View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20618_low_106 (Length: 206)
Name: NF20618_low_106
Description: NF20618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20618_low_106 |
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Alignment Details
Target: chr6 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 35095547 - 35095374
Alignment:
| Q |
18 |
ataccacatggccaggcctaaacaaactcaccggtcttaagaacatttacctttctaataataaattctctggcgagattccagcagaggcgtttcaagc |
117 |
Q |
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| T |
35095547 |
ataccacatggccaggcctaaacaaactcaccggtcttaagaacatttacctttctaataataaattctctggcgagattccagcagaggcgtttcaagc |
35095448 |
T |
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| Q |
118 |
gatgcagtggctgaagaaaatttatctcgacaataatcagttcactggtcctattccaacttcccttgcttcat |
191 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35095447 |
gatgcagtggctgaagaaaatttatctcgacaataatcagttcactggtcctattccaacttcccttgcttcat |
35095374 |
T |
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