View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20619_high_52 (Length: 214)

Name: NF20619_high_52
Description: NF20619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20619_high_52
NF20619_high_52
[»] chr8 (25 HSPs)
chr8 (1-54)||(34992261-34992314)
chr8 (1-53)||(41859309-41859361)
chr8 (1-53)||(5034897-5034949)
chr8 (4-53)||(25876520-25876569)
chr8 (1-45)||(37639718-37639762)
chr8 (1-52)||(5035273-5035324)
chr8 (1-52)||(32536708-32536759)
chr8 (4-53)||(61453-61502)
chr8 (3-52)||(27918046-27918095)
chr8 (4-52)||(1365829-1365877)
chr8 (1-52)||(34992015-34992066)
chr8 (15-53)||(44098432-44098470)
chr8 (3-52)||(41092172-41092221)
chr8 (4-52)||(39254787-39254835)
chr8 (3-50)||(41348146-41348193)
chr8 (5-52)||(43924490-43924537)
chr8 (4-45)||(4364046-4364087)
chr8 (4-53)||(7424562-7424611)
chr8 (4-53)||(30272956-30273005)
chr8 (4-53)||(39255752-39255801)
chr8 (4-53)||(44751607-44751656)
chr8 (4-52)||(62240-62288)
chr8 (4-52)||(36936418-36936466)
chr8 (4-52)||(36936697-36936745)
chr8 (4-52)||(42345166-42345214)
[»] chr6 (27 HSPs)
chr6 (1-52)||(3543060-3543111)
chr6 (1-50)||(3542816-3542865)
chr6 (1-53)||(7193337-7193389)
chr6 (1-52)||(33480625-33480676)
chr6 (1-50)||(33479698-33479747)
chr6 (1-52)||(15083315-15083366)
chr6 (1-52)||(22579935-22579986)
chr6 (1-48)||(22582476-22582523)
chr6 (1-48)||(22587307-22587354)
chr6 (1-54)||(33018413-33018466)
chr6 (1-52)||(33018167-33018218)
chr6 (3-52)||(24125972-24126021)
chr6 (1-52)||(24126715-24126766)
chr6 (4-53)||(7159341-7159390)
chr6 (1-53)||(7193575-7193627)
chr6 (4-52)||(7531829-7531877)
chr6 (5-47)||(10607406-10607448)
chr6 (3-45)||(10608319-10608361)
chr6 (4-54)||(14337557-14337607)
chr6 (1-47)||(15082402-15082448)
chr6 (18-52)||(15082638-15082672)
chr6 (18-52)||(22580597-22580631)
chr6 (18-52)||(22587083-22587117)
chr6 (18-52)||(33479938-33479972)
chr6 (4-53)||(7532440-7532489)
chr6 (5-53)||(1035404-1035452)
chr6 (4-52)||(9574571-9574619)
[»] chr2 (22 HSPs)
chr2 (1-52)||(14573261-14573312)
chr2 (1-53)||(21471016-21471068)
chr2 (1-52)||(21471951-21472002)
chr2 (1-53)||(37547997-37548049)
chr2 (1-53)||(38834633-38834685)
chr2 (1-52)||(13134318-13134369)
chr2 (3-52)||(4479701-4479750)
chr2 (1-53)||(14573996-14574048)
chr2 (1-54)||(38834385-38834438)
chr2 (4-52)||(33433160-33433208)
chr2 (4-54)||(5276463-5276513)
chr2 (16-53)||(1164788-1164825)
chr2 (3-52)||(16426553-16426602)
chr2 (3-52)||(40992222-40992271)
chr2 (5-53)||(41984726-41984774)
chr2 (3-54)||(2650227-2650278)
chr2 (3-53)||(24727820-24727870)
chr2 (10-52)||(24741811-24741853)
chr2 (3-53)||(30545434-30545484)
chr2 (4-53)||(4478850-4478899)
chr2 (4-53)||(19521917-19521966)
chr2 (5-54)||(41043329-41043378)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-54)||(157-210)
[»] chr3 (40 HSPs)
chr3 (69-122)||(48715120-48715173)
chr3 (1-53)||(36750434-36750486)
chr3 (1-52)||(19132809-19132860)
chr3 (1-51)||(38922744-38922794)
chr3 (1-54)||(32490192-32490245)
chr3 (1-53)||(41755498-41755550)
chr3 (1-52)||(19132563-19132614)
chr3 (5-52)||(31556217-31556264)
chr3 (1-52)||(32489946-32489997)
chr3 (3-54)||(37105076-37105127)
chr3 (1-52)||(38923662-38923713)
chr3 (1-52)||(45242984-45243035)
chr3 (3-53)||(14667296-14667345)
chr3 (3-52)||(49757181-49757230)
chr3 (3-51)||(42145277-42145325)
chr3 (1-53)||(44687160-44687212)
chr3 (6-52)||(17226968-17227014)
chr3 (1-47)||(36750050-36750096)
chr3 (1-51)||(45242067-45242117)
chr3 (3-53)||(49756274-49756324)
chr3 (1-50)||(3970994-3971043)
chr3 (1-50)||(3998838-3998887)
chr3 (2-55)||(52492277-52492330)
chr3 (1-53)||(41756429-41756481)
chr3 (1-53)||(44686254-44686305)
chr3 (5-52)||(21811879-21811926)
chr3 (5-52)||(31556188-31556235)
chr3 (3-50)||(32994927-32994974)
chr3 (3-54)||(46719659-46719710)
chr3 (3-41)||(37104363-37104401)
chr3 (18-52)||(38923438-38923472)
chr3 (18-52)||(45242307-45242341)
chr3 (18-52)||(52491891-52491925)
chr3 (11-52)||(17227955-17227996)
chr3 (4-53)||(43638078-43638127)
chr3 (4-53)||(49749124-49749173)
chr3 (1-53)||(3971899-3971951)
chr3 (1-53)||(3997927-3997979)
chr3 (5-45)||(38337478-38337518)
chr3 (4-52)||(39901846-39901894)
[»] chr7 (37 HSPs)
chr7 (1-53)||(37468909-37468961)
chr7 (1-53)||(38778853-38778905)
chr7 (1-52)||(668179-668230)
chr7 (1-52)||(17145622-17145673)
chr7 (1-52)||(37469002-37469053)
chr7 (1-52)||(38779560-38779611)
chr7 (3-53)||(41194512-41194562)
chr7 (1-50)||(7677806-7677855)
chr7 (1-53)||(4261593-4261645)
chr7 (1-52)||(669100-669151)
chr7 (1-53)||(37864304-37864356)
chr7 (1-53)||(38071897-38071949)
chr7 (1-52)||(38072288-38072339)
chr7 (3-53)||(29006346-29006396)
chr7 (4-45)||(20890206-20890247)
chr7 (5-54)||(44909360-44909409)
chr7 (5-53)||(45887981-45888029)
chr7 (5-53)||(47331954-47332002)
chr7 (5-52)||(24322352-24322399)
chr7 (3-53)||(29007198-29007248)
chr7 (3-53)||(41224842-41224892)
chr7 (5-53)||(4985395-4985443)
chr7 (5-53)||(4989493-4989541)
chr7 (3-55)||(29314578-29314630)
chr7 (5-45)||(45887286-45887326)
chr7 (1-48)||(4261209-4261256)
chr7 (1-48)||(7677421-7677468)
chr7 (1-52)||(17145869-17145920)
chr7 (5-52)||(41533896-41533943)
chr7 (18-51)||(668420-668453)
chr7 (3-52)||(27599211-27599260)
chr7 (3-52)||(27600094-27600143)
chr7 (4-53)||(29315311-29315360)
chr7 (3-52)||(44896046-44896095)
chr7 (6-47)||(48259820-48259861)
chr7 (5-53)||(24321424-24321472)
chr7 (5-45)||(24322429-24322469)
[»] chr5 (30 HSPs)
chr5 (1-53)||(8204119-8204171)
chr5 (1-53)||(12190155-12190207)
chr5 (1-52)||(15184014-15184065)
chr5 (1-53)||(33002813-33002865)
chr5 (1-53)||(36626627-36626679)
chr5 (1-52)||(686417-686467)
chr5 (5-52)||(39950404-39950451)
chr5 (1-53)||(33001931-33001983)
chr5 (1-53)||(8040194-8040246)
chr5 (1-52)||(15183088-15183140)
chr5 (5-53)||(33284024-33284072)
chr5 (5-52)||(2319266-2319313)
chr5 (3-46)||(4607470-4607513)
chr5 (1-51)||(687345-687395)
chr5 (3-53)||(8040443-8040493)
chr5 (3-52)||(4608589-4608638)
chr5 (4-53)||(13654932-13654981)
chr5 (5-53)||(2319968-2320016)
chr5 (4-52)||(16971033-16971081)
chr5 (5-53)||(26268343-26268391)
chr5 (16-52)||(39950444-39950480)
chr5 (2-53)||(13404701-13404752)
chr5 (5-52)||(26269022-26269069)
chr5 (18-52)||(686667-686701)
chr5 (3-53)||(2458353-2458403)
chr5 (4-53)||(8226641-8226690)
chr5 (3-52)||(31148444-31148493)
chr5 (6-47)||(39167442-39167483)
chr5 (4-52)||(26688166-26688214)
chr5 (4-52)||(26957897-26957945)
[»] chr4 (59 HSPs)
chr4 (1-53)||(11417686-11417738)
chr4 (1-53)||(26611280-26611332)
chr4 (1-53)||(29651329-29651381)
chr4 (1-54)||(31836457-31836510)
chr4 (1-53)||(10425056-10425108)
chr4 (1-52)||(10424123-10424174)
chr4 (1-52)||(11417934-11417985)
chr4 (1-52)||(36865714-36865765)
chr4 (1-52)||(38694951-38695002)
chr4 (1-52)||(39523268-39523319)
chr4 (3-54)||(47377597-47377648)
chr4 (3-52)||(45235959-45236008)
chr4 (1-53)||(21166372-21166424)
chr4 (4-47)||(3847891-3847934)
chr4 (1-52)||(45230365-45230416)
chr4 (2-48)||(38143735-38143781)
chr4 (4-54)||(47198603-47198653)
chr4 (4-53)||(42544487-42544536)
chr4 (1-53)||(9939368-9939420)
chr4 (4-47)||(3848578-3848621)
chr4 (1-52)||(21165447-21165498)
chr4 (1-52)||(38694702-38694753)
chr4 (1-52)||(47376852-47376903)
chr4 (3-45)||(11680283-11680325)
chr4 (3-45)||(11688562-11688604)
chr4 (5-47)||(25370511-25370553)
chr4 (1-47)||(26610350-26610396)
chr4 (3-53)||(28684231-28684281)
chr4 (1-51)||(36864818-36864868)
chr4 (3-52)||(30808621-30808670)
chr4 (3-52)||(37275088-37275137)
chr4 (5-54)||(46765169-46765218)
chr4 (4-53)||(52757812-52757861)
chr4 (4-52)||(25371545-25371593)
chr4 (1-53)||(39522374-39522426)
chr4 (5-52)||(38014923-38014970)
chr4 (4-55)||(55159177-55159228)
chr4 (18-52)||(10424385-10424419)
chr4 (3-45)||(12590202-12590244)
chr4 (18-52)||(21166137-21166171)
chr4 (3-53)||(23425206-23425256)
chr4 (3-45)||(25655638-25655680)
chr4 (1-51)||(29650416-29650466)
chr4 (18-52)||(29650655-29650689)
chr4 (18-52)||(31836221-31836255)
chr4 (3-53)||(31910553-31910603)
chr4 (18-52)||(45235733-45235767)
chr4 (1-38)||(25970120-25970157)
chr4 (4-53)||(30478308-30478357)
chr4 (3-52)||(42545562-42545611)
chr4 (4-53)||(47199395-47199444)
chr4 (4-53)||(48013316-48013365)
chr4 (4-53)||(55160067-55160115)
chr4 (5-53)||(11681275-11681323)
chr4 (5-53)||(11689554-11689602)
chr4 (5-53)||(12589286-12589334)
chr4 (3-35)||(23383327-23383359)
chr4 (8-52)||(23865321-23865365)
chr4 (3-51)||(52758709-52758757)
[»] chr1 (35 HSPs)
chr1 (1-53)||(51974436-51974488)
chr1 (1-52)||(16270207-16270258)
chr1 (1-52)||(23440862-23440913)
chr1 (1-53)||(43737975-43738027)
chr1 (1-53)||(48972442-48972494)
chr1 (1-52)||(9948884-9948935)
chr1 (1-52)||(43737729-43737780)
chr1 (3-53)||(1012546-1012596)
chr1 (3-52)||(193850-193899)
chr1 (1-52)||(50827088-50827138)
chr1 (4-53)||(51987826-51987875)
chr1 (1-52)||(9947995-9948046)
chr1 (1-52)||(16271145-16271196)
chr1 (1-52)||(23440617-23440668)
chr1 (1-52)||(48971705-48971756)
chr1 (1-52)||(51975224-51975275)
chr1 (4-53)||(35616775-35616824)
chr1 (1-50)||(38931244-38931293)
chr1 (4-53)||(45064685-45064734)
chr1 (6-51)||(49611562-49611607)
chr1 (4-52)||(8560839-8560887)
chr1 (4-52)||(49610706-49610754)
chr1 (4-52)||(51988464-51988512)
chr1 (1-52)||(38930312-38930363)
chr1 (3-53)||(1013471-1013521)
chr1 (18-52)||(16270901-16270935)
chr1 (18-52)||(38930574-38930608)
chr1 (3-53)||(45065385-45065435)
chr1 (4-46)||(48870753-48870795)
chr1 (4-52)||(194701-194749)
chr1 (5-53)||(8561737-8561785)
chr1 (5-45)||(14924681-14924721)
