View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20619_high_26 (Length: 315)

Name: NF20619_high_26
Description: NF20619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20619_high_26
NF20619_high_26
[»] chr2 (45 HSPs)
chr2 (164-265)||(20242667-20242768)
chr2 (165-260)||(28596492-28596587)
chr2 (164-265)||(24009314-24009414)
chr2 (166-263)||(2438661-2438758)
chr2 (163-263)||(18840952-18841052)
chr2 (164-257)||(34993922-34994015)
chr2 (214-262)||(5367213-5367261)
chr2 (164-263)||(30404790-30404889)
chr2 (226-263)||(31808097-31808134)
chr2 (210-265)||(18276539-18276594)
chr2 (218-265)||(20922922-20922969)
chr2 (164-263)||(37558997-37559096)
chr2 (208-263)||(40361738-40361793)
chr2 (203-265)||(37411223-37411285)
chr2 (224-265)||(17776605-17776646)
chr2 (232-265)||(21616780-21616813)
chr2 (218-263)||(34691799-34691844)
chr2 (218-263)||(34714211-34714256)
chr2 (224-265)||(38355887-38355928)
chr2 (225-265)||(15909633-15909673)
chr2 (155-263)||(15972893-15973001)
chr2 (225-265)||(18889592-18889632)
chr2 (225-265)||(32749826-32749866)
chr2 (225-265)||(34784983-34785023)
chr2 (229-265)||(35449531-35449567)
chr2 (163-263)||(38117098-38117198)
chr2 (225-265)||(44860338-44860378)
chr2 (231-262)||(28524447-28524478)
chr2 (164-235)||(35056927-35056998)
chr2 (226-265)||(39279693-39279732)
chr2 (209-263)||(5040754-5040808)
chr2 (203-265)||(21091741-21091803)
chr2 (231-265)||(23718044-23718078)
chr2 (231-265)||(24105716-24105750)
chr2 (164-213)||(10535685-10535734)
chr2 (218-263)||(19536391-19536436)
chr2 (226-255)||(22550254-22550283)
chr2 (234-263)||(28677929-28677958)
chr2 (163-228)||(36096303-36096368)
chr2 (233-265)||(2665897-2665929)
chr2 (164-220)||(18054716-18054772)
chr2 (225-265)||(18570990-18571030)
chr2 (217-265)||(18589214-18589262)
chr2 (225-265)||(27447015-27447055)
chr2 (225-265)||(35056886-35056926)
[»] chr3 (53 HSPs)
chr3 (163-265)||(35222956-35223058)
chr3 (164-307)||(13845465-13845608)
chr3 (164-263)||(40993275-40993374)
chr3 (204-265)||(2941576-2941637)
chr3 (171-259)||(3631708-3631796)
chr3 (164-263)||(55401095-55401194)
chr3 (164-263)||(20503485-20503584)
chr3 (164-265)||(11251996-11252095)
chr3 (165-265)||(8789489-8789591)
chr3 (166-261)||(25775531-25775624)
chr3 (218-265)||(49505148-49505195)
chr3 (203-265)||(25093520-25093582)
chr3 (218-263)||(7928470-7928515)
chr3 (203-263)||(10954972-10955032)
chr3 (164-263)||(18426969-18427068)
chr3 (214-264)||(8842348-8842398)
chr3 (219-265)||(20691337-20691383)
chr3 (203-265)||(45451571-45451633)
chr3 (209-265)||(6780404-6780460)
chr3 (219-263)||(10268481-10268525)
chr3 (225-265)||(11313801-11313841)
chr3 (203-263)||(20389636-20389694)
chr3 (166-265)||(24204983-24205082)
chr3 (203-263)||(24633380-24633440)
chr3 (166-263)||(28918021-28918120)
chr3 (218-265)||(8383275-8383322)
chr3 (164-223)||(41961579-41961638)
chr3 (209-259)||(3865698-3865748)
chr3 (231-265)||(10690269-10690303)
chr3 (235-265)||(11493372-11493402)
chr3 (234-264)||(11507485-11507515)
chr3 (219-265)||(13414487-13414533)
chr3 (225-263)||(14209133-14209171)
chr3 (165-235)||(14216951-14217021)
chr3 (165-235)||(14223080-14223150)
chr3 (163-229)||(17005547-17005613)
chr3 (163-229)||(25064972-25065038)
chr3 (225-255)||(26917298-26917328)
chr3 (231-265)||(32804547-32804581)
chr3 (225-263)||(38731238-38731276)
chr3 (225-263)||(39002052-39002090)
chr3 (219-265)||(48202264-48202310)
chr3 (232-265)||(2731830-2731863)
chr3 (204-265)||(7614396-7614456)
chr3 (232-265)||(16192758-16192791)
chr3 (203-263)||(7171521-7171581)
chr3 (225-265)||(8039836-8039876)
chr3 (225-265)||(14028025-14028065)
chr3 (237-265)||(14840304-14840332)
chr3 (203-231)||(16192701-16192729)
chr3 (225-265)||(26290389-26290429)
chr3 (203-263)||(26492184-26492244)
chr3 (231-263)||(29508464-29508496)
[»] chr4 (50 HSPs)
chr4 (164-265)||(35161054-35161155)
chr4 (162-263)||(23292924-23293025)
chr4 (163-263)||(35157924-35158024)
chr4 (203-265)||(8402721-8402783)
chr4 (163-263)||(40179575-40179675)
chr4 (162-265)||(8423656-8423759)
chr4 (164-263)||(49431046-49431145)
chr4 (209-263)||(54580008-54580062)
chr4 (163-235)||(5414100-5414172)
chr4 (163-263)||(28964187-28964287)
chr4 (164-265)||(36635342-36635449)
chr4 (165-263)||(3947702-3947805)
chr4 (182-265)||(9996858-9996941)
chr4 (214-265)||(10499260-10499311)
chr4 (164-263)||(12895214-12895313)
chr4 (164-235)||(22234819-22234890)
chr4 (164-263)||(36509032-36509131)
chr4 (203-263)||(12797317-12797377)
chr4 (189-265)||(19097859-19097935)
chr4 (165-253)||(12323944-12324038)
chr4 (164-263)||(16073414-16073513)
chr4 (196-263)||(38846984-38847051)
chr4 (164-234)||(24613630-24613700)
chr4 (163-265)||(30103296-30103397)
chr4 (231-265)||(40613468-40613502)
chr4 (228-265)||(903940-903977)
chr4 (224-265)||(5775358-5775399)
chr4 (203-263)||(2361954-2362014)
chr4 (217-253)||(20950420-20950456)
chr4 (233-265)||(22440609-22440641)
chr4 (203-263)||(29205464-29205524)
chr4 (164-263)||(34306744-34306843)
chr4 (164-223)||(19482739-19482798)
chr4 (231-265)||(13134468-13134502)
chr4 (231-265)||(16189727-16189761)
chr4 (177-263)||(21945523-21945609)
chr4 (164-263)||(23861369-23861470)
chr4 (219-265)||(33950154-33950200)
chr4 (161-235)||(46083917-46083991)
chr4 (232-265)||(18576045-18576078)
chr4 (225-258)||(35723385-35723418)
chr4 (218-263)||(42640549-42640594)
chr4 (203-263)||(4157169-4157229)
chr4 (203-263)||(4157456-4157516)
chr4 (225-265)||(6933293-6933333)
chr4 (232-260)||(15029788-15029816)
chr4 (231-263)||(22234897-22234929)
chr4 (225-265)||(30982879-30982919)
chr4 (225-265)||(44132645-44132685)
chr4 (225-265)||(46160914-46160954)
[»] chr1 (63 HSPs)
chr1 (165-261)||(12918967-12919063)
chr1 (165-293)||(40258874-40259002)
chr1 (166-264)||(29163323-29163421)
chr1 (164-265)||(30749858-30749959)
chr1 (164-265)||(30771309-30771410)
chr1 (165-265)||(10577676-10577776)
chr1 (164-263)||(5898206-5898305)
chr1 (164-263)||(18337349-18337448)
chr1 (164-263)||(37598852-37598950)
chr1 (164-265)||(7918154-7918252)
chr1 (225-265)||(25361904-25361944)
chr1 (201-265)||(36878479-36878543)
chr1 (209-265)||(40181889-40181945)
chr1 (164-263)||(51410045-51410144)
chr1 (164-263)||(38078601-38078700)
chr1 (157-263)||(18190041-18190147)
chr1 (164-265)||(2896061-2896162)
chr1 (163-263)||(22515826-22515926)
chr1 (163-263)||(46348322-46348422)
chr1 (203-263)||(1815277-1815337)
chr1 (164-236)||(32461393-32461465)
chr1 (225-265)||(34371731-34371771)
chr1 (225-265)||(44482248-44482288)
chr1 (226-265)||(1864882-1864921)
chr1 (226-265)||(10233271-10233310)
chr1 (213-264)||(17705576-17705626)
chr1 (164-235)||(25934675-25934746)
chr1 (166-263)||(1486646-1486748)
chr1 (219-265)||(2784574-2784620)
chr1 (209-263)||(13997903-13997957)
chr1 (219-265)||(23636044-23636090)
chr1 (203-265)||(43492473-43492535)
chr1 (216-265)||(14332634-14332683)
chr1 (232-265)||(25098563-25098596)
chr1 (166-263)||(42359391-42359488)
chr1 (218-263)||(52903269-52903314)
chr1 (218-262)||(13436479-13436523)
chr1 (233-265)||(19324580-19324612)
chr1 (225-265)||(20157351-20157391)
chr1 (209-265)||(28674818-28674874)
chr1 (225-265)||(34712384-34712424)
chr1 (218-265)||(9709838-9709885)
chr1 (164-235)||(9828103-9828174)
chr1 (225-263)||(5944303-5944341)
chr1 (225-263)||(9828064-9828102)
chr1 (163-229)||(18556384-18556450)
chr1 (164-253)||(27965940-27966027)
chr1 (225-263)||(35919277-35919315)
chr1 (211-265)||(39130754-39130808)
chr1 (219-265)||(39953141-39953187)
chr1 (232-265)||(6427368-6427401)
chr1 (226-263)||(17754331-17754368)
chr1 (214-263)||(22881606-22881655)
chr1 (210-263)||(26830608-26830660)
chr1 (232-265)||(36906015-36906048)
chr1 (231-263)||(398772-398804)
chr1 (233-265)||(12443469-12443501)
chr1 (225-265)||(21038101-21038141)
chr1 (225-265)||(25272500-25272540)
chr1 (237-265)||(34298454-34298482)
chr1 (225-265)||(38503338-38503378)
chr1 (164-236)||(41597410-41597482)
chr1 (163-235)||(47989556-47989628)
[»] chr8 (43 HSPs)
chr8 (166-265)||(3025569-3025668)
chr8 (164-263)||(3951476-3951575)
chr8 (165-264)||(43737752-43737851)
chr8 (164-265)||(14134717-14134818)
chr8 (166-265)||(20679337-20679436)
chr8 (164-265)||(26902104-26902216)
chr8 (203-265)||(33405363-33405425)
chr8 (161-235)||(34450958-34451032)
chr8 (210-265)||(4786324-4786379)
chr8 (164-263)||(36450694-36450793)
chr8 (186-263)||(31557016-31557093)
chr8 (209-261)||(9414860-9414912)
chr8 (209-265)||(40332209-40332265)
chr8 (166-265)||(926730-926829)
chr8 (177-260)||(8293848-8293931)
chr8 (164-263)||(18407739-18407838)
chr8 (225-263)||(11927087-11927125)
chr8 (219-265)||(13844591-13844637)
chr8 (231-265)||(34897103-34897137)
chr8 (208-265)||(37283796-37283851)
chr8 (209-246)||(126332-126369)
chr8 (225-262)||(8847277-8847314)
chr8 (232-265)||(11803277-11803310)
chr8 (220-265)||(12606825-12606870)
chr8 (164-257)||(24413499-24413592)
chr8 (225-261)||(24362203-24362239)
chr8 (217-265)||(31236570-31236618)
chr8 (226-265)||(18964195-18964234)
chr8 (217-263)||(4948672-4948718)
chr8 (225-263)||(11944685-11944723)
chr8 (209-263)||(20873089-20873143)
chr8 (231-265)||(27213565-27213599)
chr8 (224-262)||(28384994-28385032)
chr8 (203-265)||(38079017-38079079)
chr8 (164-265)||(39820447-39820547)
chr8 (232-265)||(14731730-14731763)
chr8 (218-255)||(22204669-22204706)
chr8 (165-234)||(29447040-29447109)
chr8 (168-265)||(31580071-31580168)
chr8 (224-265)||(33382019-33382060)
chr8 (169-265)||(31109463-31109559)
chr8 (231-263)||(34222967-34222999)
chr8 (233-265)||(39954288-39954320)
[»] chr6 (55 HSPs)
chr6 (164-263)||(34595154-34595253)
chr6 (165-265)||(9658897-9658998)
chr6 (163-263)||(28152118-28152218)
chr6 (164-265)||(17327590-17327696)
chr6 (203-263)||(33001268-33001328)
chr6 (214-265)||(19040370-19040421)
chr6 (164-263)||(28715315-28715414)
chr6 (164-265)||(7377997-7378098)
chr6 (164-265)||(4388103-4388199)
chr6 (212-264)||(7740660-7740712)
chr6 (59-99)||(11968709-11968749)
chr6 (166-265)||(7265535-7265634)
chr6 (163-265)||(13360312-13360413)
chr6 (164-263)||(13789174-13789273)
chr6 (164-263)||(13797793-13797892)
chr6 (164-235)||(18367895-18367966)
chr6 (150-265)||(32511592-32511707)
chr6 (225-265)||(9025495-9025535)
chr6 (163-235)||(16488518-16488590)
chr6 (203-263)||(24645501-24645561)
chr6 (164-259)||(4877967-4878061)
chr6 (181-263)||(12627534-12627616)
chr6 (164-263)||(16833328-16833427)
chr6 (165-263)||(17841530-17841628)
chr6 (207-265)||(30851620-30851676)
chr6 (225-263)||(7027262-7027300)
chr6 (231-265)||(11591877-11591911)
chr6 (166-263)||(12696344-12696446)
chr6 (203-265)||(13364684-13364746)
chr6 (231-265)||(26562707-26562741)
chr6 (134-167)||(11968749-11968782)
chr6 (210-263)||(29020932-29020985)
chr6 (209-265)||(31579212-31579266)
chr6 (225-265)||(9617452-9617492)
chr6 (225-265)||(9629401-9629441)
chr6 (218-265)||(5732504-5732551)
chr6 (226-265)||(7086813-7086852)
chr6 (224-263)||(8101105-8101144)
chr6 (227-265)||(10339128-10339167)
chr6 (164-262)||(6898221-6898319)
chr6 (225-255)||(9750450-9750480)
chr6 (229-263)||(17341669-17341703)
chr6 (219-265)||(21924930-21924976)
chr6 (231-265)||(30866151-30866185)
chr6 (225-263)||(31384940-31384978)
chr6 (166-260)||(32298549-32298643)
chr6 (167-265)||(7996325-7996419)
chr6 (167-265)||(8022382-8022476)
chr6 (224-265)||(19044482-19044523)
chr6 (219-263)||(1700372-1700416)
chr6 (164-263)||(7977770-7977869)
chr6 (225-265)||(9024177-9024217)
chr6 (225-261)||(9027200-9027236)
chr6 (225-265)||(9195755-9195795)
chr6 (225-265)||(34073348-34073388)
[»] chr5 (44 HSPs)
chr5 (163-261)||(30098977-30099075)
chr5 (164-263)||(21576685-21576784)
chr5 (164-265)||(42029770-42029871)
chr5 (164-263)||(43564901-43565000)
chr5 (164-265)||(28588614-28588715)
chr5 (177-265)||(26312787-26312875)
chr5 (166-265)||(30502330-30502429)
chr5 (166-265)||(30542673-30542772)
chr5 (166-263)||(21190998-21191095)
chr5 (210-265)||(12927672-12927727)
chr5 (164-263)||(42893380-42893479)
chr5 (165-235)||(6401557-6401627)
chr5 (164-265)||(27932253-27932354)
chr5 (204-265)||(32630715-32630776)
chr5 (209-265)||(18421826-18421882)
chr5 (163-235)||(21814320-21814392)
chr5 (203-265)||(23012387-23012449)
chr5 (163-233)||(30098387-30098457)
chr5 (231-265)||(39758290-39758324)
chr5 (231-265)||(41091264-41091298)
chr5 (232-265)||(6471897-6471930)
chr5 (209-265)||(6770561-6770615)
chr5 (214-263)||(15884008-15884057)
chr5 (225-265)||(3966521-3966561)
chr5 (233-265)||(24273039-24273071)
chr5 (233-265)||(24389143-24389175)
chr5 (214-265)||(16203785-16203836)
chr5 (214-265)||(21194195-21194246)
chr5 (213-263)||(6247642-6247692)
chr5 (164-265)||(14873535-14873641)
chr5 (163-265)||(17123066-17123167)
chr5 (231-265)||(23015996-23016030)
chr5 (225-263)||(39698561-39698599)
chr5 (224-265)||(12264829-12264870)
chr5 (164-265)||(21194063-21194164)
chr5 (223-264)||(23287348-23287389)
chr5 (168-260)||(4105282-4105374)
chr5 (231-263)||(5467985-5468017)
chr5 (166-265)||(7997108-7997207)
chr5 (225-265)||(17925173-17925213)
chr5 (225-265)||(32426870-32426910)
chr5 (225-265)||(36838561-36838601)
chr5 (225-265)||(41558655-41558695)
chr5 (215-255)||(42126311-42126351)
[»] chr7 (42 HSPs)
chr7 (164-265)||(18212973-18213074)
chr7 (164-265)||(21880170-21880271)
chr7 (164-265)||(598226-598327)
chr7 (163-265)||(5835265-5835367)
chr7 (165-262)||(18035806-18035902)
chr7 (165-265)||(32287404-32287504)
chr7 (186-265)||(39138462-39138541)
chr7 (184-265)||(27093373-27093454)
chr7 (184-265)||(27184847-27184928)
chr7 (214-262)||(640134-640182)
chr7 (203-263)||(15680829-15680889)
chr7 (214-265)||(22868060-22868111)
chr7 (204-265)||(20549809-20549870)
chr7 (165-265)||(22484043-22484143)
chr7 (225-265)||(5548694-5548734)
chr7 (225-265)||(22602711-22602751)
chr7 (209-265)||(23191914-23191969)
chr7 (183-263)||(26733324-26733404)
chr7 (225-265)||(32308138-32308178)
chr7 (214-265)||(9482952-9483003)
chr7 (226-265)||(17851449-17851488)
chr7 (164-263)||(42720830-42720929)
chr7 (225-263)||(18013075-18013113)
chr7 (163-263)||(32093953-32094059)
chr7 (164-263)||(5409771-5409875)
chr7 (164-259)||(33994236-33994331)
chr7 (215-265)||(2424632-2424685)
chr7 (218-265)||(3721111-3721158)
chr7 (203-265)||(12278853-12278915)
chr7 (215-265)||(1401043-1401093)
chr7 (219-265)||(4909169-4909215)
chr7 (231-265)||(27732246-27732280)
chr7 (226-263)||(15902842-15902879)
chr7 (232-265)||(17307911-17307944)
chr7 (220-265)||(24146834-24146879)
chr7 (164-229)||(43027404-43027469)
chr7 (225-265)||(7328692-7328732)
chr7 (233-265)||(16341514-16341546)
chr7 (225-265)||(19206068-19206108)
chr7 (225-265)||(19992019-19992059)
chr7 (203-263)||(21864828-21864888)
chr7 (219-263)||(38143243-38143287)
[»] scaffold0050 (1 HSPs)
scaffold0050 (167-263)||(70298-70394)
[»] scaffold0652 (1 HSPs)
scaffold0652 (165-263)||(403-501)
[»] scaffold0022 (1 HSPs)
scaffold0022 (163-265)||(90861-90963)
[»] scaffold0083 (1 HSPs)
scaffold0083 (203-257)||(45509-45563)
[»] scaffold0171 (2 HSPs)
scaffold0171 (225-263)||(23531-23569)
scaffold0171 (225-263)||(23440-23478)
[»] scaffold0123 (1 HSPs)
scaffold0123 (231-265)||(44532-44566)
[»] scaffold0003 (2 HSPs)
scaffold0003 (164-229)||(241659-241724)
scaffold0003 (219-263)||(348122-348166)
[»] scaffold0279 (1 HSPs)
scaffold0279 (209-265)||(17788-17844)
[»] scaffold0036 (1 HSPs)
scaffold0036 (225-265)||(9748-9788)
[»] scaffold0020 (1 HSPs)
scaffold0020 (225-265)||(135313-135353)
[»] scaffold0008 (1 HSPs)
scaffold0008 (225-265)||(263373-263413)
[»] scaffold0361 (1 HSPs)
scaffold0361 (203-263)||(14550-14607)
[»] scaffold0306 (1 HSPs)
scaffold0306 (166-265)||(13418-13523)
[»] scaffold0223 (1 HSPs)
scaffold0223 (225-263)||(20192-20230)
[»] scaffold0152 (1 HSPs)
scaffold0152 (166-265)||(21804-21909)
[»] scaffold0136 (1 HSPs)
scaffold0136 (225-263)||(3850-3888)
[»] scaffold0044 (1 HSPs)
scaffold0044 (231-265)||(53198-53232)
[»] scaffold1528 (1 HSPs)
scaffold1528 (226-263)||(1055-1092)
[»] scaffold0475 (1 HSPs)
scaffold0475 (164-253)||(3338-3427)
[»] scaffold0623 (1 HSPs)
scaffold0623 (225-265)||(5997-6037)
[»] scaffold0236 (1 HSPs)
scaffold0236 (225-265)||(25769-25809)
[»] scaffold0053 (1 HSPs)
scaffold0053 (203-263)||(8818-8878)


