View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20618_low_65 (Length: 318)

Name: NF20618_low_65
Description: NF20618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20618_low_65
NF20618_low_65
[»] chr5 (49 HSPs)
chr5 (132-216)||(12425547-12425631)
chr5 (122-195)||(33533539-33533612)
chr5 (127-216)||(39105440-39105529)
chr5 (133-217)||(10272442-10272526)
chr5 (122-174)||(11707073-11707125)
chr5 (122-174)||(37611215-37611267)
chr5 (122-174)||(37787945-37787997)
chr5 (122-216)||(2568633-2568728)
chr5 (127-174)||(4014429-4014476)
chr5 (122-173)||(17258883-17258934)
chr5 (120-170)||(7907903-7907953)
chr5 (126-176)||(8177536-8177586)
chr5 (122-167)||(10125718-10125763)
chr5 (129-214)||(16937890-16937975)
chr5 (122-199)||(32194079-32194156)
chr5 (132-216)||(7319382-7319466)
chr5 (122-174)||(12460001-12460053)
chr5 (131-174)||(7319017-7319060)
chr5 (127-174)||(7984987-7985034)
chr5 (122-153)||(16457613-16457644)
chr5 (131-174)||(18906360-18906403)
chr5 (122-168)||(10303820-10303866)
chr5 (124-174)||(12334352-12334402)
chr5 (126-172)||(28413288-28413334)
chr5 (132-174)||(38104867-38104909)
chr5 (122-216)||(41957451-41957545)
chr5 (127-216)||(9202753-9202842)
chr5 (129-178)||(13264112-13264160)
chr5 (122-167)||(14331392-14331437)
chr5 (140-216)||(14932266-14932342)
chr5 (122-167)||(19138717-19138762)
chr5 (125-174)||(32059362-32059411)
chr5 (127-172)||(34160751-34160796)
chr5 (122-167)||(37526199-37526244)
chr5 (122-167)||(37690636-37690681)
chr5 (130-174)||(1465028-1465072)
chr5 (140-216)||(6593276-6593351)
chr5 (122-174)||(7674666-7674718)
chr5 (122-174)||(12242710-12242762)
chr5 (122-162)||(12467163-12467203)
chr5 (126-174)||(12521546-12521594)
chr5 (122-174)||(17368694-17368746)
chr5 (122-174)||(18543197-18543248)
chr5 (126-174)||(19460585-19460633)
chr5 (122-162)||(35963271-35963311)
chr5 (122-174)||(36639540-36639592)
chr5 (132-164)||(39607514-39607546)
chr5 (124-172)||(39809934-39809982)
chr5 (124-216)||(42582888-42582980)
[»] chr4 (44 HSPs)
chr4 (122-216)||(28300299-28300393)
chr4 (122-216)||(7694010-7694104)
chr4 (126-216)||(17884044-17884134)
chr4 (130-176)||(25319893-25319939)
chr4 (126-216)||(30066770-30066860)
chr4 (123-216)||(52746841-52746934)
chr4 (129-216)||(25332750-25332838)
chr4 (126-174)||(53673662-53673710)
chr4 (124-174)||(55084483-55084533)
chr4 (121-174)||(4798565-4798618)
chr4 (122-171)||(46401286-46401334)
chr4 (132-173)||(53792590-53792631)
chr4 (126-174)||(5131254-5131302)
chr4 (129-217)||(17822872-17822960)
chr4 (122-174)||(23819107-23819159)
chr4 (122-154)||(24747357-24747389)
chr4 (126-170)||(47145984-47146028)
chr4 (122-165)||(1137739-1137782)
chr4 (122-153)||(8469377-8469408)
chr4 (122-165)||(33534169-33534212)
chr4 (125-172)||(43824303-43824350)
chr4 (122-173)||(44249304-44249355)
chr4 (122-172)||(3646679-3646729)
chr4 (134-172)||(18628555-18628593)
chr4 (126-216)||(20936233-20936323)
chr4 (140-174)||(30377433-30377467)
chr4 (122-168)||(42461275-42461321)
chr4 (133-174)||(2592320-2592361)
chr4 (122-211)||(2996554-2996643)
chr4 (133-174)||(14011252-14011293)
chr4 (122-167)||(22236105-22236150)
chr4 (129-174)||(24169281-24169326)
chr4 (131-216)||(27043839-27043924)
chr4 (125-165)||(8468975-8469015)
chr4 (125-165)||(24929520-24929560)
chr4 (126-158)||(25571294-25571326)
chr4 (126-174)||(29263388-29263436)
chr4 (124-212)||(35064835-35064923)
chr4 (126-170)||(40532598-40532642)
chr4 (122-174)||(46415792-46415844)
chr4 (136-216)||(47118979-47119059)
chr4 (126-174)||(47800641-47800689)
chr4 (128-216)||(51630087-51630175)
chr4 (148-216)||(56480324-56480392)
[»] chr1 (60 HSPs)
chr1 (122-218)||(7472285-7472382)
chr1 (122-202)||(34290226-34290306)
chr1 (122-174)||(46252682-46252734)
chr1 (127-212)||(27820342-27820427)
chr1 (122-202)||(7136998-7137078)
chr1 (122-174)||(10199408-10199460)
chr1 (126-174)||(15361058-15361106)
chr1 (122-174)||(28689452-28689504)
chr1 (122-170)||(31517740-31517788)
chr1 (122-173)||(6292512-6292563)
chr1 (122-173)||(8016276-8016327)
chr1 (127-174)||(38503470-38503517)
chr1 (122-192)||(27140478-27140548)
chr1 (122-199)||(4622086-4622163)
chr1 (122-171)||(5886994-5887043)
chr1 (122-174)||(25479599-25479651)
chr1 (122-174)||(37593684-37593736)
chr1 (122-200)||(4700066-4700144)
chr1 (141-211)||(39596578-39596648)
chr1 (122-199)||(3224416-3224493)
chr1 (129-214)||(3234022-3234107)
chr1 (126-199)||(14629970-14630043)
chr1 (138-219)||(43332457-43332538)
chr1 (129-202)||(45975680-45975753)
chr1 (122-167)||(47877134-47877179)
chr1 (122-162)||(7761611-7761651)
chr1 (122-174)||(16981936-16981988)
chr1 (126-174)||(28077073-28077121)
chr1 (126-162)||(29007720-29007756)
chr1 (122-174)||(35080069-35080121)
chr1 (122-174)||(37842355-37842407)
chr1 (122-174)||(43722328-43722380)
chr1 (122-173)||(1565535-1565586)
chr1 (126-165)||(6659541-6659580)
chr1 (129-216)||(24915058-24915145)
chr1 (122-173)||(30257702-30257753)
chr1 (122-152)||(4549888-4549918)
chr1 (122-168)||(5276317-5276363)
chr1 (122-216)||(10809321-10809415)
chr1 (132-174)||(12564509-12564551)
chr1 (125-199)||(23902070-23902144)
chr1 (122-168)||(30371172-30371218)
chr1 (128-174)||(35590898-35590944)
chr1 (122-164)||(38170690-38170732)
chr1 (131-216)||(2294887-2294972)
chr1 (129-202)||(2777882-2777955)
chr1 (126-174)||(19389919-19389968)
chr1 (122-167)||(27963370-27963415)
chr1 (128-173)||(38247059-38247104)
chr1 (122-199)||(44422692-44422769)
chr1 (127-187)||(489065-489125)
chr1 (122-166)||(4699615-4699659)
chr1 (122-174)||(12477287-12477339)
chr1 (141-173)||(13363443-13363475)
chr1 (122-214)||(23445312-23445404)
chr1 (122-174)||(24460407-24460459)
chr1 (122-154)||(29635385-29635417)
chr1 (122-174)||(35925708-35925760)
chr1 (128-164)||(48748321-48748357)
chr1 (122-162)||(49517091-49517131)
[»] chr2 (44 HSPs)
chr2 (122-174)||(35379016-35379068)
chr2 (127-180)||(7928304-7928357)
chr2 (122-216)||(43910999-43911093)
chr2 (125-174)||(12313176-12313225)
chr2 (122-195)||(16867736-16867809)
chr2 (120-173)||(19333323-19333376)
chr2 (122-174)||(15120201-15120253)
chr2 (122-174)||(29316775-29316827)
chr2 (122-174)||(43199784-43199836)
chr2 (126-174)||(44443339-44443387)
chr2 (129-216)||(3611202-3611289)
chr2 (124-216)||(42907335-42907429)
chr2 (126-216)||(1625876-1625966)
chr2 (127-209)||(29628748-29628830)
chr2 (122-180)||(41809245-41809303)
chr2 (127-216)||(26626849-26626938)
chr2 (122-171)||(35378532-35378581)
chr2 (125-174)||(38078413-38078462)
chr2 (122-174)||(1893281-1893333)
chr2 (140-216)||(12464491-12464567)
chr2 (122-174)||(34652036-34652088)
chr2 (128-167)||(41407629-41407668)
chr2 (122-173)||(41817187-41817238)
chr2 (122-212)||(680483-680573)
chr2 (122-164)||(1056129-1056171)
chr2 (130-216)||(18066104-18066190)
chr2 (122-168)||(28677659-28677705)
chr2 (122-172)||(43065450-43065500)
chr2 (140-213)||(1810644-1810716)
chr2 (122-199)||(10198480-10198557)
chr2 (122-167)||(10567082-10567127)
chr2 (122-167)||(12147482-12147527)
chr2 (122-199)||(14666541-14666618)
chr2 (133-174)||(35329829-35329870)
chr2 (122-167)||(40158743-40158788)
chr2 (126-174)||(8017452-8017500)
chr2 (122-174)||(9530728-9530780)
chr2 (122-174)||(9875465-9875517)
chr2 (122-162)||(11063518-11063558)
chr2 (130-174)||(11488295-11488339)
chr2 (130-174)||(15978003-15978047)
chr2 (122-174)||(33192220-33192272)
chr2 (132-216)||(42457924-42458008)
chr2 (123-163)||(43717137-43717177)
[»] chr8 (36 HSPs)
chr8 (129-216)||(27028807-27028894)
chr8 (124-174)||(42215084-42215134)
chr8 (122-174)||(20672768-20672820)
chr8 (128-216)||(2482841-2482927)
chr8 (122-199)||(30389092-30389169)
chr8 (122-174)||(21653099-21653151)
chr8 (122-174)||(33714236-33714288)
chr8 (122-173)||(779061-779112)
chr8 (127-173)||(9956819-9956865)
chr8 (122-216)||(37353249-37353343)
chr8 (122-176)||(42215306-42215360)
chr8 (126-199)||(28769343-28769416)
chr8 (129-170)||(30918135-30918176)
chr8 (122-174)||(11569457-11569509)
chr8 (122-174)||(25869266-25869318)
chr8 (123-174)||(7918447-7918498)
chr8 (131-202)||(8062319-8062390)
chr8 (131-174)||(8066849-8066892)
chr8 (122-165)||(41606903-41606946)
chr8 (127-210)||(43504733-43504816)
chr8 (123-174)||(44236824-44236875)
chr8 (122-152)||(2594997-2595027)
chr8 (122-168)||(4281570-4281616)
chr8 (122-200)||(10358570-10358648)
chr8 (124-174)||(11185239-11185289)
chr8 (124-174)||(11493983-11494033)
chr8 (127-172)||(3536950-3536995)
chr8 (124-165)||(12851203-12851244)
chr8 (138-211)||(38036128-38036201)
chr8 (122-187)||(41620291-41620356)
chr8 (124-172)||(5069717-5069765)
chr8 (138-218)||(10114463-10114543)
chr8 (130-174)||(11494164-11494208)
chr8 (128-172)||(12558996-12559040)
chr8 (122-174)||(27754422-27754474)
chr8 (122-174)||(28784796-28784847)
[»] chr3 (47 HSPs)
chr3 (122-172)||(40665449-40665499)
chr3 (122-174)||(33883750-33883802)
chr3 (122-216)||(52618979-52619073)
chr3 (122-174)||(20669190-20669242)
chr3 (122-174)||(47513671-47513723)
chr3 (122-174)||(54837034-54837086)
chr3 (129-216)||(20880452-20880539)
chr3 (122-173)||(36139897-36139948)
chr3 (122-216)||(1816559-1816653)
chr3 (122-176)||(3044259-3044313)
chr3 (124-174)||(21862177-21862227)
chr3 (122-200)||(39602210-39602288)
chr3 (122-164)||(45432939-45432981)
chr3 (131-216)||(2719445-2719529)
chr3 (127-216)||(21367643-21367732)
chr3 (122-167)||(25925767-25925812)
chr3 (125-174)||(30573917-30573966)
chr3 (122-171)||(36887525-36887574)
chr3 (122-174)||(23808064-23808116)
chr3 (122-174)||(24785223-24785275)
chr3 (140-216)||(30443869-30443945)
chr3 (122-174)||(34924538-34924590)
chr3 (122-174)||(37273152-37273204)
chr3 (122-174)||(41633378-41633430)
chr3 (129-173)||(46031009-46031053)
chr3 (122-174)||(47249486-47249538)
chr3 (122-173)||(34954101-34954152)
chr3 (122-173)||(36101587-36101638)
chr3 (122-173)||(50952352-50952403)
chr3 (127-213)||(402547-402633)
chr3 (124-170)||(2318667-2318713)
chr3 (132-174)||(23793602-23793644)
chr3 (131-173)||(34414793-34414835)
chr3 (131-173)||(48991870-48991912)
chr3 (122-172)||(52440662-52440712)
chr3 (122-183)||(36200105-36200166)
chr3 (122-167)||(37825147-37825192)
chr3 (122-174)||(41724229-41724282)
chr3 (122-167)||(54180780-54180825)
chr3 (131-199)||(23785248-23785316)
chr3 (124-176)||(27787027-27787079)
chr3 (122-174)||(41057172-41057224)
chr3 (122-162)||(42745068-42745108)
chr3 (122-174)||(45541589-45541641)
chr3 (127-215)||(46886697-46886785)
chr3 (122-174)||(48048982-48049034)
chr3 (122-174)||(51130768-51130820)
[»] chr7 (33 HSPs)
chr7 (122-174)||(7244698-7244750)
chr7 (122-172)||(35267382-35267432)
chr7 (122-174)||(9423594-9423646)
chr7 (122-173)||(21247944-21247996)
chr7 (124-172)||(39566209-39566257)
chr7 (122-172)||(25670586-25670636)
chr7 (122-216)||(31771703-31771797)
chr7 (122-171)||(22551405-22551454)
chr7 (133-174)||(25596051-25596092)
chr7 (122-174)||(33871269-33871319)
chr7 (124-173)||(35007617-35007665)
chr7 (125-214)||(39907781-39907870)
chr7 (122-167)||(46082061-46082106)
chr7 (122-174)||(529393-529445)
chr7 (122-174)||(24363601-24363653)
chr7 (122-174)||(43250699-43250751)
chr7 (132-216)||(44821935-44822019)
chr7 (130-173)||(27378836-27378879)
chr7 (122-174)||(48917344-48917398)
chr7 (122-216)||(12110336-12110430)
chr7 (124-174)||(42656513-42656563)
chr7 (122-168)||(47559601-47559647)
chr7 (127-216)||(28165067-28165156)
chr7 (127-216)||(33678756-33678845)
chr7 (122-163)||(39539781-39539822)
chr7 (134-174)||(514785-514825)
chr7 (138-174)||(12792579-12792615)
chr7 (123-163)||(20553132-20553172)
chr7 (125-153)||(20888397-20888425)
chr7 (122-162)||(29286821-29286861)
chr7 (122-174)||(33894645-33894697)
chr7 (126-174)||(39280987-39281035)
chr7 (122-162)||(47134757-47134797)
[»] chr6 (25 HSPs)
chr6 (122-174)||(4420661-4420713)
chr6 (122-174)||(6647405-6647457)
chr6 (122-173)||(3528822-3528873)
chr6 (122-177)||(7785744-7785799)
chr6 (122-197)||(31624085-31624160)
chr6 (122-164)||(6536975-6537017)
chr6 (122-164)||(9027606-9027648)
chr6 (124-174)||(17241254-17241304)
chr6 (122-167)||(27909638-27909683)
chr6 (122-174)||(10616541-10616593)
chr6 (122-174)||(13908481-13908533)
chr6 (122-216)||(415280-415374)
chr6 (138-216)||(9093572-9093650)
chr6 (129-162)||(31420975-31421008)
chr6 (122-154)||(821837-821869)
chr6 (138-174)||(835265-835301)
chr6 (141-217)||(6654590-6654666)
chr6 (69-121)||(8010457-8010509)
chr6 (140-200)||(12230353-12230413)
chr6 (124-164)||(28641751-28641791)
chr6 (122-162)||(29296295-29296335)
chr6 (122-174)||(30863264-30863316)
chr6 (124-172)||(32386108-32386156)
chr6 (124-172)||(32386565-32386613)
chr6 (122-174)||(34939762-34939814)
[»] scaffold0147 (2 HSPs)
scaffold0147 (124-174)||(4937-4987)
scaffold0147 (122-174)||(12704-12756)
[»] scaffold0018 (1 HSPs)
scaffold0018 (139-216)||(178342-178419)


Alignment Details
Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 12425631 - 12425547
Alignment:
Q  132 ataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||||||||| |||||||| ||||| ||||||||||||| ||| | |||||| |||||||||||| | |||||||||||||    
T  12425631 ataagttgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactt 12425547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 33533539 - 33533612
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagct 195  Q
    |||||| ||||||||||||||||| |||||||  ||||||||||||||||||| ||| | |||| | |||||||    
T  33533539 tgacatattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaacaccttatagct 33533612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 39105529 - 39105440
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||||| | |||| |||||||||| ||||| ||||||||||||| | | | |||||  |||||||||||| | |||||||||||||    
