View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20621_low_1 (Length: 406)

Name: NF20621_low_1
Description: NF20621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20621_low_1
NF20621_low_1
[»] chr7 (46 HSPs)
chr7 (4-387)||(3094148-3094534)
chr7 (194-334)||(29229667-29229804)
chr7 (198-333)||(35985255-35985389)
chr7 (198-333)||(36006663-36006797)
chr7 (201-333)||(29229687-29229816)
chr7 (193-319)||(35985266-35985391)
chr7 (193-319)||(36006674-36006799)
chr7 (194-326)||(39751072-39751202)
chr7 (256-334)||(35274480-35274558)
chr7 (198-333)||(2399711-2399845)
chr7 (255-323)||(34427573-34427641)
chr7 (198-333)||(35274408-35274541)
chr7 (255-326)||(12423712-12423783)
chr7 (45-92)||(21544682-21544729)
chr7 (194-288)||(42926992-42927084)
chr7 (193-322)||(17801384-17801516)
chr7 (256-322)||(39751071-39751137)
chr7 (193-307)||(3094353-3094469)
chr7 (257-333)||(31498486-31498562)
chr7 (254-322)||(42926991-42927059)
chr7 (45-92)||(7143589-7143636)
chr7 (49-92)||(7494510-7494553)
chr7 (269-324)||(39962048-39962102)
chr7 (194-334)||(2635604-2635743)
chr7 (194-334)||(7307692-7307831)
chr7 (193-243)||(16970312-16970362)
chr7 (247-334)||(18701018-18701107)
chr7 (198-244)||(19509348-19509393)
chr7 (267-333)||(34670348-34670414)
chr7 (200-237)||(3967795-3967832)
chr7 (45-86)||(4091354-4091395)
chr7 (208-326)||(5103682-5103795)
chr7 (193-238)||(7307704-7307749)
chr7 (45-86)||(18494563-18494604)
chr7 (256-333)||(28038468-28038545)
chr7 (198-290)||(34427545-34427635)
chr7 (269-336)||(3374457-3374525)
chr7 (115-159)||(7857936-7857980)
chr7 (198-289)||(12423685-12423774)
chr7 (198-226)||(34670364-34670392)
chr7 (267-315)||(35436305-35436353)
chr7 (254-290)||(39962108-39962144)
chr7 (261-317)||(45981023-45981078)
chr7 (255-315)||(47718586-47718645)
chr7 (117-149)||(48138551-48138583)
chr7 (255-322)||(48634182-48634250)
[»] chr4 (41 HSPs)
chr4 (198-333)||(7277427-7277561)
chr4 (198-320)||(7277424-7277545)
chr4 (193-322)||(20291788-20291916)
chr4 (198-334)||(10065077-10065212)
chr4 (269-326)||(39993123-39993180)
chr4 (194-325)||(6371918-6372048)
chr4 (198-335)||(38562137-38562273)
chr4 (198-334)||(10065060-10065195)
chr4 (198-326)||(20291793-20291920)
chr4 (198-326)||(23673359-23673485)
chr4 (256-322)||(23673424-23673490)
chr4 (208-334)||(22235281-22235406)
chr4 (267-334)||(6371994-6372061)
chr4 (267-333)||(8679022-8679089)
chr4 (266-333)||(22048895-22048961)
chr4 (267-334)||(52840262-52840329)
chr4 (263-321)||(20783696-20783754)
chr4 (45-86)||(20717954-20717995)
chr4 (194-333)||(32125333-32125471)
chr4 (193-334)||(33508526-33508666)
chr4 (243-307)||(21861105-21861169)
chr4 (243-307)||(21916968-21917032)
chr4 (269-333)||(23614456-23614520)
chr4 (198-242)||(33508543-33508587)
chr4 (300-335)||(19876430-19876465)
chr4 (195-234)||(23614410-23614449)
chr4 (259-326)||(32125409-32125476)
chr4 (114-149)||(43770604-43770639)
chr4 (45-91)||(10450301-10450347)
chr4 (302-336)||(24654144-24654178)
chr4 (259-321)||(30920780-30920842)
chr4 (193-223)||(33004177-33004207)
chr4 (198-334)||(38562120-38562255)
chr4 (268-321)||(54919025-54919079)
chr4 (94-160)||(55579918-55579984)
chr4 (269-334)||(53225729-53225794)
chr4 (269-326)||(56257416-56257473)
chr4 (198-234)||(23614468-23614504)
chr4 (269-321)||(33508613-33508665)
chr4 (194-337)||(35755027-35755164)
chr4 (218-324)||(48601111-48601216)
[»] chr1 (74 HSPs)
chr1 (193-327)||(29853170-29853302)
chr1 (198-334)||(24419527-24419662)
chr1 (198-333)||(24419544-24419678)
chr1 (193-334)||(8174101-8174241)