Alignment Details
Target: chr2 (Bit Score: 66; Significance: 4e-29; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 164 - 265
Target Start/End: Original strand, 20242667 - 20242768
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||  |||||  |||||||||| |||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  20242667 ctatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgatttt 20242766  T
Q  264 ct 265  Q
    ||    
T  20242767 ct 20242768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 28596587 - 28596492
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgat 260  Q
    ||||||||||| ||||| ||||||| |||||||| |  ||||| ||||||||||||||| ||||| ||||| |||||||||||||| |||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgacttatgtgat 28596492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 24009414 - 24009314
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| ||||| || |||||||| |||| | |||||||||||||||||||||| ||||| |||||||| | |||||||| ||| |||||||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacata-atttacactgcattttgtgatttt 24009316  T
Q  264 ct 265  Q
    ||    
T  24009315 ct 24009314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 2438661 - 2438758
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||| ||||| ||||||| ||| |||| |  ||||| |||| |||||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 2438758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 18840952 - 18841052
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    ||||||||||||| ||||| ||||||| ||| |||| |  ||||| |||| |||||||||||||||| ||||| | |||||||||| |||||||| ||||    
T  18840952 actatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattt 18841051  T
Q  263 t 263  Q
    |    
T  18841052 t 18841052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 34993922 - 34994015
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgt 257  Q
    |||||||||||||||||| || | || ||| |||| |  ||||| ||||| ||||||||  |||||||||||||||||||||| ||||||||||    
T  34993922 ctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattacattgaattatgt 34994015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 5367261 - 5367213
Alignment:
Q  214 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  5367261 gtgtcgtgtccgacaccgacacatataattacactgaattatgtgattt 5367213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 30404790 - 30404889
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||| ||| |||||| ||| |||  ||| || ||||| |||| |||||||||| ||| | ||||| | |||||||||||||||||||||||||    
T  30404790 ctatgaagcacaaacgcttctcagattaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgatttt 30404889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 31808134 - 31808097
Alignment:
Q  226 acactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31808134 acactgacacatataattacactgaattatgtgatttt 31808097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 18276594 - 18276539
Alignment:
Q  210 acacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||| || |||||||| |||||| ||||||||||||||||| ||||||||||    
T  18276594 acacgtgtggtatctgacaccgacacacataattacactgaattaagtgattttct 18276539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 20922922 - 20922969
Alignment:
Q  218 cgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  20922922 cgtgtccgacacagacacatataattacactaaattatgtgattttct 20922969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 37559096 - 37558997
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| ||||| ||||||| | | |||| |  ||||| ||||||||||  ||| ||||| ||||| | |||||||| ||||||||||||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttt 37558997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 40361738 - 40361793
Alignment:
Q  208 agacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||||||||||||||  ||| ||||||||||||| |||||||| |||||    
T  40361738 agacacgtgtcgtgtctgacaccaacagatataattacactaaattatgtaatttt 40361793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 37411223 - 37411285
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||| |||||||  ||||  |||||||||||| ||||||||||||||||||||||    
T  37411223 gtgtcggacacgcgtcgtgttcgacatcgacacatataatcacactgaattatgtgattttct 37411285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 17776646 - 17776605
Alignment:
Q  224 tgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  17776646 tgacactgacacatataattacactgacttatgtggttttct 17776605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 265
Target Start/End: Complemental strand, 21616813 - 21616780
Alignment:
Q  232 acacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||||||||||||||||||||||    
T  21616813 acacatataattacactgaattatgtgattttct 21616780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 34691799 - 34691844
Alignment:
Q  218 cgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||||    
T  34691799 cgtgtccgacaccgacacatataattacactgaattatatgatttt 34691844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 34714211 - 34714256
Alignment:
Q  218 cgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||||    
T  34714211 cgtgtccgacaccgacacatataattacactgaattatatgatttt 34714256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 38355887 - 38355928
Alignment:
Q  224 tgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  38355887 tgacaccgacacatataatcacactgaattatgtgattttct 38355928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 15909633 - 15909673
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  15909633 gacactgtcacatataattacactgaattatgtaattttct 15909673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 15973001 - 15972893
Alignment:
Q  155 agttggacactatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaatta 254  Q
    ||||| || |||||||||||| ||| |  |||||| ||| |||| |  | ||| ||||||||||||||| ||||| ||||| | |||||||||||||||     
T  15973001 agttgcaccctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattg 15972902  T
Q  255 tgtgatttt 263  Q
    ||| |||||    
T  15972901 tgtaatttt 15972893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 18889592 - 18889632
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttct 18889632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 32749826 - 32749866
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  32749826 gacactgacacttattattacactgaattatgtgattttct 32749866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 34784983 - 34785023
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  34784983 gacaccgacacatataattacactaaattatgtgattttct 34785023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 35449567 - 35449531
Alignment:
Q  229 ctgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||||||||||||| |||||||||||    
T  35449567 ctgacacatataattacactgaattctgtgattttct 35449531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 38117098 - 38117198
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    ||||||||||||| ||||  ||||||| ||| |||| |  ||||| ||||||||| ||||| |||||  |||| | ||||||||| ||| ||||||||||    
T  38117098 actatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattt 38117197  T
Q  263 t 263  Q
    |    
T  38117198 t 38117198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 44860378 - 44860338
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  44860378 gacaccgacacatataattacactgaattatgcgattttct 44860338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 262
Target Start/End: Complemental strand, 28524478 - 28524447
Alignment:
Q  231 gacacatataattacactgaattatgtgattt 262  Q
    ||||||||||||||||||||||||||||||||    
T  28524478 gacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 35056998 - 35056927
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 235  Q
    |||||||||||| ||||| ||| ||| ||| |||||  |||||| ||||||||||||||| ||||| |||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 265
Target Start/End: Complemental strand, 39279732 - 39279693
Alignment:
Q  226 acactgacacatataattacactgaattatgtgattttct 265  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttct 39279693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 5040808 - 5040754
Alignment:
Q  209 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| ||||||||| ||||| ||||| | |||||||| ||||||||||||||||    
T  5040808 gacacatgtcgtgtccgacaccgacacttgtaattacattgaattatgtgatttt 5040754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 265
Target Start/End: Complemental strand, 21091803 - 21091741
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||| ||| | |||||||||||||||| | ||||||||||||| ||||| |||||||    
T  21091803 gtgtccgacaggtggcttgtctgacactgacacttgtaattacactgaagtatgttattttct 21091741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 23718078 - 23718044
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||||||||||||||||| |||||    
T  23718078 gacacatataattacactgaattatgtgactttct 23718044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 24105750 - 24105716
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||||||||||||||||| |||||    
T  24105750 gacacatataattacactgaattatgtgactttct 24105716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 10535685 - 10535734
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacac 213  Q
    |||||||||||||||||| ||||||| ||| |||| || |||||||||||    
T  10535685 ctatgaagcacgaacactcctcggattaggcgtgtcctggtgtcagacac 10535734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 19536391 - 19536436
Alignment:
Q  218 cgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||| ||||| ||||| | |||||||||||||||||||||||||    
T  19536391 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 19536436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 255
Target Start/End: Original strand, 22550254 - 22550283
Alignment:
Q  226 acactgacacatataattacactgaattat 255  Q
    ||||||||||||||||||||||||||||||    
T  22550254 acactgacacatataattacactgaattat 22550283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 263
Target Start/End: Complemental strand, 28677958 - 28677929
Alignment:
Q  234 acatataattacactgaattatgtgatttt 263  Q
    ||||||||||||||||||||||||||||||    
T  28677958 acatataattacactgaattatgtgatttt 28677929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 36096303 - 36096368
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgaca 228  Q
    ||||||||||||| |||||  | || ||||| |||| | |||||||||||||||||||||| ||||    
T  36096303 actatgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 36096368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 2665897 - 2665929
Alignment:
Q  233 cacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||| ||||||||||||||||    
T  2665897 cacatataattacactaaattatgtgattttct 2665929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 18054716 - 18054772
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgt 220  Q
    |||||||||||| ||| | || |||||||| |||||  |||||||||||||||||||    
T  18054716 ctatgaagcacggacattccttggataaggcgtgtttccgtgtcagacacgtgtcgt 18054772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 18571030 - 18570990
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||| |||||| |||||||||| |||||||    
T  18571030 gacactgacacatatgattacattgaattatgtcattttct 18570990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 18589262 - 18589214
Alignment:
Q  217 tcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||| |||||||||||||||| ||| |||||||| ||| |||||||    
T  18589262 tcgtgtccgacactgacacatatagttagactgaattgtgtaattttct 18589214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 27447015 - 27447055
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||| ||||||||||||||||||| ||| ||||    
T  27447015 gacactgacacaaataattacactgaattatgggatcttct 27447055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 35056926 - 35056886
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||||||||||||||||||||||| || ||||||    
T  35056926 gacaccgacacatataattacactgaattatatggttttct 35056886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 265
Target Start/End: Complemental strand, 35223058 - 35222956
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    ||||||||||||| ||||| ||||||||| | |||| | ||||||||||||||||| |||| ||||| |||||||||||||||| |||||||||||||||    
T  35223058 actatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatgtgattt 35222959  T
Q  263 tct 265  Q
    |||    
T  35222958 tct 35222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 164 - 307
Target Start/End: Original strand, 13845465 - 13845608
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| ||||| || |||||||| ||||   |||||||||||||| ||||||| ||||| ||||||||||||||||||| ||| |||||||||    
T  13845465 ctatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataattacactgcattttgtgatttt 13845564  T
Q  264 ctnnnnnnnttaattgtgtcgatgtccgtgtctgtatctgtgct 307  Q
    ||       |||| ||||||| |||||||||| ||||| |||||    
T  13845565 ctaaaaaatttaactgtgtcggtgtccgtgtccgtatccgtgct 13845608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 40993275 - 40993374
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||| | ||||| ||||||| ||| |||| |  ||||| |||| |||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 2941637 - 2941576
Alignment:
Q  204 tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||    
T  2941637 tgtcagacacgtgtcgtgtccgacaccgacacatataattacactgtattttgtgattttct 2941576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 3631796 - 3631708
Alignment:
Q  171 gcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtga 259  Q
    ||||| ||||| ||||||  ||| |||| || ||||| |||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacactggcacatataattacactgaattatgtga 3631708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 55401194 - 55401095
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcg-tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    |||||||||||| ||||| ||||||| ||| |||| |||| |||| ||||||||||||||| ||||| ||||| | |||||||||| |||||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgt-ctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattt 55401096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 20503584 - 20503485
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| ||||| ||||||| ||| |||| |  |||||||||| ||||||||||  |||| ||||| | ||||||||||||||||||| |||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcatttt 20503485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 11252095 - 11251996
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||  ||||| ||||||| ||| ||||||   || | ||||||||| ||||||||||| ||||||||  |||||||||||||||||||||||    
T  11252095 ctatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacacata--attacactgaattatgtgatttt 11251998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 265
Target Start/End: Original strand, 8789489 - 8789591
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctc-gtgtcagaca--cgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 261  Q
    ||||||||||| ||||| ||||||| ||| ||| |||| ||||| ||||   |||||||||| ||||| ||||||||||||||||| |||||||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtg-tctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgatt 8789587  T
Q  262 ttct 265  Q
    ||||    
T  8789588 ttct 8789591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 261
Target Start/End: Complemental strand, 25775624 - 25775531
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 261  Q
    |||||||||||||||| ||||||| ||| |||| || ||||| ||||||   |||||| ||||| ||||| | |||||||||||||||||||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacacga--cgtgtccgacaccgacacttgtaattacactgaattatgtgatt 25775531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 49505148 - 49505195
Alignment:
Q  218 cgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  49505148 cgtgtccgacactgacacatataattacactaaattatgtgattttct 49505195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 265
Target Start/End: Complemental strand, 25093582 - 25093520
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||| |||| ||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  25093582 gtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttct 25093520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 7928515 - 7928470
Alignment:
Q  218 cgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||    
T  7928515 cgtgtccgacaccgacacatataattacactgaattatgtgatttt 7928470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 10955032 - 10954972
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| ||||||||||||||| ||||| ||||| | | |||||||||||||||||||||||    
T  10955032 gtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgatttt 10954972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 18427068 - 18426969
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||| |||| ||||| ||| ||| ||| |||| |  ||| | |||||||||||| || ||||| |||| |||||||||||| |||||||||||||||    
T  18427068 ctatgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacatatataattacaccgaattatgtgatttt 18426969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 8842398 - 8842348
Alignment:
Q  214 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattttc 264  Q
    |||||||||||||||| |||| ||||||||||||  |||||||||||||||    
T  8842398 gtgtcgtgtctgacaccgacatatataattacaccaaattatgtgattttc 8842348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 20691383 - 20691337
Alignment:
Q  219 gtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||||    
T  20691383 gtgtctgacaccgacacatatgattacactgaattatgtcattttct 20691337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 265
Target Start/End: Complemental strand, 45451633 - 45451571
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||| |||||||||| ||||| ||||||||| |||| |||||| |||||||||||||    
T  45451633 gtgtcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttct 45451571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 6780404 - 6780460
Alignment:
Q  209 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||| ||||| |||||  |||||||||||||||||||| || ||||||||||    
T  6780404 gacacgtgttgtgtccgacaccaacacatataattacactgaactacgtgattttct 6780460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 10268481 - 10268525
Alignment:
Q  219 gtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||    
T  10268481 gtgtctgacactgacacttgtaattacactaaattatgtgatttt 10268525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 11313801 - 11313841
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  11313801 gacactaacacatataattacactaaattatgtgattttct 11313841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 20389694 - 20389636
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||||||| ||||| ||||| ||| |||||| ||||||||||||||||||||||    
T  20389694 gtgtcagacacgtgt-gtgtccgacaccgacgcatata-ttacactgaattatgtgatttt 20389636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 265
Target Start/End: Original strand, 24204983 - 24205082
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtc-gtgtctgacactgacacatataattacactgaattatgtgattttc 264  Q
    |||||||||| ||||| |||| || ||| |||| || ||||| |||||| ||| ||||| ||||| ||||| ||||||||||||| ||||||| ||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacac-gacacttataattacactgtattatgtcattttc 24205081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 24633380 - 24633440
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||| ||||| ||||||||||  |||| |||||||||||||||| ||||||| ||||||||    
T  24633380 gtgttagacaagtgtcgtgtccaacaccgacacatataattacattgaattacgtgatttt 24633440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 263
Target Start/End: Complemental strand, 28918120 - 28918021
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtct--gacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||| | ||||| || |||| ||| |||| |  ||||| |||||||||||||||   ||||| ||||| | |||||||||||||||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgatttt 28918021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 8383322 - 8383275
Alignment:
Q  218 cgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||| ||||| ||||| ||||||||||||||||||| |||||||||    
T  8383322 cgtgtccgacaccgacacttataattacactgaattatatgattttct 8383275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 41961579 - 41961638
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtc 223  Q
    |||||||||||| ||||||||||||| ||| |||| |  ||||| |||||||||||||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtc 41961638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 3865748 - 3865698
Alignment:
Q  209 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtga 259  Q
    ||||||||||||||| ||||| ||||| | |||||| ||||||||||||||    
T  3865748 gacacgtgtcgtgtcagacaccgacacttgtaattatactgaattatgtga 3865698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 10690269 - 10690303
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    |||| ||||||||||||||||||||||||||||||    
T  10690269 gacaaatataattacactgaattatgtgattttct 10690303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Original strand, 11493372 - 11493402
Alignment:
Q  235 catataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||||||||    
T  11493372 catataattacactgaattatgtgattttct 11493402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 264
Target Start/End: Original strand, 11507485 - 11507515
Alignment:
Q  234 acatataattacactgaattatgtgattttc 264  Q
    |||||||||||||||||||||||||||||||    
T  11507485 acatataattacactgaattatgtgattttc 11507515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 13414533 - 13414487
Alignment:
Q  219 gtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||| |||||||||||||||| |||||||| |||||||||    
