-35645111)
chr4 (191-226)||(46607565-46607600)
chr4 (122-213)||(25843380-25843473)
chr4 (175-213)||(25938942-25938980)
chr4 (153-230)||(41970454-41970531)
chr4 (163-212)||(43759507-43759556)
chr4 (161-230)||(44571567-44571636)
chr4 (123-231)||(1378088-1378195)
chr4 (122-198)||(49228757-49228833)
chr4 (175-234)||(51268667-51268729)
[»] scaffold0305 (2 HSPs)
scaffold0305 (123-234)||(17996-18107)
scaffold0305 (123-233)||(17788-17898)
[»] chr5 (40 HSPs)
chr5 (123-234)||(15240950-15241061)
chr5 (122-234)||(2795591-2795702)
chr5 (122-234)||(6863623-6863735)
chr5 (122-234)||(11636799-11636910)
chr5 (122-230)||(35151290-35151398)
chr5 (122-230)||(3398291-3398399)
chr5 (122-234)||(8103579-8103691)
chr5 (122-234)||(18841704-18841816)
chr5 (122-234)||(30839848-30839960)
chr5 (122-234)||(36597646-36597758)
chr5 (123-234)||(40166349-40166459)
chr5 (124-234)||(16174623-16174732)
chr5 (123-224)||(32019984-32020086)
chr5 (124-234)||(41350270-41350379)
chr5 (125-230)||(31567493-31567598)
chr5 (122-209)||(4047504-4047591)
chr5 (122-224)||(13515925-13516027)
chr5 (152-234)||(26265073-26265155)
chr5 (123-212)||(23995416-23995505)
chr5 (123-219)||(35469636-35469732)
chr5 (125-234)||(3737874-3737987)
chr5 (123-230)||(15837346-15837453)
chr5 (124-234)||(28629946-28630056)
chr5 (123-234)||(31365950-31366060)
chr5 (123-234)||(39990039-39990148)
chr5 (124-209)||(14466495-14466580)
chr5 (124-212)||(12332426-12332514)
chr5 (124-212)||(31613150-31613238)
chr5 (124-212)||(31705018-31705106)
chr5 (124-212)||(40454150-40454238)
chr5 (126-234)||(40513018-40513126)
chr5 (152-231)||(18150484-18150563)
chr5 (174-233)||(38994126-38994184)
chr5 (161-234)||(7162910-7162981)
chr5 (123-209)||(12641993-12642079)
chr5 (162-212)||(13761759-13761809)
chr5 (140-233)||(15190941-15191034)
chr5 (131-229)||(36474637-36474734)
chr5 (161-230)||(10665003-10665072)
chr5 (162-234)||(11249996-11250068)
[»] chr3 (55 HSPs)
chr3 (123-234)||(46492343-46492454)
chr3 (124-230)||(7940863-7940969)
chr3 (126-234)||(23803049-23803157)
chr3 (123-234)||(13495361-13495472)
chr3 (122-234)||(2571335-2571447)
chr3 (122-234)||(10307833-10307945)
chr3 (181-233)||(26486435-26486487)
chr3 (124-234)||(51567821-51567928)
chr3 (127-234)||(11610982-11611088)
chr3 (124-231)||(23638050-23638157)
chr3 (164-230)||(14847041-14847107)
chr3 (122-228)||(38389520-38389626)
chr3 (122-234)||(51618117-51618226)
chr3 (123-232)||(13879808-13879916)
chr3 (124-233)||(37055367-37055476)
chr3 (122-209)||(3863421-3863508)
chr3 (122-209)||(16875024-16875111)
chr3 (123-233)||(20938125-20938235)
chr3 (123-234)||(33474473-33474584)
chr3 (123-234)||(35414809-35414920)
chr3 (123-234)||(38785947-38786058)
chr3 (122-233)||(45983574-45983685)
chr3 (122-233)||(50204471-50204582)
chr3 (46-104)||(43637370-43637428)
chr3 (162-232)||(54320720-54320789)
chr3 (122-234)||(12515473-12515585)
chr3 (175-231)||(23320140-23320196)
chr3 (122-234)||(29686388-29686499)
chr3 (122-209)||(23523038-23523125)
chr3 (125-222)||(9247817-9247912)
chr3 (122-228)||(36426408-36426514)
chr3 (124-218)||(37332196-37332290)
chr3 (124-234)||(40497114-40497224)
chr3 (124-230)||(42180123-42180229)
chr3 (124-230)||(48517479-48517585)
chr3 (124-234)||(54527707-54527817)
chr3 (124-232)||(8497421-8497529)
chr3 (126-234)||(9711011-9711119)
chr3 (177-233)||(24657608-24657664)
chr3 (124-212)||(29932353-29932441)
chr3 (124-212)||(29981507-29981595)
chr3 (122-234)||(51401507-51401619)
chr3 (168-234)||(30472935-30473002)
chr3 (175-218)||(32321776-32321819)
chr3 (125-208)||(39364872-39364955)
chr3 (122-213)||(49396468-49396559)
chr3 (175-233)||(2379124-2379182)
chr3 (122-208)||(2566575-2566661)
chr3 (122-172)||(11611105-11611155)
chr3 (176-218)||(19346181-19346223)
chr3 (143-224)||(54026952-54027034)
chr3 (124-197)||(46845144-46845217)
chr3 (122-214)||(32553453-32553545)
chr3 (194-230)||(46492279-46492315)
chr3 (158-234)||(50364258-50364333)
[»] chr8 (65 HSPs)
chr8 (122-232)||(12132052-12132162)
chr8 (124-230)||(34741666-34741772)
chr8 (122-231)||(14961662-14961771)
chr8 (122-234)||(26682135-26682247)
chr8 (122-234)||(28014857-28014969)
chr8 (122-234)||(35678274-35678385)
chr8 (122-233)||(6818085-6818196)
chr8 (125-231)||(7393247-7393352)
chr8 (125-231)||(20514703-20514809)
chr8 (125-234)||(44091385-44091494)
chr8 (122-234)||(3306054-3306166)
chr8 (122-234)||(9801736-9801847)
chr8 (122-234)||(14816125-14816236)
chr8 (122-234)||(14829504-14829615)
chr8 (122-234)||(27874680-27874792)
chr8 (122-218)||(39701802-39701898)
chr8 (124-230)||(9022106-9022215)
chr8 (124-234)||(13327942-13328051)
chr8 (122-234)||(2161454-2161566)
chr8 (122-234)||(7140458-7140569)
chr8 (122-234)||(9580108-9580220)
chr8 (122-234)||(10129171-10129282)
chr8 (122-234)||(12189587-12189699)
chr8 (122-234)||(12434015-12434127)
chr8 (122-233)||(32089465-32089577)
chr8 (158-234)||(35583434-35583509)
chr8 (122-234)||(39024856-39024968)
chr8 (122-234)||(45006037-45006148)
chr8 (122-189)||(7977990-7978057)
chr8 (123-234)||(40225987-40226098)
chr8 (124-233)||(4080395-4080503)
chr8 (122-234)||(18567415-18567526)
chr8 (122-234)||(26363989-26364101)
chr8 (130-234)||(36967077-36967181)
chr8 (123-231)||(38212944-38213052)
chr8 (122-209)||(1203693-1203780)
chr8 (175-233)||(28869513-28869572)
chr8 (122-224)||(29642679-29642782)
chr8 (175-233)||(1844612-1844670)
chr8 (122-228)||(26834634-26834740)
chr8 (122-228)||(31812186-31812292)
chr8 (124-233)||(4084544-4084652)
chr8 (124-233)||(4102851-4102959)
chr8 (122-211)||(15198899-15198988)
chr8 (174-230)||(34249748-34249805)
chr8 (124-212)||(42195-42283)
chr8 (138-218)||(297178-297258)
chr8 (122-233)||(8284567-8284679)
chr8 (124-212)||(10543630-10543718)
chr8 (122-234)||(38843771-38843883)
chr8 (124-212)||(42781563-42781651)
chr8 (123-234)||(16445736-16445846)
chr8 (123-211)||(26195259-26195349)
chr8 (124-182)||(28866932-28866990)
chr8 (124-166)||(32186321-32186363)
chr8 (124-166)||(34107171-34107213)
chr8 (122-234)||(5573355-5573465)
chr8 (122-191)||(19343835-19343904)
chr8 (153-198)||(28869376-28869421)
chr8 (181-230)||(31133907-31133955)
chr8 (161-234)||(44222473-44222545)
chr8 (158-234)||(9743929-9744004)
chr8 (123-171)||(13496709-13496757)
chr8 (124-212)||(16586723-16586811)
chr8 (175-231)||(38047989-38048045)
[»] chr6 (36 HSPs)
chr6 (162-230)||(31039775-31039843)
chr6 (123-228)||(10887102-10887207)
chr6 (124-234)||(6016923-6017033)
chr6 (124-224)||(31503818-31503919)
chr6 (122-234)||(14228125-14228237)
chr6 (122-234)||(17552586-17552698)
chr6 (122-234)||(28943768-28943880)
chr6 (122-234)||(31568177-31568288)
chr6 (122-230)||(34692425-34692533)
chr6 (152-234)||(1017807-1017889)
chr6 (124-234)||(8977467-8977577)
chr6 (123-232)||(30591163-30591272)
chr6 (122-234)||(17596408-17596520)
chr6 (122-230)||(29863301-29863409)
chr6 (122-230)||(31169762-31169870)
chr6 (131-224)||(17154700-17154793)
chr6 (125-230)||(23936378-23936483)
chr6 (122-230)||(29065424-29065531)
chr6 (122-230)||(29120277-29120384)
chr6 (122-234)||(33017791-33017903)
chr6 (123-226)||(27819627-27819730)
chr6 (147-234)||(30623393-30623480)
chr6 (122-228)||(18332687-18332793)
chr6 (124-234)||(31069583-31069692)
chr6 (158-234)||(16540671-16540747)
chr6 (124-208)||(31790917-31791001)
chr6 (124-212)||(34733702-34733790)
chr6 (123-230)||(29074438-29074544)
chr6 (123-230)||(29079202-29079308)
chr6 (123-230)||(29107011-29107117)
chr6 (122-172)||(3853072-3853122)
chr6 (125-234)||(17141342-17141451)
chr6 (160-221)||(31029462-31029523)
chr6 (41-105)||(2915630-2915693)
chr6 (409-457)||(10753901-10753949)
chr6 (194-234)||(18247774-18247814)
[»] scaffold0061 (1 HSPs)
scaffold0061 (122-234)||(52778-52889)
[»] scaffold0017 (1 HSPs)
scaffold0017 (122-234)||(145745-145856)
[»] scaffold0618 (1 HSPs)
scaffold0618 (125-234)||(8416-8525)
[»] scaffold0036 (1 HSPs)
scaffold0036 (123-230)||(94018-94125)
[»] scaffold0018 (1 HSPs)
scaffold0018 (122-233)||(182112-182221)
[»] scaffold0111 (2 HSPs)
scaffold0111 (122-228)||(37113-37219)
scaffold0111 (123-198)||(41085-41160)
[»] scaffold0192 (1 HSPs)
scaffold0192 (124-196)||(13564-13636)
[»] scaffold0727 (1 HSPs)
scaffold0727 (124-234)||(5759-5868)
[»] scaffold0128 (1 HSPs)
scaffold0128 (122-215)||(44293-44386)
[»] scaffold0155 (1 HSPs)
scaffold0155 (122-234)||(3412-3523)
[»] scaffold0011 (1 HSPs)
scaffold0011 (122-209)||(13177-13264)
[»] scaffold0032 (1 HSPs)
scaffold0032 (43-97)||(46839-46892)
[»] scaffold0074 (1 HSPs)
scaffold0074 (123-208)||(45497-45582)
[»] scaffold0009 (1 HSPs)
scaffold0009 (188-229)||(191379-191419)


Alignment Details
Target: chr2 (Bit Score: 156; Significance: 1e-82; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 247 - 422
Target Start/End: Complemental strand, 9445050 - 9444875
Alignment:
Q  247 ggttatagagcacattttgagagagagaaaattttagaaaatccatcgaatttgttagtaatgatgttgaagttgttaaaaattcacttgaaccgtaaat 346  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  9445050 ggttacagagcacattttgagagagagaaaattttagaaaattcatcgaatttgttagtaatgatgttgaagttgttaacaattcacttgaactgtaaat 9444951  T
Q  347 aaaatctgacaattgattattctagcaagagaatttgaacttggttcttttaaactaaattatttgtctcaaatta 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9444950 aaaatctgacaattgattattctagcaagagaatttgaacttggttctttttaactaaattatttgtctcaaatta 9444875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 9450540 - 9450324
Alignment:
Q  18 catatgacccttactatccacctacctaacactctctttcatatagggtgaacttactaaaatgtcatttcaaatagggtgtataataggggtagnnnnn 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||         
T  9450540 catatgacccttactatccacctacctaacactctctttcatataggatgaacttactaaaatgtcatttcaaataggatgtataataggggtaggaaaa 9450441  T
Q  118 nnnnggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataatttt 217  Q
        |||||||||||||| ||||||| |||| | ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  9450440 aaagggtttttctatcatgtgcaaatctgcacatgttaagaaatttaaagtagtatgtttgtattggaatttgtgtattttctattaaatatataatttt 9450341  T
Q  218 ttaataaataattgttg 234  Q
    |||||||||||||||||    
T  9450340 ttaataaataattgttg 9450324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 414 - 533
Target Start/End: Complemental strand, 9444679 - 9444560
Alignment:
Q  414 ctcaaattataacccactttgaaaattttacacaaattaagaaaaataattaatcttgtttgaaaaagagatactgcaaattaatattttataaaattat 513  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9444679 ctcaaattataatccactttgaaaattttacacaaattaagaaaaatagttaattttgtttgaaaaagagatactgcaaattaatattttataaaattat 9444580  T
Q  514 cattcatcaataatataata 533  Q
    ||||||||||||||||||||    
T  9444579 cattcatcaataatataata 9444560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 20566017 - 20566128
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| ||||||||| || | ||||| |||||||||||| ||||||||||||| |||||||||||||| ||||||||| ||||| |||||||    
T  20566017 gtttttctatcatgtgcaaatttacacatgttaagaagtttaaagtattatgtttgtattggaacttgtgtattttttattaaatagataatattttaat 20566116  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  20566117 aaataattgttg 20566128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 23932743 - 23932633
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| ||||||||||||||  |||| ||||||||| |||||   |||||| | |||||||| ||||| |||||| |||| || ||||||||    
T  23932743 gtttttctatcatgtgcaaatttgcatatattaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataaaactttttaat 23932644  T
Q  223 aaataattgtt 233  Q
    |||||||||||    
T  23932643 aaataattgtt 23932633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 27665043 - 27665154
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| |||||||||||||||  ||||  ||| ||||||||| |||| |||||||||| |||  ||||||    
T  27665043 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaa-cttttaa 27665141  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  27665142 taaataattgttg 27665154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 35729296 - 35729188
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||| ||| | |||||||||| | ||| | ||||||||||||| |  ||| ||||| |||||||||||||| || ||||||||||| |||||||    
T  35729296 ggtttttctaacatgtacaaatttgcacatgttgagaagtttaaagtagcaaatttatattggaacttgtgtattttatagtaaatatataaatttttaa 35729197  T
Q  222 taaataatt 230  Q
    |||||||||    
T  35729196 taaataatt 35729188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 2544245 - 2544320
Alignment:
Q  158 aagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgtt 233  Q
    ||||| ||| ||||| ||||||||| ||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  2544245 aagttcaaaatagtaagtttgtattaaaacttgtgtattttatatttaatgtataattttttaataaataattgtt 2544320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 15411624 - 15411733
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataa 224  Q
    ||||||| ||| |||||||||||| | ||||| ||||||||| |||||  ||||| |||||||||||  ||||| |||||||||| ||  ||||||||||    
T  15411624 ttttctaacatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgtagctttttaataa 15411723  T
Q  225 ataattgttg 234  Q
    || |||||||    
T  15411724 attattgttg 15411733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 19228601 - 19228493
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataa 224  Q
    ||||||||||| |||||||||||| | ||||| |||||||||||||||  ||||  ||| ||||||||| |||| |||||||||| |||  ||||||| |    
T  19228601 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaa-cttttaatca 19228503  T
Q  225 ataattgttg 234  Q
    ||||||||||    
T  19228502 ataattgttg 19228493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 4821455 - 4821344
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||||||| || |||||||||||| | | ||| |||||||||||||||  ||||  ||||||||||||| |||| |||||||||| | |  ||||||    
T  4821455 ggtttttctattatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgatttgaaacttgtgttttttatattaaatatgt-agcttttaa 4821357  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  4821356 taaataattgttg 4821344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 16126558 - 16126669
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||||||||  |||   ||||||||||||| |||| |||||||||| | |  ||||||    
T  16126558 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgt-agcttttaa 16126656  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  16126657 tcaataattgttg 16126669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 230
Target Start/End: Original strand, 24729576 - 24729684
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  |||| |||| || |||| |||||| |||||| || |||| |||||||    
T  24729576 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgtatattttgtattaattacataactttttaa 24729675  T
Q  222 taaataatt 230  Q
    |||||||||    
T  24729676 taaataatt 24729684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 38248419 - 38248531
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  |||  |||| ||||||   ||||| ||||||||||||||||||||      
T  38248419 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattttacattggaacttgaacattttgtattaaatatataattttttgt 38248518  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  38248519 taaataattgttg 38248531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 43806539 - 43806427
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||| | || ||||||||| | ||||| ||||||||| ||| |  |||||||||||||||||  ||||  ||||||||||| || |||| ||    
T  43806539 ggtttttctatcgtgtgtaaatttgcacatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttgaa 43806440  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  43806439 taaataattgttg 43806427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 16919154 - 16919264
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    |||| |||||||| |||||||||||| |  |||| |||||||||||||||  ||||  ||||||||||||| |||| |||||||||| |||  |||||||    
T  16919154 gtttatctatcatgtgcaaatttgcacatattaacaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtaa-cttttaat 16919252  T
Q  223 aaataattgttg 234  Q
     |||||||||||    
T  16919253 caataattgttg 16919264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 8770887 - 8770996
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    ||||| |||||| |||||||||||| | ||||| |||||||||||||||  ||||  |||||| || ||| |||| |||||||||| |||  ||||||||    
T  8770887 tttttttatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttgacttgaaatttttgttttttatattaaatatgtaa-cttttaata 8770985  T
Q  224 aataattgttg 234  Q
    |||||||||||    
T  8770986 aataattgttg 8770996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 37471757 - 37471851
Alignment:
Q  140 aaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    ||||||||| | ||||| ||||||||| |||||  ||||| |||||||||||  ||||| |||||||||| || ||||||||||||| |||||||    
T  37471757 aaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgtagttttttaataaattattgttg 37471851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 14377600 - 14377492
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataa 224  Q
    ||||||||||| |||||||||| | | | ||| |||||||||||||||  ||||  ||||||||||||| |||| |||||||||| |||  |||||| ||    
T  14377600 ttttctatcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtaa-cttttaacaa 14377502  T
Q  225 ataattgttg 234  Q
    ||||||||||    
T  14377501 ataattgttg 14377492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 15232009 - 15231904
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    |||||||||| || |||||||||||| | ||||| ||||||||||| |||  ||||  || ||||||||| ||||  |||||||||| ||| ||||||||    
T  15232009 gtttttctattatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttaaaacttgtgcatttcatattaaatatgtaactttttaat 15231910  T
Q  223 aaataa 228  Q
    ||||||    
T  15231909 aaataa 15231904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 5583557 - 5583669
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||||||||||  ||||||||||| | ||||| || |||||| |||||  |||| |||| ||||||   ||||| |||||||||||||| |||||      
T  5583557 ggtttttctatcatgcgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgt 5583656  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  5583657 taaataattgttg 5583669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 7757785 - 7757897
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| ||||||||| || | ||||| || |||||| |||||  |||| |||| ||||||   ||||| |||||||||||||| |||||      
T  7757785 ggtttttctatcatgtgcaaatttacacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgt 7757884  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  7757885 taaataattgttg 7757897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 5853463 - 5853574
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| | ||||| ||||||| | | | |  |||| ||||||| || |  ||||| || |||||||||||||||| |||    
T  5853463 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaat 5853562  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  5853563 aaataattgttg 5853574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 16493532 - 16493643
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| | ||||| ||||||| | | | |  |||| ||||||| || |  ||||| || |||||||||||||||| |||    
T  16493532 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaat 16493631  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  16493632 aaataattgttg 16493643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 45062376 - 45062269
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| |  |||| ||||| ||| |||||  ||| | ||| |||||||| ||||| ||||||| || ||| ||||||||    
T  45062376 gtttttctatcatgtgcaaatttgcacatattaagaagttcaaaatagtaactttattttggaacttgtgcattttatattaaacatgtaactttttaat 45062277  T
Q  223 aaataatt 230  Q
    ||||||||    
T  45062276 aaataatt 45062269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 4576325 - 4576427
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||| ||||| ||||| || |||||| ||| |  |||||||||||||||||  ||||  ||||||||||| || |||| ||    
T  4576325 ggtttttctatcatgtgcaaattcgcatatgttaagaaatttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttaaa 4576424  T
Q  222 taa 224  Q
    |||    
T  4576425 taa 4576427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 122 - 212
Target Start/End: Original strand, 29157828 - 29157918
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||||||||| |||||||||||| | ||||| || ||| || |||||  |||| |||| ||||||| |||||| |||||||||||||    
T  29157828 ggtttttctatcatgtgcaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgtattaaatatata 29157918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 34817676 - 34817610
Alignment:
Q  169 agtatgtttgtattgaaacttgtg-tattttctattaaatatataattttttaataaataattgttg 234  Q
    |||||||| |||||| |||||||| | |||| |||||||||||||| ||||||||||||||||||||    
T  34817676 agtatgttggtattggaacttgtgcttttttttattaaatatataactttttaataaataattgttg 34817610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 40562094 - 40562188
Alignment:
Q  140 aaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    ||||||||| | ||||| ||||||||| || ||  |||| |||||||||| | |||||| |||| ||||||||| | ||||||||||||||||||    
T  40562094 aaatttgcacatgttaaaaagtttaaaatattaactttgcattgaaacttttatattttgtatttaatatataactctttaataaataattgttg 40562188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 11660948 - 11661029
Alignment:
Q  152 gttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgtt 233  Q
    ||||| |||||| || |||||  |||| |||| ||||||| |||||| |||||||| ||||| |||||||||||||||||||    
T  11660948 gttaagaagttttaaatagtaactttgcattggaacttgtatattttgtattaaatgtataactttttaataaataattgtt 11661029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 3951427 - 3951339
