View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20618_high_77 (Length: 274)
Name: NF20618_high_77
Description: NF20618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20618_high_77 |
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Alignment Details
Target: chr8 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 31923792 - 31924049
Alignment:
| Q |
1 |
tgctgatagacagattgttttgtccgagtctaaccttgactgtccatatataattgtataattaggattatgtcgtccctatataatatgatttttaaaa |
100 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31923792 |
tgctgatagacagattgttttgtccaagtctaaccttgactgtccatatataattgtataattaggattatgtcgtccctatataatatgatttttaaaa |
31923891 |
T |
|
| Q |
101 |
acatacatggttggaagtagtgagatctttaagcaaaagtatcagcacctatatttatattaaaaacaaatgtactctactgctggtattagtgcttctg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31923892 |
acatacatggttggaagtagtgagatctttaagcaaaagtatcagcacctatatttatattaaaaacaaatgtactctactgctggtattagtgcttctg |
31923991 |
T |
|
| Q |
201 |
cgttgccgttgaaatacttcgcccatgtttgacatttctccctttgtaggggtatttt |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31923992 |
cgttgccgttgaaatacttcgcccatgtttgacatttctccctttgtaggggtatttt |
31924049 |
T |
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