chr1 (5-45)||(14925343-14925383)
chr1 (4-52)||(37874064-37874112)
chr1 (6-54)||(48869767-48869815)
[»] scaffold0041 (2 HSPs)
scaffold0041 (1-52)||(27572-27623)
scaffold0041 (1-52)||(27221-27272)
[»] scaffold0155 (1 HSPs)
scaffold0155 (3-52)||(17339-17388)
[»] scaffold0332 (1 HSPs)
scaffold0332 (3-52)||(9257-9306)


Alignment Details
Target: chr8 (Bit Score: 54; Significance: 3e-22; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34992261 - 34992314
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34992261 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 34992314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 41859361 - 41859309
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41859361 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 41859309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5034949 - 5034897
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  5034949 tcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 5034897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 25876569 - 25876520
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  25876569 actttcccatggtgggaaaaaaatcttctttcccaaattaaatggcacct 25876520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37639762 - 37639718
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  37639762 tcaactttcccatggtgggaaagaactctcctttcccaaattaaa 37639718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5035273 - 5035324
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||||||||||    
T  5035273 tcaactttcctatggtggaaaagaactctcctttcccaaattaaatggcacc 5035324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 32536759 - 32536708
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  32536759 tcaactttcccatggtgggaaagaactctcatttcctaaattaaatggcacc 32536708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 61502 - 61453
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  61502 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacct 61453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 27918046 - 27918095
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  27918046 aactttcccatggtgggaaaaaagtctcatttcccaaattaaacggcacc 27918095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 1365877 - 1365829
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||    
T  1365877 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacc 1365829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 34992066 - 34992015
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||| ||||||||| ||| ||||||| |||||||||||||||||||||    
T  34992066 tcaacttttccatggtggaaaataactctcgtttcccaaattaaatggcacc 34992015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 44098432 - 44098470
Alignment:
Q  15 gtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  44098432 gtgggaaagaactctcctttcccaaattaaatggcacct 44098470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 41092221 - 41092172
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||| |||||||||||||||||   |||||||||||||||||||||||    
T  41092221 aacttttccatggtgggaaaaaacaagcctttcccaaattaaatggcacc 41092172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 39254835 - 39254787
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||| ||||||||||| || ||||||||||||||||||||| ||||    
T  39254835 actttcctatggtgggaaagaagtctcctttcccaaattaaatgccacc 39254787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 41348193 - 41348146
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 50  Q
    ||||||||||||||||| |||||||  |||||||||||||||| ||||    
T  41348193 aactttcccatggtggggaaaaactaacctttcccaaattaaacggca 41348146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 43924537 - 43924490
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||| ||||  |||||||||||||||||| ||||    
T  43924537 ctttcccatggtgggaaacaacttccctttcccaaattaaatgccacc 43924490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 4364087 - 4364046
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaa 45  Q
    ||||||||||| |||||||||| | |||||||||||||||||    
T  4364087 actttcccatgatgggaaaaaagtttcctttcccaaattaaa 4364046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 7424562 - 7424611
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||||||| |||||| ||| ||||| |||||||||| ||||||    
T  7424562 actttcccatggtggaaaaaaagtcttctttctcaaattaaattgcacct 7424611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 30272956 - 30273005
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||| |||||||||| | | ||||||||||||||| |||||||    
T  30272956 actttcccatgatgggaaaaaagtttgctttcccaaattaaacggcacct 30273005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 39255752 - 39255801
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||||||||||| || |||| |||||||| ||||||| |||||    
T  39255752 actttcccatggtgggaaagaagtctcatttcccaagttaaatgccacct 39255801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 44751656 - 44751607
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||| ||||||| || ||||||||||||| ||||||| |||||    
T  44751656 actttcccatgatgggaaagaagtctcctttcccaagttaaatgccacct 44751607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 62240 - 62288
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||| ||||||||||| || ||||||||| ||||||||||| ||||    
T  62240 actttcctatggtgggaaagaagtctcctttctcaaattaaatgtcacc 62288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 36936418 - 36936466
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||| |||||||||| | | ||||||||||||||| ||||||    
T  36936418 actttcccatgatgggaaaaaagtttgctttcccaaattaaacggcacc 36936466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 36936697 - 36936745
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||| |||||||||| | | ||||||||||||||| ||||||    
T  36936697 actttcccatgatgggaaaaaagtttgctttcccaaattaaacggcacc 36936745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 42345214 - 42345166
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  42345214 actttcccatgatgggaaagaagtttactttcccaaattaaatggcacc 42345166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 5e-21; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3543060 - 3543111
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3543060 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 3543111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3542865 - 3542816
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 50  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3542865 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 3542816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7193389 - 7193337
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7193389 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 7193337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 33480625 - 33480676
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33480625 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 33480676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33479747 - 33479698
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 50  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33479747 tcaactttcccatggtgggaaataactctcctttcccaaattaaatggca 33479698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 15083315 - 15083366
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  15083315 tcaactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 15083366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22579986 - 22579935
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  22579986 tcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 22579935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22582476 - 22582523
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgg 48  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  22582476 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatgg 22582523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22587307 - 22587354
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgg 48  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  22587307 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatgg 22587354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33018413 - 33018466
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  33018413 tcaactttcccatggtgggaaagaactctcctttcccaaattaaacgacacctc 33018466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33018218 - 33018167
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  33018218 tcaactttccaatgatgggaaagaactctcctttcccaaattaaatggcacc 33018167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 24126021 - 24125972
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||||    
T  24126021 aactttcccatggtgggaaacaactcccctttcccaaattaaatgccacc 24125972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24126715 - 24126766
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||| ||||    
T  24126715 tcaactttcccatgatgggaaacaactcccctttcccaaattaaatgccacc 24126766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 7159341 - 7159390
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||| |||||||||| | | |||||||||||||||||||||||    
T  7159341 actttcccatgatgggaaaaaagtttgctttcccaaattaaatggcacct 7159390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7193575 - 7193627
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||| ||| ||| |||||| ||||| |||||||||||||||||    