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||||||||||||||||||  ||||||||||||    
T  3951427 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattttacattaaatatata 3951339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 8847964 - 8847876
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||||||||||||||||||  ||||||||||||    
T  8847964 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattttacattaaatatata 8847876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 9747496 - 9747384
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| ||||||||| || | ||||| ||||||||| |||||  ||||| ||| |||||||  ||||| |||||||||| ||  ||||| |    
T  9747496 ggtttttctatcatgtgcaaattttcacatgttaagaagtttaaaatagtaattttgtcttggaacttgttcattttatattaaatatgtagctttttta 9747397  T
Q  222 taaataattgttg 234  Q
     ||||| ||||||    
T  9747396 caaatagttgttg 9747384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 12016845 - 12016734
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| |  |||| |||||||||||||||  |||   ||| ||||||||| |||| |||||||||| | |  ||||||    
T  12016845 ggtttttctatcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgt-agcttttaa 12016747  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  12016746 tcaataattgttg 12016734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 12919351 - 12919458
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    ||||| |||||| ||||||||| || | ||||| || |||||| |||||  ||| | |||||||||||  ||||| |||||||||| || ||||||||||    
T  12919351 tttttttatcatgtgcaaatttacacatgttaaaaaatttaaaatagtaactttatcttgaaacttgttcattttatattaaatatgtagttttttaata 12919450  T
Q  224 aataattg 231  Q
    ||| ||||    
T  12919451 aattattg 12919458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 22704715 - 22704604
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| |  |||| ||||||| | | | |  |||| ||||||| || |  ||||| || |||||||||||||||| |||    
T  22704715 gtttttctatcatgtgcaaatttgcacatcttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaat 22704616  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  22704615 aaataattgttg 22704604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 39607437 - 39607512
Alignment:
Q  152 gttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaata 227  Q
    ||||| || |||||| || || |||||||||| || || |||||||  ||||||||||||||||||||||||||||    
T  39607437 gttaagaaatttaaaataataagtttgtattggaagttatgtatttcatattaaatatataattttttaataaata 39607512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 219
Target Start/End: Original strand, 43941855 - 43941950
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataatttttt 219  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  |||||||||||| ||||||    
T  43941855 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatatattttttt 43941950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 45302473 - 45302411
Alignment:
Q  168 tagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataatt 230  Q
    ||||| |||||||||  || || || ||||| |||||||||||||||||||||||||||||||    
T  45302473 tagtaagtttgtattagaatttatgcattttatattaaatatataattttttaataaataatt 45302411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 2579987 - 2580068
Alignment:
Q  152 gttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgtt 233  Q
    ||||| ||||| ||| ||||| ||||||||||||  |||| |||||| | ||||||||  |||||||||| |||||||||||    
T  2579987 gttaagaagttcaaactagtaagtttgtattgaattttgtatattttatgttaaatattgaattttttaacaaataattgtt 2580068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 3286672 - 3286584
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  3286672 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 3286584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 25068527 - 25068588
Alignment:
Q  176 ttgtattgaaacttgtgtattttctattaaa----tatataattttttaataaataattgtt 233  Q
    ||||||| ||| ||||||||||| |||||||    |||||||||||||||||||||||||||    
T  25068527 ttgtattaaaatttgtgtattttatattaaataaatatataattttttaataaataattgtt 25068588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 29142253 - 29142141
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| ||||||||| || | ||| | ||||||||  ||| |  ||||||||  |||||||  ||||  ||||||||||| ||||||| ||    
T  29142253 ggtttttctatcatgtgcaaatttacacatgtttagaagtttaatatagaaattttgtattttaacttgtacatttaatattaaatataaaatttttgaa 29142154  T
Q  222 taaataattgttg 234  Q
    ||| |||||||||    
T  29142153 taagtaattgttg 29142141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 29981282 - 29981334
Alignment:
Q  182 tgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    ||||||||||||||||  |||||||||| ||  ||||||||||||||||||||    
T  29981282 tgaaacttgtgtatttaatattaaatatgtatatttttaataaataattgttg 29981334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 206
Target Start/End: Complemental strand, 9895190 - 9895107
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaa 206  Q
    ||||||||||||||||||||||| || | ||||| ||||||||| || ||  ||| |||||||| || || ||||| |||||||    
T  9895190 gtttttctatcatatgcaaattttcaaatgttaagaagtttaaaataataaatttatattgaaatttatgcattttatattaaa 9895107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 26003348 - 26003431
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaata 208  Q
    ||||||||||| |||||||||||| | ||||| ||||||||| ||| |  |||||||||||| ||||  ||||  |||||||||    
T  26003348 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaatttgtacatttgatattaaata 26003431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 43388480 - 43388555
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattt 197  Q
    |||||||||||||| |||||||||||| | ||||| ||||| |||   ||||||||| |||| |||||||| ||||    
T  43388480 ggtttttctatcatgtgcaaatttgcacatgttaagaagttcaaaaaggtatgtttgcattggaacttgtgcattt 43388555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 2051735 - 2051681
Alignment:
Q  180 attgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    ||||| |||| | |||||| |||||||||| ||| ||||||||||||||||||||    
T  2051735 attgatacttatatattttatattaaatatttaaatttttaataaataattgttg 2051681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 2060044 - 2060153
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataa 224  Q
    |||||||| || ||||||||| || | ||||| || ||||||||||||  |||   ||| || |||||| |||| |||||||||| ||  | ||||||||    
T  2060044 ttttctatgatgtgcaaatttacacatgttaagaaatttaaagtagtaactttaacttggaatttgtgtcttttatattaaatatgtagctctttaataa 2060143  T
Q  225 ataattgttg 234  Q
    ||||||||||    
T  2060144 ataattgttg 2060153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 6109568 - 6109523
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaag 167  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||||    
T  6109568 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaag 6109523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 16123455 - 16123370
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatat 209  Q
    |||||||||||| |||||||||||| | | ||| ||||||||| |||||  ||||  | | ||||||||| |||| ||||||||||    
T  16123455 tttttctatcatgtgcaaatttgcacatgataagaagtttaaattagtaattttgattaggaacttgtgttttttatattaaatat 16123370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 22705618 - 22705522
Alignment:
Q  137 tgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    |||||||||||| |  |||| |||||||||||||||  |||   ||||||||||||| |||| |||||||||| |||  ||| ||| |||||||||||    
T  22705618 tgcaaatttgcacattttaagaagtttaaagtagtaattttaacttgaaacttgtgttttttatattaaatatgtaa-ctttaaattaataattgttg 22705522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 219
Target Start/End: Complemental strand, 36731359 - 36731262
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataatttttt 219  Q
    |||||||||||||| || |||||| || | ||||| || |||||| | |||  ||||| ||  |||||||||||| | ||||||||| ||||||||||    
T  36731359 ggtttttctatcatgtgtaaatttacacatgttaagaaatttaaaatggtaaatttgtcttagaacttgtgtattctatattaaatagataatttttt 36731262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 8065302 - 8065258
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaa 166  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||    
T  8065302 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 8065258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 13351226 - 13351321
Alignment:
Q  138 gcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    ||||||||||| | ||||| |||||||||||||||  ||||  ||  ||||||||| |||| |||| ||||| |||  ||||||| |||||||||||    
T  13351226 gcaaatttgcacatgttaagaagtttaaagtagtaactttgacttagaacttgtgttttttatatttaatatgtaa-cttttaattaataattgttg 13351321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 25948146 - 25948106
Alignment:
Q  194 attttctattaaatatataattttttaataaataattgttg 234  Q
    ||||| || |||||||||||||||| |||||||||||||||    
T  25948146 attttgtaataaatatataatttttaaataaataattgttg 25948106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 16534 - 16645
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||| |||||| |||||||||||| | ||||| |||||||||||| ||||||||  ||| ||||||||||||||||||| ||||||||| |||||||    
T  16534 ggtttttatatcatgtgcaaatttgcacatgttaagaagtttaaagtaatatgtttgatttggaacttgtgtattttctatt-aatatataaatttttaa 16632  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  16633 taaataattgttg 16645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 7040251 - 7040362
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||| |||||| |||||||||||| | ||||| |||||||||||| ||||||||  ||| ||||||||||||||||||| ||||||||| |||||||    
T  7040251 ggtttttatatcatgtgcaaatttgcacatgttaagaagtttaaagtactatgtttgatttggaacttgtgtattttctatt-aatatataaatttttaa 7040349  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  7040350 taaataattgttg 7040362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 23982754 - 23982866
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| ||||||| || ||||||||||||  ||||  ||| |||||||||||||| |||||||||| ||| |||||||    
T  23982754 ggtttttctatcatgtgcaaatttgcacacgttaagaaatttaaagtagtaactttgacttggaacttgtgtattttatattaaatatttaagtttttaa 23982853  T
Q  222 taaataattgttg 234  Q
    ||| |||||||||    
T  23982854 taattaattgttg 23982866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 19889519 - 19889408
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| |||||||||||||||  ||||  ||| ||||||||| |||| |||||||||| |||  ||||||    
T  19889519 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaa-cttttaa 19889421  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  19889420 taaataattgttg 19889408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 33343167 - 33343055
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  ||||||||| ||||||   ||||| |||||||||||||| |||||      
T  33343167 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgtattggaacttgaacattttgtattaaatatataactttttgt 33343068  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  33343067 taaataattgttg 33343055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 3530115 - 3530225
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    ||||| |||||| ||||||||| || |  |||| | ||||| | ||||| |||| |||||||| ||||| ||||| ||| ||||||||||||||||||||    
T  3530115 tttttatatcatgtgcaaatttacacatattaagacgtttagaatagtaagtttttattgaaatttgtgcattttatatcaaatatataattttttaata 3530214  T
Q  224 aataattgttg 234  Q
    |||||||||||    
T  3530215 aataattgttg 3530225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 47707901 - 47707995
Alignment:
Q  140 aaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    |||||| |||| ||||| ||||||||| |||||  |||| |||||||||| |  ||||| |||||||||||||| ||||||||||||||||||||    
T  47707901 aaattttcatatgttaagaagtttaaaatagtaattttgaattgaaacttatacattttgtattaaatatataactttttaataaataattgttg 47707995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 26300749 - 26300648
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||| ||||| | |||||||||| | ||||| ||||||||| |||||  |||| |||||||||||| |||||| |||||||| ||||| ||||||||    
T  26300749 gtttttccatcatgtacaaatttgcacatgttaaaaagtttaaaatagtaactttgaattgaaacttgtatattttgtattaaatgtataactttttaat 26300650  T
Q  223 aa 224  Q
    ||    
T  26300649 aa 26300648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 4969952 - 4969844
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| ||| |  ||||||||| |||||||  ||||  ||||||||||| || |||| ||    
T  4969952 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttaaa 4969853  T
Q  222 taaataatt 230  Q
    |||||||||    
T  4969852 taaataatt 4969844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 5909281 - 5909392
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| || ||||||||| | | ||| |||||||||||||||  ||||  ||||||||||||| |||| |||||||||| | |  ||||||    
T  5909281 ggtttttctatcatgtgtaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgt-agcttttaa 5909379  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  5909380 taaataattgttg 5909392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 7170181 - 7170069
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| |||||||||||||||  ||||  ||| |||||||| ||||| |||||| ||| ||  |||||||    
T  7170181 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaa 7170082  T
Q  222 taaataattgttg 234  Q
    ||| |||||||||    
T  7170081 taattaattgttg 7170069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 230
Target Start/End: Original strand, 8091311 - 8091419
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| ||||||||| || | ||||| ||||||||| |||||  |||| |||| ||||| |  ||||| | |||||||||||| |||||||    
T  8091311 ggtttttctatcatgtgcaaatttacacatgttaagaagtttaaaatagtaactttgcattgtaacttttacattttgtgttaaatatataactttttaa 8091410  T
Q  222 taaataatt 230  Q
    |||||||||    
T  8091411 taaataatt 8091419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 9332140 - 9332029
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| |||||  ||||  ||||||||||||| |||| |||||||||| |||   |||||    
T  9332140 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaa-catttaa 9332042  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  9332041 tcaataattgttg 9332029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 34270440 - 34270328
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  |||| |||| ||||||   ||||| |||||||||||||| |||||      
T  34270440 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgt 34270341  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  34270340 taaataattgttg 34270328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 46290189 - 46290077
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  |||| |||| ||||||   ||||| |||||||||||||| |||||      
T  46290189 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgt 46290090  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  46290089 taaataattgttg 46290077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 7899487 - 7899594
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| |||||||||||| | ||||| || |||||| | ||| |||||| ||  ||||||| |||||| ||||||||||||||  ||||||||    
T  7899487 tttttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatggtaagtttgtcttataacttgtatattttatattaaatatataacattttaata 7899586  T
Q  224 aataattg 231  Q
    ||| ||||    
T  7899587 aattattg 7899594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 25709399 - 25709510
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| | ||||| ||||||||| |||||  ||||||||| |||||||  ||||  |||||||||  ||  ||||||||    
T  25709399 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtattggaacttgttcatttcatattaaataggtagctttttaat 25709498  T
Q  223 aaataattgttg 234  Q
    |||| |||||||    
T  25709499 aaattattgttg 25709510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 32117993 - 32117891
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||||| | | |||| | ||||||||||| |||| | ||||||||| |||| |||||||    
T  32117993 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagtggcaagtttatcttgaaacttgtatattctatattaaatagataactttttaa 32117894  T
Q  222 taa 224  Q
    |||    
T  32117893 taa 32117891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 2276806 - 2276745
Alignment:
Q  170 gtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattg 231  Q
    ||||| |||| |||||||||||||||||| ||||||||| |||| |||||||||||||||||    
T  2276806 gtatgcttgtgttgaaacttgtgtattttatattaaatagataactttttaataaataattg 2276745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 19868241 - 19868184
Alignment:
Q  174 gtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattg 231  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  19868241 gtttgtcttgaaacttgtgtattttatattaaatatataactttttgataaataattg 19868184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 36991041 - 36991110
Alignment:
Q  164 aaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgtt 233  Q
    |||||||||| ||||||   |||||||||||||||||||||||||||| | ||||||||||||| |||||    
T  36991041 aaagtagtatatttgtagcaaaacttgtgtattttctattaaatatatgactttttaataaatagttgtt 36991110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 12085930 - 12086041
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| |   ||| |||||||||  ||||  ||||  ||||||||||||| |||| |||||||||| |||  ||||||    
T  12085930 ggtttttctatcatgtgcaaatttgcacataataagaagtttaaataagtaattttgacttgaaacttgtgttttttatattaaatatttaa-cttttaa 12086028  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  12086029 taaataattgttg 12086041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 12624798 - 12624707
Alignment:
Q  139 caaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattg 231  Q
    |||||||||| | ||||| || |||||| | ||| |||||| || ||||||||||||||| ||||||||||| || |||||||||||||||||    
T  12624798 caaatttgcacatgttaagaaatttaaaatggtaagtttgtctt-aaacttgtgtattttatattaaatatacaagtttttaataaataattg 12624707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 47201039 - 47200984
Alignment:
Q  174 gtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataatt 230  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  47201039 gtttgtattgaaa-ttgtgtattttatattaaatatataatcttttaataaataatt 47200984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 3561877 - 3561964
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatat 209  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||||||||  |||   || |||||||||| |||| ||||||||||    
T  3561877 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttatattaaatat 3561964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 42750459 - 42750412
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagta 172  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  42750459 ttttctatcatatgcaaatttgcatatgttaagaagtttaaagtagta 42750412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 45501637 - 45501526
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| |  |||| ||||||||| ||| |  ||||||||| |||||||  ||||  ||||||||||| || | || |||    
T  45501637 gtttttctatcatgtgcaaatttgcacatcttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaactgttgaat 45501538  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  45501537 aaataattgttg 45501526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 5833532 - 5833424
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| |||||||||||| | ||||| |||||||||| ||||  || || ||  |||||||| ||| | |||||||||| ||  |||||||||    
T  5833532 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagcagtaacttcgtcttagaacttgtgcattctatattaaatatgtagctttttaata 5833433  T
Q  224 aataattgt 232  Q
    |||| ||||    
T  5833432 aatagttgt 5833424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 11680069 - 11680129
Alignment:
Q  174 gtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    ||||||||||||| || |  ||||| |||||||||||||| ||||||||||||||||||||    
T  11680069 gtttgtattgaaatttttacattttatattaaatatataactttttaataaataattgttg 11680129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 39757109 - 39757220
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| |||||  |||   |||||| |||||| |||| |||||||||| | |  ||||||    
T  39757109 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaacttgaaatttgtgttttttatattaaatatgt-agcttttaa 39757207  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  39757208 tcaataattgttg 39757220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 219
Target Start/End: Original strand, 28061324 - 28061419
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataatttttt 219  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  |||||||||||| ||||||    
T  28061324 tttttctaacatgtgcaaatttgcacatgttaaagatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatatattttttt 28061419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 6587965 - 6587853
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagttt--aaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataatttttt 219  Q
    |||||||||||||| |||||||||||| |  |||| ||||||  |||  | ||  |||||||| ||||||||||||||  || ||||||| || ||||||    
T  6587965 ggtttttctatcatgtgcaaatttgcacatattaaaaagttttaaaaaaattaaatttgtattaaaacttgtgtatttaataataaatattta-tttttt 6587867  T
Q  220 aataaataattgtt 233  Q
    ||||||||||||||    
T  6587866 aataaataattgtt 6587853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 8420832 - 8420941
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||||||||||   |||||||| | | ||||| || |||||| | ||| |||| | ||  ||||||||| |||| ||||||||||| || |||||||    
