View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20620_high_71 (Length: 253)
Name: NF20620_high_71
Description: NF20620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20620_high_71 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 13 - 253
Target Start/End: Original strand, 36570564 - 36570804
Alignment:
| Q |
13 |
agatgaagagtgggtattttcgttaatgtaaaaatggttaacaaaacaagaacaaagtacaggagaatatggcatacatacactcatactatagaacagt |
112 |
Q |
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| T |
36570564 |
agatgaagagtgggtattttcgttaatgtaaaaatggttaacaaaacaagaacaaagtacaggagaatatggcatacatacactcatactatagaacagt |
36570663 |
T |
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| Q |
113 |
agaggaagtcacttgttcacaaaattcctcaattccttaaatggcatgaatcgcatgaaaagtgttcgtagaatgtttccatccacaggacaaaaattaa |
212 |
Q |
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| T |
36570664 |
agaggaagtcacttgttcacaaaattcctcaattccttaaatggcatgaatcgcatgaaaagtgttcgtagaatgtttccatccacaggacaaaaattaa |
36570763 |
T |
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| Q |
213 |
acacatacgaataatttaatcatagaaatgcatcgaatcca |
253 |
Q |
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| T |
36570764 |
acacatacgaataatttaatcatagaaatgcatcgaatcca |
36570804 |
T |
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