T  13414533 gtgtccgacaccgacacatataattacattgaattatttgattttct 13414487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 14209171 - 14209133
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  14209171 gacactgacacttgtaattacactgaattatgtgatttt 14209133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 14217021 - 14216951
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 235  Q
    ||||||||||| ||||||||||||| ||| |||| |  |||||  |||||||||||||| |||||| ||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacac 14216951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 14223150 - 14223080
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 235  Q
    ||||||||||| ||||||||||||| ||| |||| |  |||||  |||||||||||||| |||||| ||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacac 14223080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 17005547 - 17005613
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacac 229  Q
    |||||||||||| |||||| ||||||| ||  |||| || |||||||||||||||  ||||||||||    
T  17005547 actatgaagcacaaacactcctcggattagaggtgtcctggtgtcagacacgtgttatgtctgacac 17005613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 25065038 - 25064972
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacac 229  Q
    |||||| |||||||||||| |||||||||   |||| |  ||||||||||||||||||||| |||||    
T  25065038 actatggagcacgaacactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacac 25064972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 255
Target Start/End: Complemental strand, 26917328 - 26917298
Alignment:
Q  225 gacactgacacatataattacactgaattat 255  Q
    |||||||||||||||||||||||||||||||    
T  26917328 gacactgacacatataattacactgaattat 26917298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 32804547 - 32804581
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||| ||||||||||||||||    
T  32804547 gacacatataattacactaaattatgtgattttct 32804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 38731276 - 38731238
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  38731276 gacaccgacacatataactacactgaattatgtgatttt 38731238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 39002090 - 39002052
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  39002090 gacactgacatatataattacattgaattatgtgatttt 39002052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 48202264 - 48202310
Alignment:
Q  219 gtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||| |||||| |||||||||||||||| | ||||||||||||||||    
T  48202264 gtgtttgacacagacacatataattacattaaattatgtgattttct 48202310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Complemental strand, 2731863 - 2731830
Alignment:
Q  232 acacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||||| ||||||||||||||||    
T  2731863 acacatataattacacttaattatgtgattttct 2731830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 7614396 - 7614456
Alignment:
Q  204 tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||| |||| |||||  ||||| |||| ||||||||| ||||||||||||||||||||    
T  7614396 tgtcagac-cgtgccgtgttcgacaccgacatatataattatactgaattatgtgattttct 7614456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 16192758 - 16192791
Alignment:
Q  232 acacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||| |||||||    
T  16192758 acacatataattacactgaattatgttattttct 16192791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 7171581 - 7171521
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| ||||||||||||||| |||||  |||| | ||||||||| ||||||| |||||||    
T  7171581 gtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatgatttt 7171521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 8039836 - 8039876
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||||||||||||||||||||||| | |||||||    
T  8039836 gacaccgacacatataattacactgaattatataattttct 8039876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 14028065 - 14028025
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||||||||||||||||| ||| |||||||||||    
T  14028065 gacaccgacacatataattacactgcattttgtgattttct 14028025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 265
Target Start/End: Original strand, 14840304 - 14840332
Alignment:
Q  237 tataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||||||    
T  14840304 tataattacactgaattatgtgattttct 14840332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 231
Target Start/End: Original strand, 16192701 - 16192729
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactg 231  Q
    |||||||||||||||||||||||||||||    
T  16192701 gtgtcagacacgtgtcgtgtctgacactg 16192729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 26290429 - 26290389
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  26290429 gacactgacacatataattaaaccgaactatgtgattttct 26290389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 26492184 - 26492244
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||| |||||||||| ||||| || || | ||||||||||||||| | |||||||    
T  26492184 gtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgatttt 26492244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 29508496 - 29508464
Alignment:
Q  231 gacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  29508496 gacacatataattacactgaattatatgatttt 29508464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 35161155 - 35161054
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| |||||| |||||| ||| ||||||  ||||| ||||||||||||||| ||| |||| || |||||||||||||||||||||||||||    
T  35161155 ctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgactctgatacttataattacactgaattatgtgatttt 35161056  T
Q  264 ct 265  Q
    ||    
T  35161055 ct 35161054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 23292924 - 23293025
Alignment:
Q  162 cactatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 261  Q
    |||||||||||||| ||||| ||||||| ||| |||| |  ||||| ||||||||||||||| ||||| ||||| | |||||| ||||||||||||||||    
T  23292924 cactatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgatt 23293023  T
Q  262 tt 263  Q
    ||    
T  23293024 tt 23293025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 35157924 - 35158024
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    ||||||||||||| ||||||||||||| | | ||||||  ||||  |||| |||||||||| ||||| ||||| |||||||||||| |||||||||||||    
T  35157924 actatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgattt 35158023  T
Q  263 t 263  Q
    |    
T  35158024 t 35158024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 8402721 - 8402783
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  8402721 gtgtcggacaagtgtcgtgtctgacactgagacatataattacactgaattatatgattttct 8402783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 40179575 - 40179675
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    ||||| ||||||||| | ||||||||| ||| ||||  | |||||  ||| |||||||||| ||||| ||| ||||||||||||||||||||||||||||    
T  40179575 actatcaagcacgaataattctcggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattt 40179674  T
Q  263 t 263  Q
    |    
T  40179675 t 40179675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 162 - 265
Target Start/End: Original strand, 8423656 - 8423759
Alignment:
Q  162 cactatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 261  Q
    |||||||| ||||| ||||||||| ||| ||| |||| |  ||||| ||||  ||||||||| ||||| ||||  |||||||||||||||||||||||||    
T  8423656 cactatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgatt 8423755  T
Q  262 ttct 265  Q
    ||||    
T  8423756 ttct 8423759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 49431145 - 49431046
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||| ||||| | ||||| ||||||||||| |||| |  ||||  ||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  49431145 ctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttt 49431046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 54580008 - 54580062
Alignment:
Q  209 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||    
T  54580008 gacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgatttt 54580062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 5414100 - 5414172
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 235  Q
    ||||||||||||| ||||| || |||||||| |||| |  ||||||||||||||||||||| |||||||||||    
T  5414100 actatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacac 5414172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 28964187 - 28964287
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    ||||||||||| | ||||| ||||||| ||| |||| |  ||||| || | |||||||||| ||||| ||||| | ||||||||||||||||||||||||    
T  28964187 actatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattt 28964286  T
Q  263 t 263  Q
    |    
T  28964287 t 28964287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 36635449 - 36635342
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac------atataattacactgaattatgt 257  Q
    |||||||||||| |||||  |||||| ||| |||| |  ||||| ||| |||||||||||||||||| ||||      ||||||||||||||||||||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacacgaacacatataattacactgaattatgt 36635350  T
Q  258 gattttct 265  Q
    ||||||||    
T  36635349 gattttct 36635342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 3947702 - 3947805
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtc-----tgacactgacacatataattacactgaattatgtga 259  Q
    ||||||||||| ||||| ||||||| ||| |||| || ||||| |||||||||||||||      ||||||||||| | |||||||||||||||||| ||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgcga 3947801  T
Q  260 tttt 263  Q
    ||||    
T  3947802 tttt 3947805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 9996941 - 9996858
Alignment:
Q  182 tctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||| ||| ||| ||||||  ||||| |||||||||  |||||||||| || ||||||||||| ||||||||||||||||||||    
T  9996941 tctccgattaggtgtgttccagtgtcggacacgtgttatgtctgacaccgagacatataattatactgaattatgtgattttct 9996858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 10499260 - 10499311
Alignment:
Q  214 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  10499260 gtgtcgggtccgacactgacacatataattacactaaattatgtgattttct 10499311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 12895214 - 12895313
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||||||||| ||||||| ||| |||| |   |||| || || ||||||||| ||||| ||||| |||||||||||  ||||||||||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgatttt 12895313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 22234819 - 22234890
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 235  Q
    |||||||||||||||||||||||||| ||  |||| || ||||| ||||||||||||||| ||||| |||||    
T  22234819 ctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacac 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 36509032 - 36509131
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||| ||| ||||||||||| |   |||| || || |||||||||||||| ||| ||| | ||||||||||||||||||  |||||||||||||    
T  36509032 ctatgaagcatgaatacttctcggattaaacgtgtcctggtatcagacacgtgtcgcgtccgacgccgacacatataattacacttgattatgtgatttt 36509131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 12797317 - 12797377
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||| || ||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  12797317 gtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 12797377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 19097859 - 19097935
Alignment:
Q  189 taaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||| | ||||||||||||||||| |||  ||||| |||| ||||||||| ||||||||| ||||||||||    
T  19097859 taaggcgtgtccccgtgtcagacacgtgtcatgttcgacaccgacaaatataattatactgaattacgtgattttct 19097935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 12324038 - 12323944
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgt------ctgacactgacacatataattacactgaatt 253  Q
    ||||||||||| ||||| ||||||||||| |||||| |||| || ||||||||| |||      | |||||||||| ||||||||||||||||||    
T  12324038 tatgaagcacggacactcctcggataaggtgtgttcccgtgccacacacgtgtcatgtccgacaccgacactgacatatataattacactgaatt 12323944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 16073513 - 16073414
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||| | ||||| ||||||| ||| ||||  | ||||| |||| || ||||||| ||||| ||||| | |||||||||||||||||| ||||||    
T  16073513 ctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcgatttt 16073414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 38846984 - 38847051
Alignment:
Q  196 tgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||| ||||| |||||||||||| || ||||||||||| | |||||||||||||| || |||||||    
T  38846984 tgttctggtgtcggacacgtgtcgtatccgacactgacacttgtaattacactgaataatatgatttt 38847051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 24613630 - 24613700
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgaca 234  Q
    |||||||||||| ||||| || |||| ||  |||| || ||||||||||||||||||||||||||| ||||    
T  24613630 ctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgaca 24613700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 30103296 - 30103397
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    |||||||||||   ||||| ||||||| ||  |||| ||  |||||||||  |||||||| |||||| ||||||||| |||||||| |||||||||||||    
T  30103296 actatgaagcagagacactcctcggattagatgtgtcctgatgtcagacatatgtcgtgtttgacaccgacacatatgattacact-aattatgtgattt 30103394  T
Q  263 tct 265  Q
    |||    
T  30103395 tct 30103397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 40613502 - 40613468
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||||||||||||    
T  40613502 gacacatataattacactgaattatgtgattttct 40613468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 903977 - 903940
Alignment:
Q  228 actgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  903977 actgatacatataattacactgaattatgtgattttct 903940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 5775358 - 5775399
Alignment:
Q  224 tgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  5775358 tgacaccgacacatataattacacttaattatgtgattttct 5775399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 2361954 - 2362014
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| |||||||| ||||| ||||| | |||||||||| |||||||| |||||    
T  2361954 gtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatgtaatttt 2362014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 20950420 - 20950456
Alignment:
Q  217 tcgtgtctgacactgacacatataattacactgaatt 253  Q
    ||||||||||||| |||||||||||||||||||||||    
T  20950420 tcgtgtctgacaccgacacatataattacactgaatt 20950456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 22440609 - 22440641
Alignment:
Q  233 cacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||||||||||    
T  22440609 cacatataattacactgaattatgtgattttct 22440641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 29205524 - 29205464
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| |||| ||||||||||  |||| ||||| | |||||||||||||||||||||||||    
T  29205524 gtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgatttt 29205464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 34306744 - 34306843
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcg-tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    |||||||||||||||| | ||| ||| ||| |||| |||| |||| ||||||||||||||| ||||| ||||| | ||||||||||  ||||| ||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgt-ctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactacattatctgattt 34306842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 19482798 - 19482739
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtc 223  Q
    |||||||||||||||||| ||||||| ||| |||| |  ||||| |||||||||||||||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtc 19482739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 13134502 - 13134468
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||| ||||||||||||||||    
T  13134502 gacacatataattacactaaattatgtgattttct 13134468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 16189761 - 16189727
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    |||||| ||||||||||||||||||||||||||||    
T  16189761 gacacacataattacactgaattatgtgattttct 16189727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 21945609 - 21945523
Alignment:
Q  177 acacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| ||||||| ||| |||||   ||||| |||| ||||| |||| ||||| ||||| | ||||||||||||||||||| |||||    
T  21945609 acactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcatttt 21945523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 23861369 - 23861470
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatat--aattacactgaattatgtgatt 261  Q
    ||||||||||||||||||  | | || ||| ||||  | ||| |||||| ||||||| |||||||| |||||||||  ||||||| ||||| ||||||||    
T  23861369 ctatgaagcacgaacactctttgaattaggcgtgtcttggtgacagacatgtgtcgtatctgacaccgacacatatataattacattgaatcatgtgatt 23861468  T
Q  262 tt 263  Q
    ||    
T  23861469 tt 23861470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 33950200 - 33950154
Alignment:
Q  219 gtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||| ||||||||| |||||| | ||||||||||||||||    
T  33950200 gtgtctgacaccgacacatatgattacattaaattatgtgattttct 33950154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 46083917 - 46083991
Alignment:
Q  161 acactatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 235  Q
    ||||||||||||| | ||||| |||  |||||| |||| | || ||||||||||||||||||| || ||||||||    
T  46083917 acactatgaagcatggacactcctcttataaggcgtgtccccgcgtcagacacgtgtcgtgtccgatactgacac 46083991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 18576045 - 18576078
Alignment:
Q  232 acacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||| |||||||||||||||||    
T  18576045 acacatataattacaccgaattatgtgattttct 18576078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Original strand, 35723385 - 35723418
Alignment:
Q  225 gacactgacacatataattacactgaattatgtg 258  Q
    |||||||||||||||||||||| |||||||||||    
T  35723385 gacactgacacatataattacattgaattatgtg 35723418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 42640594 - 42640549
Alignment:
Q  218 cgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||| ||||| ||||| | |||||||||||||||||||||||||    
T  42640594 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 42640549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 4157229 - 4157169
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| |||| |||||||||| ||||| ||||| | ||||| |||| ||||||||||||||    
T  4157229 gtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt 4157169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 4157516 - 4157456
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| |||| |||||||||| ||||| ||||| | ||||| |||| ||||||||||||||    
T  4157516 gtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt 4157456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 6933333 - 6933293
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||| |||| ||||||||||| ||||||||    
T  6933333 gacactgacacatatgattaaactgaattatgagattttct 6933293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 260
Target Start/End: Complemental strand, 15029816 - 15029788
Alignment:
Q  232 acacatataattacactgaattatgtgat 260  Q
    |||||||||||||||||||||||||||||    
T  15029816 acacatataattacactgaattatgtgat 15029788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 22234897 - 22234929
Alignment:
Q  231 gacacatataattacactgaattatgtgatttt 263  Q
    |||||||| ||||||||||||||||||||||||    
T  22234897 gacacatagaattacactgaattatgtgatttt 22234929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 30982879 - 30982919
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||| ||||||||||||||| |||||||||||||    
T  30982879 gacaccgacacttataattacactgaaatatgtgattttct 30982919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 44132645 - 44132685
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||||| ||||||||| ||||||||||    
T  44132645 gacaccgacacatataattatactgaattacgtgattttct 44132685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 46160954 - 46160914
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||| |||||||||||||| |||||||    
T  46160954 gacaccgacacatataataacactgaattatgttattttct 46160914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 8e-24; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 165 - 261
Target Start/End: Complemental strand, 12919063 - 12918967
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 261  Q
    ||||||||||||||||||||||||||||  |||| | |||||||||||||||||||||| || ||  ||||||||||| ||| ||||||||||||||    
T  12919063 tatgaagcacgaacacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtccgataccaacacatataatcacattgaattatgtgatt 12918967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 165 - 293
Target Start/End: Original strand, 40258874 - 40259002
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttc 264  Q
    ||||||||| | ||||| ||||||| ||| |||| || ||||| |||| |||||||||||||||| ||||| | |||||||||||||||||||||||||     
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttt 40258973  T
Q  265 tnnnnnnnttaattgtgtcgatgtccgtg 293  Q
    |       |||||||||||| ||||||||    
T  40258974 tcaaattattaattgtgtcggtgtccgtg 40259002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 264
Target Start/End: Original strand, 29163323 - 29163421
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttc 264  Q
    |||||||||||||||||||| ||| ||  |||| |  ||||||| ||||||||||||| ||||| |||||||||||||| | |||||||||||||||||    
T  29163323 atgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacacatataattaaattgaattatgtgattttc 29163421  T