T  8420832 ggtttttctatcatgaacaaatttgtacatgttaaaaaatttaaaatggtaagtttatcttataacttgtgtcttttatattaaatatacaactttttaa 8420931  T
Q  222 taaataattg 231  Q
    ||||||||||    
T  8420932 taaataattg 8420941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 222
Target Start/End: Original strand, 41331458 - 41331555
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||| |||||||||||| | | ||| || ||||||||||||  ||||  ||| |||||||| ||||| |||||||||| ||  ||||||||    
T  41331458 ttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatatgtaggtttttaat 41331555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 22041725 - 22041829
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| ||||||||||||   ||||| ||||| ||| || ||  ||| |||| ||| || |||| | | |||||||||||||| |||||||    
T  22041725 ggtttttctatcatgtgcaaatttgcacttgttaagaagttcaaaatactaaatttatattaaaatttatgtactgtatattaaatatataactttttaa 22041824  T
Q  222 taaat 226  Q
    |||||    
T  22041825 taaat 22041829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 33072160 - 33072052
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||| | | ||||| || |||||| |||||  |||| |||| || |||   ||||| |||||||||||||| |||||      
T  33072160 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatatataactttttgt 33072061  T
Q  222 taaataatt 230  Q
    |||||||||    
T  33072060 taaataatt 33072052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 36548459 - 36548570
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||| |||||| |||||||||||| | ||||| ||||||||| |||||  ||||  || ||| |||| | |||| |||||||||| ||| | |||||    
T  36548459 ggtttttttatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttaaaatttgtattttttatattaaatatgtaa-tatttaa 36548557  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  36548558 tcaataattgttg 36548570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 38798071 - 38798159
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  38798071 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 38798159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 42593395 - 42593483
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  42593395 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 42593483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 45645544 - 45645456
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  45645544 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 45645456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 384431 - 384540
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| | ||||| |||||||||||||||  |||   ||| ||||||| | |||| |||||||||| | |  |||||||    
T  384431 gtttttctatcat-tgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgttttttttatattaaatatgt-agcttttaat 384528  T
Q  223 aaataattgttg 234  Q
     |||||||||||    
T  384529 caataattgttg 384540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 29398134 - 29398221
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatata 210  Q
    ||||||||||||| | |||||||||| | ||||| ||||||||| ||| |  ||||||||| |||||||  ||||  |||||||||||    
T  29398134 gtttttctatcatgttcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata 29398221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 47457460 - 47457571
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || ||||||||||||  ||||  ||| || || || ||||| ||||| || | ||  |||| ||    
T  47457460 ggtttttctatcatgtgcaaatttgcacatgttaaaaaatttaaagtagtaactttgacttggaatttatgcattttatattatatgtgtagcttttaaa 47457559  T
Q  222 taaataattgtt 233  Q
    ||||||||||||    
T  47457560 taaataattgtt 47457571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 18102232 - 18102341
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtg-tattttctattaaatatataattttttaata 223  Q
    ||||||||||| |||||||||||| | ||||| ||||||||| || ||  ||||  |||||||||||| | |||| |||||||||| |||   ||||||     
T  18102232 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaattaataactttgacttgaaacttgtgtttttttatattaaatatgtaa-catttaatc 18102330  T
Q  224 aataattgttg 234  Q
    |||||||||||    
T  18102331 aataattgttg 18102341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 26037269 - 26037203
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgt 191  Q
    ||||||||||| |||||||||||| | ||||| ||||||||| ||| |  ||||||||| |||||||    
T  26037269 ttttctatcatgtgcaaatttgcagatgttaagaagtttaaaatagaaattttgtattggaacttgt 26037203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 27696792 - 27696742
Alignment:
Q  185 aacttgtgtattttctattaaatatataattttttaataaataattgttgc 235  Q
    |||||||| ||||| ||||||  |||||| |||||||||||||||||||||    
T  27696792 aacttgtgcattttttattaatgatataactttttaataaataattgttgc 27696742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 38798248 - 38798297
Alignment:
Q  163 taaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  38798248 taaagtagtaagtttatattggaacttgtgtattttacattaaatatata 38798297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 41572327 - 41572286
Alignment:
Q  193 tattttctattaaatatataattttttaataaataattgttg 234  Q
    |||||| |||||||||||||| ||| ||||||||||||||||    
T  41572327 tattttgtattaaatatataactttctaataaataattgttg 41572286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 46185419 - 46185374
Alignment:
Q  188 ttgtgtattttctattaaatatataattttttaataaataattgtt 233  Q
    ||||||||||  |||||||||||||  |||||||||||||||||||    
T  46185419 ttgtgtatttaatattaaatatatatctttttaataaataattgtt 46185374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 820540 - 820584
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaa 166  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||    
T  820540 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 820584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 6307681 - 6307570
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||| |||||| |||||||||||| | ||||| |||||||||||| ||||||||  ||| ||||||||||||||||||| ||||||||| |||||||    
T  6307681 ggtttttatatcatgtgcaaatttgcacatgttaagaagtttaaagtaatatgtttgatttggaacttgtgtattttctatt-aatatataaatttttaa 6307583  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  6307582 taaataattgttg 6307570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 36490958 - 36490846
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||||||||||  ||||||||||| | ||||| ||||||||| |||||  |||| |||| |||||||  ||||| |||| ||||||||| |||||||    
T  36490958 ggtttttctatcatgagcaaatttgcacatgttaagaagtttaaaatagtaactttgcattggaacttgtacattttgtatttaatatataactttttaa 36490859  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  36490858 taaataattgttg 36490846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 4249385 - 4249282
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataatt-tttta 220  Q
    |||||||||| ||| |||||||| ||| | |||||||||||||||||  || |||| ||||||||||||||||||||  ||||||||||||||| |||||    
T  4249385 ggtttttctaacatgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatatataattatttta 4249286  T
Q  221 ataa 224  Q
    ||||    
T  4249285 ataa 4249282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 4249709 - 4249607
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataatt-tttta 220  Q
    |||||||||| ||| |||||||| ||| | |||||||||||||||||  || |||| ||||||||||||||||||||  ||||||||||||||| |||||    
T  4249709 ggtttttctaacatgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatatataattatttta 4249610  T
Q  221 ata 223  Q
    |||    
T  4249609 ata 4249607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 4250033 - 4249931
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataatt-tttta 220  Q
    |||||||||| ||| |||||||| ||| | |||||||||||||||||  || |||| ||||||||||||||||||||  ||||||||||||||| |||||    
T  4250033 ggtttttctaacatgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatatataattatttta 4249934  T
Q  221 ata 223  Q
    |||    
T  4249933 ata 4249931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 13241934 - 13241828
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| || ||||||||| | ||||| || |||||| | ||| ||||||  || |||||||||||||  ||||||||||||||||||||||||    
T  13241934 tttttctatcatgtgaaaatttgcacatgttaagaaatttaaaatggtaagtttgtcgtgtaacttgtgtatttcatattaaatatataattttttaata 13241835  T
Q  224 aataatt 230  Q
    |||||||    
T  13241834 aataatt 13241828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 23576413 - 23576525
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  |||| |||||||||||   ||||| |||||||||||||| |||||      
T  23576413 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtattaaatatataactttttgt 23576512  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  23576513 taaataattgttg 23576525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 41625008 - 41624896
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||||| | ||| |||||||||||||||  ||||  ||| |||||||| ||||| |||||| ||| ||  |||||||    
T  41625008 ggtttttctatcatgtgcaaatttgcatatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaa 41624909  T
Q  222 taaataattgttg 234  Q
    ||| |||||||||    
T  41624908 taattaattgttg 41624896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 9516758 - 9516651
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| || ||||||||| | ||||| || |||||| | ||| |||| | ||  |||||||||||||| |||||||||||||| |||||||||    
T  9516758 tttttctatcatgtgtaaatttgcacatgttaagaaatttaaaatggtaagtttctcttataacttgtgtattttatattaaatatataactttttaata 9516659  T
Q  224 aataattg 231  Q
    ||||||||    
T  9516658 aataattg 9516651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 140 - 234
Target Start/End: Complemental strand, 49392242 - 49392150
Alignment:
Q  140 aaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    ||||||||| | ||||| || ||||||||||||||||||||||||||| |||||||||  |||||||  |||| ||||||||||||||| |||||    
T  49392242 aaatttgcacatgttaaaaaatttaaagtagtatgtttgtattgaaacatgtgtatttcttattaaa--tatacttttttaataaataactgttg 49392150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 3168067 - 3168180
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatat-ataatttttta 220  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||| ||| || || |||||| |||||||  ||||  |||||||||| ||  ||||| |    
T  3168067 ggtttttctatcatgtgcaaatttgcacacgttaaaaagtttaaaatagaattttagtattggaacttgtacatttaatattaaatataattttttttga 3168166  T
Q  221 ataaataattgttg 234  Q
    ||||||||||||||    
T  3168167 ataaataattgttg 3168180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 6754650 - 6754538
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| |||||||||||||||  ||||  ||| |||||||| ||||| |||||| ||| ||  |||||||    
T  6754650 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaa 6754551  T
Q  222 taaataattgttg 234  Q
    ||| |||||||||    
T  6754550 taattaattgttg 6754538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 13322055 - 13321943
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||| ||| |  ||||||||| || ||||  ||||  ||||||||||| || |||| ||    
T  13322055 ggtttttctatcatgtgcaaatttgcatatgttaagaagtttaaaatagaaattttgtattggaatttgtacatttaatattaaatataaaacttttgaa 13321956  T
Q  222 taaataattgttg 234  Q
     ||||||||||||    
T  13321955 aaaataattgttg 13321943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 38812919 - 38812807
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||| ||| ||| |  ||| |||||||||||||  ||||  ||||||||||| || |||| ||    
T  38812919 ggtttttctatcatgtgcaaatttgcacatgttaagaagttcaaaatagaaattttatattgaaacttgtacatttaatattaaatataaaacttttgaa 38812820  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  38812819 taaataattgttg 38812807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 39150326 - 39150437
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| |||||||||||||||  ||||  ||| || |||||| |||| |||||||||| |||  ||||||    
T  39150326 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaa-cttttaa 39150424  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  39150425 taaataattgttg 39150437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 5057180 - 5057077
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    |||||||||| ||||||||||||||| | ||| | ||||||||||| |||  ||||  |||||||||||  ||||| |||||||||||||  ||||||||    
T  5057180 gtttttctattatatgcaaatttgcaaatgttcaaaagtttaaagtggtaactttgacttgaaacttgtacattttatattaaatatatatctttttaat 5057081  T
Q  223 aaat 226  Q
    ||||    
T  5057080 aaat 5057077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 35438892 - 35438785
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| |||||||||||| | ||||| || |||||| | ||| |||| | ||  || ||||||||||| |||||||||||||| |||||||||    
T  35438892 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttatcttataatttgtgtattttatattaaatatataactttttaata 35438793  T
Q  224 aataattg 231  Q
    || |||||    
T  35438792 aacaattg 35438785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 51920431 - 51920542
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| | |||||||| |||||| ||| |  ||| |||| ||| |||| |||||  ||||||||||| || |||| |||    
T  51920431 gtttttctatcatgtgcaaatttgcacatgttaataaatttaaaatagaaattttatattaaaatttgtatatttaatattaaatataaaacttttgaat 51920530  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  51920531 aaataattgttg 51920542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 30172058 - 30171952
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||||| |||  ||||  ||| |||||||| ||||  |||||||||| ||  |||||||    
T  30172058 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtagctttttaa 30171959  T
Q  222 taaataa 228  Q
    |||||||    
T  30171958 taaataa 30171952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 30187599 - 30187493
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||||| |||  ||||  ||| |||||||| ||||  |||||||||| ||  |||||||    
T  30187599 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtagctttttaa 30187500  T
Q  222 taaataa 228  Q
    |||||||    
T  30187499 taaataa 30187493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 52337915 - 52337834
Alignment:
Q  152 gttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgtt 233  Q
    ||||| ||||||||| |||||  | || |||| ||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  52337915 gttaagaagtttaaaatagtaaatatgcattgcaacttatgtattttatattaaatatataaatttttaataaataattgtt 52337834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 313928 - 313817
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||||||||  |||   ||| ||||||||| |||| |||||||||| | |  ||||||    
T  313928 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgt-agcttttaa 313830  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  313829 tcaataattgttg 313817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 1502719 - 1502831
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  |||| |||| || |||   ||||| |||||||||||||| |||||      
T  1502719 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatatataactttttgt 1502818  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  1502819 taaataattgttg 1502831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 6180365 - 6180257
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| ||| |  ||| ||||| |||||||  ||||  ||||||||||| || |||| ||    
T  6180365 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgtacatttaatattaaatataaaacttttaaa 6180266  T
Q  222 taaataatt 230  Q
    |||||||||    
T  6180265 taaataatt 6180257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 6569984 - 6570095
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||||||||  |||   ||| ||||||||| |||| |||||||||| | |  ||||||    
T  6569984 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgt-agcttttaa 6570082  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  6570083 tcaataattgttg 6570095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 17919632 - 17919521
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| |   ||| |||||||||||||||  ||||  ||| || |||||| |||| |||||||||| |||  ||||||    
T  17919632 ggtttttctatcatgtgcaaatttgcacataataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaa-cttttaa 17919534  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  17919533 taaataattgttg 17919521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 22167514 - 22167402
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||| ||||||| |||||||||||| | | ||| ||||||||| ||| |  ||||||||| |||||||  ||||  ||||||||||| | ||||| ||    
T  22167514 ggttttcctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatataaattttttgaa 22167415  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  22167414 taaataattgttg 22167402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 30362994 - 30363106
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| || |||||| |||||  ||||  ||| |||||||| ||||| |||||||||| ||  |||||||    
T  30362994 ggtttttctatcatgtgcaaatttgcacatgataacaaatttaaaatagtaactttgacttggaacttgtgcattttatattaaatatgtaggtttttaa 30363093  T
Q  222 taaataattgttg 234  Q
    ||| |||||||||    
T  30363094 taattaattgttg 30363106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 23591876 - 23591769
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| | ||||| || ||| || ||  |  |||| |||| |||||||  ||||| |||||||||||||| ||||||||    
T  23591876 gtttttctatcatgtgcaaatttgcacatgttaagaaattttaaataacaactttgcattggaacttgtacattttgtattaaatatataactttttaat 23591777  T
Q  223 aaataatt 230  Q
    ||||||||    
T  23591776 aaataatt 23591769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 26978174 - 26978115
Alignment:
Q  175 tttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    ||||||||||||||||| |||||  ||||||||||| ||||||| |||||||||||||||    
T  26978174 tttgtattgaaacttgtatatttaatattaaatataaaatttttgaataaataattgttg 26978115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 29635748 - 29635855
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |  ||||||| | | ||||| || |||||| |||||  ||| ||||||||||||| |||||| |||| || |||||| ||||||||    
T  29635748 gtttttctatcatttataaatttgtacatgttaaaaaatttaaaatagtaactttatattgaaacttgtatattttgtatttaacatataactttttaat 29635847  T
Q  223 aaataatt 230  Q
    ||||||||    
T  29635848 aaataatt 29635855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 34802146 - 34802041
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| | |||  |||||  || |||||||| ||||  |||||||||| || ||||||||    
T  34802146 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatggtaattttgt-ctggaacttgtgcatttcatattaaatatgtagttttttaa 34802048  T
Q  222 taaataa 228  Q
    |||||||    
T  34802047 taaataa 34802041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 32543052 - 32543161
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataa 224  Q
    |||| ||||||||||||||||||| | ||||| ||||| ||  ||||| |||||||||  || |||||  | || |||||||||||   |||||||||||    
T  32543052 ttttatatcatatgcaaatttgcacatgttaagaagttcaagttagtaagtttgtattagaatttgtgcgtattatattaaatatactgttttttaataa 32543151  T
Q  225 ataattgttg 234  Q
    ||||||||||    
T  32543152 ataattgttg 32543161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 50467436 - 50467493
Alignment:
Q  174 gtttgtattgaaacttgtgtattttctattaaa-tatataattttttaataaataatt 230  Q
    |||||| ||||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  50467436 gtttgtcttgaaacttatgtattttatattaaaatatataattttttaataaataatt 50467493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 25465337 - 25465225
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||| ||| |||||  |||| |||| |||||||| ||||  |   |||||| ||| ||||| |    
T  25465337 ggtttttctatcatgtgcaaatttgcacatgttaagaagttcaaaatagtaaatttgcattggaacttgtgcatttaatggaaaatatttaactttttga 25465238  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  25465237 taaataattgttg 25465225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 30288863 - 30288974
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| ||||||||| || | ||||| |||||||||||||||  |||   ||| ||||||||| |||| |||||||||| | |  ||||||    
T  30288863 ggtttttctatcatgtgcaaatttacacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgt-agcttttaa 30288961  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  30288962 tcaataattgttg 30288974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 34050335 - 34050394
Alignment:
Q  175 tttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    ||||||||||||||| |  ||||| |||| ||||||||||||||| ||||||||||||||    
T  34050335 tttgtattgaaacttttacattttatatttaatatataattttttgataaataattgttg 34050394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 24669088 - 24669006
Alignment:
Q  140 aaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||| | ||||| ||||||||| |||||  ||| ||||  ||||| || ||||| |||||||||||||||||||||||    
T  24669088 aaatttgcacatgttaagaagtttaaaatagtaaatttatattataacttatgcattttatattaaatatataattttttaat 24669006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 43909368 - 43909273
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||| |||||||||||| |  |||| || ||| || | ||| |||||| ||  |||||||||||||| |||||||||||||| |||||||    
T  43909368 tttttctatcatgtgcaaatttgcaca--ttaaaaaattttaaatggtaagtttgtcttataacttgtgtattttatattaaatatataactttttaa 43909273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 8062368 - 8062272
Alignment:
Q  137 tgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    |||||||||||| | ||||| |||||||||||||||  |||   |||||| || ||| |||| |||||||||||| | |||||||| |||||||||||    
T  8062368 tgcaaatttgcacatgttaaaaagtttaaagtagtaactttaatttgaaatttatgttttttatattaaatatat-agtttttaatcaataattgttg 8062272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 30237087 - 30237148
