View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20620_high_69 (Length: 254)
Name: NF20620_high_69
Description: NF20620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20620_high_69 |
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Alignment Details
Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 26142452 - 26142694
Alignment:
| Q |
1 |
aacgagaacttgttcttttccaatccaccaaatgccgcaaaaattctccaacctatatacaaaatttatatgaaagttacatctttgattttatatagtt |
100 |
Q |
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| T |
26142452 |
aacgagaacttgttcttttccaatccaccaaatgccgcaaaaattctccaacctatatacaaaatttaaatgaaaattacatctttgattttatatagtt |
26142551 |
T |
|
| Q |
101 |
ttatatgaaaatataaataatgattaatgattgaatttcttacctcagatggatcttgcaaagtgtaagaagcattagtttcttttgaaattttagaaac |
200 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
26142552 |
ttatatgaaaatataaatgatgattaatgattgaatttcttacctcagatggatcttgcaaagtgtaagaagcattagtttcttttgaaatttttgaaac |
26142651 |
T |
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| Q |
201 |
aagtatgccacacccttggcccctattgcgtaaaacctatatt |
243 |
Q |
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||| || |||||||||||||||||||||||||||||||||||| |
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| T |
26142652 |
aagaatcccacacccttggcccctattgcgtaaaacctatatt |
26142694 |
T |
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