T  39105529 tgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaatttaactt 39105440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 10272442 - 10272526
Alignment:
Q  133 taagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactta 217  Q
    |||||||||||||||||||||| |||| ||||||||||| || | | | |||| | |||||||||||| | |||||||| |||||    
T  10272442 taagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaacaatttgactta 10272526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 11707125 - 11707073
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||| ||||||||||||||||||||||| | ||||||| |||||||||    
T  11707125 tgacatgtttataagttgttttcagcttattttcaaaagctctacaagatagc 11707073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 37611215 - 37611267
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||| ||||||||| ||||||  |||||||||||||||||||    
T  37611215 tgacatgttcataagctgttttcaggttatttccataagctctccaagatagc 37611267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 37787945 - 37787997
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||| ||||||||| ||||||  |||||||||||||||||||    
T  37787945 tgacatgttcataagctgttttcaggttatttccataagctctccaagatagc 37787997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 2568728 - 2568633
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatac-aagaacaatttaactt 216  Q
    |||||| |||||||||| |||| |||||||||| || ||||||||| |||||| | | | |||| | |||||||||||| || |||||||||||||    
T  2568728 tgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaacttatagcttatacgaaaaacaatttaactt 2568633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 4014429 - 4014476
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||    
T  4014429 tgttcataagctgttttcagcttattttcataagttctccaagatagc 4014476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 17258883 - 17258934
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| || |||||    
T  17258883 tgacatgttcataagctgttttcagcttattttcataagctcttcaggatag 17258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 7907953 - 7907903
Alignment:
Q  120 actgacatgttcataagttgttttcagcttattttgataagctctccaaga 170  Q
    ||||| || |||||||||||||||||||||| ||| |||||||||||||||    
T  7907953 actgaaatattcataagttgttttcagcttaatttcataagctctccaaga 7907903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 8177536 - 8177586
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagcat 176  Q
    |||| |||||||||||||||| ||||||| |||||||||||| ||||||||    
T  8177536 atgtccataagttgttttcaggttattttcataagctctccaggatagcat 8177586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 10125718 - 10125763
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcca 167  Q
    ||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  10125718 tgacatgttgataaggtgttttcagcttattttcataagctctcca 10125763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 16937890 - 16937975
Alignment:
Q  129 ttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaac 214  Q
    |||||||| | |||||||||||||||  |||| ||||||| ||||| | ||| |||| | |||||| ||||||| |||||||||||    
T  16937890 ttcataagcttttttcagcttattttcctaagttctccaatatagcgtataaaaacaacttatagcatatacaaaaacaatttaac 16937975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 32194079 - 32194156
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttata 199  Q
    |||||| | |||||||||||||||||||||||  |||||||||| |||||||| |  || |||| | |||||||||||    
T  32194079 tgacatttccataagttgttttcagcttatttatataagctctcaaagatagcttaaaaaaacatcttatagcttata 32194156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 7319466 - 7319382
Alignment:
Q  132 ataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||| |||||||||||||| ||||| ||||||||||||| |   | |||||  |||||||||||  | |||||||||||||    
T  7319466 ataagttgctttcagcttatttttataagttctccaagatagcttacgaaaacagtttatagcttatatgaaaacaatttaactt 7319382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 12460001 - 12460053
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||| ||||||||  ||||||||| ||||||||| |||||||||    
T  12460001 tgacatgttcatatgttgtttttggcttattttcataagctctgcaagatagc 12460053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 7319017 - 7319060
Alignment:
Q  131 cataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||    
T  7319017 cataagttgttctcagcttattttcataagttctccaagatagc 7319060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 7985034 - 7984987
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||| ||||||||||||||||| ||||  |||||||||||||    
T  7985034 tgttcataagctgttttcagcttattttcataaattctccaagatagc 7984987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 153
Target Start/End: Original strand, 16457613 - 16457644
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattt 153  Q
    ||||||||||||||||||||||||||||||||    
T  16457613 tgacatgttcataagttgttttcagcttattt 16457644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 18906403 - 18906360
Alignment:
Q  131 cataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||||||| |||||||| | |||||||||    
T  18906403 cataagttgttttcagcttatttcgataagcttttcaagatagc 18906360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 10303866 - 10303820
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaa 168  Q
    |||||||| ||||||||||| |||||||||||| ||||||| |||||    
T  10303866 tgacatgtccataagttgttgtcagcttattttcataagctttccaa 10303820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 12334352 - 12334402
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||| |||||||||||| ||||||||||  ||||||||||||| ||||    
T  12334352 acatgtttataagttgtttttagcttattttattaagctctccaaggtagc 12334402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 28413288 - 28413334
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagata 172  Q
    ||||||||||| ||||||||||||||||  |||| ||||||||||||    
T  28413288 atgttcataagctgttttcagcttatttccataaactctccaagata 28413334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 174
Target Start/End: Original strand, 38104867 - 38104909
Alignment:
Q  132 ataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||||||  |||||||||| ||||||||    
T  38104867 ataagttgttttcagcttatttccataagctctctaagatagc 38104909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 216
Target Start/End: Original strand, 41957451 - 41957545
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||| ||||||||||||||| |||||||| ||||| |||| | |||||| | | | |||||| |||| |||| |  | |||||||||||||    
T  41957451 tgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaatttaactt 41957545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 9202753 - 9202842
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||||| ||||| ||||||||||| ||||| ||| ||||||| | | | | |||||| ||| |||||||  | |||||||||||||    
T  9202753 tgttcataagctgtttccagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaactt 9202842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 13264112 - 13264160
Alignment:
Q  129 ttcataagttgttttcagcttattttgataagctctccaagatagcatgt 178  Q
    |||||||| ||||||||||||||||| ||||||||| || ||||||||||    
T  13264112 ttcataagctgttttcagcttatttt-ataagctcttcatgatagcatgt 13264160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 14331437 - 14331392
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcca 167  Q
    |||||||| |||||| || |||||||||||||| ||||||||||||    
T  14331437 tgacatgtccataagctgatttcagcttattttcataagctctcca 14331392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 14932342 - 14932266
Alignment:
Q  140 ttttcagcttattttga-taagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||||||| | |||||| |||| |||| | | ||| |||||| |||||||||||||| |||||||||||||    
T  14932342 ttttcagcttattttaaataagctttccatgataacttataacaacagcttatagcttatacaa-aacaatttaactt 14932266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 19138717 - 19138762
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcca 167  Q
    |||||||| ||||| |||||||||||||||||  ||||||||||||    
T  19138717 tgacatgtacataaattgttttcagcttatttccataagctctcca 19138762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 32059362 - 32059411
Alignment:
Q  125 catgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||| ||||||||||||||||||| |||||| |||| | ||||||    
T  32059362 catgttcatgagttgttttcagcttatttcgataagttctctaggatagc 32059411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 34160796 - 34160751
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagata 172  Q
    |||||||||  ||||||||||||||||| ||||| |||||||||||    
T  34160796 tgttcataaactgttttcagcttattttcataagttctccaagata 34160751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 37526199 - 37526244
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcca 167  Q
    ||||||||| ||||| ||||||||||||||||  ||||||||||||    
T  37526199 tgacatgttaataagctgttttcagcttatttccataagctctcca 37526244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 37690636 - 37690681
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcca 167  Q
    ||||||||| ||||| ||||||||||||||||  ||||||||||||    
T  37690636 tgacatgttaataagctgttttcagcttatttccataagctctcca 37690681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 1465028 - 1465072
Alignment:
Q  130 tcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||||||||| | |||  ||||||||||||    
T  1465028 tcataagttgttttcagcttattttcacaagtcctccaagatagc 1465072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 6593351 - 6593276
Alignment:
Q  140 ttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||||||| |||||||||| ||| |||| | | | |||||| |||||| ||||| |||| ||||||||||    
T  6593351 ttttcagcttattttcataagctctctaaggtagcttatcaaaacagcttatagcctatac-agaataatttaactt 6593276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 7674718 - 7674666
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||| ||||| ||||||||||||||||| | ||  |||||||||||||    
T  7674718 tgacatgtttataaggtgttttcagcttattttcacaaattctccaagatagc 7674666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 12242710 - 12242762
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||  ||| |||||||||||||||| ||  |||||||||||||||||||    
T  12242710 tgacatgaacattagttgttttcagcttacttccataagctctccaagatagc 12242762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 12467203 - 12467163
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagct 162  Q
    ||||||||| ||||| ||||||||||||||||| |||||||    
T  12467203 tgacatgtttataagctgttttcagcttattttcataagct 12467163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 12521594 - 12521546
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||| ||||||||||||||||  ||||||||| ||| |||||    
T  12521594 atgttcataagctgttttcagcttatttccataagctcttcaaaatagc 12521546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 17368746 - 17368694
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||| |  |||||||||||||||  |||| ||||||||||||||    
T  17368746 tgacatgttcatatgcagttttcagcttatttccataacctctccaagatagc 17368694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 18543197 - 18543248
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| ||| |||||||||||||||| ||| |||||||||||| ||||||    
T  18543197 tgacatgtccatgagttgttttcagctta-tttcataagctctccaggatagc 18543248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 19460633 - 19460585
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||| ||||||||||| ||||  |||||||||||| ||||||    
T  19460633 atgttcataagatgttttcagctcatttccataagctctccatgatagc 19460585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 35963311 - 35963271
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagct 162  Q
    |||||||| |||||||||||||||||||||||  |||||||    
T  35963311 tgacatgtccataagttgttttcagcttatttccataagct 35963271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 36639592 - 36639540
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||| ||| ||||||||||||||  |||||||| ||||||||| |||||||||    
T  36639592 tgacgtgtccataagttgttttcctcttattttcataagctcttcaagatagc 36639540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 39607546 - 39607514
Alignment:
Q  132 ataagttgttttcagcttattttgataagctct 164  Q
    |||||||||||||||||||||| ||||||||||    
T  39607546 ataagttgttttcagcttatttcgataagctct 39607514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 39809982 - 39809934
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagata 172  Q
    |||||||||||| | |||||||||||||||| |||||||| ||| ||||    
T  39809982 acatgttcataaatcgttttcagcttattttcataagctcgccatgata 39809934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 42582980 - 42582888
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||||  |||||| |||||||||| ||||| ||||||| ||||| |  || |||||| |||| |||| || |  ||||||||||||    
T  42582980 acatgttcataaactgttttgagcttattttcataagttctccaatatagcttacaaaaacagcttataccttaaacgaacacaatttaactt 42582888  T

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Target: chr4 (Bit Score: 47; Significance: 8e-18; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 122 - 216
Target Start/End: Original strand, 28300299 - 28300393
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||||| ||||||||||||| |||||||| ||||||||| ||||||||| | | | || ||  |||||||||||||| |||||||||||||    
T  28300299 tgacatgttcttaagttgttttcaacttattttcataagctcttcaagatagcctatgaaaatagtttatagcttatacaaaaacaatttaactt 28300393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 216
Target Start/End: Original strand, 7694010 - 7694104
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||| |||| | | | | |||||| |||||||||||||| |||| ||| ||||    
T  7694010 tgacatgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagcttatacaaaaacagtttgactt 7694104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 17884134 - 17884044