Alignment:
Q  43 ctaacactctctttcatatagggtgaacttactaaaatgtcatttcaaatagggtgtataat 104  Q
    |||||||||||||| |||| || |||| ||||||||||||||||||| ||  ||||||||||    
T  30237087 ctaacactctcttttatatgggatgaaattactaaaatgtcatttcacatgaggtgtataat 30237148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 33048177 - 33048222
Alignment:
Q  188 ttgtgtattttctattaaatatataattttttaataaataattgtt 233  Q
    |||| |||||| |||||||||||||| |||||||||||||||||||    
T  33048177 ttgtatattttatattaaatatataactttttaataaataattgtt 33048222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 35512904 - 35512792
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| ||| |  ||| ||||| ||||||   ||||  ||||||||||| || |||| ||    
T  35512904 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgcacatttaatattaaatataaaacttttgaa 35512805  T
Q  222 taaataattgttg 234  Q
    || |||| |||||    
T  35512804 tatataaatgttg 35512792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 39310785 - 39310897
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| ||| |  ||||||||| || ||    ||||  |||||| |||| || |||| ||    
T  39310785 ggtttttctatcatgtgcaaatttgcacatgttaaaaagtttaaaatagaaattttgtattggaattttcacatttaatattaagtataaaacttttgaa 39310884  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  39310885 taaataattgttg 39310897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 42589349 - 42589261
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  42589349 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 42589261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 44013102 - 44013014
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  44013102 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 44013014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 47990148 - 47990046
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    |||||| |||||||||||||||| || | ||||||||| ||||| ||||| |||||||    ||||| || |||||  ||||||||||||| ||||||||    
T  47990148 gtttttatatcatatgcaaatttacacatgttaataag-ttaaaatagtaagtttgtacgataacttatgcattttacattaaatatataa-tttttaat 47990051  T
Q  223 aaata 227  Q
    |||||    
T  47990050 aaata 47990046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 10096731 - 10096786
Alignment:
Q  175 tttgtattgaaacttgtgtattttctattaaatatataattttttaataaataatt 230  Q
    ||||| || |||||||| |||||  |||||||||||||||||||||||||| ||||    
T  10096731 tttgtgttaaaacttgtctatttaatattaaatatataattttttaataaaaaatt 10096786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 6520811 - 6520778
Alignment:
Q  201 attaaatatataattttttaataaataattgttg 234  Q
    ||||||||| ||||||||||||||||||||||||    
T  6520811 attaaatatttaattttttaataaataattgttg 6520778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 44918203 - 44918092
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| ||||||||| || | ||||| || ||||||||||||  |||   ||| ||||| ||| |||| |||||||||| | |  ||||||    
T  44918203 ggtttttctatcatgtgcaaatttacacatgttaagaaatttaaagtagtaactttaatttggaacttatgttttttatattaaatatgt-agcttttaa 44918105  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  44918104 tcaataattgttg 44918092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 27019439 - 27019327
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||| ||| |  |||||||||||||||||  ||||  ||||||||||| || |||| ||    
T  27019439 ggtttttctatcatgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttgaa 27019340  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  27019339 taaataattgttg 27019327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 55814041 - 55813931
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    ||||| ||||||||||||||||||| | ||||| ||||||||| || ||  |||||||||||| ||||  ||| | |||||||||||||| |||||||||    
T  55814041 tttttgtatcatatgcaaatttgcacatgttaaaaagtttaaaataataattttgtattgaaatttgtacattctgtattaaatatataactttttaata 55813942  T
Q  224 aataattgttg 234  Q
    |||||||||||    
T  55813941 aataattgttg 55813931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 2097049 - 2096938
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    |||||| |||| | || ||||||||| | ||||| ||||| ||| | ||| |||||||||| |||||||| ||||| |||||||||||||| ||||||||    
T  2097049 gtttttttatcctgtgaaaatttgcacatgttaagaagttcaaaatggtaagtttgtattggaacttgtgcattttatattaaatatataactttttaat 2096950  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  2096949 aaataattgttg 2096938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 49250336 - 49250437
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataat-tttttaat 222  Q
    |||||||| ||| |||||||||||||| ||||| || |||||||||| | |||| ||||||||||||||||||||  |||||||||||| | ||||||||    
T  49250336 tttttctaacatgtgcaaatttgcatatgttaagaaatttaaagtagcaagtttatattgaaacttgtgtattttacattaaatatatattctttttaat 49250435  T
Q  223 aa 224  Q
    ||    
T  49250436 aa 49250437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 16069206 - 16069318
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||| ||| ||||||||||||||||| | ||||| |||||| || ||| || |||||||||||| ||||  ||||  ||||||||||| | ||||||||    
T  16069206 ggtttatctgtcatatgcaaatttgcacatgttaagaagttttaaatagaatttttgtattgaaatttgtacatttaatattaaatataaatttttttaa 16069305  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  16069306 taaataattgttg 16069318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 19468373 - 19468261
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||||||| || |||||||||||| | ||||| ||||||||| ||| |  |||||||||||||||||  ||||  ||||||||||| || |||| ||    
T  19468373 ggtttttctattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttgaa 19468274  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  19468273 taaataattgttg 19468261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 49181251 - 49181139
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| ||||||||||||   ||||| ||||| ||| |||||  ||||||||| |||||||| ||||| |||||||||| ||| |||| ||    
T  49181251 ggtttttctatcatgtgcaaatttgcacctgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaa 49181152  T
Q  222 taaataattgttg 234  Q
    ||||| |||||||    
T  49181151 taaatgattgttg 49181139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 50352481 - 50352369
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||||||||||||||||||||||| | ||||| || |||||| |||||  |||| |||| ||||||   ||||| |||||||||||||| |||||      
T  50352481 ggtttttctatcatatgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaacttgaacattttgtattaaatatataactttttgt 50352382  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  50352381 taaataattgttg 50352369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 51070399 - 51070504
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| || |||||||||  |||||| || |||||| | ||| |||||| ||| |||||||||||||| |||||||||||||| |||||||||    
T  51070399 tttttctatcatgtgaaaatttgca--cgttaagaaatttaaaatggtaagtttgttttgtaacttgtgtattttatattaaatatataactttttaata 51070496  T
Q  224 aataattg 231  Q
    ||| ||||    
T  51070497 aatgattg 51070504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 218
Target Start/End: Complemental strand, 4329773 - 4329677
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttt 218  Q
    |||||||||||||| |||||||||||||| ||||| |||||||||||||||  ||||  |||||| || ||| |||| |||||||||| ||| ||||    
T  4329773 ggtttttctatcatgtgcaaatttgcatatgttaaaaagtttaaagtagtaactttgacttgaaatttatgttttttatattaaatatgtaactttt 4329677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 17410003 - 17409891
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| ||||||||| ||| |  ||||||||| |||||||  ||||  ||||||||||| | ||||| ||    
T  17410003 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatataaattttttgaa 17409904  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  17409903 taaataattgttg 17409891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 19450899 - 19451011
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||||||| || |||||||||||| | ||||| ||||||||| ||| |  ||||||||| |||||||  ||||  ||||||||||| || |||| ||    
T  19450899 ggtttttctattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaa 19450998  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  19450999 taaataattgttg 19451011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 34941457 - 34941345
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| ||| |||||||| | | ||| ||||||||| |||||  |||| |||| |||||||  ||||| |||| ||||||||| |||||||    
T  34941457 ggtttttctatcatgtgcgaatttgcacatgataagaagtttaaaatagtaattttgcattggaacttgtacattttgtatttaatatataactttttaa 34941358  T
Q  222 taaataattgttg 234  Q
    |||||| ||||||    
T  34941357 taaatagttgttg 34941345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 41415556 - 41415667
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||| |||||| |||||||||||| | | |||||||||||||||||||  ||||  |||||| |||||| |||| |||||||||| | |  ||||||    
T  41415556 ggtttttatatcatgtgcaaatttgcacatgataataagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaatatgt-agcttttaa 41415654  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  41415655 taaataattgttg 41415667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 23545654 - 23545543
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| | ||||||||||||||| ||  |  ||||||||| || ||||  ||||  ||||||||||| || |||| |||    
T  23545654 gtttttctatcatgtgcaaatttgcacatgttaataagtttaaaatataaattttgtattggaaattgtacatttaatattaaatataaaacttttgaat 23545555  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  23545554 aaataattgttg 23545543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 38222412 - 38222353
Alignment:
Q  175 tttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    |||||||| ||| ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  38222412 tttgtattaaaatttgtggattttatattaaatatataattttttaataaataattgttg 38222353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 16667385 - 16667495
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| |||||||||||| | ||||| ||||||||| |  ||  |||   |||||||||||||||||| |||||||||| ||  |||||||||    
T  16667385 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatgataattttaacttgaaacttgtgtattttatattaaatatgtagctttttaata 16667484  T
Q  224 aataattgttg 234  Q
    ||||| |||||    
T  16667485 aataagtgttg 16667495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 23051381 - 23051490
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| || ||||||||||||  ||||  ||||||||||||| |||| ||| |||||| |||  ||||||    
T  23051381 ggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgttttttatataaaatatgtaa-cttttaa 23051479  T
Q  222 taaataattgt 232  Q
    |||||||||||    
T  23051480 taaataattgt 23051490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 52391475 - 52391365
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| || ||||||||| | ||||| ||||||||| ||| |  ||||||||| |||||||  ||||  ||||||||||| || |||| ||||    
T  52391475 tttttctatcatgtgtaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaata 52391376  T
Q  224 aataattgttg 234  Q
    |||||||||||    
T  52391375 aataattgttg 52391365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 33559314 - 33559269
Alignment:
Q  188 ttgtgtattttctattaaatatataattttttaataaataattgtt 233  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  33559314 ttgtgtattttatattaaatatataattttttaataaataattgtt 33559269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 47326892 - 47326997
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| | ||||| ||||||||||| |||  ||||  ||| ||||| || ||||  |||||||||| || |||||||||    
T  47326892 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaatatgtagttttttaat 47326991  T
Q  223 aaataa 228  Q
    ||||||    
T  47326992 aaataa 47326997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 47341688 - 47341793
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| | ||||| ||||||||||| |||  ||||  ||| ||||| || ||||  |||||||||| || |||||||||    
T  47341688 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaatatgtagttttttaat 47341787  T
Q  223 aaataa 228  Q
    ||||||    
T  47341788 aaataa 47341793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 53376407 - 53376520
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaat-atataatttttta 220  Q
    ||||||| |||||| || ||||||||| | ||||| ||||||||| ||  | ||||||||| |||| |||| ||||| |||||||| |||||| ||||||    
T  53376407 ggtttttttatcatgtgaaaatttgcacatgttaagaagtttaaaataagaagtttgtattaaaacctgtgcattttatattaaattatataacttttta 53376506  T
Q  221 ataaataattgttg 234  Q
    |||||| |||||||    
T  53376507 ataaatgattgttg 53376520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 24685012 - 24684904
Alignment:
Q  126 tttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaa 225  Q
    |||||||||| |||||||||||| | ||||| ||||||||| ||| |  |||| |||| |||||||  ||||  ||||||||||| || |||| ||||||    
T  24685012 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtacatttaatattaaatataaaacttttgaataaa 24684913  T
Q  226 taattgttg 234  Q
    |||||||||    
T  24684912 taattgttg 24684904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 33632202 - 33632313
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| ||| |||||||| | ||||| ||||||||| ||| |  ||| |||||||||||||  ||||  ||||||||||| || |||| ||    
T  33632202 ggtttttctatcatgtgcgaatttgcacatgttaaaaagtttaaaatagaaa-tttatattgaaacttgtacatttaatattaaatataaaacttttgaa 33632300  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  33632301 taaataattgttg 33632313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 40049737 - 40049625
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||||||| || |||||||||||| | ||||| || |||||| |||||  |||| |||| |||||    ||||| ||||||||||||||||||||      
T  40049737 ggtttttctattatgtgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaactttaacattttttattaaatatataattttttgt 40049638  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  40049637 taaataattgttg 40049625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 48910803 - 48910851
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagta 172  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  48910803 tttttctatcatatgcaaatttgcatatgttaagaagtttaaagtagta 48910851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 51691520 - 51691412
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| || ||||||||| | ||||| || ||| || |||||  |||| |||| ||||||| ||||||  ||||||||||||  |||||||    
T  51691520 ggtttttctatcatgtgtaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgaattaaatatatagctttttaa 51691421  T
Q  222 taaataatt 230  Q
    |||||||||    
T  51691420 taaataatt 51691412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 4779436 - 4779547
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| | ||||| ||||||| | | | |  |||| ||||||| || |  ||||| || |||||||||||||||| |||    
T  4779436 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaat 4779535  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  4779536 aaataattgttg 4779547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 27756740 - 27756638
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||| |||||| | ||||||| || | ||||| || |||||||||| | |||||| ||||||||||| |||| | ||||||||| |||| |||||||    
T  27756740 ggtttttttatcatgtacaaatttacaaatgttaagaaatttaaagtagcaagtttgtcttgaaacttgtatattctatattaaatagataactttttaa 27756641  T
Q  222 taa 224  Q
    |||    
T  27756640 taa 27756638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 54495636 - 54495742
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||||| |||  |||   ||| |||||||| ||||  |||||||||| ||  |||||||    
T  54495636 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttaacttggaacttgtgcatttcatattaaatatgtagctttttaa 54495735  T
Q  222 taaataa 228  Q
    |||||||    
T  54495736 taaataa 54495742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 7349867 - 7349756
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| || ||||||| | | | ||| |||||||||||||||  ||||  || |||||||||| |||| |||||||||| |||  ||||||    
T  7349867 ggtttttctatcatgtgtaaatttgtacatgataagaagtttaaagtagtaactttgacttaaaacttgtgttttttatattaaatatgtaa-cttttaa 7349769  T
Q  222 taaataattgttg 234  Q
     ||||||||||||    
T  7349768 caaataattgttg 7349756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 9759141 - 9759253
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| | |||||||||| | ||||| || |||||| |||||  |||| |||| || |||   ||||| |||||||||||||| |||||      
T  9759141 ggtttttctatcatgtacaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaagttgaacattttgtattaaatatataactttttgt 9759240  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  9759241 taaataattgttg 9759253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 33288351 - 33288275
Alignment:
Q  158 aagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    ||||||||| |||||  ||| |||| ||||||||  ||||| ||||||||| |||||||||||| ||||||||||||    
T  33288351 aagtttaaaatagtaaatttatattaaaacttgtacattttgtattaaatacataattttttaacaaataattgttg 33288275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 39877009 - 39876897
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| || ||||||||| | ||||| || |||||| |||||  |||| |||| ||||||   ||||| ||| |||||||||| |||||      
T  39877009 ggtttttctatcatgtgtaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtatcaaatatataactttttgt 39876910  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  39876909 taaataattgttg 39876897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 41887570 - 41887658
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||||||||||||||||||  ||||||||||||    
T  41887570 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattttacattaaatatata 41887658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 29190815 - 29190902
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatat 209  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| |||||  ||||  ||| ||||||||| |||  ||||||||||    
T  29190815 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttggaacttgtgtttttaatattaaatat 29190902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 10658417 - 10658527
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    |||||| |||||| ||| |||||||| | ||||| || |||||| |||||  |||  |||||||||||   ||||| |||||||||||||| |||||  |    
T  10658417 gtttttttatcatgtgctaatttgcacatgttaaaaaatttaaaatagtaactttacattgaaacttgaacattttgtattaaatatataactttttgtt 10658516  T
Q  223 aaataattgtt 233  Q
    |||||||||||    
T  10658517 aaataattgtt 10658527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 10813493 - 10813543
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagta 172  Q
    |||||||||||||| |||| ||||||||| | |||||||||||||||||||    
T  10813493 ggtttttctatcatgtgcagatttgcatatgataataagtttaaagtagta 10813543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 10872562 - 10872672
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    |||||| |||||| ||| |||||||| | ||||| || |||||| |||||  |||  |||||||||||   ||||| |||||||||||||| |||||  |    
T  10872562 gtttttttatcatgtgctaatttgcacatgttaaaaaatttaaaatagtaactttacattgaaacttgaacattttgtattaaatatataactttttgtt 10872661  T
Q  223 aaataattgtt 233  Q
    |||||||||||    
T  10872662 aaataattgtt 10872672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 208
Target Start/End: Original strand, 18882266 - 18882352
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaata 208  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| ||| |  ||||||||| |||||||  ||||  |||||||||    
T  18882266 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaata 18882352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 23553747 - 23553638
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| |||||||||||| | ||||| |||||||||||||||  |||   || ||| |||| | |||| |||||||||| | | ||||||||     
T  23553747 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaacttaaaatttgtattttttatattaaatatgt-agtttttaatc 23553649  T
Q  224 aataattgttg 234  Q
    |||||||||||    
T  23553648 aataattgttg 23553638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 27362570 - 27362464
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||||| |||  ||||  ||| || ||||| ||||  |||||||||| ||  ||||| |    
T  27362570 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaatttgtgcatttcatattaaatatgtagctttttga 27362471  T
Q  222 taaataa 228  Q
    |||||||    
T  27362470 taaataa 27362464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 35999946 - 35999996
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagta 172  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||||||||    
T  35999946 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagta 35999996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 39796184 - 39796226
Alignment:
Q  188 ttgtgtattttctattaaatatataattttttaataaataatt 230  Q
    ||||||||||| |||||||||||||| ||||||||||||||||    
T  39796184 ttgtgtattttatattaaatatataaatttttaataaataatt 39796226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 53961500 - 53961414
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatat 209  Q
    ||||||||||| | |||||||||||| | ||||| ||||||||| |||||  ||||  |||||| |||||| |||| ||||||||||    
T  53961500 gtttttctatcgtgtgcaaatttgcacatgttaagaagtttaaattagtaattttgacttgaaatttgtgttttttatattaaatat 53961414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 54506463 - 54506529
Alignment:
Q  168 tagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    ||||| ||||| |||||||| ||| |||||| ||||||||||| |||||||||| |||| |||||||    
