View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20618_low_91 (Length: 236)
Name: NF20618_low_91
Description: NF20618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20618_low_91 |
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Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 16027309 - 16027514
Alignment:
| Q |
16 |
ctatgttcctccttcttgatatctcttttaatttaataattgtatataagtatgtccttaagcatccgttataatcgtagttgtcattattgatcttccc |
115 |
Q |
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| T |
16027309 |
ctatgttcctccttccttatatctcttttaatttaataattgtatataagtatgtccttaagcatccgttataaccatagttgtcattattgatcttccc |
16027408 |
T |
|
| Q |
116 |
attgtatattatgatgttcctttttgattgacacttttcataattcctccaaaactttaatttcctttcttattaacatctttagttaattctaaacatt |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
16027409 |
attgtatattatgatgttcctttttgattgacacttttcataattcctccaaaactttaatttcctttcttattaacatttttagttaattctaaacatt |
16027508 |
T |
|
| Q |
216 |
aatttt |
221 |
Q |
| |
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|||||| |
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| T |
16027509 |
aatttt |
16027514 |
T |
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