chr1 (202-317)||(47154662-47154774)
chr1 (269-324)||(882930-882985)
chr1 (194-326)||(14231048-14231179)
chr1 (198-333)||(35489208-35489342)
chr1 (194-333)||(29853159-29853296)
chr1 (194-322)||(51171263-51171390)
chr1 (200-315)||(25554556-25554670)
chr1 (267-334)||(8900788-8900855)
chr1 (198-319)||(8900805-8900925)
chr1 (255-326)||(47154716-47154787)
chr1 (256-334)||(457640-457718)
chr1 (259-333)||(14231117-14231191)
chr1 (256-334)||(30412591-30412669)
chr1 (202-334)||(31032457-31032588)
chr1 (198-334)||(457567-457701)
chr1 (269-334)||(9675960-9676025)
chr1 (269-334)||(38636283-38636348)
chr1 (198-336)||(8174087-8174224)
chr1 (269-321)||(21945065-21945117)
chr1 (280-340)||(42074225-42074285)
chr1 (218-292)||(1442069-1442141)
chr1 (259-326)||(1609966-1610033)
chr1 (269-324)||(4604919-4604974)
chr1 (201-334)||(34890200-34890332)
chr1 (259-334)||(47084635-47084710)
chr1 (267-334)||(49166687-49166754)
chr1 (259-333)||(38758371-38758445)
chr1 (259-340)||(5700105-5700186)
chr1 (194-321)||(11016597-11016722)
chr1 (279-340)||(15241114-15241175)
chr1 (267-336)||(35489189-35489258)
chr1 (256-333)||(47911845-47911922)
chr1 (243-291)||(9938466-9938514)
chr1 (216-315)||(10325314-10325410)
chr1 (193-323)||(11016595-11016723)
chr1 (194-242)||(14240806-14240854)
chr1 (122-158)||(29370767-29370803)
chr1 (267-331)||(34890183-34890247)
chr1 (279-335)||(38636222-38636278)
chr1 (199-242)||(10332049-10332092)
chr1 (49-92)||(34522139-34522182)
chr1 (45-92)||(50048261-50048308)
chr1 (193-258)||(1609970-1610033)
chr1 (195-307)||(27634293-27634403)
chr1 (267-333)||(31032437-31032503)
chr1 (198-236)||(38636240-38636278)
chr1 (269-321)||(1226741-1226794)
chr1 (269-334)||(1610031-1610095)
chr1 (256-333)||(4540616-4540693)
chr1 (269-334)||(5091751-5091816)
chr1 (293-334)||(5368769-5368810)
chr1 (45-94)||(17836789-17836838)
chr1 (194-223)||(36618822-36618851)
chr1 (294-323)||(37247678-37247707)
chr1 (193-242)||(37925784-37925833)
chr1 (255-308)||(44661787-44661840)
chr1 (266-315)||(46508157-46508206)
chr1 (257-321)||(50403096-50403161)
chr1 (198-242)||(882937-882981)
chr1 (198-242)||(5700119-5700163)
chr1 (111-163)||(9697352-9697404)
chr1 (200-299)||(10325314-10325410)
chr1 (281-337)||(38173511-38173567)
chr1 (198-242)||(38636287-38636331)
chr1 (198-226)||(41944781-41944809)
chr1 (117-149)||(46594265-46594297)
chr1 (198-242)||(49166693-49166737)
chr1 (259-311)||(50105677-50105729)
chr1 (269-336)||(50692077-50692145)
chr1 (117-149)||(50709580-50709612)
[»] chr5 (45 HSPs)
chr5 (192-317)||(35463964-35464087)
chr5 (194-323)||(16829208-16829331)
chr5 (268-334)||(28499776-28499842)
chr5 (194-324)||(39231797-39231926)
chr5 (196-326)||(1249110-1249239)
chr5 (198-335)||(7065596-7065732)
chr5 (269-340)||(40772957-40773028)
chr5 (198-333)||(16829214-16829343)
chr5 (246-326)||(28351002-28351082)
chr5 (194-242)||(28351029-28351077)
chr5 (196-317)||(35463962-35464081)
chr5 (256-333)||(8850331-8850408)
chr5 (255-336)||(17768074-17768155)
chr5 (245-321)||(24404806-24404882)
chr5 (198-332)||(28499793-28499925)
chr5 (254-333)||(12645414-12645493)
chr5 (279-333)||(14751216-14751270)
chr5 (263-321)||(18200668-18200726)
chr5 (261-323)||(18550982-18551044)
chr5 (199-323)||(34445273-34445396)
chr5 (266-331)||(32741390-32741455)
chr5 (246-326)||(3733763-3733842)
chr5 (45-85)||(11273693-11273733)
chr5 (193-272)||(24404805-24404882)
chr5 (257-321)||(41930328-41930392)
chr5 (269-321)||(43221642-43221694)
chr5 (278-333)||(5865931-5865986)
chr5 (198-326)||(14509831-14509959)