T  54506463 tagtaagtttgcattgaaacatgtatattttgtattaaatatacaattttttaacaaatgattgttg 54506529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 137 - 234
Target Start/End: Original strand, 37432880 - 37432977
Alignment:
Q  137 tgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    |||||| ||||||| ||||| ||||||||| ||  |  |||||||||||| ||||  ||||  || |||||||| ||||||| |||||||||||||||    
T  37432880 tgcaaacttgcatatgttaagaagtttaaaataaaaattttgtattgaaatttgtacatttaatactaaatataaaatttttaaataaataattgttg 37432977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 32459507 - 32459419
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  32459507 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 32459419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 6875618 - 6875571
Alignment:
Q  184 aaacttgtgtattttctattaaatatataattttttaataaataattg 231  Q
    ||||||||||||||| |||||||| ||||| |||| ||||||||||||    
T  6875618 aaacttgtgtattttatattaaatttataacttttcaataaataattg 6875571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 19838691 - 19838802
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    |||||| |||||| || ||||||||| | |||||   ||||||| ||| |  ||||||||| |||||||  ||||  ||||||||||| || |||| |||    
T  19838691 gtttttttatcatgtgaaaatttgcacatgttaacccgtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaat 19838790  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  19838791 aaataattgttg 19838802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 233
Target Start/End: Original strand, 35645072 - 35645111
Alignment:
Q  194 attttctattaaatatataattttttaataaataattgtt 233  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  35645072 attttatattaaatatataactttttaataaataattgtt 35645111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 226
Target Start/End: Original strand, 46607565 - 46607600
Alignment:
Q  191 tgtattttctattaaatatataattttttaataaat 226  Q
    |||||||| |||||||||||||||||||||||||||    
T  46607565 tgtattttatattaaatatataattttttaataaat 46607600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 25843473 - 25843380
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaac--ttgtgtattttctattaaatatataa 213  Q
    |||||||||||||  |||||||||| | | ||||| |||||||||||||||  ||||| ||  |||  ||||| ||||| ||||||||||||||    
T  25843473 ggtttttctatcacgtgcaaatttgtagatgttaaaaagtttaaagtagtaactttgtcttagaacttttgtgcattttatattaaatatataa 25843380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 25938980 - 25938942
Alignment:
Q  175 tttgtattgaaacttgtgtattttctattaaatatataa 213  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  25938980 tttgtattagaacttgtgtattttctattaaatatataa 25938942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 41970531 - 41970454
Alignment:
Q  153 ttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataatt 230  Q
    |||| ||||||||| |||||  |||||||||||||||  ||||||| ||||||  ||||||  ||||| |||||||||    
T  41970531 ttaaaaagtttaaaatagtaattttgtattgaaacttacgtattttatattaataatataacattttagtaaataatt 41970454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 43759507 - 43759556
Alignment:
Q  163 taaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  43759507 taaagtagtaagtttatattggaacttgtgtattttacattaaatatata 43759556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 44571567 - 44571636
Alignment:
Q  161 tttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataatt 230  Q
    ||||||||||||  ||||||||  ||||| |  ||||| |||||||||||||| |||||||||| |||||    
T  44571567 tttaaagtagtagatttgtatttgaacttatacattttatattaaatatataaatttttaataagtaatt 44571636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 231
Target Start/End: Complemental strand, 1378195 - 1378088
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||  ||||| |||||| | ||||| || |||||| | |||  ||| | |||||||||||  ||||  ||||||||||||||  |||||||    
T  1378195 gtttttctatcaggtgcaa-tttgcacatgttaagaaatttaaaatggtaaatttatcttgaaacttgtacatttaatattaaatatataacattttaat 1378097  T
Q  223 aaataattg 231  Q
    |||||||||    
T  1378096 aaataattg 1378088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 49228833 - 49228757
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtatttt 198  Q
    |||||||||||||| ||||||||||||   ||||| ||||||||| |||||  ||||  ||| ||||||||| ||||    
T  49228833 ggtttttctatcatgtgcaaatttgcacgtgttaagaagtttaaattagtaactttgacttggaacttgtgtttttt 49228757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 51268667 - 51268729
Alignment:
Q  175 tttgtattgaaacttgtgtattttctattaaatata---taattttttaataaataattgttg 234  Q
    ||||||| |||||||||| ||||| ||| |||||||   ||||||| ||||||||||||||||    
T  51268667 tttgtatcgaaacttgtgcattttatataaaatatagtataattttctaataaataattgttg 51268729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 17996 - 18107
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||||||||||||||||   ||||| | ||| ||| |||||||||||||||| || ||||  ||||| |||||||||||||| ||| ||||    
T  17996 gtttttctatcatatgcaaatttgcacgtgttaaaatgttcaaaatagtatgtttgtattggaatttgtacattttatattaaatatataactttctaat 18095  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  18096 aaataattgttg 18107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 17788 - 17898
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    |||||||||| || |||||||||||| | |||| |||||| ||| |||||  ||| ||||| |||||||  ||||| ||||||| |||||| ||||||||    
T  17788 gtttttctataatttgcaaatttgcacatgttattaagttaaaaatagtaactttatattggaacttgtacattttgtattaaagatataaatttttaat 17887  T
Q  223 aaataattgtt 233  Q
    |||||||||||    
T  17888 aaataattgtt 17898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 6e-23; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 15240950 - 15241061
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||| | | ||||| ||||| ||| || ||  |||||||||||| ||||| || || |||||||||||||||||||||||    
T  15240950 gtttttctatcatgtgcaaatttgtacatgttaaaaagttcaaaatattaaatttgtattgaaatttgtgcatgttatattaaatatataattttttaat 15241049  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  15241050 aaataattgttg 15241061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 2795702 - 2795591
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||||||||  ||||  ||| ||||||||| |||| |||||||||| |||  ||||||    
T  2795702 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaa-cttttaa 2795604  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  2795603 tcaataattgttg 2795591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 6863735 - 6863623
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  ||| ||||| ||||||   ||||| |||||||||||||| ||||||     
T  6863735 ggtttttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttatattggaacttgaacattttgtattaaatatataactttttat 6863636  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  6863635 taaataattgttg 6863623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 11636910 - 11636799
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| |||||||||||||||  ||||  |||||||||||| | ||| |||||||||| ||| |||||||    
T  11636910 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttaa 11636812  T
Q  222 taaataattgttg 234  Q
    ||| |||||||||    
T  11636811 taattaattgttg 11636799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 35151398 - 35151290
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||| ||||| |||||||||||||| ||||| ||||||||| |||||  |||  |||| |||||||| |||||  |||||||  ||||||||||||    
T  35151398 ggtttttcaatcatgtgcaaatttgcatatgttaaaaagtttaaaatagtaaatttacattgtaacttgtgcattttaaattaaatgaataattttttaa 35151299  T
Q  222 taaataatt 230  Q
    |||||||||    
T  35151298 taaataatt 35151290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 3398399 - 3398291
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| ||| |  ||||||||| |||||||  ||||  ||||||||||| || |||| ||    
T  3398399 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttaaa 3398300  T
Q  222 taaataatt 230  Q
    |||||||||    
T  3398299 taaataatt 3398291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 8103579 - 8103691
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| |||||||||||||||  ||||  ||| |||||||| ||||| |||||| ||| ||  |||||||    
T  8103579 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaa 8103678  T
Q  222 taaataattgttg 234  Q
    ||| |||||||||    
T  8103679 taattaattgttg 8103691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 18841704 - 18841816
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||| |||| | |||||||||||||| ||||| ||||||||| ||| |  |||||||||||| ||||  ||||  ||||||||||| || |||| ||    
T  18841704 ggtttttttatcgtgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaatttgtacatttaatattaaatataaaacttttgaa 18841803  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  18841804 taaataattgttg 18841816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 30839960 - 30839848
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  |||| |||| ||||||   ||||| |||||||||||||| |||||      
T  30839960 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgt 30839861  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  30839860 taaataattgttg 30839848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 36597758 - 36597646
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  |||| |||| ||||||   ||||| |||||||||||||| |||||      
T  36597758 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgt 36597659  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  36597658 taaataattgttg 36597646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 40166459 - 40166349
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    |||||||||| || |||||||||||| | |||||||| | |||| ||| |  | |||||||||||||||  ||||| |||||||||||||| ||||| ||    
T  40166459 gtttttctattatgtgcaaatttgca-atgttaataaatctaaattagcaactatgtattgaaacttgtacattttgtattaaatatataactttttgat 40166361  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  40166360 aaataattgttg 40166349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 16174623 - 16174732
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| |||||||||||| |   ||| || ||||||||||||  |||| ||||||||||||| | ||| |||||||||| ||| |||||||||    
T  16174623 tttttctatcatttgcaaatttgcacatcataagaaatttaaagtagtaactttgaattgaaacttgtgca-tttatattaaatatgtaagtttttaata 16174721  T
Q  224 aataattgttg 234  Q
    | |||||||||    
T  16174722 attaattgttg 16174732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 32019984 - 32020086
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataa-ttttttaa 221  Q
    ||||||||||||| |||||||||||| | ||||| || |||||| | ||| |||||| ||| |||||||||||| | ||||||||| |||| ||||||||    
T  32019984 gtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttgtcttggaacttgtgtattctatattaaatagataacttttttaa 32020083  T
Q  222 taa 224  Q
    |||    
T  32020084 taa 32020086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 41350379 - 41350270
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    ||||| |||||| |||||||||||| | ||||| |||||||||||||||  ||||  ||| ||||||||  |||| |||||||||| |||  ||||||||    
T  41350379 tttttttatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttgacttggaacttgtgctttttatattaaatatgtaa-cttttaata 41350281  T
Q  224 aataattgttg 234  Q
    |||||||||||    
T  41350280 aataattgttg 41350270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 230
Target Start/End: Original strand, 31567493 - 31567598
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataa 224  Q
    |||||||||||||||||||||||| | ||||| || |||||| | |||  ||||| |||||| ||||  ||||| |||||||||| || ||||||||| |    
T  31567493 ttttctatcatatgcaaatttgcacatgttaaaaaatttaaaatggtaattttgtcttgaaatttgttcattttatattaaatatgtagttttttaatga 31567592  T
Q  225 ataatt 230  Q
    ||||||    
T  31567593 ataatt 31567598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 4047591 - 4047504
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatat 209  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||||||||  |||   ||| ||||||||| |||| ||||||||||    
T  4047591 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatat 4047504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 13515925 - 13516027
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| || ||||||||| | ||||| || |||||||| | | |||| | ||||||||| | |||| | ||||||||| ||||||||||||    
T  13515925 ggtttttctatcatgtgtaaatttgcacatgttaacaaatttaaagtggaaagtttatcttgaaacttatatattctatattaaatagataattttttaa 13516024  T
Q  222 taa 224  Q
    |||    
T  13516025 taa 13516027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 26265073 - 26265155
Alignment:
Q  152 gttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    ||||| ||||||||| ||| |  ||||||||||||||||| |||||  ||||||||||| || |||| |||||||||||||||    
T  26265073 gttaagaagtttaaaatagaagttttgtattgaaacttgtatatttaatattaaatataaaacttttaaataaataattgttg 26265155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 212
Target Start/End: Original strand, 23995416 - 23995505
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||||| || |||||||||| | | ||||| ||||||||| |||||  ||| |||||||||||||  ||||| |||||||||||||    
T  23995416 gtttttctattatgtgcaaatttgtacatgttaagaagtttaaaatagtaattttatattgaaacttgtacattttgtattaaatatata 23995505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 219
Target Start/End: Complemental strand, 35469732 - 35469636
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataatttttt 219  Q
    ||||||||||||| || ||||||||| | ||||| || |||||| ||||| | || ||||| |||| || |||||| |||||||||||||| |||||    
T  35469732 gtttttctatcatgtgtaaatttgcacatgttaaaaaatttaaaatagtaagcttttattggaactagtttattttatattaaatatataacttttt 35469636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 3737874 - 3737987
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtag---tatgtttgtattgaaacttgtgtattt-tctattaaatatataatttttta 220  Q
    |||||| ||||||| ||||||||| | ||||||||||||||| |||   | | |||||||||||| |||| |||||   ||||||||||| || |||| |    
T  3737874 ttttctttcatatgtaaatttgcacatgttaataagtttaaaatagaaatttttttgtattgaaagttgtatatttaaatattaaatataaaacttttga 3737973  T
Q  221 ataaataattgttg 234  Q
    ||||||||||||||    
T  3737974 ataaataattgttg 3737987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 15837453 - 15837346
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||||| ||||||| ||   ||||| ||   |||| |||||  |||||||||||||||||| ||||| |||||||||||  |  |||||||    
T  15837453 gtttttctatcatatccaaatttacacttgttaagaaaactaaaatagtaaatttgtattgaaacttgtgcattttatattaaatataatacattttaat 15837354  T
Q  223 aaataatt 230  Q
    ||||||||    
T  15837353 aaataatt 15837346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 28630056 - 28629946
Alignment:
Q  124 tttttctatcata-tgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||  |||||||||||| | | ||| |||||||||||| ||| |||   |||| |||||||| |||| |||||||||| |||  |||||||    
T  28630056 tttttctatcatcgtgcaaatttgcacatgataagaagtttaaagtaatatctttaacttgagacttgtgttttttatattaaatatgtaa-cttttaat 28629958  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  28629957 aaataattgttg 28629946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 31365950 - 31366060
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||| | | ||||| ||||||||| |||||  ||||  ||| ||||||||| |||| |||||||||| |||   ||||||    
T  31365950 gtttttctatcatgtgcaaatttgtacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaa-catttaat 31366048  T
Q  223 aaataattgttg 234  Q
     |||||||||||    
T  31366049 caataattgttg 31366060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 39990039 - 39990148
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    |||||| |||||| || |||| |||| | ||||| ||||||||| || || |||||| |||||||||||| |||||||||||||||||   ||||||| |    
T  39990039 gtttttttatcatgtgtaaatgtgcacatgttaa-aagtttaaa-taataagtttgtcttgaaacttgtgcattttctattaaatataactttttttatt 39990136  T
Q  223 aaataattgttg 234  Q
    | ||||||||||    
T  39990137 agataattgttg 39990148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 209
Target Start/End: Original strand, 14466495 - 14466580
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatat 209  Q
    |||||||||||| |||||||||  | | ||||| |||||||||||||||  |||   ||||||||||||| |||| ||||||||||    
T  14466495 tttttctatcatgtgcaaatttagacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatat 14466580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 12332514 - 12332426
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  12332514 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 12332426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 31613150 - 31613238
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  31613150 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 31613238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 31705106 - 31705018
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  31705106 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 31705018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 40454238 - 40454150
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  40454238 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 40454150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 40513126 - 40513018
Alignment:
Q  126 tttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaa 225  Q
    |||||||||| | |||||||||| | ||||| || |||||| |||||  |||| |||| || |||  |||||| ||| |||||||||| |||||  ||||    
T  40513126 tttctatcatgtacaaatttgcacatgttaaaaaatttaaaatagtaactttgcattggaatttgaatattttgtatcaaatatataactttttgttaaa 40513027  T
Q  226 taattgttg 234  Q
    |||||||||    
T  40513026 taattgttg 40513018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 18150563 - 18150484
Alignment:
Q  152 gttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattg 231  Q
    ||||| ||||||||| |||||  ||||  ||  ||||||| |||||| ||||||||||||||  ||||||||||||||||    
T  18150563 gttaagaagtttaaaatagtaattttgcgttagaacttgtatattttgtattaaatatataacattttaataaataattg 18150484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 38994126 - 38994184
Alignment:
Q  174 gtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgtt 233  Q
    ||||||||||||| |||| |||||| || |||||||||||  ||||||||||||||||||    
T  38994126 gtttgtattgaaatttgtatattttatagtaaatatataa-cttttaataaataattgtt 38994184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 7162981 - 7162910
Alignment:
Q  161 tttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    |||||| ||||| ||||| ||||||||||||  ||||| ||||||||| |||  | ||||||||||||||||||    
T  7162981 tttaaaatagtaagtttgaattgaaacttgttcattttatattaaatacata--tatttaataaataattgttg 7162910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 12641993 - 12642079
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatat 209  Q
    |||||||||| || |||||||||||| | ||||| ||||||||| || ||  ||||  ||| ||||||||| |||| ||||||||||    
T  12641993 gtttttctataatgtgcaaatttgcacatgttaagaagtttaaattaataactttgatttggaacttgtgttttttatattaaatat 12642079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 13761809 - 13761759
Alignment:
Q  162 ttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    ||||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  13761809 ttaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 13761759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 233
Target Start/End: Complemental strand, 15191034 - 15190941
Alignment:
Q  140 aaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtg-tattttctattaaatatataattttttaataaataattgtt 233  Q
    ||||||||| | ||||| |||||||||||||||  ||||  |||||||||||| | |||| |||||||||| |||  ||||||| ||||||||||    
T  15191034 aaatttgcacatgttaagaagtttaaagtagtaattttgacttgaaacttgtgtttttttatattaaatatgtaa-cttttaatcaataattgtt 15190941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 36474637 - 36474734
Alignment:
Q  131 atcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataat 229  Q
    ||||| |||||| ||||| |  |||| ||||||||| ||| |  ||||||||||||||||| |||||  ||||||||||| | ||||| ||||||||||    
T  36474637 atcatgtgcaaaattgcacatattaaaaagtttaaaatagaaattttgtattgaaacttgtatatttaatattaaatata-attttttgaataaataat 36474734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 10665003 - 10665072
Alignment:
Q  161 tttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataatt 230  Q
    |||||| | ||| |||||| ||| ||||||||||||   |||||||| ||||| ||||||||||||||||    
T  10665003 tttaaaatggtaagtttgtcttggaacttgtgtattgcatattaaatttataactttttaataaataatt 10665072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 11249996 - 11250068
Alignment:
Q  162 ttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    ||||| |||||  |||| |||||||| |||  ||||| ||||||| ||||||||| ||| |||||||||||||    
T  11249996 ttaaaatagtaactttgcattgaaacatgtacattttgtattaaacatataatttattactaaataattgttg 11250068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 6e-23; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 46492343 - 46492454
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| ||||||||| || ||||||| || ||||||||||||  |||| ||||||||||||  ||||| |||||||||||||| |  |||||    
T  46492343 gtttttctatcatgtgcaaattttcacacgttaagaaatttaaagtagtaactttgcattgaaacttgtacattttgtattaaatatataactcgttaat 46492442  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  46492443 aaataattgttg 46492454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 7940969 - 7940863
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||||||||||||| ||| |||||| || |||||| | |||  ||||| ||| ||||| |||||||| |||||||||||||| |||||||||    
T  7940969 tttttctatcatatgcaaatttacatgcgttaagaaatttaaaatggtaaatttgtcttgtaacttctgtattttatattaaatatataactttttaata 7940870  T