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| ||||| | | | |||| |  ||| ||||||||| |||||||||||||    
T  17884134 atgttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataacttatacaaaaacaatttaactt 17884044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 25319939 - 25319893
Alignment:
Q  130 tcataagttgttttcagcttattttgataagctctccaagatagcat 176  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||    
T  25319939 tcataagttgttttcagctaattttgataagttctccaagatagcat 25319893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 30066770 - 30066860
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||  |||||||||||| |||| ||||||||||||||||||| | | |||||||| || || |||||| | |||||| ||||||    
T  30066770 atgttcataatctgttttcagcttgtttttataagctctccaagatagcttatgagaacagcttacagtttatacgaaaacaatgtaactt 30066860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 52746841 - 52746934
Alignment:
Q  123 gacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||||||||| ||||||||||| ||||| ||||||  | ||||||||| | | | |||||| ||| ||||| |||| |||||||||||||    
T  52746841 gacatgttcataagctgttttcagctgattttcataagccttacaagatagcttatgaaaacagcttatggcttacacaaaaacaatttaactt 52746934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 25332838 - 25332750
Alignment:
Q  129 ttcataagttgttttcagcttattttgataagctct-ccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||||||||||||||||||||| ||||| |||   |||||||| | ||| || ||| || ||||||||||| |||||||||||||    
T  25332838 ttcataagttgttttcagcttattttcataagttctgataagatagcttataaaaatagcttagagcttatacaaaaacaatttaactt 25332750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 53673662 - 53673710
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||    
T  53673662 atgtccataagttgttttcagcttatttacataagctctccaagatagc 53673710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 55084483 - 55084533
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||| || |||||||||||||| |||||||||| ||||||||    
T  55084483 acatgttcataagctggtttcagcttattttcataagctctctaagatagc 55084533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 4798565 - 4798618
Alignment:
Q  121 ctgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||| |||||| |||||| |||||||||  |||||||||||||||||||    
T  4798565 ctgacatgtacataagctgttttgagcttatttgcataagctctccaagatagc 4798618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 46401334 - 46401286
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagat 171  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  46401334 tgacatgttcataagttgtattcagctta-tttaataagctctccaagat 46401286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 53792631 - 53792590
Alignment:
Q  132 ataagttgttttcagcttattttgataagctctccaagatag 173  Q
    ||||||||||||||||||||||| |||| |||||||||||||    
T  53792631 ataagttgttttcagcttattttcataaactctccaagatag 53792590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 5131254 - 5131302
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||| |||||||||||||||||||||||  |||||||||||| ||||||    
T  5131254 atgtccataagttgttttcagcttatttccataagctctccaggatagc 5131302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 17822872 - 17822960
Alignment:
Q  129 ttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactta 217  Q
    |||||||| | |||| |||||||||| ||||| ||||||||||||| | | | |||| | |||||| |||| || ||||||||||||||    
T  17822872 ttcataagctttttttagcttattttcataagttctccaagatagcttatgaaaacaacttatagcatataaaataacaatttaactta 17822960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 23819159 - 23819107
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| ||||||||||||||| |||||||  ||||||||| |||||||||    
T  23819159 tgacatgtccataagttgttttcatcttatttctataagctcttcaagatagc 23819107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 24747389 - 24747357
Alignment:
Q  122 tgacatgttcataagttgttttcagcttatttt 154  Q
    |||||||||||||||||||||||||||||||||    
T  24747389 tgacatgttcataagttgttttcagcttatttt 24747357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 47146028 - 47145984
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaaga 170  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||    
T  47146028 atgttcataagttgttttcaccttattttcataagctcttcaaga 47145984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 1137782 - 1137739
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctc 165  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||    
T  1137782 tgacatgttcataagttgttttcagtttatttccataagctctc 1137739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 153
Target Start/End: Original strand, 8469377 - 8469408
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattt 153  Q
    ||||||||||||||||||||||||||||||||    
T  8469377 tgacatgttcataagttgttttcagcttattt 8469408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 33534169 - 33534212
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctc 165  Q
    |||||| | |||||||||||||||||||||||| ||||||||||    
T  33534169 tgacatatccataagttgttttcagcttattttcataagctctc 33534212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 43824350 - 43824303
Alignment:
Q  125 catgttcataagttgttttcagcttattttgataagctctccaagata 172  Q
    |||||||||||||||||||||||||||||  ||||||| |||| ||||    
T  43824350 catgttcataagttgttttcagcttatttccataagctttccaggata 43824303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 44249355 - 44249304
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    ||||||||| ||||||| | ||||||||||||| |||| |||||||||||||    
T  44249355 tgacatgttgataagttttcttcagcttattttcataaactctccaagatag 44249304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 3646679 - 3646729
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagata 172  Q
    |||||||| |||||| || ||||||||| | ||||||||||||||||||||    
T  3646679 tgacatgtccataagctgctttcagcttctattgataagctctccaagata 3646729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 18628555 - 18628593
Alignment:
Q  134 aagttgttttcagcttattttgataagctctccaagata 172  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  18628555 aagttgttttcagcttatttccataagctctccaagata 18628593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 20936233 - 20936323
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||| |||||||| |||||||  |||| ||||||| ||||| || | | |||| ||||||| ||||| || |||||||| ||||    
T  20936233 atgttcataagctgttttcaccttatttccataatctctccaggatagaatatgaaaacaacctatagattatataaaaacaatttgactt 20936323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 174
Target Start/End: Original strand, 30377433 - 30377467
Alignment:
Q  140 ttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||| |||||||||||||||||||    
T  30377433 ttttcagcttattttcataagctctccaagatagc 30377467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 42461321 - 42461275
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaa 168  Q
    |||| ||||||||||||| |||||||||||||| ||||||| |||||    
T  42461321 tgacgtgttcataagttgatttcagcttattttcataagctgtccaa 42461275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 2592320 - 2592361
Alignment:
Q  133 taagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||||||||||||||  ||||||||||||| |||||    
T  2592320 taagttgttttcagcttatttccataagctctccaaaatagc 2592361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 2996643 - 2996554
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaattt 211  Q
    |||||||| |||||| | |||||| |||||||| ||| ||||||||||||||| | | | |||| | |||| |||||| || ||||||||    
T  2996643 tgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttataacttatataaaaacaattt 2996554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 14011293 - 14011252
Alignment:
Q  133 taagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||| ||||||||||||||||  |||||||||||||||||||    
T  14011293 taagctgttttcagcttatttccataagctctccaagatagc 14011252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 22236105 - 22236150
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcca 167  Q
    |||||||||||| || ||||||| ||||||||| ||||||||||||    
T  22236105 tgacatgttcatgagctgttttctgcttattttcataagctctcca 22236150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 24169326 - 24169281
Alignment:
Q  129 ttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| | |||||| |||||||| |||||||||||||||||||    
T  24169326 ttcataagattttttcaacttattttcataagctctccaagatagc 24169281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 27043839 - 27043924
Alignment:
Q  131 cataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||| ||||||| ||||||| || ||| | ||||||||||||  | ||| |||| | |||||||||||| | |||||||||||||    
T  27043839 cataaattgtttttagcttatattcatacgttctccaagatagtttataaaaacatcttatagcttatacgaaaacaatttaactt 27043924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 8469015 - 8468975
Alignment:
Q  125 catgttcataagttgttttcagcttattttgataagctctc 165  Q
    ||||| |||||||||||||||| ||||||| ||||||||||    
T  8469015 catgtccataagttgttttcagattattttcataagctctc 8468975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 24929560 - 24929520
Alignment:
Q  125 catgttcataagttgttttcagcttattttgataagctctc 165  Q
    ||||||||||| |||||||||||||||||  ||||||||||    
T  24929560 catgttcataaattgttttcagcttatttccataagctctc 24929520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 25571326 - 25571294
Alignment:
Q  126 atgttcataagttgttttcagcttattttgata 158  Q
    ||||||||||| |||||||||||||||||||||    
T  25571326 atgttcataagctgttttcagcttattttgata 25571294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 29263436 - 29263388
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||||||||||||  | ||||||| || ||||||    
T  29263436 atgttcataagttgttttcagcttatttccacaagctctgcaggatagc 29263388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 35064923 - 35064835
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaattta 212  Q
    ||||||| |||| |||||||||||||||||  |||| ||||||| |||| | | | | |||||| |||||| ||||||| |||| ||||    
T  35064923 acatgtttataaattgttttcagcttatttccataaactctccatgatatcttatgaaaacagcatatagcctatacaaaaacagttta 35064835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 40532598 - 40532642
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaaga 170  Q
    |||||||||||||||||||| ||||||||  || |||||||||||    
T  40532598 atgttcataagttgttttcatcttattttcgtaggctctccaaga 40532642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 46415792 - 46415844
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| |||||||||||||||||| |||||  ||||||||| | ||||||    
T  46415792 tgacatgtccataagttgttttcagctaattttactaagctctcgaggatagc 46415844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 47118979 - 47119059
Alignment:
Q  136 gttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||||||||||| || ||||| ||| ||||||||||| | |  ||| | |||||||||||  | |||||||||||||    
T  47118979 gttgttttcagcttatcttcataagttcttcaagatagcatatgaatacaacttatagcttatatgaaaacaatttaactt 47119059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 47800689 - 47800641
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||| |||||  |||||||||||||||| ||||||||| |||||||||    
T  47800689 atgtttataagcggttttcagcttattttcataagctcttcaagatagc 47800641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 51630175 - 51630087
Alignment:
Q  128 gttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||| |||| ||||||||||||||||| ||||  ||| ||||||||| | | | || ||| |||||||||||  | |||||||||||||    
T  51630175 gttcgtaagatgttttcagcttattttcataaattcttcaagatagcttatgaaaatagcttatagcttatatcaaaacaatttaactt 51630087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 56480392 - 56480324
Alignment:
Q  148 ttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||| ||||||||||||||||||  | | | |||||| |||| ||||||||  |||||||||||||    
T  56480392 ttattttcataagctctccaagatagtttatgaaaacagcttataacttatacataaacaatttaactt 56480324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 218
Target Start/End: Complemental strand, 7472382 - 7472285
Alignment:
Q  122 tgacatgttcataagt-tgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaacttat 218  Q
    ||||||||||||||   ||||||||||||||||| ||||||||||||||||||| | |   |||||| ||||| |||||||| |||||||||||||||    
T  7472382 tgacatgttcataaaactgttttcagcttattttcataagctctccaagatagcttatggaaacagcttatagattatacaaaaacaatttaacttat 7472285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 34290306 - 34290226
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaa 202  Q
    |||||| |||||||||||||||||||||||||| ||||| ||| ||||||||| | | | |||||| ||||||||||||||    
T  34290306 tgacatattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagcttatacaa 34290226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 46252682 - 46252734
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  46252682 tgacatgttcataagttgttttcaggttattttcataagctctccaagatagc 46252734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 27820342 - 27820427
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaattta 212  Q
    |||||||||| | ||||||||||||||| ||||  ||||||||||||| | ||| |||||| |||||||||||||  |||||||||    
T  27820342 tgttcataagctattttcagcttattttcataaattctccaagatagcttataaaaacagcatatagcttatacataaacaattta 27820427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 7136998 - 7137078
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaa 202  Q
    |||||| |||||||||| ||||||||||||||| ||||| ||||||||||||| | | | |||||| ||||| ||||||||    
T  7136998 tgacatattcataagttattttcagcttattttcataagttctccaagatagcttatgaaaacagcttatagattatacaa 7137078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 10199408 - 10199460