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Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 30749959 - 30749858
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||| | ||||| |||| |||| | || | ||||||||| |||| ||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  30749959 ctatgaagcatggacactcctcgaataatgcgtatcctcgtgtcaaacacatgtggtgtccgacaccgacacatataattacactgaattatgtgatttt 30749860  T
Q  264 ct 265  Q
    ||    
T  30749859 ct 30749858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 30771410 - 30771309
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||| | ||||| |||| |||| | || | ||||||||| |||| ||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  30771410 ctatgaagcatggacactcctcgaataatgcgtatcctcgtgtcaaacacatgtggtgtccgacaccgacacatataattacactgaattatgtgatttt 30771311  T
Q  264 ct 265  Q
    ||    
T  30771310 ct 30771309  T

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Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 165 - 265
Target Start/End: Original strand, 10577676 - 10577776
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttc 264  Q
    ||||||||||| ||||| || |||||||| |||| | ||||||||||||| |||||||| | | | ||||||||||||||||||| ||| ||||||||||    
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccgcccccgacacatataattacactgcattttgtgattttc 10577775  T
Q  265 t 265  Q
    |    
T  10577776 t 10577776  T

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Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 5898206 - 5898305
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||| ||||||| ||||| ||||||| ||  |||| |  ||||  ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  5898206 ctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgatttt 5898305  T

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Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 18337448 - 18337349
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| ||||| ||||||| |||  ||| |  ||||| ||||||||| ||||| ||||| ||||| | |||||||||||||||||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 18337349  T

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Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 37598950 - 37598852
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| ||||| ||||||| ||| |||| |   |||| ||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt-tgtgatttt 37598852  T

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Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 265
Target Start/End: Original strand, 7918154 - 7918252
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtct-gacactgacacatataattacactgaattatgtgattt 262  Q
    |||||||||||| ||||| ||||||| ||| |||| || |||||||| ||||    || |  ||||||||||||||||||||||||||||||||||||||    
T  7918154 ctatgaagcacggacactcctcggattaggtgtgtcctggtgtcagaaacgt----tgacacgacactgacacatataattacactgaattatgtgattt 7918249  T