T  7193575 tcaactttcccatgatggaaaagaactctactttctcaaattaaatggcacct 7193627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 7531877 - 7531829
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||| ||||| || ||||||||||||||||||||| ||||    
T  7531877 actttcccatggtaggaaagaagtctcctttcccaaattaaatgccacc 7531829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 10607448 - 10607406
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatg 47  Q
    |||||||||||||||||||||||   |||||||||||||||||    
T  10607448 ctttcccatggtgggaaaaaactagtctttcccaaattaaatg 10607406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 10608319 - 10608361
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 45  Q
    ||||||||||||||||||||||||   ||||||||||||||||    
T  10608319 aactttcccatggtgggaaaaaaccagcctttcccaaattaaa 10608361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 14337557 - 14337607
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||||    
T  14337557 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacctc 14337607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15082448 - 15082402
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatg 47  Q
    |||||||||||||| ||| ||| ||||||| ||||||||||||||||    
T  15082448 tcaactttcccatgatggaaaagaactctcatttcccaaattaaatg 15082402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 15082638 - 15082672
Alignment:
Q  18 ggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||| |||||||||||||||||||||||||||||    
T  15082638 ggaaagaactctcctttcccaaattaaatggcacc 15082672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 22580631 - 22580597
Alignment:
Q  18 ggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||| |||||||||||||||||||||||||||||    
T  22580631 ggaaagaactctcctttcccaaattaaatggcacc 22580597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 22587117 - 22587083
Alignment:
Q  18 ggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||| |||||||||||||||||||||||||||||    
T  22587117 ggaaagaactctcctttcccaaattaaatggcacc 22587083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 33479938 - 33479972
Alignment:
Q  18 ggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||| |||||||||||||||||||||||||||||    
T  33479938 ggaaagaactctcctttcccaaattaaatggcacc 33479972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 7532440 - 7532489
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||||||  ||| || ||||||||||||||||||||| |||||    
T  7532440 actttcccatggtgaaaaagaagtctcctttcccaaattaaatgccacct 7532489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 1035404 - 1035452
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||| |||||||||| |  ||||| ||||||||||||||||||    
T  1035404 ctttcccatgatgggaaaaaattaaccttttccaaattaaatggcacct 1035452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 9574571 - 9574619
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||| ||||||||||| || ||||||||||||| ||||||| ||||    
T  9574571 actttcctatggtgggaaagaagtctcctttcccaagttaaatgccacc 9574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 5e-21; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14573312 - 14573261
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14573312 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 14573261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21471068 - 21471016
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21471068 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 21471016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21471951 - 21472002
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21471951 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 21472002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 37548049 - 37547997
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  37548049 tcaactttcccatgatgggaaagaactctcctttcccaaattaaatggcacct 37547997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38834633 - 38834685
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  38834633 tcaactttcccacggtaggaaaaaactctcctttcccaaattaaatggcacct 38834685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13134369 - 13134318
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  13134369 tcaactttcctatggtgggaaagaactctcctttcccaaattaaatggcacc 13134318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 4479701 - 4479750
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  4479701 aactttcccatggtgagaaagaactctcctttcccaaattaaatggcacc 4479750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14573996 - 14574048
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||||||||||    
T  14573996 tcaactttcttatggtgggaaagaactctcctttcccaaattaaatggcacct 14574048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38834438 - 38834385
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    ||||||||||| ||||||||||  || |||||||||||||||||||||||||||    
T  38834438 tcaactttcccgtggtgggaaagtaccctcctttcccaaattaaatggcacctc 38834385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 33433160 - 33433208
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  33433160 actttcccatggtgggaaagaactctcctttctcaaattaaacggcacc 33433208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 5276513 - 5276463
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    ||||||||||||||||||| || ||||||||||||| ||||||| ||||||    
T  5276513 actttcccatggtgggaaagaagtctcctttcccaagttaaatgccacctc 5276463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 1164788 - 1164825
Alignment:
Q  16 tgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  1164788 tgggaaagaactctcctttcccaaattaaatggcacct 1164825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 16426602 - 16426553
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||| |||||||||||||||||   |||||||||||||||||||||||    
T  16426602 aacttttccatggtgggaaaaaacaagcctttcccaaattaaatggcacc 16426553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 40992271 - 40992222
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||| |||||||||   |||||||||||||||||||||||    
T  40992271 aactttcccatggtaggaaaaaacaaacctttcccaaattaaatggcacc 40992222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 41984774 - 41984726
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||||| |||||||||  |||||||||||||||||| |||||    
T  41984774 ctttcccatggtgagaaaaaactagcctttcccaaattaaatgccacct 41984726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 2650278 - 2650227
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    |||||| ||||| |||||||||| |||| |||||||||||||| ||||||||    
T  2650278 aacttttccatgatgggaaaaaagtctcatttcccaaattaaacggcacctc 2650227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 24727870 - 24727820
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||| ||||| |||||||||| | | |||||||||||||||||||||||    
T  24727870 aacttttccatgatgggaaaaaagtgtgctttcccaaattaaatggcacct 24727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 24741811 - 24741853
Alignment:
Q  10 ccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||    
T  24741811 ccatggtgggaaaaaagtcttctttcccaaattaaacggcacc 24741853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 30545434 - 30545484
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||  ||||||| ||||  ||||||||||||||||||||||||    
T  30545434 aactttcccatcatgggaaacaacttccctttcccaaattaaatggcacct 30545484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 4478899 - 4478850
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  4478899 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 4478850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 19521917 - 19521966
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  19521917 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 19521966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 41043329 - 41043378
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    |||| ||||| ||||||||||||  |||||||||||||||||| ||||||    
T  41043329 cttttccatgatgggaaaaaactagcctttcccaaattaaatgccacctc 41043378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 157 - 210
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  157 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacctc 210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 8e-20; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 48715120 - 48715173
Alignment:
Q  69 tcatttatccgtgaactgaaactcattcatatttatcacaattattaaggaaaa 122  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48715120 tcattcatccgtgaactgaaactcattcatatttatcacaattattaaggaaaa 48715173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36750434 - 36750486
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36750434 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 36750486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19132809 - 19132860
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  19132809 tcaactttcccatggtgggaaagaactttcctttcccaaattaaatggcacc 19132860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38922794 - 38922744
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 51  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  38922794 tcaactttcccatggtaggaaataactctcctttcccaaattaaatggcac 38922744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32490192 - 32490245
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| |||||    
T  32490192 tcaacttttccatggtgggaaagaactctcctttcccaaattaaatggtacctc 32490245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 41755550 - 41755498