Q  224 aataatt 230  Q
    |||||||    
T  7940869 aataatt 7940863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 23803049 - 23803157
Alignment:
Q  126 tttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaa 225  Q
    ||||||||||||||||||||||| | ||||| ||||||||| ||| |  |||| |||| ||||||| |||||  ||||||||||| || |||| ||||||    
T  23803049 tttctatcatatgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtatatttcatattaaatataaaacttttgaataaa 23803148  T
Q  226 taattgttg 234  Q
    |||||||||    
T  23803149 taattgttg 23803157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 13495472 - 13495361
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| || ||||||||| | | ||| |||||||||||||||  ||||  ||| |||||||| ||||| |||||||||| ||  ||||||||    
T  13495472 gtttttctatcatgtgaaaatttgcacatgataagaagtttaaagtagtaattttgacttggaacttgtgcattttatattaaatatgtaggtttttaat 13495373  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  13495372 aaataattgttg 13495361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 2571447 - 2571335
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  |||| |||| ||||||   ||||| |||||||||||||| |||||      
T  2571447 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgt 2571348  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  2571347 taaataattgttg 2571335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 10307945 - 10307833
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  |||| |||| ||||||   ||||| |||||||||||||| |||||      
T  10307945 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaaatttgcattggaacttgaacattttgtattaaatatataactttttgt 10307846  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  10307845 taaataattgttg 10307833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 26486435 - 26486487
Alignment:
Q  181 ttgaaacttgtgtattttctattaaatatataattttttaataaataattgtt 233  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  26486435 ttgaaacttgtgtattttatattaaatatatagttttttaataaataattgtt 26486487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 51567821 - 51567928
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| |||||||||||| | |||||   ||||||| ||| |  |||||||||||||||||  |||| |||||||||||| || |||| ||||    
T  51567821 tttttctatcatgtgcaaatttgcacatgttaa---gtttaaaatagaaattttgtattgaaacttgtacatttactattaaatataaaacttttgaata 51567917  T
Q  224 aataattgttg 234  Q
    |||||||||||    
T  51567918 aataattgttg 51567928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 11611088 - 11610982
Alignment:
Q  127 ttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaat 226  Q
    ||||||||| |||||||||||| | | ||| |||||||||||||||  ||||  ||| ||||||||| |||| |||||||||| |||  |||||||||||    
T  11611088 ttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaa-cttttaataaat 11610990  T
Q  227 aattgttg 234  Q
    ||||||||    
T  11610989 aattgttg 11610982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 23638050 - 23638157
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    ||||| ||||||  ||||||||||| | ||||| || |||||| | ||| ||| || |||||||||||||||||| ||||||||||| || |||||| ||    
T  23638050 tttttatatcatgagcaaatttgcacatgttaagaaatttaaaatggtaagttagtcttgaaacttgtgtattttatattaaatatacaactttttatta 23638149  T
Q  224 aataattg 231  Q
    ||||||||    
T  23638150 aataattg 23638157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 14847041 - 14847107
Alignment:
Q  164 aaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataatt 230  Q
    ||||||||| |||||||||| |||||||||||||| |||| ||||||||| |||| |||||||||||    
T  14847041 aaagtagtaagtttgtattgtaacttgtgtattttatattgaatatataaattttaaataaataatt 14847107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 38389626 - 38389520
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||||| |||  ||||  ||| |||||||| ||||  |||||||||| ||  |||||||    
T  38389626 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaa 38389527  T
Q  222 taaataa 228  Q
    |||||||    
T  38389526 taaataa 38389520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 51618226 - 51618117
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| |||||| || | |||  |||| |||| |||||||  ||||| |||||||||||||   ||||||    
T  51618226 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttcaaattgtaactttgcattggaacttgtacattttgtattaaatatata---ttttaa 51618130  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  51618129 taaataattgttg 51618117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 232
Target Start/End: Original strand, 13879808 - 13879916
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||||||||| |||||||| ||||| ||| |||||  |||| | |||||||||||| |||  ||||  |||||||||| ||  ||||||||    
T  13879808 gtttttctatcatatgcaagtttgcatatgttaagaag-ttaaaaaagtaaggttgtattgaaacctgttcatttaatattaaatatgtatatttttaat 13879906  T
Q  223 aaataattgt 232  Q
    ||||||||||    
T  13879907 aaataattgt 13879916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 233
Target Start/End: Original strand, 37055367 - 37055476
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| || ||||||||| |  |||| ||||||||| |||||   |||||| | ||||||||| |||| |||||| |||| || |||||||||    
T  37055367 tttttctatcatgtgaaaatttgcacatattaagaagtttaaaatagtaaagttgtatcggaacttgtgttttttatattaactataaaactttttaata 37055466  T
Q  224 aataattgtt 233  Q
    ||||||||||    
T  37055467 aataattgtt 37055476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 3863508 - 3863421
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatat 209  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||||||||  |||   ||| ||||||||| |||| ||||||||||    
T  3863508 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttagcttggaacttgtgttttttatattaaatat 3863421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 16875024 - 16875111
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatat 209  Q
    |||||||||||| | |||||||||||| | ||||| |||||||||||||||  |||   ||||||||||||| |||| ||||||||||    
T  16875024 ggtttttctatcgtgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatat 16875111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 20938235 - 20938125
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtg-tattttctattaaatatataattttttaa 221  Q
    ||||||||||||| |||||||||||| | | ||| |||||||||||||||  ||||  ||| |||||||| | |||| |||||||||| ||| |||||||    
T  20938235 gtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttttatattaaatatgtaa-tttttaa 20938137  T
Q  222 taaataattgtt 233  Q
    | ||||||||||    
T  20938136 tcaataattgtt 20938125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 33474473 - 33474584
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| | ||||| ||||||| | | | |  |||| ||||||| || |  ||||| || |||||||||||||||| |||    
T  33474473 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaat 33474572  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  33474573 aaataattgttg 33474584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 35414809 - 35414920
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| ||||||||| || | ||||| ||||| ||| |||||  ||| ||||| || |||| |||||| |||| ||||||||| |||| ||     
T  35414809 gtttttctatcatgtgcaaatttacacatgttaagaagttcaaaatagtaactttatattggaagttgtatattttgtatttaatatataacttttgaac 35414908  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  35414909 aaataattgttg 35414920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 38786058 - 38785947
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||||| |||| ||||||  ||||| ||||||||| ||| |  ||||||||| |||||||   |||| ||||||||||| || |||  |||    
T  38786058 gtttttctatcatatccaaacttgcatgagttaagaagtttaaaatagaaattttgtattggaacttgtacgttttatattaaatataaaactttcaaat 38785959  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  38785958 aaataattgttg 38785947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 45983685 - 45983574
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||| |||||| |||||||||||| | ||||| ||||||||| ||| |  ||| |||||||||||||  ||||  |||||||||||| | |||| ||    
T  45983685 ggtttttttatcatgtgcaaatttgcacaggttaagaagtttaaaatagaaattttatattgaaacttgtacatttaatattaaatatattacttttgaa 45983586  T
Q  222 taaataattgtt 233  Q
     |||||||||||    
T  45983585 caaataattgtt 45983574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 50204582 - 50204471
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| ||| |  ||||||||| ||| |||  ||||  ||||||||||| || |||| ||    
T  50204582 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacctgtacatttaatattaaatataaaacttttgaa 50204483  T
Q  222 taaataattgtt 233  Q
    || |||||||||    
T  50204482 tatataattgtt 50204471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 43637428 - 43637370
Alignment:
Q  46 acactctctttcatatagggtgaacttactaaaatgtcatttcaaatagggtgtataat 104  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||| || |||||||||||    
T  43637428 acactctcttttatatggggtgaaattactaaaatgtcatttcacatggggtgtataat 43637370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 54320720 - 54320789
Alignment:
Q  162 ttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgt 232  Q
    |||||||||||||| | |||||||| |||||| |||| |||| ||||||||||||||||| ||||||||||    
T  54320720 ttaaagtagtatgtatatattgaaatttgtgtgttttatatt-aatatataattttttaaaaaataattgt 54320789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 12515473 - 12515585
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| || ||||||||| | ||||| || |||||| |||||  |||| || | ||||||   ||||| |||||||||||||| |||||      
T  12515473 ggtttttctatcatgtgtaaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatatataactttttgt 12515572  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  12515573 taaataattgttg 12515585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 23320196 - 23320140
Alignment:
Q  175 tttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattg 231  Q
    ||||| |||||||| ||||||||| |||||||||||||  |||||||||||||||||    
T  23320196 tttgtcttgaaactcgtgtattttatattaaatatatatctttttaataaataattg 23320140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 29686499 - 29686388
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| |||||||||||||||  |||   ||  ||||||||| |||| ||||| |||||| |  ||||||    
T  29686499 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtgttttttatattacatatat-agcttttaa 29686401  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  29686400 taaataattgttg 29686388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 23523125 - 23523038
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatat 209  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||||| |||  ||||  ||| |||||||| ||||  ||||||||||    
T  23523125 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatat 23523038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 9247912 - 9247817
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||| |||||||||||||| ||||| | | ||||| |||||  |  || |||||| ||||  ||||| |||||||||||||||||||||||    
T  9247912 ttttctatcatgtgcaaatttgcatatgttaaaatgattaaaatagtagct--gttttgaaatttgtaaattttatattaaatatataattttttaat 9247817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 36426408 - 36426514
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| || |||||| || | ||||| ||||||||||| |||  ||||  ||| |||||||| ||||  |||||||||| ||  |||||||    
T  36426408 ggtttttctatcatgtgtaaatttacacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaa 36426507  T
Q  222 taaataa 228  Q
    |||||||    
T  36426508 taaataa 36426514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 37332290 - 37332196
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttt 218  Q
    ||||| ||| || ||||||||| || | ||| |||| |||||| | ||| |||||| || ||| ||||||||||| |||||||||||||||||||    
T  37332290 tttttttattatgtgcaaatttacacatgttgataaatttaaaatggtaagtttgtctttaaatttgtgtattttatattaaatatataattttt 37332196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 40497224 - 40497114
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| |||||||||||| | | ||| |||||||||||||||  |||   ||  |||||||| ||||| |||||| ||| ||  |||||||||    
T  40497224 tttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtgcattttatattaactatgtagatttttaata 40497125  T
Q  224 aataattgttg 234  Q
    | |||||||||    
T  40497124 attaattgttg 40497114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 42180229 - 42180123
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| || ||||||||| | ||||| ||||||||| ||  |  ||||||||| |||||||  ||||  ||||||||||| || |||| ||||    
T  42180229 tttttctatcatgtgtaaatttgcacatgttaagaagtttaaaataaaaattttgtattggaacttgtacatttaatattaaatataaaacttttaaata 42180130  T
Q  224 aataatt 230  Q
    |||||||    
T  42180129 aataatt 42180123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 48517479 - 48517585
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    ||||| |||||| |||||| ||| |||  |||| ||||| |||||||||  ||| | || |||||| |  ||||| |||||||||||||||||| |||||    
T  48517479 tttttgtatcatgtgcaaacttgaataaattaaaaagttaaaagtagtaaatttatcttcaaacttatacattttatattaaatatataattttataata 48517578  T
Q  224 aataatt 230  Q
    |||||||    
T  48517579 aataatt 48517585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 54527707 - 54527817
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    ||||||||| || |||||||||||| | ||||| || |||||| ||  |  ||||||||| |||||||  ||||  ||||||||||| || |||| ||||    
T  54527707 tttttctattatgtgcaaatttgcacatgttaagaaatttaaaatataaattttgtattggaacttgtacatttaatattaaatataaaacttttgaata 54527806  T
Q  224 aataattgttg 234  Q
    |||||||||||    
T  54527807 aataattgttg 54527817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 232
Target Start/End: Original strand, 8497421 - 8497529
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    ||||||||||||||| |||||||   | ||||| || |||||| | |||  |||| |||||||||||| | |||| |||| |||| |||| |||||||||    
T  8497421 tttttctatcatatgtaaatttggccatgttaaaaactttaaaattgtaattttgcattgaaacttgtatgttttatatttaataaataagtttttaata 8497520  T
Q  224 aataattgt 232  Q
    | |||||||    
T  8497521 attaattgt 8497529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 9711119 - 9711011
Alignment:
Q  126 tttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaa 225  Q
    |||||| ||| |||||||||||||| ||||| ||||| ||| || ||  || | |||| ||||||| |||||| || | |||| |||| |||||||| ||    
T  9711119 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaataatacattcgcattggaacttgtatattttgtaattaatacataaatttttaattaa 9711020  T
Q  226 taattgttg 234  Q
    |||||||||    
T  9711019 taattgttg 9711011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 24657664 - 24657608
Alignment:
Q  177 tgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgtt 233  Q
    |||||||||| ||||  ||||| ||||||||||||||  ||||||||||||||||||    
T  24657664 tgtattgaaatttgtacattttatattaaatatataaaattttaataaataattgtt 24657608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 29932353 - 29932441
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  29932353 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 29932441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 29981507 - 29981595
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  29981507 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 29981595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 51401619 - 51401507
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||||||| || | |||||||||| | ||||| ||||||||| ||| |  ||||||||| |||||||  ||||  ||||||||||| ||  ||  ||    
T  51401619 ggtttttctattatgtacaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaaaattcaaa 51401520  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  51401519 taaataattgttg 51401507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 30472935 - 30473002
Alignment:
Q  168 tagtatgtttgtattgaaacttgtgtattttctattaaatatata-attttttaataaataattgttg 234  Q
    ||||| |||||||||  |||||||||||||| |||||||| ||||  ||||||||||||| |||||||    
T  30472935 tagtaagtttgtattataacttgtgtattttatattaaatgtatatcttttttaataaatgattgttg 30473002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 32321776 - 32321819
Alignment:
Q  175 tttgtattgaaacttgtgtattttctattaaatatataattttt 218  Q
    ||||||||||||| |||||||||  |||||||||||||||||||    
T  32321776 tttgtattgaaacatgtgtatttcatattaaatatataattttt 32321819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 39364872 - 39364955
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaata 208  Q
    ||||| ||||| |||||||||||| | ||||| |||||| || |||||  ||||| ||| |||||||| ||||| |||||||||    
T  39364872 ttttcaatcatttgcaaatttgcacatgttaacaagttttaaatagtaactttgtcttgtaacttgtgcattttatattaaata 39364955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 49396559 - 49396468
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataa 213  Q
    |||||||||| ||| |||||||||| | |  |||| |||||||||||||||  |||| ||| ||| || || ||||| ||||||||||||||    
T  49396559 ggtttttctaccatgtgcaaatttgtacatattaagaagtttaaagtagtaaatttgaattaaaatttatgcattttatattaaatatataa 49396468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 2379124 - 2379182
Alignment:
Q  175 tttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgtt 233  Q
    |||| ||| |||||||| |||||| |||| ||||||| | |||||||||||||||||||    
T  2379124 tttgcattaaaacttgtatattttgtatttaatatatgactttttaataaataattgtt 2379182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 2566661 - 2566575
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaata 208  Q
    |||||||||||||| ||||||||| || | ||||  || |||||| |||||  |||||||||||||||||  ||||| |||| ||||    
T  2566661 ggtttttctatcatgtgcaaatttacacatgttagaaaatttaaaatagtaattttgtattgaaacttgtacattttgtattgaata 2566575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 11611155 - 11611105
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagta 172  Q
    |||||||||||||| |||||||||||| | | ||| |||||||||||||||    
T  11611155 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagta 11611105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 19346223 - 19346181
Alignment:
Q  176 ttgtattgaaacttgtgtattttctattaaatatataattttt 218  Q
    |||||| |||||||||||||||| |||||||||||||| ||||    
T  19346223 ttgtatagaaacttgtgtattttatattaaatatataaatttt 19346181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 224
Target Start/End: Original strand, 54026952 - 54027034
Alignment:
Q  143 tttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataat-tttttaataa 224  Q
    |||||| | ||||| || |||||| |||||  ||| ||||||||||||||||||||  |||||||||||| | ||||||||||    
T  54026952 tttgcaaatgttaagaaatttaaaatagtaaatttatattgaaacttgtgtattttacattaaatatatattctttttaataa 54027034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 46845144 - 46845217
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattt 197  Q
    |||||||||||| |||||||||| | | ||||| ||||| |||   ||||||||| ||||||||||||| ||||    
T  46845144 tttttctatcatgtgcaaatttgtacatgttaagaagttcaaaagggtatgtttgcattgaaacttgtgcattt 46845217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 32553545 - 32553453
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataat 214  Q
    |||||||||||||| || |||||| || | ||||| ||||||||| || ||  |||   ||||||||||||| |||| |||||||||| ||||    
T  32553545 ggtttttctatcatgtgtaaatttacacatgttaagaagtttaaattaataactttaatttgaaacttgtgttttttatattaaatatgtaat 32553453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 46492279 - 46492315
Alignment:
Q  194 attttctattaaatatataattttttaataaataatt 230  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  46492279 attttgtattaaatatataactttttaataaataatt 46492315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 50364333 - 50364258
Alignment:
Q  158 aagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    |||||||||||||||  ||||  ||| ||||||||| |||| |||||||||| |||  ||||||| |||||||||||    
T  50364333 aagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaa-cttttaatcaataattgttg 50364258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 12132162 - 12132052
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||| ||||| | ||||| || |||||||||||| |||||||||| ||||||   ||||| |||||||||||||| |||||||    
T  12132162 ggtttttctatcatctgcaaacttgcacatgttaagaaatttaaagtagtaagtttgtattggaacttgaacattttatattaaatatataactttttaa 12132063  T
Q  222 taaataattgt 232  Q
    |||||| ||||    
T  12132062 taaatacttgt 12132052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 34741666 - 34741772
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    ||||||||||||||| |||||||   | ||||| ||||||||| || || |||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  34741666 tttttctatcatatgtaaatttgttcatgttaaaaagtttaaaataataagtttgtattagaacttgtgcattttatattaaatatataattttttaata 34741765  T
Q  224 aataatt 230  Q
    |||||||    
T  34741766 aataatt 34741772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 14961662 - 14961771
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| ||||||||| |||||  ||||||||| |||||||| |||||  ||||||||| ||| |||||||    
T  14961662 ggtttttctatcatgtgcaaatttgcacatgctaagaagtttaaaatagtaattttgtattggaacttgtgcattttaaattaaatatttaactttttaa 14961761  T
Q  222 taaataattg 231  Q
    ||||| ||||    
T  14961762 taaatgattg 14961771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 26682247 - 26682135
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || ||||||||||||  ||||  ||| |||||||| ||||| |||||||| | ||  |||||||    
T  26682247 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatgtgtagctttttaa 26682148  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  26682147 taaataattgttg 26682135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 28014857 - 28014969
