View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2061_high_13 (Length: 437)
Name: NF2061_high_13
Description: NF2061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2061_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 389; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 1 - 417
Target Start/End: Original strand, 22807376 - 22807792
Alignment:
| Q |
1 |
cacattattacagggaaaagtcaacaatcaacgtgaggcaaagaacccaggtaatccagctagaagggtttacctgcggtaacggagtatagcaatccat |
100 |
Q |
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||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
22807376 |
cacattattacagggaaaagtgaacgatcaacgtgaggcaaagaacccaggtaatccagctagaaggatttacctgcggtaacggagtatagcaatccat |
22807475 |
T |
|
| Q |
101 |
tctttttgaggaatacaaaaactccaggaaagaagttgccgaatttcagaataagggaaaaattagcctgatatcacacgacttattgaagctttatatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
22807476 |
tctttttgaggaatacaaaaactccaggaaagaagttgcccaatttcaaaataagggaaaaattagcctgatatcacacgacttattgaagcttcatatt |
22807575 |
T |
|
| Q |
201 |
ggtttgtgtactaactcttgtatatagggtgagtgggtattatggttatgaccccagcctgcaatgttaggtgataaaattttggttcctgtttttgaca |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
22807576 |
ggtttgtgtactaactcttgtatatagggtgagtgggtattatggttatgaccccagcctgcaatgttaggtgataaaattttggtttctgtttttgaca |
22807675 |
T |
|
| Q |
301 |
aaataccaaacttcaaattctttttgcattaccttttgtggcttttcatcacactatcatacgatgcaattcacctggtcttattttacaaaagtacatc |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22807676 |
aaataccaaacttcaaattctttttgcattaccttttgtggcttttcatcacactatcatacgatgcaattcacctggtcttattttacaaaagtacatc |
22807775 |
T |
|
| Q |
401 |
acaaattattgatttaa |
417 |
Q |
| |
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||||||||||||||||| |
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| T |
22807776 |
acaaattattgatttaa |
22807792 |
T |
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