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| |||||    
T  41755550 tcaattttctcatggtgggaaaaaactctcctttcccaaattaaatgacacct 41755498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 19132614 - 19132563
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||| || ||||| |||||||||||||||||||||||||||||    
T  19132614 tcaactttcccatagtaggaaagaactctcctttcccaaattaaatggcacc 19132563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 31556217 - 31556264
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  31556217 ctttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 31556264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 32489997 - 32489946
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  32489997 tcaactttcccatggtggaaaagaattctcctttcccaaattaaatggcacc 32489946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 37105076 - 37105127
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  37105076 aactttcccatggtgggaaaaaagtctcgtttcccaaattaaacggcacctc 37105127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38923662 - 38923713
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||||||||||    
T  38923662 tcaacttttccatggtgggaaagaactctcatttcccaaattaaatggcacc 38923713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 45242984 - 45243035
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  45242984 tcaactttcccatggtggaaaagaactcttctttcccaaattaaatggcacc 45243035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 14667345 - 14667296
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  14667345 aactttcccatggtgggaaaaaa-tctcctttcccaaattaaacggcacct 14667296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 49757181 - 49757230
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  49757181 aactttcccatggtaggaaaaaagtctcctttcccaaattaaacggcacc 49757230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 42145277 - 42145325
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 51  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  42145277 aactttcctatggtggaaaaaaagtctcctttcccaaattaaatggcac 42145325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 44687160 - 44687212
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||| ||||||||| ||| || |||||||||||||||||||||||||||    
T  44687160 tcaacttttccatggtggaaaagaattctcctttcccaaattaaatggcacct 44687212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 17227014 - 17226968
Alignment:
Q  6 tttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||    
T  17227014 tttcccatggtgggaaagaaatctcctttcccaaattaaatgccacc 17226968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36750096 - 36750050
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatg 47  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  36750096 tcaacttttccatggtggaaaagaactctcctttcccaaattaaatg 36750050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 45242117 - 45242067
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 51  Q
    |||||||||||||| ||| ||| ||||||| ||||||||||||||||||||    
T  45242117 tcaactttcccatgatggaaaagaactctcatttcccaaattaaatggcac 45242067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 49756324 - 49756274
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||| |||  |||||| ||||||||||||||||||    
T  49756324 aactttcccatggtgggaaataacattccttttccaaattaaatggcacct 49756274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3971043 - 3970994
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 50  Q
    |||||||| ||||||||  ||||||||||| |||||||||||||||||||    
T  3971043 tcaacttttccatggtgaaaaaaaactctcatttcccaaattaaatggca 3970994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3998838 - 3998887
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 50  Q
    |||||||| ||||||||  ||||||||||| |||||||||||||||||||    
T  3998838 tcaacttttccatggtgaaaaaaaactctcatttcccaaattaaatggca 3998887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 52492277 - 52492330
Alignment:
Q  2 caactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctcc 55  Q
    ||||||| ||||||||| ||| ||||||| |||||||||||||||| |||||||    
T  52492277 caacttttccatggtggaaaagaactctcatttcccaaattaaatgacacctcc 52492330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41756429 - 41756481
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||| ||||||| ||||||||||||| || ||||||| |||||    
T  41756429 tcaactttcccatgatgggaaagaactctcctttcctaacttaaatgacacct 41756481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 44686305 - 44686254
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||| |||||||  ||||||||||||||| ||||||||||||||||||    
T  44686305 tcaactttctcatggtga-aaaaaactctccttttccaaattaaatggcacct 44686254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 21811926 - 21811879
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||||    
T  21811926 ctttcccatggtaggaaaaaagtctcatttcccaaattaaacggcacc 21811879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 31556235 - 31556188
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||  ||||||| ||||||||||| |||||||||||||||||    
T  31556235 ctttcccatcatgggaaagaactctccttttccaaattaaatggcacc 31556188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 32994974 - 32994927
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 50  Q
    |||||||||||| |||||||||| | | ||||||||||||||||||||    
T  32994974 aactttcccatgatgggaaaaaaatgtgctttcccaaattaaatggca 32994927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 46719710 - 46719659
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    |||||||||||| || |||||||||  | |||||||||||||||||||||||    
T  46719710 aactttcccatgatgagaaaaaactagcatttcccaaattaaatggcacctc 46719659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 37104401 - 37104363
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaat 41  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  37104401 aactttcccatggtggaaaaaaagtctcctttcccaaat 37104363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 38923472 - 38923438
Alignment:
Q  18 ggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||| |||||||||||||||||||||||||||||    
T  38923472 ggaaagaactctcctttcccaaattaaatggcacc 38923438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 45242307 - 45242341
Alignment:
Q  18 ggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||| |||||||||||||||||||||||||||||    
T  45242307 ggaaagaactctcctttcccaaattaaatggcacc 45242341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 52491925 - 52491891
Alignment:
Q  18 ggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||| |||||||||||||||||||||||||||||    
T  52491925 ggaaagaactctcctttcccaaattaaatggcacc 52491891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 17227955 - 17227996
Alignment:
Q  11 catggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||| || ||||||||||||||||||||| ||||    
T  17227955 catggtgggaaagaagtctcctttcccaaattaaatgccacc 17227996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 43638078 - 43638127
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  43638078 actttcccatgatgggaaagaagtttactttcccaaattaaatggcacct 43638127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 49749173 - 49749124
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||| ||| |||||||||| | ||||||||||| |||||||||||||    
T  49749173 actttcctatgatgggaaaaaaatttcctttcccaagttaaatggcacct 49749124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3971899 - 3971951
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||  ||||||| |||| || ||||| ||||||||||||||||    
T  3971899 tcaactttcccatcatgggaaagaactttcatttcctaaattaaatggcacct 3971951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3997979 - 3997927
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||  ||||||| |||| || ||||| ||||||||||||||||    
T  3997979 tcaactttcccatcatgggaaagaactttcatttcctaaattaaatggcacct 3997927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 38337478 - 38337518
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 45  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  38337478 ctttcccatggtgggaaacaacttccctttcccaaattaaa 38337518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 39901894 - 39901846
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||||||||| ||||||| |||||||  ||||| ||||||    
T  39901894 actttcccatggtgggaaagaactctcatttcccaggttaaacggcacc 39901846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 3e-19; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 37468961 - 37468909
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37468961 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 37468909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38778905 - 38778853
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38778905 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 38778853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 668230 - 668179
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  668230 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 668179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17145673 - 17145622
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17145673 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 17145622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37469002 - 37469053
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37469002 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 37469053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38779560 - 38779611