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  10199408 tgacatgttcataagttgttttcagcttattttcataagctctctaaaatagc 10199460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 15361106 - 15361058
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  15361106 atgttcataagttgttttcagcttattttcataagctctccaggatagc 15361058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 28689452 - 28689504
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| |||||||||||||||||||||||| ||||||| |||||||||||    
T  28689452 tgacatgtccataagttgttttcagcttattttcataagctttccaagatagc 28689504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 31517740 - 31517788
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaaga 170  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  31517740 tgacatgttcataagctgttttcagcttattttcataagctctccaaga 31517788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 6292563 - 6292512
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| ||||    
T  6292563 tgacatgttcataagctgttttcagcttattttcataagctctccaaaatag 6292512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 8016327 - 8016276
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    |||||||||||||| ||||||||||||||||||  |||||||||||||||||    
T  8016327 tgacatgttcataacttgttttcagcttattttcctaagctctccaagatag 8016276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 38503470 - 38503517
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  38503470 tgttcataagttgttttcagcttattttcataagttctccaagatagc 38503517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 27140548 - 27140478
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctata 192  Q
    |||||||| |||||||||||||||||||||||  |||||||||||| |||||| | ||| |||||| ||||    
T  27140548 tgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 4622163 - 4622086
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttata 199  Q
    |||||||| |||||| |||||| |||||||||| | ||||||||||||||||||| |   |||||| |||||||||||    
T  4622163 tgacatgtccataagctgtttttagcttattttcacaagctctccaagatagcatatggaaacagcttatagcttata 4622086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 5886994 - 5887043
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagat 171  Q
    |||||||||||||||||||||||||||||||||  |||| ||||||||||    
T  5886994 tgacatgttcataagttgttttcagcttattttcgtaagttctccaagat 5887043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 25479651 - 25479599
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||||| |||||||||||||||||||| |||||||||| | ||||||    
T  25479651 tgacatgttcattagttgttttcagcttattttcataagctctctaggatagc 25479599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 37593684 - 37593736
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| ||| |||||    
T  37593684 tgacatgttcataagctgttttcagcttattttcataagctcttcaaaatagc 37593736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 200
Target Start/End: Original strand, 4700066 - 4700144
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatac 200  Q
    ||||||||| |  |||||||||||||||||||| |||||||||||| |||||  | ||| |||||  ||||||||||||    
T  4700066 tgacatgtttaggagttgttttcagcttattttcataagctctccaggatagtttataaaaacagtttatagcttatac 4700144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 39596648 - 39596578
Alignment:
Q  141 tttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaattt 211  Q
    ||||| |||||||| ||||||||||||||||||| | ||| | || | |||||||||||||| ||||||||    
T  39596648 tttcaacttatttttataagctctccaagatagcttataaaaccatcttatagcttatacaaaaacaattt 39596578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 3224493 - 3224416
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttata 199  Q
    |||||||| ||||||||||| |||||||||||| ||||| |||| |  ||||| | ||| |||| |||||||||||||    
T  3224493 tgacatgtccataagttgttctcagcttattttcataagttctctagaatagcttataaaaacaccctatagcttata 3224416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 3234022 - 3234107
Alignment:
Q  129 ttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaac 214  Q
    |||||||||| |||||  |||||||| ||||| ||||||| ||||| | ||| |||| | |||||| ||||||| |||||||||||    
T  3234022 ttcataagtttttttctacttattttcataagttctccaatatagcttataaaaacaacttatagcatatacaaaaacaatttaac 3234107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 14629970 - 14630043
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttata 199  Q
    ||||||||||||||||||||||||||||  ||||  ||||||||||||| | | | || ||| |||||||||||    
T  14629970 atgttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaatagcttatagcttata 14630043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 219
Target Start/End: Complemental strand, 43332538 - 43332457
Alignment:
Q  138 tgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaacttata 219  Q
    ||||||||||||||||| ||||||||| ||||||||| | | | |||||| || | ||||||||| | ||||||| ||||||    
T  43332538 tgttttcagcttattttaataagctcttcaagatagcttatgaaaacagcttacaacttatacaaaaccaatttagcttata 43332457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 45975753 - 45975680
Alignment:
Q  129 ttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaa 202  Q
    |||||||| ||||||||||||||||| ||||  ||||||||||||| | | | |||||| | ||||||||||||    
T  45975753 ttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaacagcttgtagcttatacaa 45975680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 47877179 - 47877134
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcca 167  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||    
T  47877179 tgacatgctcataagttgttttcagcttattttcataagctttcca 47877134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 7761611 - 7761651
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagct 162  Q
    |||||||| |||||||| |||||||||||||||||||||||    
T  7761611 tgacatgtccataagtttttttcagcttattttgataagct 7761651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 16981936 - 16981988
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| ||||||||||||| |||||||||  |||||||||||| ||||||    
T  16981936 tgacatgtccataagttgtttttagcttatttatataagctctccatgatagc 16981988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 28077073 - 28077121
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||||||||||||  |||||||||| || |||||    
T  28077073 atgttcataagttgttttcagcttatttcaataagctctctaaaatagc 28077121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 29007720 - 29007756
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagct 162  Q
    |||||||||||||||||||||||||||| ||||||||    
T  29007720 atgttcataagttgttttcagcttatttcgataagct 29007756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 35080069 - 35080121
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||| |||||| ||||||||| || |||||||||| ||||||    
T  35080069 tgacatgttcataagctgttttgagcttatttcgacaagctctccatgatagc 35080121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 37842355 - 37842407
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||||||||  |||||||||||||||| ||||| ||| |||||||||    
T  37842355 tgacatgttcataagcagttttcagcttatttttataagttcttcaagatagc 37842407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 43722328 - 43722380
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||| || ||||||||||||||||||| |||||||||| || |||||    
T  43722328 tgacatgttcttatgttgttttcagcttatttttataagctctcaaatatagc 43722380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 1565535 - 1565586
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    |||||||| |||||| ||||||||||||||||| || |||||||||| ||||    
T  1565535 tgacatgtgcataagctgttttcagcttattttcatgagctctccaaaatag 1565586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 165
Target Start/End: Complemental strand, 6659580 - 6659541
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctc 165  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  6659580 atgtccataagttgttttcagcttatttcgataagctctc 6659541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 24915058 - 24915145
Alignment:
Q  129 ttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||| | |||||| |||||||| | ||| ||||||||| ||| | | | |||||| |||||| ||||||| |||||||||||||    
T  24915058 ttcataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttatagcatatacaaaaacaatttaactt 24915145  T

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Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 30257753 - 30257702
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    ||||||||||||||| ||||||||||||||||  |||||| ||||| |||||    
T  30257753 tgacatgttcataagctgttttcagcttatttctataagccctccaggatag 30257702  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 152
Target Start/End: Complemental strand, 4549918 - 4549888
Alignment:
Q  122 tgacatgttcataagttgttttcagcttatt 152  Q
    |||||||||||||||||||||||||||||||    
T  4549918 tgacatgttcataagttgttttcagcttatt 4549888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 5276363 - 5276317
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaa 168  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||||    
T  5276363 tgacatgttcataagttgttttcaagttattttcttaagctctccaa 5276317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 10809415 - 10809321
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||| ||||  ||||||||||||||||| ||||| ||||||| |||||   | |||||| | ||||||||| |||| || | ||||||||    
T  10809415 tgacatgtttataatatgttttcagcttattttcataagttctccaatatagctgatgagaacaacttatagcttacacaaaaatactttaactt 10809321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 174
Target Start/End: Original strand, 12564509 - 12564551
Alignment:
Q  132 ataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||||||  ||||| |||||||||||||    
T  12564509 ataagttgttttcagcttatttccataagttctccaagatagc 12564551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 23902070 - 23902144
Alignment:
Q  125 catgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttata 199  Q
    ||||| |||||||||||||||||||| ||  |||||||||| |||||||| | | | |||| | |||||||||||    
T  23902070 catgtgcataagttgttttcagcttacttccataagctctctaagatagcttttgaaaacaacttatagcttata 23902144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 30371218 - 30371172
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaa 168  Q
    |||||||| |||||||||||||||||||||||  ||| |||||||||    
T  30371218 tgacatgtccataagttgttttcagcttatttcaatacgctctccaa 30371172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 35590898 - 35590944
Alignment:
Q  128 gttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||| |||||||||||||||||||  |||||||||||| ||||||    
T  35590898 gttcatcagttgttttcagcttatttccataagctctccatgatagc 35590944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 38170690 - 38170732
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctct 164  Q
    |||||||||||||||||||||||||||| ||||  ||||||||    
T  38170690 tgacatgttcataagttgttttcagcttgttttcctaagctct 38170732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 2294972 - 2294887
Alignment:
Q  131 cataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||| |||||||| ||||||||  |||| ||||||||||||  | | | || ||| |||||||||| ||| |||||||||||||    
T  2294972 cataagctgttttcaccttattttcgtaagttctccaagatagtttatgaaaatagcttatagcttatccaaaaacaatttaactt 2294887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 2777955 - 2777882
Alignment:
Q  129 ttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaa 202  Q
    ||||||||  |||||||||||||||| ||||| |||||||| || | | | | |||||| ||||||||||||||    
T  2777955 ttcataagccgttttcagcttattttcataagttctccaagttaacttattaaaacagcttatagcttatacaa 2777882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 19389968 - 19389919
Alignment:
Q  126 atgttcataagttgttttc-agcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||  |||||||||| | |||||||||||||||||    
T  19389968 atgttcataagttgttttttagcttattttcacaagctctccaagatagc 19389919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 27963370 - 27963415
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcca 167  Q
    |||||||| ||||||||||||| |||||||||  ||||||||||||    
T  27963370 tgacatgtccataagttgtttttagcttatttatataagctctcca 27963415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 38247059 - 38247104
Alignment:
Q  128 gttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    |||||||||||||||||| |||| ||| |||||||||||| |||||    
T  38247059 gttcataagttgttttcaacttacttttataagctctccacgatag 38247104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 44422769 - 44422692
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttata 199  Q
    |||||||| |||||| ||  | ||||||||||| |||||||||||| |||||| | ||| || ||| |||||||||||    
T  44422769 tgacatgtccataagctgactacagcttattttcataagctctccaggatagcttataaaaatagcttatagcttata 44422692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 489125 - 489065
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagc 187  Q
    |||||||||| ||||||||||||||||| | || ||||||| |||||| ||| | ||||||    
T  489125 tgttcataagctgttttcagcttatttttacaatctctccatgatagcttgtgaaaacagc 489065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 4699615 - 4699659
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcc 166  Q
    ||||||||||||||| |||||| |||||||||  |||||||||||    
T  4699615 tgacatgttcataagctgtttttagcttatttctataagctctcc 4699659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 12477287 - 12477339
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| |||||||||||||||||||||||  |||  ||||||| ||||||    
T  12477287 tgacatgtccataagttgttttcagcttatttccatacactctccatgatagc 12477339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 13363443 - 13363475
Alignment:
Q  141 tttcagcttattttgataagctctccaagatag 173  Q
    |||||||||||||| ||||||||||||||||||    
T  13363443 tttcagcttatttttataagctctccaagatag 13363475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 23445404 - 23445312
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaac 214  Q
    ||||||||||||||| | |||||| | | |||| | | ||||||||||||||| | | | |||| | ||| |||||||||| |||||||||||    
T  23445404 tgacatgttcataagctattttcaacatgttttaagacgctctccaagatagcttatgaaaacaacttatggcttatacaaaaacaatttaac 23445312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 24460407 - 24460459
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||| ||||| |||||||||||  ||||||||| | ||||||    
T  24460407 tgacatgttcataagctgtttccagcttatttttgtaagctctcaaggatagc 24460459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 29635417 - 29635385
Alignment:
Q  122 tgacatgttcataagttgttttcagcttatttt 154  Q
    ||||||||| |||||||||||||||||||||||    
T  29635417 tgacatgtttataagttgttttcagcttatttt 29635385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 35925760 - 35925708
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||| |||||||| |||||||  |||| ||||||| ||||||    
T  35925760 tgacatgttcataagctgttttcaacttatttccataaactctccatgatagc 35925708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 48748321 - 48748357
Alignment:
Q  128 gttcataagttgttttcagcttattttgataagctct 164  Q
    ||||||||||||||||||||||||||  |||||||||    
T  48748321 gttcataagttgttttcagcttatttccataagctct 48748357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 49517131 - 49517091
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagct 162  Q
    |||||||| ||||||| |||||||| |||||||||||||||    
T  49517131 tgacatgtccataagtggttttcaggttattttgataagct 49517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 35379016 - 35379068
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  35379016 tgacttgttcataagttgttttcagcttattttcataagctctccaagatagc 35379068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 7928304 - 7928357
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaa 180  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  7928304 tgttcataagttgttttcagcttattttcataagttctccaagatagcctgtaa 7928357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 216
Target Start/End: Original strand, 43910999 - 43911093
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||||||||||||||||||||||| | | ||||| ||||||||||| | | | |||| | ||| ||||||||   |||||||||||||    
T  43910999 tgacatgttcataagttgttttcagcttattatcacaagctttccaagatagcttttgaaaacaacttatggcttatacggaaacaatttaactt 43911093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 12313176 - 12313225
Alignment:
Q  125 catgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||||||    
T  12313176 catgttcataagttgatttcaccttattttcataagctctccaagatagc 12313225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 16867809 - 16867736
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagct 195  Q
    |||||| ||||||||||||||||| |||||||  ||||||||||||||||||| ||| | |||| | |||||||    
T  16867809 tgacatattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaacaccttatagct 16867736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 19333323 - 19333376
Alignment:
Q  120 actgacatgttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    ||||||||||||||||| |||| |||||||||||| ||||||||||||| ||||    
T  19333323 actgacatgttcataagctgttctcagcttattttcataagctctccaatatag 19333376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 15120253 - 15120201
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||||| || |||||| ||||||||||||||||||||||| ||||||    
T  15120253 tgacatgttcattagctgttttaagcttattttgataagctctccatgatagc 15120201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 29316775 - 29316827
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||| ||||||||||||||  ||||| |||||||||||||    
T  29316775 tgacatgttcataagttcttttcagcttatttccataagttctccaagatagc 29316827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 43199784 - 43199836
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||| ||||||||||||||||||| ||| |||||| ||||||||||||    
T  43199784 tgacatgtttataagttgttttcagcttaatttcataagccctccaagatagc 43199836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 44443387 - 44443339
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  44443387 atgttcataagttgttttcagcttattttcatatgctctcaaagatagc 44443339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 3611289 - 3611202
Alignment:
Q  129 ttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||  |||||| |||||||||| ||||| ||||||||||||| ||| | ||||| |||||   ||||||| |||||||||||||    
T  3611289 ttcataaactgtttttagcttattttcataagttctccaagatagcttgtgaaaacagtctataaactatacaaaaacaatttaactt 3611202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 42907429 - 42907335
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagatagc--atgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||||| || ||||||| |||||| |||||||||||||| ||||  |||| | |||| | ||||||||| || | |||||||||||||    
T  42907429 acatgttcataagctgctttcagcctattttcataagctctccaagttagcatatgtgaaaacaacttatagcttaaacgaaaacaatttaactt 42907335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 1625966 - 1625876
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||| ||||||||||| |||||  |||| ||||||||||||| | | | |||| | |||| ||||||| | |||||||||||||    
T  1625966 atgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaacaacttataacttatacgaaaacaatttaactt 1625876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 29628748 - 29628830
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaat 209  Q
    ||||||||| |||||||||||||||||  ||||  | ||||||||||| | | |||||| | |||||||||||||| ||||||    
T  29628748 tgttcataaattgttttcagcttatttccataaattttccaagatagcttatgagaacaacttatagcttatacaaaaacaat 29628830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 41809245 - 41809303
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaa 180  Q
    |||||||||||||||||||||| |||||||||  ||||||| || |||||||| |||||    
T  41809245 tgacatgttcataagttgtttttagcttatttccataagctttctaagatagcttgtaa 41809303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 26626938 - 26626849
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||||  ||||||||| ||||||| ||||| ||| ||||||||| | | | |||||| | |||||||||| | |||||||||||||    
T  26626938 tgttcataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaacagcttctagcttatacgaaaacaatttaactt 26626849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 35378532 - 35378581
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagat 171  Q
    |||| |||||||||||| ||||||||||||||| ||||||| ||||||||    
T  35378532 tgacttgttcataagttattttcagcttattttcataagctatccaagat 35378581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 38078413 - 38078462
Alignment:
Q  125 catgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||| |||| ||||  |||||||||||||||||||    
T  38078413 catgttcataagttgttttgagctcatttacataagctctccaagatagc 38078462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 1893281 - 1893333
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| |||||||| ||||||||||||||| | ||| |||||||||||||    
T  1893281 tgacatgtacataagttattttcagcttattttcacaagttctccaagatagc 1893333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 12464491 - 12464567
Alignment:
Q  140 ttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||||||| | ||| ||||||||||||| | | | || ||| |||||| ||||||| |||||||||||||    
T  12464491 ttttcagcttattttcacaagttctccaagatagcttatgaaaatagcttatagcatatacaaaaacaatttaactt 12464567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 34652036 - 34652088
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| |||||| |||||||| |||||||  |||||||||||||||||||    
T  34652036 tgacatgtccataagctgttttcaacttatttccataagctctccaagatagc 34652088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 41407668 - 41407629
Alignment:
Q  128 gttcataagttgttttcagcttattttgataagctctcca 167  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  41407668 gttcataagttgttttcagcttatttttataagttctcca 41407629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 41817238 - 41817187
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    ||||||||| |||| |||||||||||||||||  |||||||||||| |||||    
T  41817238 tgacatgttgataatttgttttcagcttatttccataagctctccaggatag 41817187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 212
Target Start/End: Complemental strand, 680573 - 680483
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaattta 212  Q
    ||||||||| ||||  ||||||||||||||||| | ||| ||| ||||||||| | | | || ||| |||||||||||| | |||||||||    
T  680573 tgacatgtttataaactgttttcagcttattttcacaagttcttcaagatagcttatgaaaatagcttatagcttatacgaaaacaattta 680483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 1056129 - 1056171
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctct 164  Q
    |||||||||||| ||||||||||||||| |||| |||||||||    
T  1056129 tgacatgttcattagttgttttcagcttgttttcataagctct 1056171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 18066190 - 18066104
Alignment:
Q  130 tcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||| | |||||| ||||||||  |||| ||||||||||||| | | | |||||| |||||||||||  | |||||||||||||    
T  18066190 tcataagctattttcaccttattttcttaagttctccaagatagcttatgaaaacagcttatagcttatatgaaaacaatttaactt 18066104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 28677659 - 28677705
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaa 168  Q
    |||||| |||||||||||||||| ||||||||  |||||||||||||    
T  28677659 tgacattttcataagttgttttcggcttatttccataagctctccaa 28677705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 43065450 - 43065500
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagata 172  Q
    |||||||| ||||| |||||||||||||||||  |||||||||||| ||||    
T  43065450 tgacatgtccataaattgttttcagcttatttcaataagctctccacgata 43065500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 1810716 - 1810644
Alignment:
Q  140 ttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaa 213  Q
    ||||||||||||||| |||| |||| ||||||||| | ||| ||||  ||||| ||||||||| ||||||||||    
T  1810716 ttttcagcttattttcataaactcttcaagatagcttataaaaaca-actataacttatacaaaaacaatttaa 1810644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 10198480 - 10198557
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttata 199  Q
    ||||||||||||||| |||| |||||||||||  |||| ||||| | |||||  | ||| ||||||||||| ||||||    
T  10198480 tgacatgttcataagctgttgtcagcttatttccataatctctctaggatagattataaaaacagcctatatcttata 10198557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 10567127 - 10567082
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcca 167  Q
    ||||||| ||||||||||||||||||| ||||| | ||||||||||    
T  10567127 tgacatgatcataagttgttttcagctaattttcacaagctctcca 10567082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 12147527 - 12147482
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcca 167  Q
    |||||||||||||| |||||||||| ||||||| ||||||| ||||    
T  12147527 tgacatgttcataaattgttttcagtttattttcataagctatcca 12147482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 14666618 - 14666541
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttata 199  Q
    ||||||||||||| |||||||||| |||||||| ||||||   |||||||||| ||| | |||| | |||| ||||||    
T  14666618 tgacatgttcataggttgttttcaccttattttcataagcataccaagatagcttgtgaaaacaacttataacttata 14666541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 35329829 - 35329870
Alignment:
Q  133 taagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||| ||||||||||  |||||||||||||||||||    
T  35329829 taagttgtttccagcttatttccataagctctccaagatagc 35329870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 40158788 - 40158743
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcca 167  Q
    ||||||||| ||||||||||||||||||| ||  ||||||||||||    
T  40158788 tgacatgtttataagttgttttcagcttaattacataagctctcca 40158743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 8017500 - 8017452
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||| |||||||| || |||||| ||||| |||||||||||||    
T  8017500 atgttcataatttgttttctgcgtattttcataagttctccaagatagc 8017452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 9530728 - 9530780
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| |||||||| |||| |||||| ||| |||||||||||| ||||||    
T  9530728 tgacatgtccataagttatttttagcttactttcataagctctccaggatagc 9530780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 9875465 - 9875517
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||| |||||||| ||||||||||||||||| | ||||| |||| ||||||    
T  9875465 tgacatattcataagctgttttcagcttattttcacaagctttccatgatagc 9875517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 11063558 - 11063518
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagct 162  Q
    |||||||| ||||||||||||| |||||||||| |||||||    
T  11063558 tgacatgtccataagttgtttttagcttattttcataagct 11063518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 11488339 - 11488295
Alignment:
Q  130 tcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||||||||  |||| ||||||| ||||||    
T  11488339 tcataagttgttttcagcttatttgcataatctctccaggatagc 11488295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 15978047 - 15978003
Alignment:
Q  130 tcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||| |||||||||||||||||| |||| |||||||| |||||    
T  15978047 tcataaattgttttcagcttattttcataatctctccaaaatagc 15978003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 33192272 - 33192220
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||| | |||||| |||||||||||||| || |||||||||||| ||||||    