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| ||| |  ||||||||| |||||||  ||||  ||||||||||| || |||| ||    
T  28014857 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaa 28014956  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  28014957 taaataattgttg 28014969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 35678274 - 35678385
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||| |||||| |||||||||||| | | ||| |||||||||||||||  ||||  |||||||||||||| ||| |||||||||| ||| |||||||    
T  35678274 ggtttttttatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgta-tttatattaaatatgtaaatttttaa 35678372  T
Q  222 taaataattgttg 234  Q
    ||| |||||||||    
T  35678373 taattaattgttg 35678385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 6818196 - 6818085
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||| | | ||||| ||||||||| |||||   |||||| | |||||||| ||||| |||||| |||| || |||||||    
T  6818196 ggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataaaactttttaa 6818097  T
Q  222 taaataattgtt 233  Q
    ||||||||||||    
T  6818096 taaataattgtt 6818085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 7393247 - 7393352
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataa 224  Q
    |||| |||||| ||| |||||||| | ||||| || |||||| |||||  ||||| ||| |||||||||||||| |||||||||||||| ||||||||||    
T  7393247 ttttttatcatgtgcgaatttgcacatgttaaaaaatttaaaatagtaa-tttgtcttgtaacttgtgtattttatattaaatatataactttttaataa 7393345  T
Q  225 ataattg 231  Q
    |||||||    
T  7393346 ataattg 7393352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 20514809 - 20514703
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataa 224  Q
    ||||||||||| |||| ||||||| | ||||| || |||||| | ||| |||||| ||| |||||||  ||||| |||||||||||||| ||||||||||    
T  20514809 ttttctatcatgtgcatatttgcacaggttaagaaatttaaaatggtaagtttgtcttggaacttgtacattttatattaaatatataactttttaataa 20514710  T
Q  225 ataattg 231  Q
    |||||||    
T  20514709 ataattg 20514703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 44091494 - 44091385
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataa 224  Q
    ||||||||||| || ||||||||||| ||||| || ||||||||||||  ||||  ||  |||||||| ||||| |||||||| | || |||||||||||    
T  44091494 ttttctatcatgtgtaaatttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaatttgtagttttttaataa 44091395  T
Q  225 ataattgttg 234  Q
    ||||||||||    
T  44091394 ataattgttg 44091385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 3306054 - 3306166
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  |||| |||||||||||   ||||| ||| |||||||||| |||||      
T  3306054 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtatcaaatatataactttttgt 3306153  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  3306154 taaataattgttg 3306166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 9801847 - 9801736
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||| ||||| |||||||||||| | ||||| |||||||||||||||  ||||  ||||||||| ||| | || ||||||||||||||  ||||||    
T  9801847 ggtttttcaatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttgaaacttatgtttgttatattaaatatataa-cttttaa 9801749  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  9801748 tcaataattgttg 9801736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 14816125 - 14816236
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| || ||||||||||||  ||||  || ||||||||||| ||| |||||||||| ||| |||||||    
T  14816125 ggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtgta-tttatattaaatatgtaaatttttaa 14816223  T
Q  222 taaataattgttg 234  Q
    ||| |||||||||    
T  14816224 taattaattgttg 14816236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 14829615 - 14829504
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| || ||||||||||||  ||||  || ||||||||||| ||| |||||||||| ||| |||||||    
T  14829615 ggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtgta-tttatattaaatatgtaaatttttaa 14829517  T
Q  222 taaataattgttg 234  Q
    ||| |||||||||    
T  14829516 taattaattgttg 14829504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 27874680 - 27874792
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| ||  |  ||||||||| |||||||  ||||  ||||||||||| || |||| ||    
T  27874680 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatacaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaa 27874779  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  27874780 taaataattgttg 27874792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 218
Target Start/End: Original strand, 39701802 - 39701898
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttt 218  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||||||||  ||||  |||||| |||||| |||| |||||||||| ||| ||||    
T  39701802 ggtttttctatcatgtgcaaatttgcacatgttaacaagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaatatgtaactttt 39701898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 9022215 - 9022106
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtg---tattttctattaaatatataatttttta 220  Q
    ||||| |||||||  ||||||| || | ||||| |||||||||||| ||| ||||||||| ||||||||   | |||| |||||||||||||| ||||||    
T  9022215 tttttttatcataaacaaatttacacatgttaaaaagtttaaagtaatatatttgtattgtaacttgtgcatttttttttattaaatatataacttttta 9022116  T
Q  221 ataaataatt 230  Q
    ||||||||||    
T  9022115 ataaataatt 9022106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 13327942 - 13328051
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| |||||||||||| | ||||| ||||||||| |||||  ||||  ||||||||||||| |||| |||||||||| |||   ||||||     
T  13327942 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaa-catttaatc 13328040  T
Q  224 aataattgttg 234  Q
    |||||||||||    
T  13328041 aataattgttg 13328051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 2161566 - 2161454
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  |||| |||| ||||||   |||||  ||||||||||||| |||||      
T  2161566 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgaattaaatatataactttttgt 2161467  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  2161466 taaataattgttg 2161454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 7140458 - 7140569
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| |  |||| |||||||||||||||  |||   ||| ||||||||| |||| |||||||||| | | |||||||    
T  7140458 ggtttttctatcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgt-agtttttaa 7140556  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  7140557 tcaataattgttg 7140569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 9580108 - 9580220
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||| |||||| ||||||||| || | ||||| ||||||||| ||| |  |||||||||||||||||  ||||  |||||||||||   ||||| ||    
T  9580108 ggtttttttatcatgtgcaaatttacacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataatttttttgaa 9580207  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  9580208 taaataattgttg 9580220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 10129282 - 10129171
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||||||||  |||   ||| ||||||||| |||| |||||||||| | |  ||||||    
T  10129282 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgt-agcttttaa 10129184  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  10129183 tcaataattgttg 10129171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 12189587 - 12189699
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| ||||||||| ||| |  ||| ||||| |||||||  ||||  ||||||||||| | ||||| ||    
T  12189587 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatataaattttttgaa 12189686  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  12189687 taaataattgttg 12189699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 12434015 - 12434127
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| ||||||||| ||| |  ||| ||||| |||||||  ||||  ||||||||||| | ||||| ||    
T  12434015 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatataaattttttgaa 12434114  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  12434115 taaataattgttg 12434127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 32089465 - 32089577
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata-atttttta 220  Q
    ||||||||||| ||||||||||||||| | |||||  |||||||| ||||| | || ||| |||||||||| | ||| ||||| |||| || | ||||||    
T  32089465 ggtttttctattatatgcaaatttgcacatgttaagcagtttaaaatagtaagattttatcgaaacttgtgcactttatattatatatgtataattttta 32089564  T
Q  221 ataaataattgtt 233  Q
    |||||||||||||    
T  32089565 ataaataattgtt 32089577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 35583509 - 35583434
Alignment:
Q  158 aagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    ||||||||| || || ||||  ||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||    
T  35583509 aagtttaaaatattaagtttacattgaaacttgtgtattttgtattaaatatataat-ttttaacaaataattgttg 35583434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 39024856 - 39024968
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | | ||| |||||||||||||||  ||||  ||| || ||||| ||||| |||||| ||| ||  |||||||    
T  39024856 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgcattttatattaactatgtagatttttaa 39024955  T
Q  222 taaataattgttg 234  Q
    ||| |||||||||    
T  39024956 taattaattgttg 39024968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 45006148 - 45006037
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||||||||||| ||||||||||| | ||||| ||||||||| ||| || ||||||||| ||| |||  || |  ||||||||||| || |||| ||    
T  45006148 ggtttttctatcataagcaaatttgcacatgttaagaagtttaaaatagaat-tttgtattggaacatgtacatctaatattaaatataaaacttttgaa 45006050  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  45006049 taaataattgttg 45006037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 7978057 - 7977990
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaactt 189  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||| | |||  |||||||||||||||    
T  7978057 ggtttttctatcatatgcaaatttgcaaatgttaaaaagtttaaaatggtaattttgtattgaaactt 7977990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 40225987 - 40226098
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| | ||||| ||||||| | | | |  |||| ||||||| || |  ||||| || |||||||||||||||| |||    
T  40225987 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaat 40226086  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  40226087 aaataattgttg 40226098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 233
Target Start/End: Original strand, 4080395 - 4080503
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| |||||||||||| | | ||| || ||||||||||||  ||||  |||||||||||| | ||| |||||||||| ||| |||||| ||    
T  4080395 tttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagta 4080493  T
Q  224 aataattgtt 233  Q
    | ||||||||    
T  4080494 attaattgtt 4080503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 18567415 - 18567526
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| |||||  ||||  ||| ||| ||||| |||| |||||||||| |||   |||||    
T  18567415 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttggaacatgtgttttttatattaaatatgtaa-catttaa 18567513  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  18567514 tcaataattgttg 18567526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 26363989 - 26364101
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||  | ||||| || |||||| |||||  |||| |||| ||||||   |||||||||||| | ||||| |||||      
T  26363989 ggtttttctatcatgtgcaaatttgcgcatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttctattaattgtataactttttgt 26364088  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  26364089 taaataattgttg 26364101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 36967077 - 36967181
Alignment:
Q  130 tatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataat 229  Q
    |||||| |||||||||||| | ||||| ||||||||| ||| |  ||||||||||||||||   ||||  ||||||||||| || |||| |||| |||||    
T  36967077 tatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaactttgtattgaaacttgcacatttaatattaaatataaaacttttgaatatataat 36967176  T
Q  230 tgttg 234  Q
    |||||    
T  36967177 tgttg 36967181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 38212944 - 38213052
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| | ||||| ||||||||| ||| |  ||| |||||||||||||  || |  ||||||||||| || |||| |||    
T  38212944 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattgaaacttgtacatgtaatattaaatataaaacttttaaat 38213043  T
Q  223 aaataattg 231  Q
     ||||||||    
T  38213044 gaataattg 38213052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 1203780 - 1203693
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatat 209  Q
    |||||||||||||| |||||||||||| | | ||| |||||||||||||||  ||||  |  |||||||||| |||| ||||||||||    
T  1203780 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaattttgattaaaaacttgtgttttttatattaaatat 1203693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 28869513 - 28869572
Alignment:
Q  175 tttgtattgaaacttgtgtattttct-attaaatatataattttttaataaataattgtt 233  Q
    |||||||| ||||||||| ||||| | ||||||||||||||||||||||||||| |||||    
T  28869513 tttgtattaaaacttgtgaatttttttattaaatatataattttttaataaatagttgtt 28869572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 29642782 - 29642679
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtg-tattttctattaaatatataatttttta 220  Q
    |||||||||||||| |||||||||||||| | |||  | |||||| | ||| |||||| |||||||||||| | |||| ||||||||| | || ||||||    
T  29642782 ggtttttctatcatgtgcaaatttgcatatgataaggaatttaaaatggtaagtttgtcttgaaacttgtgtttttttatattaaatagacaacttttta 29642683  T
Q  221 ataa 224  Q
    ||||    
T  29642682 ataa 29642679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 1844612 - 1844670
Alignment:
Q  175 tttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgtt 233  Q
    ||||||| |||| || |||||||| |||||||||| ||| |||||||||||||||||||    
T  1844612 tttgtatcgaaatttatgtattttatattaaatatttaactttttaataaataattgtt 1844670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 26834740 - 26834634
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| ||||||||||||||  |||| || |||||| | |||  ||||  ||| |||||||| ||||  |||||||||| ||  |||||||    
T  26834740 ggtttttctatcatgtgcaaatttgcatatattaagaaatttaaaatggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaa 26834641  T
Q  222 taaataa 228  Q
    |||||||    
T  26834640 taaataa 26834634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 31812292 - 31812186
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| |  |||| ||||||||| | |||  ||||  ||| |||||||| ||||  |||||||||| ||  |||||||    
T  31812292 ggtttttctatcatgtgcaaatttgcacatattaagaagtttaaaatggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaa 31812193  T
Q  222 taaataa 228  Q
    |||||||    
T  31812192 taaataa 31812186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 233
Target Start/End: Original strand, 4084544 - 4084652
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| |||||||||||| | | ||| || ||||||||||||  ||||  ||||||||| || | ||| |||||||||| ||| |||||| ||    
T  4084544 tttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttatgca-tttatattaaatatgtaaatttttagta 4084642  T
Q  224 aataattgtt 233  Q
    | ||||||||    
T  4084643 attaattgtt 4084652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 233
Target Start/End: Original strand, 4102851 - 4102959
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| |||||||||||| | | ||| || ||||||||||||  ||||  ||||||||| || | ||| |||||||||| ||| |||||| ||    
T  4102851 tttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttttgca-tttatattaaatatgtaaatttttagta 4102949  T
Q  224 aataattgtt 233  Q
    | ||||||||    
T  4102950 attaattgtt 4102959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 15198899 - 15198988
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatat 211  Q
    |||||||||||||| |||||||||||| | ||||| || ||| || |||||  |||| |||| ||||||| ||||||  |||||||||||    
T  15198899 ggtttttctatcatgtgcaaatttgcacatgttaaaaaattttaaatagtaactttgcattgtaacttgtatattttgaattaaatatat 15198988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 34249805 - 34249748
Alignment:
Q  174 gtttgtattgaaacttgtgtattttctattaaatatataa-ttttttaataaataatt 230  Q
    |||||| ||| |||||||||||||| |||||||||| ||| |||||||||||||||||    
T  34249805 gtttgtcttggaacttgtgtattttatattaaatatttaacttttttaataaataatt 34249748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 42195 - 42283
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||| ||| |||| ||||||||||||||||||||  ||||||||||||    
T  42195 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtggtaagtttatattgaaacttgtgtattttacattaaatatata 42283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 218
Target Start/End: Complemental strand, 297258 - 297178
Alignment:
Q  138 gcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttt 218  Q
    ||||||||||| | ||||| ||||||||| || ||  |||||||||||||||||  ||||| |||| ||||||||| ||||    
T  297258 gcaaatttgcacatgttaagaagtttaaaataataactttgtattgaaacttgtacattttgtatttaatatataactttt 297178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 8284567 - 8284679
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataat-ttttta 220  Q
    |||||||||||||| |||||||||| | | ||||| ||||||||| ||| |  || |  ||| |||||||||||||| |||||||||  |  | ||||||    
T  8284567 ggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaattagcaacttcgacttggaacttgtgtattttatattaaataggtggtcttttta 8284666  T
Q  221 ataaataattgtt 233  Q
    |||||||||||||    
T  8284667 ataaataattgtt 8284679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 10543630 - 10543718
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  10543630 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 10543718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 38843883 - 38843771
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| || ||||||||| | | ||| ||||||||| ||  |  ||| ||||| |||||||  ||||  ||||||||||| || |||| ||    
T  38843883 ggtttttctatcatgtgtaaatttgcacatgctaagaagtttaaaatataaattttttattggaacttgtacatttaatattaaatataaaacttttgaa 38843784  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  38843783 taaataattgttg 38843771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 42781651 - 42781563
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| |||||||||||||||||| |  ||||||||||||    
T  42781651 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattatacattaaatatata 42781563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 16445736 - 16445846
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    |||||||||| || |||||||||||| |  |||| ||||||||| ||| |  ||||||||| |||| ||  ||||  ||||||||||| || |||| |||    
T  16445736 gtttttctattatgtgcaaatttgcacatattaagaagtttaaaatagaaattttgtattggaact-gtacatttaatattaaatataaaacttttgaat 16445834  T
Q  223 aaataattgttg 234  Q
    ||||||||||||    
T  16445835 aaataattgttg 16445846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 26195259 - 26195349
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatac--gttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatat 211  Q
    ||||||||||||| || |||||| || ||  |||||||| ||||||||  |  |||||| |||||||||||| ||||| ||||||||||||    
T  26195259 gtttttctatcatgtgtaaatttacacacatgttaataaatttaaagtgatgagtttgtcttgaaacttgtgcattttatattaaatatat 26195349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 28866932 - 28866990
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtatt 182  Q
    |||||||||||| |||||||||| |||  |||| ||||||||| || ||||||||||||    
T  28866932 tttttctatcatgtgcaaatttgtatatattaagaagtttaaaataatatgtttgtatt 28866990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 32186363 - 32186321
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaa 166  Q
    |||||||||| | |||||||||||||| |||||||||||||||    
T  32186363 tttttctatcgtgtgcaaatttgcatatgttaataagtttaaa 32186321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 34107171 - 34107213
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaa 166  Q
    |||||||||||||||||||||| |||| ||||| |||||||||    
T  34107171 tttttctatcatatgcaaatttacatatgttaagaagtttaaa 34107213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 5573465 - 5573355
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||| | | ||||| ||||||||| || ||  |||| |||  ||||| |  ||||| ||||  |||||||| |||||||    
T  5573465 ggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaaataatacttttgcattagaacttatacattttgtatt--atatataactttttaa 5573368  T
Q  222 taaataattgttg 234  Q
    ||||| |||||||    
T  5573367 taaatgattgttg 5573355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 19343835 - 19343904
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgt 191  Q
    ||||||| |||||| |||||||||||| | ||||| | |||||||||||||  ||||  |||||||||||    
T  19343835 ggtttttttatcatgtgcaaatttgcacatgttaacacgtttaaagtagtaattttgacttgaaacttgt 19343904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 28869421 - 28869376
Alignment:
Q  153 ttaataagtttaaagtagtatgtttgtattgaaacttgtgtatttt 198  Q
    |||| |||||||||||| |||||||||||| ||||||||| |||||    
T  28869421 ttaagaagtttaaagtaatatgtttgtattaaaacttgtgaatttt 28869376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 31133955 - 31133907
Alignment:
Q  181 ttgaaacttgtgtattttctattaaatatataattttttaataaataatt 230  Q