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  38779560 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 38779611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 41194562 - 41194512
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41194562 aactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 41194512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7677806 - 7677855
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 50  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7677806 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggca 7677855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4261593 - 4261645
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  4261593 tcaactttcccatggtgggaaagaactctcctttcctaaattaaatggcacct 4261645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 669100 - 669151
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  669100 tcaactttcctatggtgggaaaaaactctcatttcccaaattaaatggcacc 669151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37864304 - 37864356
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  37864304 tcaactttcccatggtgggaaagaactcttatttcccaaattaaatggcacct 37864356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38071949 - 38071897
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  38071949 tcaactttcccatgatgggaaagaactctcctttcctaaattaaatggcacct 38071897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38072288 - 38072339
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  38072288 tcaactttcccatggtggaaaagaactctcatttcccaaattaaatggcacc 38072339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 29006396 - 29006346
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  29006396 aactttcccatggtgggaaaaaacaagcctttcccaaattaaatggcacct 29006346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 20890247 - 20890206
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaa 45  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  20890247 actttcccatggtgggaaaaaactgtcctttcccaaattaaa 20890206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 44909360 - 44909409
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||    
T  44909360 ctttcccatggtgggaaaaaacttacctttcccaaattaaacggcacctc 44909409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 45887981 - 45888029
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||    
T  45887981 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgccacct 45888029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 47331954 - 47332002
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||    
T  47331954 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgtcacct 47332002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 24322352 - 24322399
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||    
T  24322352 ctttcccatggtgggataaaactaacctttcccaaattaaatggcacc 24322399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 29007198 - 29007248
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||||||||||||||||   |||||||||||||||||| |||||    
T  29007198 aactttcccatggtgggaaaaaacaagcctttcccaaattaaatgacacct 29007248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 41224842 - 41224892
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||||    
T  41224842 aactttcccatggtgggaaaaaataagcctttcccaaattaaatggcacct 41224892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 4985395 - 4985443
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||||  | |||||||||||||||| |||||    
T  4985395 ctttcccatggtgggaaaaaactagcatttcccaaattaaatgtcacct 4985443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 4989493 - 4989541
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||||  | |||||||||||||||| |||||    
T  4989493 ctttcccatggtgggaaaaaactagcatttcccaaattaaatgtcacct 4989541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 29314630 - 29314578
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctcc 55  Q
    |||||||||||||||| |||||||   |||||| |||||||||||||||||||    
T  29314630 aactttcccatggtggaaaaaaacaagcctttctcaaattaaatggcacctcc 29314578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 45887326 - 45887286
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  45887326 ctttcccatggtgggaaaaaactagcctttcccaaattaaa 45887286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4261256 - 4261209
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgg 48  Q
    |||||||||||||||| | ||| ||||||||||||| |||||||||||    
T  4261256 tcaactttcccatggtagaaaagaactctcctttcctaaattaaatgg 4261209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7677468 - 7677421
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgg 48  Q
    ||||||||  |||||||||||| || ||||||||||||||||||||||    
T  7677468 tcaactttttcatggtgggaaagaattctcctttcccaaattaaatgg 7677421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17145869 - 17145920
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||| ||   ||| |||||||||||||||||||||||||||||    
T  17145869 tcaactttcccatagtaaaaaagaactctcctttcccaaattaaatggcacc 17145920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 41533943 - 41533896
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||| ||||||||  |||||||||||||||| ||||||    
T  41533943 ctttcccatggtggaaaaaaacttacctttcccaaattaaacggcacc 41533896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 668420 - 668453
Alignment:
Q  18 ggaaaaaactctcctttcccaaattaaatggcac 51  Q
    ||||| ||||||||||||||||||||||||||||    
T  668420 ggaaagaactctcctttcccaaattaaatggcac 668453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 27599260 - 27599211
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||| ||||| |||||||||  ||||||| ||||    
T  27599260 aactttcccatggtgggaaacaactcccctttcccattttaaatgccacc 27599211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 27600094 - 27600143
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||| ||||| |||||||||  ||||||| ||||    
T  27600094 aactttcccatggtgggaaacaactcccctttcccattttaaatgccacc 27600143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 29315311 - 29315360
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||| ||||||||||||   |||||||||||||||| ||||||    
T  29315311 actttcccatgatgggaaaaaactagtctttcccaaattaaattgcacct 29315360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 44896095 - 44896046
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||||||| |||||||   ||||||||||||||| ||||||    
T  44896095 aactttcccatggtggggaaaaactagtctttcccaaattaaacggcacc 44896046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 48259820 - 48259861
Alignment:
Q  6 tttcccatggtgggaaaaaactctcctttcccaaattaaatg 47  Q
    ||||||||||||||||||||||  | ||||||||||||||||    
T  48259820 tttcccatggtgggaaaaaactaacatttcccaaattaaatg 48259861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 24321472 - 24321424
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||| ||| ||||| ||||||  ||||||||||||||||||||||||    
T  24321472 ctttcctatgatgggataaaactaacctttcccaaattaaatggcacct 24321424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 24322469 - 24322429
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 45  Q
    |||||||||| |||||||||| | |||||||||||||||||    
T  24322469 ctttcccatgatgggaaaaaagtttcctttcccaaattaaa 24322429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 3e-19; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8204171 - 8204119
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8204171 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 8204119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12190155 - 12190207
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12190155 tcaactttcccatggtgggaaaaaactctcttttcccaaattaaatggcacct 12190207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 15184014 - 15184065
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15184014 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 15184065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33002813 - 33002865
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  33002813 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatgacacct 33002865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36626627 - 36626679
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  36626627 tcaactttcccatggtgggaaagaactctcatttcccaaattaaatggcacct 36626679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 686467 - 686417
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  686467 tcaactttcccatggtgggaaaaa-ctctcctttcccaaattaaatggcacc 686417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 39950451 - 39950404
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  39950451 ctttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 39950404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33001983 - 33001931
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  33001983 tcaacttttccatggtgggaaagaactctcctttcccaaattaaatggtacct 33001931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8040246 - 8040194
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||| | ||||||| |||| |||||||||||||||||||||||||    
T  8040246 tcaactttcccacgatgggaaagaactgtcctttcccaaattaaatggcacct 8040194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15183140 - 15183088
Alignment:
Q  1 tcaactttcccatggtgggaaa-aaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  15183140 tcaactttctcatgatgggaaataaactctcctttcccaaattaaatggcacc 15183088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 33284024 - 33284072
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  33284024 ctttcccatggtgggataaaactaacctttcccaaattaaatggcacct 33284072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 2319313 - 2319266
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||    
T  2319313 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgccacc 2319266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 4607513 - 4607470
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaat 46  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||    
T  4607513 aactttcccatggtgggaaaaaagtctactttcccaaattaaat 4607470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 687345 - 687395
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 51  Q
    |||||||| |||| |||| ||| ||||||||||||||||||||||||||||    
T  687345 tcaacttttccatagtggaaaagaactctcctttcccaaattaaatggcac 687395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 8040443 - 8040493
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||| ||||||||| || | |||||||||||||||||||||||||    
T  8040443 aactttcccacggtgggaaagaaatttcctttcccaaattaaatggcacct 8040493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 4608589 - 4608638
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||| |||  |||||||||| |||||||||||||    
T  4608589 aactttcccatggtgggaaataacattcctttcccagattaaatggcacc 4608638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 13654981 - 13654932
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||| ||||||||||| || ||||||||||||||||||||| |||||    
T  13654981 actttcctatggtgggaaagaagtctcctttcccaaattaaatgtcacct 13654932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 2319968 - 2320016
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||| ||||||||||||||||  |||||||||||||||||| |||||    
T  2319968 ctttcctatggtgggaaaaaactagcctttcccaaattaaatgccacct 2320016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 16971033 - 16971081
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||| ||||||||||||   ||||||||||||||||||||||    
T  16971033 actttcccatgatgggaaaaaactagtctttcccaaattaaatggcacc 16971081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 26268391 - 26268343
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||||  | |||||||||||||||| |||||    
T  26268391 ctttcccatggtgggaaaaaactaacatttcccaaattaaatgccacct 26268343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 39950444 - 39950480
Alignment:
Q  16 tgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||| |||||||||||||||||||||||||||||    
T  39950444 tgggaaagaactctcctttcccaaattaaatggcacc 39950480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 13404701 - 13404752
Alignment:
Q  2 caactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||||||||||||||||   ||| ||||||||||||||| |||||    
T  13404701 caactttcccatggtgggaaaaaagagtccgttcccaaattaaatgccacct 13404752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 26269022 - 26269069
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||| ||||||||||||  |||||||||||||||||| ||||    
T  26269022 ctttcccatgatgggaaaaaactaacctttcccaaattaaatgccacc 26269069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 686667 - 686701
Alignment:
Q  18 ggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||| |||||||||||||||||||||||||||||    
T  686667 ggaaagaactctcctttcccaaattaaatggcacc 686701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 2458353 - 2458403
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||| ||||||||| |||||| |||| |||||||||||||| |||||||    
T  2458353 aacttttccatggtggaaaaaaagtctcatttcccaaattaaacggcacct 2458403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 8226690 - 8226641
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||| |||||| ||||||||| ||| ||||| |||||||||||||||||    
T  8226690 acttttccatggagggaaaaaattcttctttctcaaattaaatggcacct 8226641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 31148444 - 31148493
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||| |||||||||| | | ||||||||||||||| ||||||    
T  31148444 aactttcccatgatgggaaaaaagtgtgctttcccaaattaaacggcacc 31148493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 39167442 - 39167483
Alignment:
Q  6 tttcccatggtgggaaaaaactctcctttcccaaattaaatg 47  Q
    ||||||||| ||||||| || |||||||||||||||||||||    
T  39167442 tttcccatgatgggaaagaagtctcctttcccaaattaaatg 39167483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 26688214 - 26688166
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  26688214 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 26688166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 26957945 - 26957897
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  26957945 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 26957897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 3e-19; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11417738 - 11417686
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11417738 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 11417686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26611280 - 26611332
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26611280 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgacacct 26611332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29651329 - 29651381
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29651329 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 29651381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31836457 - 31836510
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  31836457 tcaactttcccatggtgggaaagaactctcctttctcaaattaaatggcacctc 31836510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10425056 - 10425108
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  10425056 tcaactttcccatggtgggaaagaactctcctttcctaaattaaatggcacct 10425108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10424174 - 10424123
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  10424174 tcaactttcctatggtgggaaagaactctcctttcccaaattaaatggcacc 10424123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11417934 - 11417985
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  11417934 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatgacacc 11417985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 36865714 - 36865765
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  36865714 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatgtcacc 36865765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38694951 - 38695002
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  38694951 tcaactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 38695002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 39523268 - 39523319
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  39523268 tcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 39523319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 47377597 - 47377648
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  47377597 aactttcccatggtgggaaacaactcccctttcccaaattaaatggcacctc 47377648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 45235959 - 45236008
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  45235959 aactttcccatggtgggaaagaactctccttttccaaattaaatggcacc 45236008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21166372 - 21166424
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||| ||||||| |||||||||||| |||||||||||||||||    
T  21166372 tcaactttcccatgatgggaaagaactctcctttctcaaattaaatggcacct 21166424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 3847934 - 3847891
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatg 47  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  3847934 actttcccatggtgggaaaaaagtctcctttcccaaattaaatg 3847891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 45230416 - 45230365
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  45230416 tcaactttcccatggtgggaaagaactctcttttcccgaattaaatggcacc 45230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 38143735 - 38143781
Alignment:
Q  2 caactttcccatggtgggaaaaaactctcctttcccaaattaaatgg 48  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  38143735 caactttcccatggtgggaaagaactctcatttcccaaattaaatgg 38143781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 47198653 - 47198603
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  47198653 actttcccatggtgggaaagaagtctcctttcccaaattaaatgtcacctc 47198603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 42544536 - 42544487
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  42544536 acttttccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 42544487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9939368 - 9939420
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||| ||||||||||||| ||||| |||||| |||||||||||||||||    
T  9939368 tcaacttttccatggtgggaaagaactcccctttctcaaattaaatggcacct 9939420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 3848578 - 3848621
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatg 47  Q
    ||||||||||||||||||| || |||||||||||||||||||||    
T  3848578 actttcccatggtgggaaagaagtctcctttcccaaattaaatg 3848621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 21165498 - 21165447
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||| |||||||||||| |||| | ||||||||||||||||||||||    