T  33192272 tgacatatccataagctgttttcagcttatatttataagctctccaggatagc 33192220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 42458008 - 42457924
Alignment:
Q  132 ataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||||||||||||||| ||| | |||| |||||||| | | |  |||||  | |||||| |||| |||||||||||||    
T  42458008 ataagttgttttcagcttattttcatatgttctctaagatagcttatgaatacagctaagagcttaaacaaaaacaatttaactt 42457924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 43717137 - 43717177
Alignment:
Q  123 gacatgttcataagttgttttcagcttattttgataagctc 163  Q
    ||||| |||||| ||||||||||||||||||| ||||||||    
T  43717137 gacattttcataggttgttttcagcttattttcataagctc 43717177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 27028894 - 27028807
Alignment:
Q  129 ttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||| | ||||||||||||||| ||||||||||||||||||| | | | |||||| |||||| ||||||  |||||||||||||    
T  27028894 ttcataagctattttcagcttattttcataagctctccaagatagcttatgaaaacagcttatagcatatacacaaacaatttaactt 27028807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 42215084 - 42215134
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  42215084 acatgttcataagttgttttcagcttatttacataagctctccaagatagc 42215134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 20672820 - 20672768
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||| ||||||    
T  20672820 tgacatgttcataagctgttttcagcttattttcataagctctccaggatagc 20672768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 2482927 - 2482841
Alignment:
Q  128 gttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||| ||||||||||||||||  ||||| | ||||||||||||||  | |||||| |||||||||||||| |||| ||| ||||    
T  2482927 gttcataagctgttttcagcttatttctataagttatccaagatagcatg--aaaacagcttatagcttatacaaaaacattttgactt 2482841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 30389169 - 30389092
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttata 199  Q
    ||||||||||||||||||||||||||||||||| ||||| |||| | || ||| | | | |||||| |||||||||||    
T  30389169 tgacatgttcataagttgttttcagcttattttcataagttctctaggaaagcttatgaaaacagcgtatagcttata 30389092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 21653151 - 21653099
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||| ||||||||| | ||||||||||||||| |||||||||||||||||||    
T  21653151 tgacacgttcataagctattttcagcttattttcataagctctccaagatagc 21653099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 33714236 - 33714288
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||| |||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  33714236 tgacttgttcataagctgttttcagcttatttttataagctctcccagatagc 33714288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 779061 - 779112
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    |||||||||||||||||||||||| ||||||||| ||  |||||||||||||    
T  779061 tgacatgttcataagttgttttcatcttattttggtacactctccaagatag 779112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 9956819 - 9956865
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    ||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  9956819 tgttcataagtagttttcagcttattttcataagttctccaagatag 9956865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 216
Target Start/End: Original strand, 37353249 - 37353343
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||| |||||||  ||||||||| ||||||| |||||||||| |||||||| |   | |||||| |||||| || |||| |||||||||||||    
T  37353249 tgacatattcataaactgttttcagattattttcataagctctcaaagatagcttaagaaaacagcttatagcatacacaaaaacaatttaactt 37353343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 42215306 - 42215360
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcat 176  Q
    |||| |||||||||| ||||||||||||||||  |||||||||||| ||||||||    
T  42215306 tgacttgttcataagctgttttcagcttatttacataagctctccaggatagcat 42215360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 28769343 - 28769416
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttata 199  Q
    |||| |||||||||||||||||||||||  |||| |||||||| ||||| | | | |||||| |||||||||||    
T  28769343 atgtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttata 28769416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 30918176 - 30918135
Alignment:
Q  129 ttcataagttgttttcagcttattttgataagctctccaaga 170  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  30918176 ttcataagttgttttcagcttatttccataagctctccaaga 30918135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 11569457 - 11569509
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| |||||||||||||||||||||||| | || ||||||| ||||||    
T  11569457 tgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagc 11569509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 25869266 - 25869318
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| |||||||||||||||||||||||  |||| ||||||| ||||||    
T  25869266 tgacatgtccataagttgttttcagcttatttccataaactctccatgatagc 25869318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 7918447 - 7918498
Alignment:
Q  123 gacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||||||| ||||| || |||||||  |||||||||||||||||||    
T  7918447 gacatgttcataagctgtttccaacttatttcaataagctctccaagatagc 7918498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 8062390 - 8062319
Alignment:
Q  131 cataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaa 202  Q
    |||||| ||||||||||||||||  |||| ||||| |||||||| | | | |||||| ||||||||||||||    
T  8062390 cataagatgttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagcttatacaa 8062319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 8066849 - 8066892
Alignment:
Q  131 cataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||||||||||||||||| |||| |||| |||||||||    
T  8066849 cataagttgttttcagcttattttaataaactctacaagatagc 8066892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 41606903 - 41606946
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctc 165  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||    
T  41606903 tgacatgttcaaaagttgttttcagcttatttccataagctctc 41606946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 43504816 - 43504733
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatt 210  Q
    |||| ||||| ||||||||||||||||  ||||| ||||||||||||| | ||| |||| | |||||||| ||| | |||||||    
T  43504816 tgtttataagctgttttcagcttatttccataagttctccaagatagcttataaaaacatcttatagcttctactaaaacaatt 43504733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 44236824 - 44236875
Alignment:
Q  123 gacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||| || |||||| ||||||||||||||| ||||||||||||| |||||    
T  44236824 gacatgctcttaagttattttcagcttattttcataagctctccaatatagc 44236875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 152
Target Start/End: Original strand, 2594997 - 2595027
Alignment:
Q  122 tgacatgttcataagttgttttcagcttatt 152  Q
    |||||||||||||||||||||||||||||||    
T  2594997 tgacatgttcataagttgttttcagcttatt 2595027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 4281616 - 4281570
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaa 168  Q
    |||||||||||||||||||||||| |||||||| ||||  |||||||    
T  4281616 tgacatgttcataagttgttttcatcttattttcataaattctccaa 4281570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 10358648 - 10358570
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatac 200  Q
    |||||||||||||||| ||||||   ||||||| | ||| ||||||| ||||| |||||||| | | ||||||||||||    
T  10358648 tgacatgttcataagtcgttttcgatttattttcacaagttctccaaaatagcttgtaagaataacttatagcttatac 10358570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 11185289 - 11185239
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||||||||||||||| |||||||  || ||||||||| ||||||    
T  11185289 acatgttcataagttgttttcaacttatttccatcagctctccatgatagc 11185239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 11494033 - 11493983
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||| ||| ||||||||| ||| ||||||||| |||||||||    
T  11494033 acatgttcataagctgtgttcagcttactttcataagctcttcaagatagc 11493983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 3536950 - 3536995
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagata 172  Q
    ||||||||| |||||||||||||||||  ||||| |||||||||||    
T  3536950 tgttcataaattgttttcagcttatttccataagttctccaagata 3536995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 12851244 - 12851203
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctc 165  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||    
T  12851244 acatgttcataagatgttttcggcttattttcataagctctc 12851203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 38036128 - 38036201
Alignment:
Q  138 tgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaattt 211  Q
    ||||||||||||||||  |||||||||||||||||||   | | |||||  ||||||||| |||| ||||||||    
T  38036128 tgttttcagcttatttcaataagctctccaagatagctaatcaaaacagtttatagcttacacaaaaacaattt 38036201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 41620291 - 41620356
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagc 187  Q
    |||||||| |||||||||||||| ||||||||| | ||||||  ||||||||| | ||| ||||||    
T  41620291 tgacatgtccataagttgttttccgcttattttcaaaagctcgacaagatagcttataaaaacagc 41620356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 5069765 - 5069717
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagata 172  Q
    ||||||||||||||  ||||||||||||||| ||||||| || ||||||    
T  5069765 acatgttcataagtcattttcagcttattttcataagctttcgaagata 5069717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 218
Target Start/End: Complemental strand, 10114543 - 10114463
Alignment:
Q  138 tgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaacttat 218  Q
    ||||||||||||||||| ||| | ||||||| |||||   | | |||||| |||||||||||| | ||||||| |||||||    
T  10114543 tgttttcagcttattttcatatgttctccaatatagctaatgaaaacagcttatagcttataccaaaacaattcaacttat 10114463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 11494208 - 11494164
Alignment:
Q  130 tcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||| || |||||||||||||| ||||||||| |||||||||    
T  11494208 tcataagctgctttcagcttattttcataagctcttcaagatagc 11494164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 12559040 - 12558996
Alignment:
Q  128 gttcataagttgttttcagcttattttgataagctctccaagata 172  Q
    |||||||||||||||| | |||||||| ||||||| |||||||||    
T  12559040 gttcataagttgtttttaacttattttcataagctatccaagata 12558996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 27754474 - 27754422
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||| | ||||||||  ||||||||||||| ||||||||||||| |||||    
T  27754474 tgacatgattataagttgcgttcagcttattttcataagctctccaaaatagc 27754422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 28784796 - 28784847
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||| | ||||||||||||||| | |||||||| ||||||||    
T  28784796 tgacatgttcataagct-ttttcagcttatttttacaagctctctaagatagc 28784847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 40665499 - 40665449
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagata 172  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  40665499 tgacatgttcataagctgttttcagcttatttttataagctctccaagata 40665449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 33883750 - 33883802
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  33883750 tgacatgttcataagttgttttcagcttattttcataagttctctaagatagc 33883802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 52619073 - 52618979
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||||||| | |||||| |||||||| | ||||||| ||||||||| ||| | |||||| |||| ||||||  | |||||||||||||    
T  52619073 tgacatgttcataagctattttcaccttattttcacaagctcttcaagatagcttgtgaaaacagcttataacttatatgaaaacaatttaactt 52618979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 20669242 - 20669190
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||| ||||||| ||||||||  |||||||||||||||||||    
T  20669242 tgacatgttcataagctgttttccgcttatttacataagctctccaagatagc 20669190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 47513723 - 47513671
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||| ||||||||||||||||||  ||||||| |||||||||||||||||||    
T  47513723 tgacacgttcataagttgttttcaatttattttcataagctctccaagatagc 47513671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 54837034 - 54837086
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||||||| |||||||| ||||||||| ||||||| |||||||||||    
T  54837034 tgacatgttcataacttgttttccgcttatttttataagctgtccaagatagc 54837086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 20880539 - 20880452
Alignment:
Q  129 ttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||| | |||| |||||||||| ||||| ||||||| ||||| | ||| |||||  |||||| ||||||| |||||||||||||    
T  20880539 ttcataagcttttttgagcttattttcataagttctccaatatagcttttaaaaacagtttatagcatatacaaaaacaatttaactt 20880452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 36139948 - 36139897
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||| ||||||||    
T  36139948 tgacatgttcacaagctgttttcagcttattttcataagctcttcaagatag 36139897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 1816653 - 1816559
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||| |||||| | ||||||||||||||||||||||||||||||  ||||| | | | |||| | |||| ||||||||| |||| ||| ||||    
T  1816653 tgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttatacaaaaacagtttgactt 1816559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 3044259 - 3044313
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcat 176  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||| | ||||||    