    ||||||| |||||||||| ||||||||||| || ||||||||||||||||    
T  31133955 ttgaaacctgtgtattttatattaaatata-aactttttaataaataatt 31133907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 44222473 - 44222545
Alignment:
Q  161 tttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    |||||| | ||| |||||||| ||||| | |||||||| ||| |||||||||  ||||||||||||||||||||    
T  44222473 tttaaaattgtaagtttgtatggaaacgtatgtattttatat-aaatatatacatttttaataaataattgttg 44222545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 9744004 - 9743929
Alignment:
Q  158 aagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    |||||||||||||||  ||||  ||| ||||| ||| |||| |||||||||| |||  |||||||||||||||||||    
T  9744004 aagtttaaagtagtaactttgacttggaacttatgttttttatattaaatatgtaa-cttttaataaataattgttg 9743929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 13496709 - 13496757
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagt 171  Q
    ||||||||||||| |||||||||||| | ||||| ||||||||| ||||    
T  13496709 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagt 13496757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 16586723 - 16586811
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| |||||||||||| |  ||||||||||||    
T  16586723 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattgtacattaaatatata 16586811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 38047989 - 38048045
Alignment:
Q  175 tttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattg 231  Q
    ||||| ||| || ||||||||||| | ||||||||| | ||||||||||||||||||    
T  38047989 tttgtcttggaatttgtgtattttatcttaaatatacatttttttaataaataattg 38048045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 31039843 - 31039775
Alignment:
Q  162 ttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataatt 230  Q
    |||||||||||||||||||||| |||||||||||||||||||| | |||||| ||||||||||||||||    
T  31039843 ttaaagtagtatgtttgtattgtaacttgtgtattttctattataaatataactttttaataaataatt 31039775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 10887207 - 10887102
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||| | ||||| ||||||||||| |||  ||||  ||| |||||||||||||| |||||||||| ||  ||||||||    
T  10887207 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgatttggaacttgtgtattttatattaaatatgtagctttttaat 10887108  T
Q  223 aaataa 228  Q
    ||||||    
T  10887107 aaataa 10887102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 6017033 - 6016923
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| |||||||||||| | ||||| ||||||||||| |||  ||||  ||| |||||||| ||||  |||||||||||||| ||||||| |    
T  6017033 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatataactttttaaaa 6016934  T
Q  224 aataattgttg 234  Q
    ||||| |||||    
T  6016933 aataagtgttg 6016923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 124 - 224
Target Start/End: Complemental strand, 31503919 - 31503818
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataat-tttttaat 222  Q
    ||||||||  || |||||||||||| | ||||| || |||||||||||| |||| ||||| |||||||||||||| ||||||||||||| | ||||||||    
T  31503919 tttttctaatatgtgcaaatttgcacatgttaagaaatttaaagtagtaagtttatattggaacttgtgtattttatattaaatatatattctttttaat 31503820  T
Q  223 aa 224  Q
    ||    
T  31503819 aa 31503818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 14228125 - 14228237
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  |||| |||| ||||||   ||||| |||||||||||||| |||||      
T  14228125 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgt 14228224  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  14228225 taaataattgttg 14228237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 17552586 - 17552698
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  | || |||| ||||||   ||||| ||||||||||||||||||||      
T  17552586 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattatgcattggaacttgaacattttgtattaaatatataattttttgt 17552685  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  17552686 taaataattgttg 17552698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 28943768 - 28943880
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| || |||||| |||||  |||| |||| ||||||   ||||| |||||||||||||| |||||      
T  28943768 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgt 28943867  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  28943868 taaataattgttg 28943880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 31568288 - 31568177
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||||||||  ||||  ||||||||||||| |||| || ||||||| ||  |||| ||    
T  31568288 ggtttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttgatttgaaacttgtgttttttataataaatatgtagcttttgaa 31568189  T
Q  222 taaataattgttg 234  Q
    |||| ||||||||    
T  31568188 taaa-aattgttg 31568177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 34692533 - 34692425
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| ||| |  ||||||||| |||||||  ||||  ||||||||||| || |||| ||    
T  34692533 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttaaa 34692434  T
Q  222 taaataatt 230  Q
    |||||||||    
T  34692433 taaataatt 34692425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 1017807 - 1017889
Alignment:
Q  152 gttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    ||||| |||||||||||||||  ||||  |||||| ||||| ||||| |||||||||| ||| ||||||||||||||||||||    
T  1017807 gttaagaagtttaaagtagtaactttgacttgaaagttgtgcattttatattaaatatgtaaatttttaataaataattgttg 1017889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 8977467 - 8977577
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| || |||||||||   ||||| ||||| ||| |||||  ||||||||| |||||||| ||||| |||||||||| ||| |||| ||||    
T  8977467 tttttctatcatgtgtaaatttgcacttgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaata 8977566  T
Q  224 aataattgttg 234  Q
    ||| |||||||    
T  8977567 aatgattgttg 8977577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 232
Target Start/End: Original strand, 30591163 - 30591272
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| ||||||||| || | ||||| |||||| || | |||  |||| |||| ||||||| |||||| |||||||| ||||| ||||| ||    
T  30591163 gtttttctatcatgtgcaaatttacacatgttaagaagttttaaatggtaattttgcattgtaacttgtatattttgtattaaatgtataactttttgat 30591262  T
Q  223 aaataattgt 232  Q
    ||||||||||    
T  30591263 aaataattgt 30591272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 17596520 - 17596408
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||| | | | ||| |||||||||||||||  ||||  ||| |||||||| ||||| |||||| ||| ||  |||||||    
T  17596520 ggtttttctatcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgatttggaacttgtgcattttatattaactatgtagatttttaa 17596421  T
Q  222 taaataattgttg 234  Q
    ||| |||||||||    
T  17596420 taattaattgttg 17596408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 230
Target Start/End: Original strand, 29863301 - 29863409
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| |||||   |||| | | ||||| || ||||| |||||| |||| || |||||||    
T  29863301 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaaaattgtgtcggaacttttgcattttatattaactataaaactttttaa 29863400  T
Q  222 taaataatt 230  Q
    |||||||||    
T  29863401 taaataatt 29863409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 230
Target Start/End: Original strand, 31169762 - 31169870
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| || ||||||||| | ||||| || ||||||||||||  ||||  ||| |||||||| ||||| |||||||||| ||  |||||||    
T  31169762 ggtttttctatcatgtgtaaatttgcacatgttaacaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatatgtaggtttttaa 31169861  T
Q  222 taaataatt 230  Q
    ||| |||||    
T  31169862 taattaatt 31169870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 224
Target Start/End: Complemental strand, 17154793 - 17154700
Alignment:
Q  131 atcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataa 224  Q
    ||||| || |||||| || | ||||| || |||||| || || |||||| |||||||||||||||| | |||||||| ||||||||||||||||    
T  17154793 atcatttgtaaatttacacatgttaaaaaatttaaaataataggtttgttttgaaacttgtgtattctatattaaatgtataattttttaataa 17154700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 230
Target Start/End: Original strand, 23936378 - 23936483
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataa 224  Q
    |||| |||||| |||||||||||| | ||||| ||||||||  |||||  ||| | ||| |||||||  ||||| ||||||||| |||| ||||||||||    
T  23936378 ttttttatcatgtgcaaatttgcacatgttaacaagtttaacatagtaactttcttttggaacttgtacattttatattaaatacataactttttaataa 23936477  T
Q  225 ataatt 230  Q
    ||||||    
T  23936478 ataatt 23936483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 230
Target Start/End: Original strand, 29065424 - 29065531
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||| ||||| | ||||| ||||||||| |||||   |||||| | ||||  || ||||  |||||||||||||| |||||||    
T  29065424 ggtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaaatagtaatattgtatcggaactaatgcatttcatattaaatatataa-tttttaa 29065522  T
Q  222 taaataatt 230  Q
    |||||||||    
T  29065523 taaataatt 29065531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 230
Target Start/End: Original strand, 29120277 - 29120384
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||| ||||| | ||||| ||||||||| |||||   |||||| | ||||  || ||||  |||||||||||||| |||||||    
T  29120277 ggtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaaatagtaatattgtatcggaactaatgcatttcatattaaatatataa-tttttaa 29120375  T
Q  222 taaataatt 230  Q
    |||||||||    
T  29120376 taaataatt 29120384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 33017903 - 33017791
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||||||| || |||||||||||| | ||||| || |||||| |||||  |||| || | ||||||   ||||| |||||||||||||| |||||      
T  33017903 ggtttttctattatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatatataactttttgt 33017804  T
Q  222 taaataattgttg 234  Q
    |||||||||||||    
T  33017803 taaataattgttg 33017791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 27819627 - 27819730
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| | |||||||||| | ||||| ||||||||| | |||| ||||| || |||||| |  ||||| || ||||||| ||| ||||||||    
T  27819627 gtttttctatcatgtacaaatttgcacatgttaagaagtttaaaattgtatttttgtcttaaaacttattcattttatactaaatatgtaactttttaat 27819726  T
Q  223 aaat 226  Q
    ||||    
T  27819727 aaat 27819730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 30623480 - 30623393
Alignment:
Q  147 catacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    |||| ||||| ||||||||| ||| |  |||||||||||||||||  ||||  ||||||||||| || |||| |||||||||||||||    
T  30623480 catatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttgatattaaatataaaacttttgaataaataattgttg 30623393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 18332687 - 18332793
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| ||||||||| || | ||||| |||||||||||  ||  ||||  ||| ||||| || ||||  |||||||||||||  |||||||    
T  18332687 ggtttttctatcatgtgcaaattttcacatgttaagaagtttaaagtgataattttgacttggaacttatgcatttcatattaaatatatagctttttaa 18332786  T
Q  222 taaataa 228  Q
    |||||||    
T  18332787 taaataa 18332793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 31069583 - 31069692
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| ||||||||| || | ||||| ||||||||| |||||  ||||  ||| ||||||||| |||| |||||||||| |||   ||||||     
T  31069583 tttttctatcatgtgcaaatttacacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaa-catttaatc 31069681  T
Q  224 aataattgttg 234  Q
    |||||||||||    
T  31069682 aataattgttg 31069692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 16540747 - 16540671
Alignment:
Q  158 aagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataaataattgttg 234  Q
    ||||||||| | ||| |||| |||| ||| |||| |||||| ||||||||||||||| |||||| | ||||||||||    
T  16540747 aagtttaaaatcgtaagtttatattaaaatttgtatattttatattaaatatataatattttaagacataattgttg 16540671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 31790917 - 31791001
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaata 208  Q
    ||||||||||||||||||||||||| |  |||| || |||||| | | | |||||| ||||||||| |||||| | |||||||||    
T  31790917 tttttctatcatatgcaaatttgcacatattaagaaatttaaaatggcaagtttgtcttgaaacttatgtattctatattaaata 31791001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 34733702 - 34733790
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatata 212  Q
    |||||||| ||| |||||||||||| | |||||  |   |||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  34733702 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 34733790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 29074438 - 29074544
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||| ||||| | ||||| ||||||||| | |||   |||||| | ||||  || ||||  |||||||||||||| ||||||||    
T  29074438 gtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaaattgtaatattgtatcggaactaatgcatttcatattaaatatataa-tttttaat 29074536  T
Q  223 aaataatt 230  Q
    ||||||||    
T  29074537 aaataatt 29074544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 29079202 - 29079308
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||| ||||| | ||||| ||||||||| | |||   |||||| | ||||  || ||||  |||||||||||||| ||||||||    
T  29079202 gtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaaattgtaatattgtatcggaactaatgcatttcatattaaatatataa-tttttaat 29079300  T
Q  223 aaataatt 230  Q
    ||||||||    
T  29079301 aaataatt 29079308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 29107011 - 29107117
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||| ||||| | ||||| ||||||||| | |||   |||||| | ||||  || ||||  |||||||||||||| ||||||||    
T  29107011 gtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaaattgtaatattgtatcggaactaatgcatttcatattaaatatataa-tttttaat 29107109  T
Q  223 aaataatt 230  Q
    ||||||||    
T  29107110 aaataatt 29107117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 3853122 - 3853072
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagta 172  Q
    |||||||||||||| |||||||||||| | ||||| || ||||||||||||    
T  3853122 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagtagta 3853072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 17141451 - 17141342
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataa 224  Q
    |||| |||||| |||||||||||||| ||||| | ||||||  |||||  ||||| ||  ||||||   ||||| |||||||||| ||  ||||||||||    
T  17141451 ttttttatcatgtgcaaatttgcatatgttaagatgtttaagatagtaattttgtcttagaacttgctcattttatattaaatatgtagctttttaataa 17141352  T
Q  225 ataattgttg 234  Q
    || |||||||    
T  17141351 attattgttg 17141342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 31029462 - 31029523
Alignment:
Q  160 gtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    ||||||| |||||  ||||||||  |||| ||| ||||| ||||||||||||||||||||||    
T  31029462 gtttaaaatagtaactttgtattagaactagtgaattttatattaaatatataattttttaa 31029523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 2915630 - 2915693
Alignment:
Q  41 acctaacactctctttcatatagggtgaacttactaaaatgtcatttcaaatagggtgtataata 105  Q
    ||||||||||||||||||||| || | || |||||||||||| |||| | || ||||||||||||    
T  2915630 acctaacactctctttcatatcggatcaaattactaaaatgtaattttatat-gggtgtataata 2915693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 457
Target Start/End: Original strand, 10753901 - 10753949
Alignment:
Q  409 tttgtctcaaattataacccactttgaaaattttacacaaattaagaaa 457  Q
    |||| ||||||||| ||  |||||||||||||| |||||||||||||||    
T  10753901 tttgactcaaattacaagtcactttgaaaatttcacacaaattaagaaa 10753949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 18247774 - 18247814
Alignment:
Q  194 attttctattaaatatataattttttaataaataattgttg 234  Q
    ||||| ||||||||| |||||||| ||||||||||||||||    
T  18247774 attttatattaaatacataattttataataaataattgttg 18247814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 52778 - 52889
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||||||||  ||||  ||| ||||||||| |||| |||||||||| |||  ||||||    
T  52778 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaa-cttttaa 52876  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  52877 tcaataattgttg 52889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 145856 - 145745
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||||||||  ||||  ||| ||||||||| |||| |||||||||| |||  ||||||    
T  145856 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaa-cttttaa 145758  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  145757 tcaataattgttg 145745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 8416 - 8525
Alignment:
Q  125 ttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaataa 224  Q
    ||||||||||| || ||||||||||| ||||| || ||||||||||||  ||||  ||  |||||||| ||||| |||||||| | || |||||||||||    
T  8416 ttttctatcatgtgtaaatttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaatttgtagttttttaataa 8515  T
Q  225 ataattgttg 234  Q
    ||||||||||    
T  8516 ataattgttg 8525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 94018 - 94125
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaat 222  Q
    ||||||||||||| |||||||||||||| ||||| |||||| || || ||  |||  |||| ||||| |  ||||| ||||||||||||| |||||||||    
T  94018 gtttttctatcatgtgcaaatttgcatatgttaagaagttttaaatactaactttacattggaacttatacattttgtattaaatatatagttttttaat 94117  T
Q  223 aaataatt 230  Q
    ||||||||    
T  94118 aaataatt 94125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 182221 - 182112
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| || ||||||| | | ||||| ||||||||||||||| | |||  ||||||||||||| |||| |||||||||| |||  ||||||    
T  182221 ggtttttctatcatgtgtaaatttgtacatgttaagaagtttaaagtagtacg-ttgatttgaaacttgtgttttttatattaaatatgtaa-cttttaa 182124  T
Q  222 taaataattgtt 233  Q
    ||||||||||||    
T  182123 taaataattgtt 182112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 37113 - 37219
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||||  ||  ||||  ||| |||||||| ||||  |||||||||| ||  |||||||    
T  37113 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtgataactttgacttggaacttgtgcatttcatattaaatatgtagctttttaa 37212  T
Q  222 taaataa 228  Q
    |||||||    
T  37213 taaataa 37219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 41160 - 41085
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtatttt 198  Q
    ||||||||||||| || ||||||| ||| ||||| ||||||||| || ||  ||||||||||||||| || |||||    
T  41160 gtttttctatcatgtgtaaatttgtatatgttaagaagtttaaaataataattttgtattgaaacttatgcatttt 41085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 13564 - 13636
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtatt 196  Q
    ||||||||  || |||||||||||| | ||||| ||||||||| ||||| ||||| |||||||||||||||||    
T  13564 tttttctaatatgtgcaaatttgcacatgttaagaagtttaaattagtaagtttgcattgaaacttgtgtatt 13636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 5868 - 5759
Alignment:
Q  124 tttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaata 223  Q
    |||||||||||| |||||||||||| | ||||| |||||||||||||||  |||   || ||| |||| | |||| |||||||||| | | ||||||||     
T  5868 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaacttaaaatttgtattttttatattaaatatgt-agtttttaatc 5770  T
Q  224 aataattgttg 234  Q
    |||||||||||    
T  5769 aataattgttg 5759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 44293 - 44386
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataatt 215  Q
    |||||||||||||| |||||||||||| |  |||| ||||||||| ||  |  |||| |||||||||||| |||||| |||| |||| ||||||    
T  44293 ggtttttctatcatgtgcaaatttgcacatattaaaaagtttaaaataacaactttgcattgaaacttgtatattttttatttaataaataatt 44386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 3412 - 3523
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatatataattttttaa 221  Q
    |||||||||||||| || ||||||||| |  |||| ||||||||||||||   |||  |||| ||||| ||| |||| |||||||||| |||  ||||||    
T  3412 ggtttttctatcatgtgtaaatttgcacatattaagaagtttaaagtagttactttaaattggaacttatgttttttatattaaatatgtaa-cttttaa 3510  T
Q  222 taaataattgttg 234  Q
    | |||||||||||    
T  3511 tcaataattgttg 3523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 13264 - 13177
Alignment:
Q  122 ggtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaatat 209  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||| |||||  |||   ||| || |||||| |||| ||||||||||    
T  13264 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaatttggaatttgtgttttttatattaaatat 13177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 46839 - 46892
Alignment:
Q  43 ctaacactctctttcatatagggtgaacttactaaaatgtcatttcaaatagggt 97  Q
    |||||||||||||||| || |||||||  |||||||||||||||||| |||||||    
T  46839 ctaacactctctttcacat-gggtgaaaatactaaaatgtcatttcacatagggt 46892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 45497 - 45582
Alignment:
Q  123 gtttttctatcatatgcaaatttgcatacgttaataagtttaaagtagtatgtttgtattgaaacttgtgtattttctattaaata 208  Q
    ||||||||||||| ||||||||| |||| || || ||||||||| |||||   |||||| | |||||||| ||||  |||||||||    
T  45497 gtttttctatcatgtgcaaatttacatatgtaaagaagtttaaaatagtaatattgtatcggaacttgtgcatttcatattaaata 45582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 191379 - 191419
Alignment:
Q  188 ttgtgtattttctattaaatatataattttttaataaataat 229  Q
    ||||||||||| |||||||||||||| |||||||||||||||    
T  191379 ttgtgtattttatattaaatatataa-tttttaataaataat 191419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University