T  21165498 tcaactttctcatggtgggaaagaactattctttcccaaattaaatggcacc 21165447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 38694753 - 38694702
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||| ||||| ||||||| ||||||||||| |||||||||||||||||    
T  38694753 tcaacttttccatgctgggaaagaactctccttttccaaattaaatggcacc 38694702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 47376903 - 47376852
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||| ||||    
T  47376903 tcaactttcccatgatgggaaacaactcccctttcccaaattaaatgccacc 47376852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 11680325 - 11680283
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 45  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  11680325 aactttcccatggtgggaaaaaactaacctttcccaaattaaa 11680283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 11688604 - 11688562
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 45  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  11688604 aactttcccatggtgggaaaaaactaacctttcccaaattaaa 11688562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 25370553 - 25370511
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatg 47  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  25370553 ctttcccatggtgggaaaaaactagcctttcccaaattaaatg 25370511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26610396 - 26610350
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatg 47  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  26610396 tcaattttcccatggtgggaaagaactctcatttcccaaattaaatg 26610350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 28684231 - 28684281
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||| |||||    
T  28684231 aactttcctatggtaggaaaaaagtctcctttcccaaattaaatgtcacct 28684281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36864868 - 36864818
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 51  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||| ||||    
T  36864868 tcaactttctcatggtgagaaagaactctcctttcccaaattaaatagcac 36864818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 30808670 - 30808621
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||| |||||||||||||||  ||||||| ||||    
T  30808670 aactttcccatggtgggaaacaactctcctttcccattttaaatgccacc 30808621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 37275137 - 37275088
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||| |||||||||||| || ||||||||||||||||||| ||||||    
T  37275137 aactttctcatggtgggaaagaagtctcctttcccaaattaaacggcacc 37275088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 46765169 - 46765218
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  46765169 ctttcccatggtgggaaaaaactagtctttcccaaattaaatgccacctc 46765218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 52757861 - 52757812
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||| |||| ||||||||| ||| |||||||||||||||||||||||    
T  52757861 actttcctatggagggaaaaaagtcttctttcccaaattaaatggcacct 52757812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 25371545 - 25371593
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||| |||||||||||| || ||||||||||||||||||||| ||||    
T  25371545 actttctcatggtgggaaagaagtctcctttcccaaattaaatgtcacc 25371593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39522426 - 39522374
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||  ||| |||| ||||||||||||||||||| |||||    
T  39522426 tcaactttcccatggtgaaaaagaactatcctttcccaaattaaatgacacct 39522374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 38014923 - 38014970
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||||| |||||||  |||||||||||||||| ||||||    
T  38014923 ctttcccatggtggggaaaaactagcctttcccaaattaaacggcacc 38014970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 55159228 - 55159177
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctcc 55  Q
    ||||||||||||| ||||| || ||||||||||||||||||||  |||||||    
T  55159228 actttcccatggtaggaaagaagtctcctttcccaaattaaataccacctcc 55159177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 10424385 - 10424419
Alignment:
Q  18 ggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||| |||||||||||||||||||||||||||||    
T  10424385 ggaaagaactctcctttcccaaattaaatggcacc 10424419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 12590202 - 12590244
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 45  Q
    |||||||||||||||| ||||||||  ||||||||||||||||    
T  12590202 aactttcccatggtggaaaaaaactagcctttcccaaattaaa 12590244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 21166171 - 21166137
Alignment:
Q  18 ggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||| |||||||||||||||||||||||||||||    
T  21166171 ggaaagaactctcctttcccaaattaaatggcacc 21166137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 23425206 - 23425256
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||| |||||||| |||||| | |||||| |||||    
T  23425206 aactttcccatggtgggaaacaactctccattcccatactaaatgccacct 23425256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 25655638 - 25655680
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 45  Q
    |||||||||||||||||||||||||   |||||||||||||||    
T  25655638 aactttcccatggtgggaaaaaactagtctttcccaaattaaa 25655680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29650466 - 29650416
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 51  Q
    |||||||||||| | ||| ||| ||||||| ||||||||||||||||||||    
T  29650466 tcaactttcccaagatggaaaagaactctcatttcccaaattaaatggcac 29650416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 29650655 - 29650689
Alignment:
Q  18 ggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||| |||||||||||||||||||||||||||||    
T  29650655 ggaaagaactctcctttcccaaattaaatggcacc 29650689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 31836255 - 31836221
Alignment:
Q  18 ggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||| |||||||||||||||||||||||||||||    
T  31836255 ggaaagaactctcctttcccaaattaaatggcacc 31836221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 31910603 - 31910553
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||||||||||||||||   ||||||| |||||||||| |||||    
T  31910603 aactttcccatggtgggaaaaaacaagcctttcctaaattaaatgacacct 31910553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 45235767 - 45235733
Alignment:
Q  18 ggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||| |||||||||||||||||||||||||||||    
T  45235767 ggaaagaactctcctttcccaaattaaatggcacc 45235733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25970157 - 25970120
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttccca 38  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  25970157 tcaactttcccatggtgggaaacaactcccctttccca 25970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 30478357 - 30478308
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  30478357 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 30478308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 42545562 - 42545611
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||| ||| |||||||||| | | ||||||||||||||||||||||    
T  42545562 aactttcctatgatgggaaaaaagtgtactttcccaaattaaatggcacc 42545611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 47199395 - 47199444
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||| ||||||||||| || |||| |||||||||||||||| |||||    
T  47199395 actttcctatggtgggaaagaagtctcttttcccaaattaaatgccacct 47199444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 48013365 - 48013316
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  48013365 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 48013316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 55160067 - 55160115
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||| ||||||  ||||||||||||||||||||| |||||    
T  55160067 actttcccatggtgagaaaaag-tctcctttcccaaattaaatgccacct 55160115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 11681275 - 11681323
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||||   |||| |||||||||||| |||||    
T  11681275 ctttcccatggtgggaaaaaactagtcttttccaaattaaatgccacct 11681323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 11689554 - 11689602
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||||   |||| |||||||||||| |||||    
T  11689554 ctttcccatggtgggaaaaaactagtcttttccaaattaaatgccacct 11689602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 12589334 - 12589286
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||| |||||||||||||   ||||||||||||||||| |||||    
T  12589334 ctttcccatagtgggaaaaaactaatctttcccaaattaaatgtcacct 12589286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 23383359 - 23383327
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttc 35  Q
    |||||||||||||||||||| ||||||||||||    
T  23383359 aactttcccatggtgggaaacaactctcctttc 23383327  T

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Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 23865321 - 23865365
Alignment:
Q  8 tcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||||| || ||||||||| ||||||||| ||||||    
T  23865321 tcccatggtgggaaacaagtctcctttcacaaattaaacggcacc 23865365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 52758709 - 52758757
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 51  Q
    |||||||||||| || |||||||||  | ||||||||||||||||||||    