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Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 25361944 - 25361904
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25361944 gacactgacacatataattacactgaattatgtgattttct 25361904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 36878543 - 36878479
Alignment:
Q  201 tcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||| |||| || ||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  36878543 tcgtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtgattttct 36878479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 40181945 - 40181889
Alignment:
Q  209 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||    
T  40181945 gacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttct 40181889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 51410144 - 51410045
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcg-tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    |||||||||||||| ||| || |||| ||| |||| |||| |||| || |||||||||||| ||||| ||||| | ||||||||||||||||||||||||    
T  51410144 ctatgaagcacgaatactccttggattaggcgtgt-ctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 51410046  T

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Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 38078601 - 38078700
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||||| ||| ||||||| ||| |||| || ||||   ||| |||||||||| ||||| ||||| | |||||||| ||||||||||||||||    
T  38078601 ctatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgatttt 38078700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 263
Target Start/End: Original strand, 18190041 - 18190147
Alignment:
Q  157 ttggacactatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatg 256  Q
    |||| ||||||||||| |  ||||| ||||||| ||| |||| |  ||||| ||||||||| ||||||||||  ||||| | ||||||||||||||||||    
T  18190041 ttggtcactatgaagcgcatacactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatg 18190140  T
Q  257 tgatttt 263  Q
    | |||||    
T  18190141 taatttt 18190147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 265
Target Start/End: Original strand, 2896061 - 2896162
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||| || | |||||||| |||| ||| |||| |  || || ||||| ||||||||||||||| |||| |||||  |||||||||||||||||||||    
T  2896061 ctatgaaacatggacacttcttggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgatttt 2896160  T
Q  264 ct 265  Q
    ||    
T  2896161 ct 2896162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 22515826 - 22515926
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcg-tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 261  Q
    ||||||||||||| ||||| ||||||| ||| |||| |||| |||| || | |||||||||| ||||| ||||| | |||||||||| ||||||||||||    
T  22515826 actatgaagcacggacactcctcggattaggcgtgt-ctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatt 22515924  T
Q  262 tt 263  Q
    ||    
T  22515925 tt 22515926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 46348322 - 46348422
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcg-tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 261  Q
    ||||||||||||| ||||  ||||||| ||| |||| |||| |||| ||||||||||||||| ||||| ||||| | |||||||||| |||||| |||||    
T  46348322 actatgaagcacggacacacctcggatcaggcgtgt-ctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgatt 46348420  T
Q  262 tt 263  Q
    ||    
T  46348421 tt 46348422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 1815337 - 1815277
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| |||| |||||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  1815337 gtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgatttt 1815277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 32461393 - 32461465
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacaca 236  Q
    |||||||||||| |||||||| |||| ||| |||| |  ||||||||||||||||||||| ||||| ||||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacaca 32461465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 34371771 - 34371731
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  34371771 gacaccgacacatataattacactgaattatgtgattttct 34371731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 44482288 - 44482248
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  44482288 gacaccgacacatataattacactgaattatgtgattttct 44482248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 265
Target Start/End: Original strand, 1864882 - 1864921
Alignment:
Q  226 acactgacacatataattacactgaattatgtgattttct 265  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttct 1864921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 265
Target Start/End: Complemental strand, 10233310 - 10233271
Alignment:
Q  226 acactgacacatataattacactgaattatgtgattttct 265  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  10233310 acacagacacatataattacactgaattatgtgattttct 10233271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 17705576 - 17705626
Alignment:
Q  213 cgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttc 264  Q
    ||||||| ||| ||||| ||||||||||||||||||||||||||||||||||    
T  17705576 cgtgtcgcgtccgacac-gacacatataattacactgaattatgtgattttc 17705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 25934746 - 25934675
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 235  Q
    |||||||||||| ||||| || |||||||| || | | |||||||||||||||||||||| ||||| |||||    
T  25934746 ctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacac 25934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 1486646 - 1486748
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacact-----gacacatataattacactgaattatgtgat 260  Q
    |||||||||  ||||| ||||||| ||| |||| |  ||||| ||||||||||||||| |||||      ||||| ||||||||||||||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgat 1486745  T
Q  261 ttt 263  Q
    |||    
T  1486746 ttt 1486748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 2784620 - 2784574
Alignment:
Q  219 gtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  2784620 gtgtctgacaccgacacatataattatactcaattatgtgattttct 2784574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 13997957 - 13997903
Alignment:
Q  209 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||| ||||||| ||  |||| |||||||||||||||||||||||||||||||||    
T  13997957 gacatgtgtcgtctccaacaccgacacatataattacactgaattatgtgatttt 13997903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 23636044 - 23636090
Alignment:
Q  219 gtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||||    
T  23636044 gtgtctgacaccgacacatacaattacactgaattatgtaattttct 23636090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 43492473 - 43492535
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||| |||| ||||||||||| |||||| |||||||||| |||||| ||||||||||    
T  43492473 gtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaattacgtgattttct 43492535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 14332634 - 14332683
Alignment:
Q  216 gtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||| ||||| || ||||||||||||||| ||||||||||||||||    
T  14332634 gtcgtgtccgacaccgagacatataattacactaaattatgtgattttct 14332683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 25098563 - 25098596
Alignment:
Q  232 acacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||||||||||||||||||||||    
T  25098563 acacatataattacactgaattatgtgattttct 25098596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 42359391 - 42359488
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||| ||||| ||||||| ||| |||| |  ||||| |||||  ||| |||| ||||| ||||| | ||||||||||||||| |||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgatttt 42359488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 52903314 - 52903269
Alignment:
Q  218 cgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||||    
T  52903314 cgtgtccgacaccgacacatataattacactgaattatatgatttt 52903269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 13436523 - 13436479
Alignment:
Q  218 cgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    |||||| |||||  |||||||||||||||||||||||||||||||    
T  13436523 cgtgtccgacaccaacacatataattacactgaattatgtgattt 13436479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 265
Target Start/End: Complemental strand, 19324612 - 19324580
Alignment:
Q  233 cacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||||||||||    
T  19324612 cacatataattacactgaattatgtgattttct 19324580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 20157351 - 20157391
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  20157351 gacaccgacacatatgattacactgaattatgtgattttct 20157391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 28674874 - 28674818
Alignment:
Q  209 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||| ||||||||||||||||  ||| ||||||||| |||||||||||| |||||||    
T  28674874 gacaagtgtcgtgtctgacaccaacatatataattatactgaattatgtaattttct 28674818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 34712384 - 34712424
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  34712384 gacactgacacatataattacactaaattatgttattttct 34712424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 9709885 - 9709838
Alignment:
Q  218 cgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||| ||||| ||||||||||||||||  |||||||||||||||||    
T  9709885 cgtgtccgacaccgacacatataattacaacgaattatgtgattttct 9709838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 9828174 - 9828103
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 235  Q
    |||||||||||| ||||| ||||||| ||  |||| |  ||||| ||||||||||||||||||||| |||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacac 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 5944341 - 5944303
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  5944341 gacaccgacacttataattacactgaattatgtgatttt 5944303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 9828102 - 9828064
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| |||||||| ||||||||||||||||||||||||    
T  9828102 gacaccgacacataaaattacactgaattatgtgatttt 9828064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 18556384 - 18556450
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacac 229  Q
    ||||||||||||| ||||||||||||| ||| |||| |  ||||| || |||||||| |||||||||    
T  18556384 actatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacac 18556450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 253
Target Start/End: Original strand, 27965940 - 27966027
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaatt 253  Q
    |||||||||| | ||||| ||||||| ||| |||| |  ||||||| |||| | |||||||||||| |  ||||||||||||||||||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcaggcacgaggcgtgtctgacacgg--acatataattacactgaatt 27966027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 35919277 - 35919315
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  35919277 gacacggacacttataattacactgaattatgtgatttt 35919315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 39130754 - 39130808
Alignment:
Q  211 cacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||| ||||| ||||| |||||||||||||||||| |||||| | |||||||    
T  39130754 cacgtgttgtgtccgacaccgacacatataattacactaaattatataattttct 39130808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 39953141 - 39953187
Alignment:
Q  219 gtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||| |||||||| ||||||||| ||||||||||||||||    
T  39953141 gtgtccgacaccgacacatacaattacactaaattatgtgattttct 39953187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Complemental strand, 6427401 - 6427368
Alignment:
Q  232 acacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||| ||||||||||||||||||    
T  6427401 acacatataattacattgaattatgtgattttct 6427368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 17754368 - 17754331
Alignment:
Q  226 acactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  17754368 acactgacacatatagttacactgaattatgtaatttt 17754331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 22881606 - 22881655
Alignment:
Q  214 gtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||| ||||| ||||| | |||||||||| ||||||||||||||    
T  22881606 gtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 22881655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 26830660 - 26830608
Alignment:
Q  210 acacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||| ||||||||||| ||||| |||||||||| | ||||||||||||||    
T  26830660 acacgtgtagtgtctgacac-gacacttataattacatttaattatgtgatttt 26830608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Complemental strand, 36906048 - 36906015
Alignment:
Q  232 acacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||| |||||||||||||||||||    
T  36906048 acacatataattactctgaattatgtgattttct 36906015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 398772 - 398804
Alignment:
Q  231 gacacatataattacactgaattatgtgatttt 263  Q
    ||||| |||||||||||||||||||||||||||    
T  398772 gacacctataattacactgaattatgtgatttt 398804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 12443469 - 12443501
Alignment:
Q  233 cacatataattacactgaattatgtgattttct 265  Q
    |||||| ||||||||||||||||||||||||||    
T  12443469 cacatacaattacactgaattatgtgattttct 12443501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 21038141 - 21038101
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||| ||||| ||||||||||||||||| |||||||    
T  21038141 gacactgacgcatatgattacactgaattatgtaattttct 21038101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 25272540 - 25272500
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||| |||||||||||| ||||||||||||||||    
T  25272540 gacaccgacacttataattacactaaattatgtgattttct 25272500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 265
Target Start/End: Complemental strand, 34298482 - 34298454
Alignment:
Q  237 tataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||||||    
T  34298482 tataattacactgaattatgtgattttct 34298454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 38503378 - 38503338
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||||||||||||||||||| ||| |||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttct 38503338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 41597410 - 41597482
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacaca 236  Q
    |||||||||||  ||||| || |||||| | || | | |||||||||||||||||||||| ||||| ||||||    
T  41597410 ctatgaagcacagacactccttggataaagcgtatccccgtgtcagacacgtgtcgtgtccgacacggacaca 41597482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 47989628 - 47989556
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 235  Q
    ||||||||||||| ||||| ||||||| ||| |||| |   ||||||||| |||||||||| ||||| |||||    
T  47989628 actatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 166 - 265
Target Start/End: Complemental strand, 3025668 - 3025569
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||| ||||| ||||||| ||  ||||    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttct 3025569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 3951476 - 3951575
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| | ||| || |||| ||| |||||| |||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacacatataagtacactgcattttgtgatttt 3951575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 165 - 264
Target Start/End: Original strand, 43737752 - 43737851
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttc 264  Q
    ||||||||||| ||||| || |||||||| || | | |||||||||||| ||||||||| ||||| ||||||||||||||||||| ||| ||||||||||    
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacacatataattacactgtattttgtgattttc 43737851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 14134818 - 14134717
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||| |||| ||||| |||| || ||| |||| || ||| | |||||||||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  14134818 ctatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgatttt 14134719  T
Q  264 ct 265  Q
    ||    
T  14134718 ct 14134717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 166 - 265
Target Start/End: Original strand, 20679337 - 20679436
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||| | ||||| ||||| ||||| |||| |  ||||| ||||||||| | ||||||||| ||||| ||||||||||||||| |||||||||||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattttct 20679436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 265
Target Start/End: Original strand, 26902104 - 26902216
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacact-----------gacacatataattacactgaat 252  Q
    |||||||||||| ||||| ||| ||||||| |||| | |||| ||||||||||||||||| ||||||           ||||||||||||||||||||||    
T  26902104 ctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaat 26902203  T
Q  253 tatgtgattttct 265  Q
    |||||||||||||    
T  26902204 tatgtgattttct 26902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 33405363 - 33405425
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||| ||||||    
T  33405363 gtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttct 33405425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 34450958 - 34451032
Alignment:
Q  161 acactatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 235  Q
    ||||||||||||||| ||||| || |||||||| |||| | |||||||||||||||||||||| ||||| |||||    
T  34450958 acactatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 4786324 - 4786379
Alignment:
Q  210 acacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||| |||||| || ||||| |||||||||||||||||||||||||||||||||||    
T  4786324 acacatgtcgtatccgacaccgacacatataattacactgaattatgtgattttct 4786379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 36450694 - 36450793
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||  ||||| ||||||| ||| |||| || ||||| |||||| |||||||| |||||  |||| | ||||||||||||||| |||||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgatttt 36450793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 31557093 - 31557016
Alignment:
Q  186 ggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||| ||| |||| || ||||| |||| |||||||||||||||| || || | |||||||||||||||||||||||||    
T  31557093 ggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgatttt 31557016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 9414860 - 9414912
Alignment:
Q  209 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 261  Q
    |||||||||||||||||||||  |||| ||||||| |||||||||||||||||    
T  9414860 gacacgtgtcgtgtctgacaccaacacttataattgcactgaattatgtgatt 9414912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 40332265 - 40332209
Alignment:
Q  209 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||  |||| ||||| | |||||||||||||||||||||||||||    
T  40332265 gacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttct 40332209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 265
Target Start/End: Original strand, 926730 - 926829
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||| ||||| ||||||||| |  ||| |  ||||| ||||||||||| ||| ||||| ||||| |||||||||||||||  ||| ||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttct 926829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 8293931 - 8293848
Alignment:
Q  177 acacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgat 260  Q
    ||||| ||||||| ||| |||| |  |||||||| | ||||| ||| |||||| |||||||||||||||||||||||| |||||    
T  8293931 acactcctcggattaggtgtgtccaggtgtcagatatgtgtcatgtttgacaccgacacatataattacactgaattacgtgat 8293848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 18407838 - 18407739
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| ||||| |||  || ||| |||| || ||||| |||| |||||||||| | ||  ||||| | |||||||||||||||||||||||||    
T  18407838 ctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatttt 18407739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 11927087 - 11927125
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  11927087 gacaccgacacatataattacactgaattatgtgatttt 11927125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 13844591 - 13844637
Alignment:
Q  219 gtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttct 13844637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 34897137 - 34897103
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||||||||||||    
T  34897137 gacacatataattacactgaattatgtgattttct 34897103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 37283796 - 37283851
Alignment:
Q  208 agacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||||  |||| ||||||||  |||||||||||||||||||||||||    
T  37283796 agacacgtgtcgtgtcccacaccgacacata--attacactgaattatgtgattttct 37283851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 126332 - 126369
Alignment:
Q  209 gacacgtgtcgtgtctgacactgacacatataattaca 246  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  126332 gacacgtgtcgtgtccgacactgacacatataattaca 126369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 262
Target Start/End: Complemental strand, 8847314 - 8847277
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattt 262  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  8847314 gacaccgacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 265
Target Start/End: Complemental strand, 11803310 - 11803277
Alignment:
Q  232 acacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||||||||||||||||||||||    
T  11803310 acacatataattacactgaattatgtgattttct 11803277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 12606825 - 12606870
Alignment:
Q  220 tgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||| |||||||||||||||| |||||||| |||||||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattttct 12606870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 24413499 - 24413592
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgt 257  Q
    |||||||||||| ||||||||||||| ||  |||| |   |||  ||||||  ||||||| ||||||||||| ||||||||| |||||||||||    
T  24413499 ctatgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgacacttataattaccctgaattatgt 24413592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 261
Target Start/End: Original strand, 24362203 - 24362239
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatt 261  Q
    |||| ||||||||||||||||||||||||||||||||    
T  24362203 gacattgacacatataattacactgaattatgtgatt 24362239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 31236570 - 31236618
Alignment:
Q  217 tcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||| | ||| |||||||||||||||| ||||||||||||||||||    
T  31236570 tcgtgtccgtcaccgacacatataattacattgaattatgtgattttct 31236618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 265
Target Start/End: Complemental strand, 18964234 - 18964195
Alignment:
Q  226 acactgacacatataattacactgaattatgtgattttct 265  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  18964234 acaccgacacatataattacattgaattatgtgattttct 18964195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 4948718 - 4948672
Alignment:
Q  217 tcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  4948718 tcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 4948672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 11944723 - 11944685
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  11944723 gacaccgacacatataattacactgagttatgtgatttt 11944685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 20873143 - 20873089
Alignment:
Q  209 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||| ||||||| ||||| ||||| | |||||||||| ||||||||||||||    
T  20873143 gacacgtatcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 20873089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 27213599 - 27213565
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||| ||||||||||||||||||    
T  27213599 gacacatataattacagtgaattatgtgattttct 27213565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 28384994 - 28385032
Alignment:
Q  224 tgacactgacacatataattacactgaattatgtgattt 262  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  28384994 tgacaccgacacatataattacactgaattatgagattt 28385032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 265
Target Start/End: Complemental strand, 38079079 - 38079017
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||| | |||||||| ||||  ||| |||||||||||||||||| ||||||||||||    
T  38079079 gtgtcggacatgcgtcgtgtccgacatcgacgcatataattacactgaatcatgtgattttct 38079017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 39820547 - 39820447
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtc-gtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    |||||||||||| ||||||||||||| ||| ||| || |||||| |||||| ||| ||||| ||||| ||||| ||| |||||||| |||||| | ||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtg-tcccgtgtcggacacgcgtcggtgtccgacac-gacacctatgattacactaaattatatcattt 39820450  T