T  3044259 tgacatgttcataagctgttttcaacttattttcataagctctccaggttagcat 3044313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 21862177 - 21862227
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||| |||||||||||||||||||||||  ||||||||||| |||||||    
T  21862177 acatgtccataagttgttttcagcttatttccataagctctcccagatagc 21862227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 200
Target Start/End: Original strand, 39602210 - 39602288
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatac 200  Q
    |||||||||||||| ||||||||| |||||||| ||||| |||| |||||||| | | | |||||| |||| |||||||    
T  39602210 tgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaacagcttataacttatac 39602288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 45432939 - 45432981
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctct 164  Q
    ||||||||||||||||||||||||||||||||  |||||||||    
T  45432939 tgacatgttcataagttgttttcagcttatttccataagctct 45432981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 2719529 - 2719445
Alignment:
Q  131 cataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||| | | | |||||  ||||||||| |||| |||||||| ||||    
T  2719529 cataagttgttctcagcttattttcataagttctccaagatagcttatgaaaacagtttatagcttaaacaa-aacaatttcactt 2719445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 21367732 - 21367643
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||| ||| ||||||||||||||||| ||||| ||||||||||||| | | | |||| | ||||  |||||| | |||||||||||||    
T  21367732 tgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttatacattatacgaaaacaatttaactt 21367643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 25925812 - 25925767
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcca 167  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||    
T  25925812 tgacatgttcataagctgttttcaacttattttcataagctctcca 25925767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 30573917 - 30573966
Alignment:
Q  125 catgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||||| |||||||||||||| || || ||||||||||||||||    
T  30573917 catgttcataagctgttttcagcttatgttcatcagctctccaagatagc 30573966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 36887574 - 36887525
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagat 171  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||| ||||||    
T  36887574 tgacatgttcataagatgttttcagcttattttcataagttcttcaagat 36887525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 23808064 - 23808116
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||| || ||||||||| |||||||| |||| ||||||||||||||    
T  23808064 tgacatgttcacaaattgttttcatcttattttcataaactctccaagatagc 23808116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 24785275 - 24785223
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||||||||||||||| |||||||||  |||||||||| | ||||||    
T  24785275 tgacatgttcataagttgtttttagcttatttacataagctctcgaggatagc 24785223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 30443945 - 30443869
Alignment:
Q  140 ttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||||||| ||||| ||||||| ||||  | ||| |||||| |||||| ||||||| | |||||||||||    
T  30443945 ttttcagcttattttcataagttctccaatatagtttataaaaacagcttatagcatatacaaaagcaatttaactt 30443869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 34924538 - 34924590
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||| || |||| ||||||||||||||||||| |||||||||| ||||||||    
T  34924538 tgacaagtccatatgttgttttcagcttattttcataagctctctaagatagc 34924590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 37273204 - 37273152
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| ||||||||||||||| |||||||  ||||| |||||||||||||    
T  37273204 tgacatgtccataagttgttttcaacttatttccataagttctccaagatagc 37273152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 41633430 - 41633378
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||  |||| |||||||||||||||||| ||||||||||||| |||||    
T  41633430 tgacatgtctataaattgttttcagcttattttcataagctctccaaaatagc 41633378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 46031053 - 46031009
Alignment:
Q  129 ttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||||    
T  46031053 ttcataagctgttttcagcttattttaataagttctccaagatag 46031009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 47249486 - 47249538
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||||||  ||||||||| |||||  ||||||||||||    
T  47249486 tgacatgttcataagttgtttttggcttattttcataagtcctccaagatagc 47249538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 34954152 - 34954101
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    |||||||||||| || ||||||||||||||||| ||||||| |||| |||||    
T  34954152 tgacatgttcatgagctgttttcagcttattttcataagctatccatgatag 34954101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 36101638 - 36101587
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||| || |||||    
T  36101638 tgacatgttcacaagctgttttcagcttattttcataagctcttcaggatag 36101587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 50952403 - 50952352
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    ||||||||||||||  |||||| |||||||||  ||||||||||||||||||    
T  50952403 tgacatgttcataaactgttttaagcttatttccataagctctccaagatag 50952352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 402547 - 402633
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaa 213  Q
    |||||||||| ||||||||||||| ||| | ||| ||| ||||||||  | ||| |||||| |||| ||||||| | ||||||||||    
T  402547 tgttcataagctgttttcagcttaatttcacaagttcttcaagatagattataaaaacagcttataacttatacgaaaacaatttaa 402633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 2318713 - 2318667
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaaga 170  Q
    ||||| ||| ||||||||||||||||||||  |||||||||||||||    
T  2318713 acatggtcagaagttgttttcagcttatttctataagctctccaaga 2318667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 23793644 - 23793602
Alignment:
Q  132 ataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||||||  ||||||| |||||||||||    
T  23793644 ataagttgttttcagcttatttctataagctttccaagatagc 23793602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 34414793 - 34414835
Alignment:
Q  131 cataagttgttttcagcttattttgataagctctccaagatag 173  Q
    |||||||||||||||||||||||| |||| ||||||| |||||    
T  34414793 cataagttgttttcagcttattttcataaactctccatgatag 34414835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 48991912 - 48991870
Alignment:
Q  131 cataagttgttttcagcttattttgataagctctccaagatag 173  Q
    |||||||||||||||||||||||| |||| |||||||| ||||    
T  48991912 cataagttgttttcagcttattttcataatctctccaaaatag 48991870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 52440662 - 52440712
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagata 172  Q
    |||||||||||||||||||||||| || ||||| ||||| ||| |||||||    
T  52440662 tgacatgttcataagttgttttcaactaattttcataagttcttcaagata 52440712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 36200166 - 36200105
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaa 183  Q
    |||||||| |||||||||||||||||||||||  || |||||| || |||||| | ||||||    
T  36200166 tgacatgtccataagttgttttcagcttatttccatgagctctacaggatagcttataagaa 36200105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 37825192 - 37825147
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcca 167  Q
    |||||||| |||||||||||||||| ||||||  ||||||||||||    
T  37825192 tgacatgtccataagttgttttcaggttatttccataagctctcca 37825147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 41724282 - 41724229
Alignment:
Q  122 tgacatgttcataagttgttttcagcttatttt-gataagctctccaagatagc 174  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| | ||||||    
T  41724282 tgacatgtccataagttgttttcagcttattttatataagctctcaaggatagc 41724229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 54180780 - 54180825
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcca 167  Q
    |||||||| ||||||||||||| |||||||||  ||||||||||||    
T  54180780 tgacatgtccataagttgtttttagcttatttatataagctctcca 54180825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 23785316 - 23785248
Alignment:
Q  131 cataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttata 199  Q
    ||||||||||||||||||| |||  |||||||||||| || ||| ||| | |||||  |||||||||||    
T  23785316 cataagttgttttcagcttgtttccataagctctccatgagagcttgtgaaaacagtttatagcttata 23785248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 27787079 - 27787027
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagatagcat 176  Q
    ||||||||||||| ||||||||||||  ||| || || |||||||||||||||    
T  27787079 acatgttcataagctgttttcagcttgatttcattagttctccaagatagcat 27787027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 41057224 - 41057172
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||| ||||||||||||| | ||||| |||| || |||||    
T  41057224 tgacatgttcataagttattttcagcttattatcataagttctctaatatagc 41057172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 42745108 - 42745068
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagct 162  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  42745108 tgacatgttcataagttgttttcatcttatttccataagct 42745068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 45541641 - 45541589
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||| ||||||||| ||||| | ||||| | |||||||||||    
T  45541641 tgacatgttcataagctgttttcaggttattctcataagttatccaagatagc 45541589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 46886697 - 46886785
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaact 215  Q
    ||||| |||||| | ||||| ||||||| | ||| ||||||||||||| | | | |||||| ||||||| |||||| || |||||||||    
T  46886697 tgttcgtaagttatgttcaggttattttcaaaagttctccaagatagcttatgaaaacagcttatagctcatacaaaaataatttaact 46886785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 48048982 - 48049034
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| |||||| ||||||||||||||||  |||| ||| ||||||||||    
T  48048982 tgacatgtccataagctgttttcagcttatttccataacctccccaagatagc 48049034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 51130820 - 51130768
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| ||||||||| |||||||||||||| |  ||||||||| ||||||    
T  51130820 tgacatgtccataagttgctttcagcttattttcaatagctctccatgatagc 51130768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 7244750 - 7244698
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||| |||||    
T  7244750 tgacatgctcataagttgttttcagcttattttcataagctctccaatatagc 7244698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 35267432 - 35267382
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagata 172  Q
    ||||||||||||| ||||||||||||||||||  |||||||||||||||||    
T  35267432 tgacatgttcataggttgttttcagcttatttctataagctctccaagata 35267382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 9423594 - 9423646
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||||||||||||||||||  | |||||||||| ||||||    
T  9423594 tgacatgttcataagttgttttcagcttatttcaagaagctctccaggatagc 9423646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 21247996 - 21247944
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttga-taagctctccaagatag 173  Q
    |||||||||||||||||||||| |||||||||| | |||||||||||||||||    
T  21247996 tgacatgttcataagttgttttaagcttattttcagtaagctctccaagatag 21247944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 39566209 - 39566257
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagata 172  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||    
T  39566209 acatgtccataagttgttttcagcttattctgataagctctcaaagata 39566257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 25670586 - 25670636
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagata 172  Q
    ||||||||| |||| |||||||||||||||||| | |||||||||||||||    
T  25670586 tgacatgttaataaattgttttcagcttattttcacaagctctccaagata 25670636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 31771797 - 31771703
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||||||| ||||  || ||||||||||  |||||| ||||| |||| ||| | | |||||| |||||||||||||| |||| ||||||||    
T  31771797 tgacatgttcatgagtttattacagcttatttccataagcactccacgataacatatgaaaacagcttatagcttatacaaaaacagtttaactt 31771703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 22551405 - 22551454
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagat 171  Q
    ||||||||||| | ||||||||||||||||||  ||||||||||||||||    
T  22551405 tgacatgttcaaatgttgttttcagcttatttacataagctctccaagat 22551454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 25596092 - 25596051
Alignment:
Q  133 taagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||| |||||||| |||||||||||||||||||    
T  25596092 taagttgttttcaacttattttcataagctctccaagatagc 25596051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 33871319 - 33871269
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  33871319 tgacatgttcataagttgttttgagcttattt--atatgctctccaagatagc 33871269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 35007665 - 35007617
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    ||||||||||||||||||||||||||||||| | |||||||| |||||||    
T  35007665 acatgttcataagttgttttcagcttattttca-aagctctcaaagatag 35007617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 39907870 - 39907781
Alignment:
Q  125 catgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaac 214  Q
    ||||||||| || ||||||||||||||||| || || |||| |||||||  | | | |||||  |||||||||||||| |||||||||||    
T  39907870 catgttcattagctgttttcagcttattttcattagttctctaagatagtttatgaaaacagtttatagcttatacaaaaacaatttaac 39907781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 46082106 - 46082061
