View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20620_high_99 (Length: 215)
Name: NF20620_high_99
Description: NF20620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20620_high_99 |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 39937338 - 39937139
Alignment:
| Q |
1 |
tggatctcatgtgcagcaagttacttcacatattatttaaaaaatttgtaatcaaaaataatattagaggacaaaatacctgcatcaattgaaactgcat |
100 |
Q |
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| T |
39937338 |
tggatctcatgtgcaacaagttacttcacatattatttaaaaaatttgtaatcagaaataatattagaggacaaaatacctgcatcaattgaaactgcat |
39937239 |
T |
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| Q |
101 |
ctggtggggtccaagatattgttgataagaatcactgaagtttggggtacgtgactgatttgaatcatgtgttccagctgaggtgatcacattattatct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39937238 |
ctggtggggtccaagatattgttgataagaatcactgaagtttggggtacgtgactgatttgaatcatgtgttccagctgaggtgatcacattattatct |
39937139 |
T |
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