Q  263 tct 265  Q
    |||    
T  39820449 tct 39820447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Complemental strand, 14731763 - 14731730
Alignment:
Q  232 acacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||||| ||||||||||||||||    
T  14731763 acacatataattacactaaattatgtgattttct 14731730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 22204706 - 22204669
Alignment:
Q  218 cgtgtctgacactgacacatataattacactgaattat 255  Q
    |||||||||||||||||| | |||||||||||||||||    
T  22204706 cgtgtctgacactgacacttgtaattacactgaattat 22204669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 29447040 - 29447109
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgaca 234  Q
    ||||||||||| ||||| || |||| ||| |||| || ||||||||||| ||||||||| ||||| ||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgaca 29447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 31580071 - 31580168
Alignment:
Q  168 gaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||| ||||||  ||||||| ||| |||||   |||||  ||| |||||| ||| ||||  ||||| |||||||||||| ||||||||||||||||    
T  31580071 gaagcatgaacacccctcggattaggtgtgtttcggtgtcgaacatgtgtcgcgtccgacatcgacacctataattacactcaattatgtgattttct 31580168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 33382019 - 33382060
Alignment:
Q  224 tgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||| ||||||||||||||| ||||||||||| |||||||    
T  33382019 tgacaccgacacatataattactctgaattatgtcattttct 33382060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 31109463 - 31109559
Alignment:
Q  169 aagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||| ||||| ||||||| ||| |||| |  |||||| |||||   | |||| |||||||||||||||| ||| |||||||| | |||||||||    
T  31109463 aagcacggacactcctcggattaggcgtgtcccagtgtcatacacgacacatgtccgacactgacacatatagttagactgaattgtttgattttct 31109559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 34222999 - 34222967
Alignment:
Q  231 gacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||||||||| ||||||||||||||    
T  34222999 gacacatataattacacttaattatgtgatttt 34222967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 39954288 - 39954320
Alignment:
Q  233 cacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||| ||||||||||||||||    
T  39954288 cacatataattacactaaattatgtgattttct 39954320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 34595253 - 34595154
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| ||||| ||||||| ||| |||| |  ||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 34595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 165 - 265
Target Start/End: Complemental strand, 9658998 - 9658897
Alignment:
Q  165 tatgaagcacgaacacttctcgga-taaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||| ||||| || ||| | ||| ||||||  |||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgatttt 9658899  T
Q  264 ct 265  Q
    ||    
T  9658898 ct 9658897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 28152218 - 28152118
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    ||||||||||||||||||| ||||||| |||  ||| |  ||||| ||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||    
T  28152218 actatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 28152119  T
Q  263 t 263  Q
    |    
T  28152118 t 28152118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 164 - 265
Target Start/End: Original strand, 17327590 - 17327696
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtc-----tgacactgacacatataattacactgaattatgtg 258  Q
    |||||||||||| ||||| ||||||| ||| |||| |  |||||||||||||||||||||      |||||||||||||||| ||||||| |||||||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatgtg 17327689  T
Q  259 attttct 265  Q
    |||||||    
T  17327690 attttct 17327696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 33001268 - 33001328
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| | ||||||||||||||    
T  33001268 gtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgatttt 33001328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 19040421 - 19040370
Alignment:
Q  214 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  19040421 gtgtcgtgtccgacacagacacatataattacactgaattatgtgattttct 19040370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 28715414 - 28715315
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| |||||||||| || ||| |||| |  |||||  |||||||||||||| ||||| ||||| | ||||||||||||||||||| |||||    
T  28715414 ctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcatttt 28715315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 7378098 - 7377997
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| ||||||||| ||| ||  |||| |  ||||| ||  | ||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  7378098 ctatgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatgtgatttt 7377999  T
Q  264 ct 265  Q
    ||    
T  7377998 ct 7377997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 4388199 - 4388103
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||  ||||||||||||||||| |||| ||||||||||||||    ||   | ||||||||||||||||||||| ||| |||||||||||||    
T  4388199 ctatgaagcacagacacttctcggataaggcgtgtcctcgtgtcagacac----cgccac-gacactgacacatataattaccctggattatgtgatttt 4388105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 7740712 - 7740660
Alignment:
Q  212 acgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttc 264  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||||||||    
T  7740712 acgtgtcgtgtccgacactgacacatataattacactcaattttgtgattttc 7740660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 11968709 - 11968749
Alignment:
Q  59 acaactaaaatcaaacatgaacataacataaacattcatgc 99  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11968709 acaactaaaatcaaacatgaacataacataaacattcatgc 11968749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 265
Target Start/End: Original strand, 7265535 - 7265634
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||| || || ||||||| |||  | |||  ||||| |||| || | ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  7265535 atgaagcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttct 7265634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 13360312 - 13360413
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctc-gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 261  Q
    ||||||||||||| |||||  |||||| ||| |||| ||| ||||| ||||  ||| ||||||||||| || ||||||||||||||||||||||||||||    
T  13360312 actatgaagcacggacactcttcggattaggcgtgt-ctcagtgtcggacat-tgttgtgtctgacaccgaaacatataattacactgaattatgtgatt 13360409  T
Q  262 ttct 265  Q
    ||||    
T  13360410 ttct 13360413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 13789273 - 13789174
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||||||||| || | |||||| || | | | ||||||||||||||| |||| |||| ||| |||||||||||||||| ||| | |||||||    
T  13789273 ctatgaagcacgaacactccttgaataaggcgtatccccatgtcagacacgtgtcatgtccgacattgatacatataattacactgcattttatgatttt 13789174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 13797892 - 13797793
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||||||||| || | |||||| || | | | ||||||||||||||| |||| |||| ||| |||||||||||||||| ||| | |||||||    
T  13797892 ctatgaagcacgaacactccttgaataaggcgtatccccatgtcagacacgtgtcatgtccgacattgatacatataattacactgcattttatgatttt 13797793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 18367966 - 18367895
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 235  Q
    |||||||||||| ||||| || |||||||| |||| | ||||||||||| |||||||||||||||| |||||    
T  18367966 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacac 18367895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 265
Target Start/End: Original strand, 32511592 - 32511707
Alignment:
Q  150 acattagttggacactatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactg 249  Q
    |||||| ||||  ||||||||||||| ||||| ||| ||| ||| ||| ||   |||||||||  |||||| || |||||  |||| |||||||||||||    
T  32511592 acattatttgggaactatgaagcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactg 32511691  T
Q  250 aattatgtgattttct 265  Q
    ||||||||||||||||    
T  32511692 aattatgtgattttct 32511707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 9025495 - 9025535
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  9025495 gacaccgacacatataattacactgaattatgtgattttct 9025535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 16488518 - 16488590
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 235  Q
    ||||||||||||||||| | || |||||||| |||| | |||| ||||||||||||||||| ||||| |||||    
T  16488518 actatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 16488590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 24645561 - 24645501
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| ||||||||||||||||||||| ||||| | ||| || ||||||||||||||||||    
T  24645561 gtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgatttt 24645501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 4878061 - 4877967
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtga 259  Q
    |||||||||||| ||||| ||||||| ||| |||| || ||||| |||| |||||||||| ||||| ||||| | |||||| ||| ||||||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgtcct-gtgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtga 4877967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 12627534 - 12627616
Alignment:
Q  181 ttctcggataaggagtgttctcg-tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||| |||||||| |||| |||| |||| |||| ||||| ||||  ||||||||| |||||||||||||||||||||||    
T  12627534 ttctcggattaggagtgt-ctcggtgtcggacatgtgtggtgtccgacatcgacacatattattacactgaattatgtgatttt 12627616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 16833427 - 16833328
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||| ||  ||||| |||||||  || |||| || ||||| ||| |||||||||||| |||| ||||| | ||||||||||||| |||||||||||    
T  16833427 ctatgaagtacagacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgatttt 16833328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 17841530 - 17841628
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctc-gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||| ||||| ||||||| ||| |||| ||| ||||| ||||| ||||||||| ||||| | ||| | |||||||||| ||||||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgt-ctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgatttt 17841628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 30851676 - 30851620
Alignment:
Q  207 cagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||  |||||||||||    
T  30851676 cagacacgtgtcgtgtccgacaccgacacatataattacattgaat--tgtgattttct 30851620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 7027300 - 7027262
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  7027300 gacaccgacacatataattacactgaattatgtgatttt 7027262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 11591877 - 11591911
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||||||||||||    
T  11591877 gacacatataattacactgaattatgtgattttct 11591911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 263
Target Start/End: Complemental strand, 12696446 - 12696344
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtc-----tgacactgacacatataattacactgaattatgtgat 260  Q
    |||||||||  ||||| || |||||||| |||| |  |||||||||||||||||||||      ||||||||||| | ||||||||||||||||||| ||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaat 12696347  T
Q  261 ttt 263  Q
    |||    
T  12696346 ttt 12696344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 13364684 - 13364746
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||| || |||||||  |||| ||||||||| ||||||||||||||| |||||||||    
T  13364684 gtgtcagacatgtatcgtgtccaacaccgacacatatgattacactgaattatatgattttct 13364746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 26562741 - 26562707
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||||||||||||    
T  26562741 gacacatataattacactgaattatgtgattttct 26562707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 11968749 - 11968782
Alignment:
Q  134 cgatatagtaaaaggtacattagttggacactat 167  Q
    ||||||||||||||||||||||||||||||||||    
T  11968749 cgatatagtaaaaggtacattagttggacactat 11968782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 29020985 - 29020932
Alignment:
Q  210 acacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||||| |||||  |||| |||||||||||||||||||| ||||||    
T  29020985 acacgtgtcgtgtccgacacaaacacctataattacactgaattatgcgatttt 29020932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 31579212 - 31579266
Alignment:
Q  209 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||| |||||||||| ||||| ||||||||  |||||||||||||||||||||||||    
T  31579212 gacatgtgtcgtgtccgacaccgacacata--attacactgaattatgtgattttct 31579266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 9617492 - 9617452
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  9617492 gacaccgacacatataattacattgaattatgtgattttct 9617452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 9629441 - 9629401
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  9629441 gacaccgacacatataattacattgaattatgtgattttct 9629401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 5732504 - 5732551
Alignment:
Q  218 cgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||| ||||| |||||||||||||||||| || |||||||||||||    
T  5732504 cgtgtccgacaccgacacatataattacactaaaatatgtgattttct 5732551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 265
Target Start/End: Complemental strand, 7086852 - 7086813
Alignment:
Q  226 acactgacacatataattacactgaattatgtgattttct 265  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttct 7086813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 263
Target Start/End: Complemental strand, 8101144 - 8101105
Alignment:
Q  224 tgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  8101144 tgacactgacacatataattacactggattatatgatttt 8101105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 10339128 - 10339167
Alignment:
Q  227 cactgacacatataatta-cactgaattatgtgattttct 265  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  10339128 cactgacacatataattaacactgaattatgtgattttct 10339167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 262
Target Start/End: Original strand, 6898221 - 6898319
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    ||||||||||||||||||  |||||| ||| |||||   ||||  ||||||  ||||||| ||||| ||||| | |||||||||| |||||||| ||||    
T  6898221 ctatgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacacttaattatgtaattt 6898319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 255
Target Start/End: Original strand, 9750450 - 9750480
Alignment:
Q  225 gacactgacacatataattacactgaattat 255  Q
    |||||||||||||||||||||||||||||||    
T  9750450 gacactgacacatataattacactgaattat 9750480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 17341669 - 17341703
Alignment:
Q  229 ctgacacatataattacactgaattatgtgatttt 263  Q
    ||||||| |||||||||||||||||||||||||||    
T  17341669 ctgacacttataattacactgaattatgtgatttt 17341703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 21924930 - 21924976
Alignment:
Q  219 gtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||| ||||||||||||||||||||||||| |||| ||||    
T  21924930 gtgtccgacaccgacacatataattacactgaattatttgatattct 21924976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 30866151 - 30866185
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||| ||||||||||||||||||    
T  30866151 gacacatataattacattgaattatgtgattttct 30866185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 31384978 - 31384940
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  31384978 gacactgacacttgtaattacactgaattatgtgatttt 31384940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 32298549 - 32298643
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgat 260  Q
    |||||||| |||||||  ||  || ||| ||||||| ||||  ||||  |||| ||||||||||  ||||||||||||||||| |||||||||||    
T  32298549 atgaagcatgaacactcatcaaattaggcgtgttctggtgttggacatatgtcatgtctgacaccaacacatataattacactaaattatgtgat 32298643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 265
Target Start/End: Original strand, 7996325 - 7996419
Alignment:
Q  167 tgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||| | ||| || |||| ||| |||| | ||||| ||||||||||||     ||||| ||| ||||||||||||||||||||| |||||||||    
T  7996325 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg----cgacaccgacgcatataattacactgaattatatgattttct 7996419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 265
Target Start/End: Complemental strand, 8022476 - 8022382
Alignment:
Q  167 tgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||| | ||| || |||| ||| |||| | ||||| ||||||||||||     ||||| ||| ||||||||||||||||||||| |||||||||    
T  8022476 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg----cgacaccgacgcatataattacactgaattatatgattttct 8022382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 19044523 - 19044482
Alignment:
Q  224 tgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||| |||||||||||| ||||||||||||||||| ||||    
T  19044523 tgacaccgacacatataataacactgaattatgtgatattct 19044482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 1700416 - 1700372
Alignment:
Q  219 gtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| ||||| ||||| ||||||||||||||| |||||||||||    
T  1700416 gtgtccgacaccgacacttataattacactgaaatatgtgatttt 1700372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 7977770 - 7977869
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgt-gtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    |||||||||||||||||| ||  ||| ||| ||||| |||| ||| ||||  ||| ||||| ||||| ||||| | ||||||||||||||||||| ||||    
T  7977770 ctatgaagcacgaacactccttagattaggcgtgtt-tcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaattt 7977868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 9024177 - 9024217
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||| |||||| |||||||||| |||||||    
T  9024177 gacactgacacatatgattacattgaattatgtcattttct 9024217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 261
Target Start/End: Complemental strand, 9027236 - 9027200
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatt 261  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  9027236 gacaccgacacatataattacacggaattatgtgatt 9027200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 9195755 - 9195795
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||||||||| |||||||| |||||||    
T  9195755 gacaccgacacatataattacactaaattatgtcattttct 9195795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 34073348 - 34073388
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||| |||||||||||||||||||||| ||||||||    
T  34073348 gacaccgacccatataattacactgaattatgagattttct 34073388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 30098977 - 30099075
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatt 261  Q
    |||| |||||||||||||| || |||||||| |||| | ||||||||||||||||||| || ||||| ||||||||||||||||| |||||||| ||||    
T  30098977 actacgaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacacatataattacacagaattatgcgatt 30099075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 21576685 - 21576784
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| ||||| ||||||| ||| |||| |  ||||||||||||||||||||| ||||  ||||| | |||||||||||||||||||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgatttt 21576784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 42029871 - 42029770
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||| ||||| ||||| ||||||||||| ||||   |||| |||||| |||||||||| ||||| || ||||||||||||| ||||||||||||||||    
T  42029871 ctatgatgcacggacactcctcggataaggcgtgtctacgtgacagacatgtgtcgtgtccgacaccgatacatataattacattgaattatgtgatttt 42029772  T
Q  264 ct 265  Q
    ||    
T  42029771 ct 42029770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 43565000 - 43564901
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| ||||||||||||| ||| |||| |  | ||| ||||| ||||||||| ||||| ||||| |||||||||||| ||||||||||||||    
T  43565000 ctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatttt 43564901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 265
Target Start/End: Original strand, 28588614 - 28588715
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||| | |||||  |||||| | | |||| || |||||||| | |||||||||| ||||| ||||| |||||||||||||||||||||||||||    
T  28588614 ctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgatttt 28588713  T
Q  264 ct 265  Q
    ||    
T  28588714 ct 28588715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 265
Target Start/End: Complemental strand, 26312875 - 26312787
Alignment:
Q  177 acacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||||| ||| |||| || ||||||||||||| ||||||| ||||| || |||||||||||||||||||||  |||||||||    
T  26312875 acactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatacatataattacactgaattaattgattttct 26312787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 166 - 265
Target Start/End: Original strand, 30502330 - 30502429
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||| | || |||| |||  ||| |  ||||| |||| |||||||||| ||||| |||||||||||||||||||||||| ||||||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttct 30502429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 166 - 265
Target Start/End: Original strand, 30542673 - 30542772
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||| | || |||| |||  ||| |  ||||| |||| |||||||||| ||||| |||||||||||||||||||||||| ||||||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttct 30542772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 21190998 - 21191095
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||| ||||| ||||||| ||| |||| |  | ||| ||||||||| ||||| ||||| ||||| | |||||||||||||||||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 21191095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 12927727 - 12927672
Alignment:
Q  210 acacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||    
T  12927727 acacgtgtcatgtctgacactgacatatataattacactaaattatatgattttct 12927672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 42893479 - 42893380
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||| | ||||| |||  || ||| |||| || ||||| ||||||||| ||||||||||| ||||| | ||||||||||| |||||||||||||    
T  42893479 ctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgatttt 42893380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 6401627 - 6401557
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 235  Q
    ||||||||||| ||||| || |||||||| || | | |||||||||||||||||||||| |||||||||||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacac 6401557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 27932354 - 27932253
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||| |||||| |||| || ||| |||| || ||||| ||||||||||||||| |||||  | |  | ||||||||||||||||||| |||||    
T  27932354 ctatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaatttt 27932255  T
Q  264 ct 265  Q
    ||    
T  27932254 ct 27932253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 32630715 - 32630776
Alignment:
Q  204 tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||| |||||||||||| || |||||||||||||||||||||| |||||||| | |||||||    
T  32630715 tgtcggacacgtgtcgtatccgacactgacacatataattacattgaattatataattttct 32630776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 18421826 - 18421882
Alignment:
Q  209 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||| |||||||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  18421826 gacatgtgtcgtgtccgacgccgacacatataattacactggattatgtgattttct 18421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 21814392 - 21814320
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacac 235  Q
    ||||||||||||||||| | || |||||||| |||| | |||| ||||||||||||||||| ||||| |||||    
T  21814392 actatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 21814320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 23012387 - 23012449
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||| ||||||||||  |||| |||||||||||||||| | |||||| |||||||||    
T  23012387 gtgtcagacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttct 23012449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 30098457 - 30098387
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgac 233  Q
    ||||||||||||| ||| | ||||||| ||| |||| || ||||| ||||||||||||||| |||||||||    
T  30098457 actatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacactgac 30098387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 39758324 - 39758290