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcca 167  Q
    |||||||  |||||||||||||||||||||||| ||||||||||||    
T  46082106 tgacatgaccataagttgttttcagcttattttcataagctctcca 46082061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 529445 - 529393
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||| ||||||||| |||||||| | |||||| |||||||||||||||||||    
T  529445 tgacaagttcataagctgttttcaacatattttcataagctctccaagatagc 529393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 24363601 - 24363653
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| |||||||||||||||||||||||  |||| ||||||| ||||||    
T  24363601 tgacatgtccataagttgttttcagcttatttccataacctctccaggatagc 24363653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 43250699 - 43250751
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||| |||||||||||||| |||| || ||||||||||||| |||||    
T  43250699 tgacatgttcgtaagttgttttcagtttatattcataagctctccaaaatagc 43250751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 44822019 - 44821935
Alignment:
Q  132 ataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||||||||| |||||||| ||||| ||||||  ||||| | | | |||||| |||| ||||||||| |||||||| ||||    
T  44822019 ataagttgttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttatacaaaaacaatttgactt 44821935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 27378836 - 27378879
Alignment:
Q  130 tcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    ||||||||||||||||| ||||||| |||||||||||| |||||    
T  27378836 tcataagttgttttcagtttattttcataagctctccaggatag 27378879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 48917344 - 48917398
Alignment:
Q  122 tgacatgttcataagttgtttt--cagcttattttgataagctctccaagatagc 174  Q
    ||||||||||| ||||||| ||  ||||||||||| |||||||||||||||||||    
T  48917344 tgacatgttcacaagttgtgtttccagcttattttcataagctctccaagatagc 48917398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 12110430 - 12110336
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||| ||  |||||| || ||||||| ||||| ||| ||||||||| | | | |||||| |||||||||||| | |||||||| ||||    
T  12110430 tgacatgttcacaaactgtttttagattattttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaaacaatttgactt 12110336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 42656563 - 42656513
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||  ||||| | ||||||||| |||||||||||||||||||    
T  42656563 acatgttcataaaatgtttgcggcttattttcataagctctccaagatagc 42656513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 47559601 - 47559647
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaa 168  Q
    ||||||||||||||||||||||| ||| ||||| ||||| |||||||    
T  47559601 tgacatgttcataagttgttttcggctcattttcataagttctccaa 47559647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 28165156 - 28165067
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||||| |||||||| |||||||  |||||||||||| |||||| | |||  ||||  |||||||||||  | |||||||| ||||    
T  28165156 tgttcataagctgttttcaacttatttccataagctctccatgatagcttataaagacagtttatagcttatattaaaacaatttgactt 28165067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 33678845 - 33678756
Alignment:
Q  127 tgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||| || |||||||| |||||||| | ||| | ||||||||||| | | | |||||| |||||||| ||||| ||| |||||||||    
T  33678845 tgttcatgagatgttttcaacttattttcacaagttttccaagatagcttatgaaaacagcttatagcttttacaaaaaccatttaactt 33678756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 39539781 - 39539822
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctc 163  Q
    |||||||| |||||| ||||||||||||||||||| ||||||    
T  39539781 tgacatgtccataagctgttttcagcttattttgacaagctc 39539822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 514825 - 514785
Alignment:
Q  134 aagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||| ||||||||||||||||| |||||||||| ||||||    
T  514825 aagttattttcagcttattttgacaagctctccaggatagc 514785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 12792579 - 12792615
Alignment:
Q  138 tgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  12792579 tgttttcagcttattttcataagctcttcaagatagc 12792615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 20553172 - 20553132
Alignment:
Q  123 gacatgttcataagttgttttcagcttattttgataagctc 163  Q
    |||||||||||||||||||||||| ||||||  ||||||||    
T  20553172 gacatgttcataagttgttttcagattatttccataagctc 20553132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 20888397 - 20888425
Alignment:
Q  125 catgttcataagttgttttcagcttattt 153  Q
    |||||||||||||||||||||||||||||    
T  20888397 catgttcataagttgttttcagcttattt 20888425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 29286861 - 29286821
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagct 162  Q
    |||||||||||| |||||||||||||||||||  |||||||    
T  29286861 tgacatgttcatcagttgttttcagcttatttacataagct 29286821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 33894697 - 33894645
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| |||||||||||||||||||||||  |||| || |||| ||||||    
T  33894697 tgacatgtccataagttgttttcagcttatttcaataaactttccaggatagc 33894645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 39281035 - 39280987
Alignment:
Q  126 atgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||| |||||||||||||||||||||||  ||| | |||||||||||||    
T  39281035 atgtccataagttgttttcagcttatttccatatgttctccaagatagc 39280987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 47134757 - 47134797
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagct 162  Q
    ||||| || |||||||||||||||||||||||| |||||||    
T  47134757 tgacacgtccataagttgttttcagcttattttcataagct 47134797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 4420713 - 4420661
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  4420713 tgacatgttcataagctgttttcagcttatttccataagctctccaagatagc 4420661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 6647457 - 6647405
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||| |||||||| |||||||| |||||||||| ||||||||    
T  6647457 tgacatgttcataagatgttttcaacttattttcataagctctctaagatagc 6647405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 3528873 - 3528822
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatag 173  Q
    |||||||| ||||| ||||||||| |||||||| ||||||||||||||||||    
T  3528873 tgacatgtccataacttgttttcatcttattttcataagctctccaagatag 3528822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 7785744 - 7785799
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatg 177  Q
    ||||||||  ||||||||||||||||||||||  ||||||||||||| ||||||||    
T  7785744 tgacatgtctataagttgttttcagcttatttccataagctctccaaaatagcatg 7785799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 31624160 - 31624085
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagctta 197  Q
    ||||||||||||||| |||||||| |||||||| ||||  ||||||||||||| | | | |||||| |||||||||    
T  31624160 tgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatagctta 31624085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 6537017 - 6536975
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctct 164  Q
    ||||||||||||||||||||||||||||||||  |||||||||    
T  6537017 tgacatgttcataagttgttttcagcttatttccataagctct 6536975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 9027648 - 9027606
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctct 164  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  9027648 tgacatgtccataagttgttttcagcttattttcataagctct 9027606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 17241254 - 17241304
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||||||||||||||| |||||||  |||| ||||||||||||||    
T  17241254 acatgttcataagttgttttcaacttatttccataaactctccaagatagc 17241304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 27909638 - 27909683
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctcca 167  Q
    |||||||| |||||||||||||||||||||||  ||||||||||||    
T  27909638 tgacatgtccataagttgttttcagcttatttccataagctctcca 27909683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 10616541 - 10616593
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| | |||||||| ||||||||||||| ||||||||||||| |||||    
T  10616541 tgacatgtccgtaagttgtgttcagcttatttttataagctctccaaaatagc 10616593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 13908533 - 13908481
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||| |||| ||||||||||||||||| ||||||||| || ||||||    
T  13908533 tgacatgttcgtaagctgttttcagcttattttcataagctcttcatgatagc 13908481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 415374 - 415280
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    ||||||||||||||  ||||||||||||  ||  ||||| ||||||  ||||| | ||| |||| | |||||||||||| | |||||||||||||    
T  415374 tgacatgttcataatctgttttcagctttattccataagttctccactatagcttataaaaacaacttatagcttatacgaaaacaatttaactt 415280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 9093572 - 9093650
Alignment:
Q  138 tgttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||||||||||||  |||| |||| |||| ||| | | | |||||| |||||||||||| | |||||||||||||    
T  9093572 tgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaaaacaatttaactt 9093650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 31421008 - 31420975
Alignment:
Q  129 ttcataagttgttttcagcttattttgataagct 162  Q
    |||||||||||||||||||||||||| |||||||    
T  31421008 ttcataagttgttttcagcttattttcataagct 31420975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 821869 - 821837
Alignment:
Q  122 tgacatgttcataagttgttttcagcttatttt 154  Q
    ||||||||||||||| |||||||||||||||||    
T  821869 tgacatgttcataagctgttttcagcttatttt 821837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 835265 - 835301
Alignment:
Q  138 tgttttcagcttattttgataagctctccaagatagc 174  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  835265 tgttttcagcttattttcataagttctccaagatagc 835301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 6654666 - 6654590
Alignment:
Q  141 tttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactta 217  Q
    |||||||||| ||  ||||||||||||||||||||| | | |||||| || || ||| |||| |||||||| |||||    
T  6654666 tttcagcttacttccataagctctccaagatagcatattaaaacagcttaaagtttaaacaaaaacaatttgactta 6654590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 8010509 - 8010457
Alignment:
Q  69 ctgtttggattgacttatgcgagcttatatattggcctaattattcgtgagac 121  Q
    ||||||||||||||||||| |||||||| ||||||| |||  ||| |||||||    
T  8010509 ctgtttggattgacttatgtgagcttatctattggcataaacatttgtgagac 8010457  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 12230413 - 12230353
Alignment:
Q  140 ttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatac 200  Q
    ||||||||||||||| |||||||||||| |||||| | | | |||||  ||||||||||||    
T  12230413 ttttcagcttattttcataagctctccatgatagcttttgataacagattatagcttatac 12230353  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 28641751 - 28641791
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctct 164  Q
    ||||||||||||| |||||| |||||||||| |||||||||    
T  28641751 acatgttcataagctgtttttagcttattttcataagctct 28641791  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 29296295 - 29296335
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagct 162  Q
    |||||||| |||||||| ||||||||||||||| |||||||    
T  29296295 tgacatgtccataagttattttcagcttattttcataagct 29296335  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 30863316 - 30863264
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| |||||||||||||||||||| ||  ||||||||| |||| ||||    
T  30863316 tgacatgtacataagttgttttcagcttacttctataagctcttcaagctagc 30863264  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 32386108 - 32386156
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagata 172  Q
    |||||| |||||||||||||||||||| ||| ||||||| |||| ||||    
T  32386108 acatgtccataagttgttttcagcttactttcataagctttccaggata 32386156  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 32386565 - 32386613
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagata 172  Q
    |||||| || || |||||||||||||||||| |||||||||||| ||||    
T  32386565 acatgtccacaacttgttttcagcttattttcataagctctccaggata 32386613  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 34939814 - 34939762
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| ||||| |||||||||||||||||  |||| ||||||| ||||||    
T  34939814 tgacatgtccataaattgttttcagcttatttccataaactctccaggatagc 34939762  T

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Target: scaffold0147 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 4937 - 4987
Alignment:
Q  124 acatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||||||||||||||||||||||  |  |||||||||||||| ||||    
T  4937 acatgttcataagttgttttcagcttaactccataagctctccaaggtagc 4987  T

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Target: scaffold0147; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 12704 - 12756
Alignment:
Q  122 tgacatgttcataagttgttttcagcttattttgataagctctccaagatagc 174  Q
    |||||||| ||||||||||||||||||||  |  |||||||||| ||||||||    
T  12704 tgacatgtccataagttgttttcagcttagctccataagctctctaagatagc 12756  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 178342 - 178419
Alignment:
Q  139 gttttcagcttattttgataagctctccaagatagcatgtaagaacagcctatagcttatacaagaacaatttaactt 216  Q
    |||||||||||||||| ||||| |||| ||||| || ||| | ||||||  ||||||||||| | || ||||||||||    
T  178342 gttttcagcttattttcataagttctcaaagatggcttgtgaaaacagctaatagcttatacgacaataatttaactt 178419  T

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