T  52758709 aactttcccatgatgagaaaaaactagcatttcccaaattaaatggcac 52758757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 3e-19; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 51974488 - 51974436
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  51974488 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 51974436  T

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Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16270258 - 16270207
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16270258 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 16270207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23440862 - 23440913
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23440862 tcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 23440913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43737975 - 43738027
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  43737975 tcaactttcccatgatgggaaagaactctcctttcccaaattaaatggcacct 43738027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 48972442 - 48972494
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  48972442 tcaacttttccatggtgggaaagaactctcctttcccaaattaaatggcacct 48972494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9948884 - 9948935
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  9948884 tcaactttcccatggtgggaaagaactctcctttcctaaattaaatggcacc 9948935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 43737780 - 43737729
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  43737780 tcaactttcccatggtgggaaataactctactttcccaaattaaatggcacc 43737729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 1012596 - 1012546
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  1012596 aactttcccatggtgggaaaaaaatctcctttcccaaattaaacggcacct 1012546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 193899 - 193850
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  193899 aactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 193850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 50827088 - 50827138
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  50827088 tcaactttcccatggtgggaaaa-actctcctttctcaaattaaatggcacc 50827138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 51987875 - 51987826
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  51987875 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacct 51987826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9948046 - 9947995
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||| ||||||||||||| |||| | ||||||||||||||||||||||    
T  9948046 tcaacttttccatggtgggaaagaacttttctttcccaaattaaatggcacc 9947995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16271145 - 16271196
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||| || |||| ||||||||||||| |||||||||||||||    
T  16271145 tcaactttcccatgatgagaaagaactctcctttcctaaattaaatggcacc 16271196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23440668 - 23440617
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||| |||| || ||||| |||||||||||||||||||||||||||||    
T  23440668 tcaacttttccatagttggaaagaactctcctttcccaaattaaatggcacc 23440617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 48971756 - 48971705
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||| ||| |||||||| |||||||||||||||||||||||| ||||    
T  48971756 tcaactttctcattgtgggaaagaactctcctttcccaaattaaatgacacc 48971705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 51975224 - 51975275
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||| |||  ||| |||||||||||||||||||||||||||||    
T  51975224 tcaactttcccatagtgaaaaagaactctcctttcccaaattaaatggcacc 51975275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 35616775 - 35616824
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||||||||||| || ||||||||||||| ||||||| |||||    
T  35616775 actttcccatggtgggaaagaagtctcctttcccaagttaaatgccacct 35616824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38931244 - 38931293
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 50  Q
    |||||||||||||||| | ||| |||||| ||||||||||||||||||||    
T  38931244 tcaactttcccatggtagaaaagaactcttctttcccaaattaaatggca 38931293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 45064734 - 45064685
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||| ||||||||||||   |||||||||||||||||||||||    
T  45064734 actttcccatgatgggaaaaaactaatctttcccaaattaaatggcacct 45064685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 49611562 - 49611607
Alignment:
Q  6 tttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 51  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||||    
T  49611562 tttcccatgatgggaaaaaactagcctttcccaaattaaatggcac 49611607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 8560887 - 8560839
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||| ||||||| || ||||||||||||||||||||| ||||    
T  8560887 actttcccatgatgggaaagaagtctcctttcccaaattaaatgtcacc 8560839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 49610754 - 49610706
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||| ||||||||| ||| ||||||||||| ||||||||||    
T  49610754 actttcccatggagggaaaaaagtcttctttcccaaataaaatggcacc 49610706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 51988464 - 51988512
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  51988464 actttcccatggtggaaaagaagtctcctttcccaaattaaatgccacc 51988512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 38930363 - 38930312
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||  ||| |||| ||||||||||||||||||| ||||    
T  38930363 tcaactttcccatggtgaaaaagaactttcctttcccaaattaaatgacacc 38930312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 1013471 - 1013521
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||||||||| ||| |||  ||||||||||||||||||| |||||    
T  1013471 aactttcccatggtggaaaataacattcctttcccaaattaaatgacacct 1013521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 16270935 - 16270901
Alignment:
Q  18 ggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||| |||||||||||||||||||||||||||||    
T  16270935 ggaaagaactctcctttcccaaattaaatggcacc 16270901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 38930574 - 38930608
Alignment:
Q  18 ggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||| |||||||||||||||||||||||||||||    
T  38930574 ggaaagaactctcctttcccaaattaaatggcacc 38930608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 45065385 - 45065435
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    ||||||||||||||||||||||||   | ||| ||||||||||||||||||    
T  45065385 aactttcccatggtgggaaaaaacaagctttttccaaattaaatggcacct 45065435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 48870753 - 48870795
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaat 46  Q
    |||||||||||||||||||||| |||| |||||||| ||||||    
T  48870753 actttcccatggtgggaaaaaagtctcatttcccaagttaaat 48870795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 194701 - 194749
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  194701 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 194749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 8561737 - 8561785
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 53  Q
    |||||||||| ||||||||||||   ||||||||||||||||| |||||    
T  8561737 ctttcccatgatgggaaaaaactagtctttcccaaattaaatgtcacct 8561785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 14924721 - 14924681
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 45  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  14924721 ctttcccatggtgggaaacaacttccctttcccaaattaaa 14924681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 14925343 - 14925383
Alignment:
Q  5 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 45  Q
    |||||||||||||||||| |||| ||||| |||||||||||    
T  14925343 ctttcccatggtgggaaacaactttccttccccaaattaaa 14925383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 37874112 - 37874064
Alignment:
Q  4 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||||||||| || |||| |||||||| ||||||| ||||    
T  37874112 actttcccatggtgggaaagaagtctcatttcccaagttaaatgtcacc 37874064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 48869815 - 48869767
Alignment:
Q  6 tttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 54  Q
    ||||||||||||| ||| || ||||||||||||| ||||||| ||||||    
T  48869815 tttcccatggtggaaaagaagtctcctttcccaagttaaatgtcacctc 48869767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27572 - 27623
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27572 tcaactttcccatggtgggaaaaaactctccttttccaaattaaatggcacc 27623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27272 - 27221
Alignment:
Q  1 tcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  27272 tcaactttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 27221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 17388 - 17339
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    ||||||||||||||||||||||||   ||||| |||||||||||||||||    
T  17388 aactttcccatggtgggaaaaaacaagccttttccaaattaaatggcacc 17339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 9257 - 9306
Alignment:
Q  3 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 52  Q
    |||||| ||||||||  ||||||||||||||| |||||||||||| ||||    
T  9257 aacttttccatggtgaaaaaaaactctccttttccaaattaaatgacacc 9306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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