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||||||||||||    
T  39758324 gacacatataattacactgaattatgtgattttct 39758290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 41091264 - 41091298
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||||||||||||    
T  41091264 gacacatataattacactgaattatgtgattttct 41091298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 6471897 - 6471930
Alignment:
Q  232 acacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||||||||||||||||||||||    
T  6471897 acacatataattacactgaattatgtgattttct 6471930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 6770615 - 6770561
Alignment:
Q  209 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||| |||||||||| ||||||||||||||  | |||||||||||||||||||||||    
T  6770615 gacatgtgtcgtgtccgacactgacacata--agtacactgaattatgtgattttct 6770561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 15884057 - 15884008
Alignment:
Q  214 gtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  15884057 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 15884008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 3966561 - 3966521
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  3966561 gacaccgacacatataattacactgaattgtgtgattttct 3966521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 24273039 - 24273071
Alignment:
Q  233 cacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||||||||||    
T  24273039 cacatataattacactgaattatgtgattttct 24273071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 265
Target Start/End: Complemental strand, 24389175 - 24389143
Alignment:
Q  233 cacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||||||||||    
T  24389175 cacatataattacactgaattatgtgattttct 24389143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 16203785 - 16203836
Alignment:
Q  214 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||| ||||| |||||||||||||||||| ||||||| ||||||||    
T  16203785 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttct 16203836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 21194195 - 21194246
Alignment:
Q  214 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||| |||||| ||||  || |||||||||||||||||||||||||    
T  21194195 gtgtcgtgtccgacactaacaccaatgattacactgaattatgtgattttct 21194246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 6247692 - 6247642
Alignment:
Q  213 cgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||| |||||| ||||| ||||| | |||||||||||||||||||||||||    
T  6247692 cgtgccgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 6247642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 14873641 - 14873535
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtc-----tgacactgacacatataattacactgaattatgtg 258  Q
    |||||||||||| ||||| ||||||| ||| |||| |  ||||  ||||||||| | |||     |||||| |||||||||||||||||| |||||||||    
T  14873641 ctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgacatgacaccgacacatataattacactaaattatgtg 14873542  T
Q  259 attttct 265  Q
     ||||||    
T  14873541 cttttct 14873535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 265
Target Start/End: Complemental strand, 17123167 - 17123066
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    ||||||||||||| ||||| ||||||| ||| |||| | |||||| |||| || |||||||  |||| |||| ||||||||  |||  ||||||||||||    
T  17123167 actatgaagcacggacactcctcggattaggcgtgtcc-cgtgtcggacatgtttcgtgtccaacaccgacatatataattgtacttgattatgtgattt 17123069  T
Q  263 tct 265  Q
    |||    
T  17123068 tct 17123066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 23015996 - 23016030
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||||||||||||||||||||    
T  23015996 gacacctataattacactgaattatgtgattttct 23016030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 39698599 - 39698561
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  39698599 gacactgacacttgtaattacactgaattatgtgatttt 39698561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 12264829 - 12264870
Alignment:
Q  224 tgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||||||||||||||||||||| |||| |||||||    
T  12264829 tgacattgacacatataattacactgaatcatgtaattttct 12264870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 265
Target Start/End: Original strand, 21194063 - 21194164
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||| ||||||| ||||| ||||||| ||| |||  |  ||||| |||| ||||||||||  ||||  | || |||||||||||||||| ||||||||||    
T  21194063 ctataaagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaatgatgtgatttt 21194162  T
Q  264 ct 265  Q
    ||    
T  21194163 ct 21194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 23287348 - 23287389
Alignment:
Q  223 ctgacactgacacatataattacactgaattatgtgattttc 264  Q
    |||||||||||||||||||||| | |||||||||| ||||||    
T  23287348 ctgacactgacacatataattatattgaattatgtcattttc 23287389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 4105374 - 4105282
Alignment:
Q  168 gaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgat 260  Q
    |||||||| ||||| ||||||| ||| |||| |  || |||||||| | ||| |||||| ||  |||| | ||||||||||||||||||||||    
T  4105374 gaagcacggacactcctcggattaggcgtgtcccagtatcagacacatatcgagtctgatacctacacttgtaattacactgaattatgtgat 4105282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 5467985 - 5468017
Alignment:
Q  231 gacacatataattacactgaattatgtgatttt 263  Q
    ||||| |||||||||||||||||||||||||||    
T  5467985 gacacctataattacactgaattatgtgatttt 5468017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 265
Target Start/End: Original strand, 7997108 - 7997207
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtc-gtgtctgacactgacacatataattacactgaattatgtgattttc 264  Q
    ||||||||| ||||||||||| || ||| |||| ||  |||| |||||| ||| ||||| ||||| ||||| ||||||||||||| ||||| | ||||||    
T  7997108 atgaagcacaaacacttctcgaattaggtgtgtcctgatgtcggacacgcgtcagtgtccgacac-gacacttataattacactgtattatatcattttc 7997206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 17925173 - 17925213
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||||||| |||||| ||||||||||||||||||    
T  17925173 gacaccgacacatattattacattgaattatgtgattttct 17925213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 32426870 - 32426910
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||| ||||||||| ||||||||||||||||||    
T  32426870 gacaccgacacaaataattacaatgaattatgtgattttct 32426910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 36838601 - 36838561
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||||||||| |||||||| |||||||    
T  36838601 gacaccgacacatataattacactaaattatgtaattttct 36838561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 41558655 - 41558695
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||| |||||||| |||||||||| |||||||    
T  41558655 gacactgacacatttaattacattgaattatgtcattttct 41558695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 42126311 - 42126351
Alignment:
Q  215 tgtcgtgtctgacactgacacatataattacactgaattat 255  Q
    |||||||| ||||||| ||| ||||||||||||||||||||    
T  42126311 tgtcgtgtttgacactaacatatataattacactgaattat 42126351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 265
Target Start/End: Original strand, 18212973 - 18213074
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||  ||||| ||||||||||| |||| | ||||||||| | | |||||||| ||||| |||||||||||||||||| ||||||||||||||    
T  18212973 ctatgaagcacagacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacacatataattacactaaattatgtgatttt 18213072  T
Q  264 ct 265  Q
    ||    
T  18213073 ct 18213074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 21880271 - 21880170
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| ||||||||||||| ||| |||| || ||||| |||| |||||||||| ||||| ||||| | ||||||||||||||||||| |||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaatttt 21880172  T
Q  264 ct 265  Q
    ||    
T  21880171 ct 21880170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 598327 - 598226
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||| ||||||||||||| ||| |||| |  ||||| ||||||||||||||||||||| ||||| || ||||||| | ||||| ||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgatttt 598228  T
Q  264 ct 265  Q
    ||    
T  598227 ct 598226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 265
Target Start/End: Complemental strand, 5835367 - 5835265
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    ||||| |||||  |||||||||||||| | | |||| |  || |||||||| |||| |||||||||| ||||||||||||||||||||||||||| ||||    
T  5835367 actataaagcaaaaacacttctcggattaagcgtgtcccggtatcagacacatgtcatgtctgacaccgacacatataattacactgaattatgttattt 5835268  T
Q  263 tct 265  Q
    |||    
T  5835267 tct 5835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 262
Target Start/End: Original strand, 18035806 - 18035902
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    ||||||||||| ||||| ||||||| ||  |||||| ||||||||||| ||||| | ||| |||||||||||| ||||||| ||||||||||||||||    
T  18035806 tatgaagcacggacactcctcggattagacgtgttc-cgtgtcagacatgtgtcctatctcacactgacacatgtaattacgctgaattatgtgattt 18035902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 265
Target Start/End: Original strand, 32287404 - 32287504
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttc 264  Q
    ||||||||||| ||||| ||||||| ||| |||| |  ||||| ||||| |||| |||| ||||| |||||||||| || ||||||||||||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttc 32287503  T
Q  265 t 265  Q
    |    
T  32287504 t 32287504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 39138541 - 39138462
Alignment:
Q  186 ggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||| |||| | ||||| ||||| || ||||||| ||||| |||| ||||||||||||||||||||||||||||||    
T  39138541 ggataaggcgtgtccccgtgttagacatgtatcgtgtccgacaccgacatatataattacactgaattatgtgattttct 39138462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 27093373 - 27093454
Alignment:
Q  184 tcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||| ||| |||| || ||||| ||||| |||||||||| |||| ||| |||||||||||||| ||||||||||||||||    
T  27093373 tcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttct 27093454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 27184928 - 27184847
Alignment:
Q  184 tcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||| ||| |||| || ||||| ||||| |||||||||| |||| ||| |||||||||||||| ||||||||||||||||    
T  27184928 tcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttct 27184847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 640182 - 640134
Alignment:
Q  214 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  640182 gtgtcgtatctgacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 15680889 - 15680829
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| ||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||    
T  15680889 gtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgatttt 15680829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 22868111 - 22868060
Alignment:
Q  214 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||| |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  22868111 gtgttgtgtttgatactgacacatataattacactgaattatgtgattttct 22868060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 20549870 - 20549809
Alignment:
Q  204 tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||| |||| |||| ||||| ||||| |||||||||||||||||||||||| ||||||||||    
T  20549870 tgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttct 20549809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 265
Target Start/End: Complemental strand, 22484143 - 22484043
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctcg-tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||| ||||||||||||| ||   ||| |||| |||| |||| ||||| |||||||||| |||||||||||||| |||||||||||  |||||    
T  22484143 tatgaagcacggacacttctcggatcagacatgt-ctcgatgtcggacatgtgtcatgtctgacaccgacacatataattatactgaattatgcaatttt 22484045  T
Q  264 ct 265  Q
    ||    
T  22484044 ct 22484043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 5548734 - 5548694
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  5548734 gacactgacacatataattacactgaattatttgattttct 5548694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 22602711 - 22602751
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  22602711 gacaccgacacatataattacactgaattatgtgattttct 22602751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 23191969 - 23191914
Alignment:
Q  209 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||    
T  23191969 gacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttct 23191914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 26733404 - 26733324
Alignment:
Q  183 ctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||| ||| |||||| ||| || |||| | |||||||| ||||| ||||||| |||||| ||||||||||||||||||    
T  26733404 ctcggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgatttt 26733324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 32308178 - 32308138
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  32308178 gacactgacacatacaattacactgaattatgtgattttct 32308138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 9483003 - 9482952
Alignment:
Q  214 gtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||| ||| ||||| ||||||||||||||||||||||| |||||||||||    
T  9483003 gtgtcgcgtccgacaccgacacatataattacactgaattgtgtgattttct 9482952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 265
Target Start/End: Complemental strand, 17851488 - 17851449
Alignment:
Q  226 acactgacacatataattacactgaattatgtgattttct 265  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  17851488 acacagacacatataattacactgaattatgtgattttct 17851449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 42720830 - 42720929
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||| ||||||| ||| || ||  ||||||  ||||   |||| ||| ||||| |||||||||||||||||||||| | ||||||||||||||    
T  42720830 ctatgaagcacaaacacttatcgaattagacgtgttccggtgttgtacacatgttgtgtcagacactgacacatataattacatttaattatgtgatttt 42720929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 18013075 - 18013113
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  18013075 gacactgacacatataattacactgaattatgtaatttt 18013113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 32093953 - 32094059
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctc-gtgtcagacacgtgtcgtgtc-----tgacactgacacatataattacactgaattatg 256  Q
    ||||||||||||||||||| ||||||| ||| |||| | | ||||| |||||||||||||||      ||||| ||||  | ||||||||||||||||||    
T  32093953 actatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatg 32094052  T
Q  257 tgatttt 263  Q
    |||||||    
T  32094053 tgatttt 32094059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 5409771 - 5409875
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtc-----tgacactgacacatataattacactgaattatgtg 258  Q
    |||||||||||| ||||| ||||||| ||| |||| |  ||||| |||||||||||||||      ||||| ||||| | ||||| ||||||||||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtg 5409870  T
Q  259 atttt 263  Q
    |||||    
T  5409871 atttt 5409875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 33994331 - 33994236
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcg-tgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtga 259  Q
    ||||||| |||||||||| || |||| ||| |||| |||| |||  |||| |||||||||||||||| ||||| | ||||| |||||||||||||||    
T  33994331 ctatgaaacacgaacactccttggattaggcgtgt-ctcggtgttggacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattatgtga 33994236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 2424685 - 2424632
Alignment:
Q  215 tgtcgtgtctgacactgacac---atataattacactgaattatgtgattttct 265  Q
    |||||||| ||||||||||||   | ||||||||||||||||||||||||||||    
T  2424685 tgtcgtgtttgacactgacacgatacataattacactgaattatgtgattttct 2424632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 3721158 - 3721111
Alignment:
Q  218 cgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||| ||||| |||||||||||||| ||| ||||||||||||||||    
T  3721158 cgtgtccgacaccgacacatataattatactaaattatgtgattttct 3721111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 265
Target Start/End: Complemental strand, 12278915 - 12278853
Alignment:
Q  203 gtgtcagacacgtgtcg-tgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||| || | |||| ||||| ||||||||||||||||||||||||||| |||||||    
T  12278915 gtgtcagacacgcgttggtgtccgacac-gacacatataattacactgaattatgtcattttct 12278853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 1401093 - 1401043
Alignment:
Q  215 tgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||| ||||| || || ||||||||||||||||||||||| |||||    
T  1401093 tgtcgtgtcggacaccgatacttataattacactgaattatgtgagtttct 1401043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 4909215 - 4909169
Alignment:
Q  219 gtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||||||||||||| |||||| |||||||||| |||||||    
T  4909215 gtgtccgacactgacacatatgattacaatgaattatgtaattttct 4909169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 27732246 - 27732280
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||||||||||||||||||| |||||||    
T  27732246 gacacatataattacactgaattatgtaattttct 27732280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 15902879 - 15902842
Alignment:
Q  226 acactgacacatataattacactgaattatgtgatttt 263  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  15902879 acaccgacacatataattacactaaattatgtgatttt 15902842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Complemental strand, 17307944 - 17307911
Alignment:
Q  232 acacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||| |||||||    
T  17307944 acacatataattacactgaattatgttattttct 17307911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 24146879 - 24146834
Alignment:
Q  220 tgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    |||| ||||| |||||||||||||| | ||||||||||||||||||    
T  24146879 tgtcagacaccgacacatataattatattgaattatgtgattttct 24146834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 43027404 - 43027469
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacac 229  Q
    |||||||||||| |||||  |||||| ||| |||| |  ||||| |||||||||||||||||||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 7328692 - 7328732
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||||||||| |||||||| |||||||    
T  7328692 gacaccgacacatataattacactaaattatgttattttct 7328732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 265
Target Start/End: Complemental strand, 16341546 - 16341514
Alignment:
Q  233 cacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||| ||||||||||||||||    
T  16341546 cacatataattacacttaattatgtgattttct 16341514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 19206108 - 19206068
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||||| | ||||||||||||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttct 19206068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 19992059 - 19992019
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||| ||||||||||||||| |||||||||||||    
T  19992059 gacaccgacacttataattacactgaaatatgtgattttct 19992019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 21864888 - 21864828
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| ||||||||||||||| ||||  ||||| | |||||||||| |||||| |||||||    
T  21864888 gtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgatttt 21864828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 38143287 - 38143243
Alignment:
Q  219 gtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||  ||||||||||||||| | ||||||||||||||    
T  38143287 gtgtctgacaccaacacatataattacattaaattatgtgatttt 38143243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 167 - 263
Target Start/End: Complemental strand, 70394 - 70298
Alignment:
Q  167 tgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||||||||||||||  |||||| |||  ||| || ||||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttatttt 70298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 403 - 501
Alignment:
Q  165 tatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||| ||||| ||||||| ||| |||| |  ||||| |||||| |||||||| ||||| ||||| | ||||||||||||||| |||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgatttt 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 265
Target Start/End: Complemental strand, 90963 - 90861
Alignment:
Q  163 actatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattt 262  Q
    ||||||||||||  |||||  | |||| ||| ||||| | ||||| ||||||||| ||||||||||  |||| |||||||||||||||||||| ||||||    
T  90963 actatgaagcacatacactcattggattaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgattt 90864  T
Q  263 tct 265  Q
    |||    
T  90863 tct 90861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 45509 - 45563
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgt 257  Q
    ||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||    
T  45509 gtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgt 45563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 23569 - 23531
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  23569 gacactgacacttataattacactgaattatgtgatttt 23531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 23478 - 23440
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  23478 gacaccgacacttataattacactgaattatgtgatttt 23440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 44532 - 44566
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    |||||||||||||||||||||||||||||||||||    
T  44532 gacacatataattacactgaattatgtgattttct 44566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 241724 - 241659
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacac 229  Q
    |||||||||||| ||||||||||||| ||| |||| |  ||||| ||||||||||||||| |||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 241659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 348166 - 348122
Alignment:
Q  219 gtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    |||| |||||| ||||| |||||||||||| ||||||||||||||    
T  348166 gtgtttgacacagacacctataattacacttaattatgtgatttt 348122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 17844 - 17788
Alignment:
Q  209 gacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||||||||||||| |||||||| |||||||| || || |||||||||||    
T  17844 gacacatgtcgtgtctgacaccgacacatacaattacaccgagttgtgtgattttct 17788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 9748 - 9788
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||||||||||||||| ||||||||||    
T  9748 gacaccgacacatataattacactgaattaagtgattttct 9788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 135313 - 135353
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  135313 gacaccgacacatataattacacagaattatgtgattttct 135353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 263373 - 263413
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  263373 gacactgacacttataattacactgaattatgtggttttct 263413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 14607 - 14550
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| ||||||||||||||| |||||   ||| | |||||||||||||||||||||||||    
T  14607 gtgtcggacacgtgtcgtgtccgacac---cacttgtaattacactgaattatgtgatttt 14550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 265
Target Start/End: Complemental strand, 13523 - 13418
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgaca------catataattacactgaattatgtga 259  Q
    |||||||||| ||||| || |||| ||| |||| || ||||||||| ||||||||||| ||||| ||||      | | ||||| |||||||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtga 13424  T
Q  260 ttttct 265  Q
    ||||||    
T  13423 ttttct 13418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 20230 - 20192
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  20230 gacactgacacttgtaattacactgaattatgtgatttt 20192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 265
Target Start/End: Original strand, 21804 - 21909
Alignment:
Q  166 atgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgaca------catataattacactgaattatgtga 259  Q
    |||||||||| ||||| || |||| ||| |||| || ||||||||| ||||||||||| ||||| ||||      | | ||||| |||||||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtga 21903  T
Q  260 ttttct 265  Q
    ||||||    
T  21904 ttttct 21909  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 3850 - 3888
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  3850 gacactgacacttgtaattacactgaattatgtgatttt 3888  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 53232 - 53198
Alignment:
Q  231 gacacatataattacactgaattatgtgattttct 265  Q
    ||||| |||||||||||||||||||||||||||||    
T  53232 gacacttataattacactgaattatgtgattttct 53198  T

