View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20620_high_95 (Length: 222)
Name: NF20620_high_95
Description: NF20620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20620_high_95 |
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Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 1834096 - 1833902
Alignment:
| Q |
17 |
aatatgtccacatcttccattgctagatctttgctctctgcttccatgtatggataatttgttccatgttgcaaaacatgaaactctgcatggtaattta |
116 |
Q |
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| T |
1834096 |
aatatgtccacatcttccattgctagatctttgctctctgcttccatgtatggataatttgttccatgttgcaaaacatgaaactctgcatggtaattta |
1833997 |
T |
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| Q |
117 |
aatgtgattgtgataagggttgaaatctataaaaacaagtaacaaactaactacctaaagttttgtttggaaaagtttaattttgttcatctcat |
211 |
Q |
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| T |
1833996 |
aatgtgattgtgataagggttgaaatctataaaaacaagtaacaaactaactacctaaagttttgtttggaaaagtttaattttgtttatctcat |
1833902 |
T |
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