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Target: scaffold1528 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 1092 - 1055
Alignment:
Q  226 acactgacacatataattacactgaattatgtgatttt 263  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  1092 acactgacacatatagttacactgaattatgtaatttt 1055  T

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Target: scaffold0475 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 3427 - 3338
Alignment:
Q  164 ctatgaagcacgaacacttctcggataaggagtgttctcgtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaatt 253  Q
    |||||||||||| ||||| ||||||| ||| |||| |  |||||   |||||||| |||| ||||||||||| | |||||||||| ||||    
T  3427 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacacttgtaattacacttaatt 3338  T

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Target: scaffold0623 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 5997 - 6037
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||||||||||||||||| ||| |||||||||||    
T  5997 gacaccgacacatataattacactgcattttgtgattttct 6037  T

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Target: scaffold0236 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 25769 - 25809
Alignment:
Q  225 gacactgacacatataattacactgaattatgtgattttct 265  Q
    ||||| ||||| |||||||||||| ||||||||||||||||    
T  25769 gacaccgacacttataattacactaaattatgtgattttct 25809  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 8878 - 8818
Alignment:
Q  203 gtgtcagacacgtgtcgtgtctgacactgacacatataattacactgaattatgtgatttt 263  Q
    ||||| ||||||||||||||| ||||| ||||| | |||||||||| ||| || |||||||    
T  8878 gtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgatttt 8818  T

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