chr5 (256-323)||(19087845-19087912)
chr5 (259-326)||(40773043-40773110)
chr5 (198-286)||(1249119-1249205)
chr5 (273-323)||(11089378-11089428)
chr5 (198-236)||(14751216-14751254)
chr5 (279-325)||(15474420-15474466)
chr5 (278-324)||(35458130-35458176)
chr5 (199-236)||(5354761-5354798)
chr5 (269-337)||(6266219-6266288)
chr5 (114-151)||(12118360-12118397)
chr5 (45-82)||(26502024-26502061)
chr5 (268-333)||(30046387-30046452)
chr5 (269-322)||(37514242-37514295)
chr5 (198-242)||(18550988-18551032)
chr5 (196-236)||(33366304-33366344)
chr5 (270-326)||(35458208-35458264)
chr5 (117-149)||(42990735-42990767)
[»] chr2 (45 HSPs)
chr2 (198-323)||(30429080-30429202)
chr2 (198-326)||(41221641-41221767)
chr2 (194-326)||(27279489-27279613)
chr2 (198-333)||(30429064-30429196)
chr2 (194-334)||(41221624-41221762)
chr2 (200-333)||(472407-472539)
chr2 (263-334)||(41517439-41517510)
chr2 (255-339)||(644097-644188)
chr2 (268-333)||(9733546-9733611)
chr2 (255-323)||(31719186-31719254)
chr2 (269-333)||(37287166-37287230)
chr2 (259-333)||(11564996-11565070)
chr2 (198-333)||(472423-472557)
chr2 (193-324)||(25997323-25997453)
chr2 (200-326)||(29168513-29168638)
chr2 (259-333)||(11021127-11021201)
chr2 (198-326)||(29168502-29168629)
chr2 (259-333)||(32516205-32516279)
chr2 (198-336)||(11021047-11021185)
chr2 (114-151)||(16496831-16496868)
chr2 (258-307)||(22352082-22352131)
chr2 (265-333)||(9733474-9733542)
chr2 (198-242)||(9733551-9733595)
chr2 (198-242)||(27279498-27279542)
chr2 (255-322)||(32965716-32965784)
chr2 (194-333)||(33853837-33853974)
chr2 (263-322)||(1358686-1358745)
chr2 (270-333)||(12488073-12488136)
chr2 (45-92)||(31000619-31000666)
chr2 (243-289)||(4860278-4860324)
chr2 (259-305)||(25931643-25931689)
chr2 (259-317)||(25997328-25997386)
chr2 (256-334)||(34360834-34360912)
chr2 (254-332)||(41824326-41824404)
chr2 (269-326)||(12487995-12488052)
chr2 (200-237)||(23143499-23143536)
chr2 (200-237)||(23555289-23555326)
chr2 (267-324)||(33956365-33956422)
chr2 (199-244)||(34090221-34090266)
chr2 (200-237)||(40363232-40363269)
chr2 (198-242)||(12488076-12488120)
chr2 (48-92)||(24318747-24318791)
chr2 (270-326)||(28936089-28936145)
chr2 (198-238)||(31719192-31719232)
chr2 (263-315)||(42818915-42818967)
[»] chr3 (44 HSPs)
chr3 (198-333)||(26331229-26331361)
chr3 (198-337)||(55121185-55121323)
chr3 (198-332)||(26331214-26331345)
chr3 (198-336)||(27786467-27786604)
chr3 (198-326)||(11534757-11534884)
chr3 (269-321)||(25108987-25109039)
chr3 (198-334)||(30121962-30122101)
chr3 (199-333)||(37914525-37914656)
chr3 (193-333)||(16867613-16867752)
chr3 (194-287)||(21150149-21150240)
chr3 (193-337)||(27786447-27786590)
chr3 (45-91)||(33913400-33913446)
chr3 (259-336)||(9502864-9502941)
chr3 (269-333)||(28732453-28732518)
chr3 (259-332)||(31836482-31836555)
chr3 (269-326)||(55121176-55121233)
chr3 (198-242)||(16867629-16867673)
chr3 (269-333)||(49733617-49733681)
chr3 (252-324)||(52417691-52417762)
chr3 (255-322)||(21150148-21150215)
chr3 (198-237)||(26601974-26602013)
chr3 (273-324)||(30121955-30122006)
chr3 (198-316)||(37914541-37914656)
chr3 (198-326)||(18093780-18093907)
chr3 (269-334)||(1779488-1779553)
chr3 (259-324)||(18093849-18093914)
chr3 (259-324)||(29595823-29595887)
chr3 (267-319)||(26601972-26602024)
chr3 (256-328)||(47250905-47250976)
chr3 (117-164)||(20179057-20179104)
chr3 (259-334)||(29212914-29212989)
chr3 (198-334)||(11534766-11534901)
chr3 (259-337)||(28732530-28732608)
chr3 (258-316)||(29290794-29290852)
chr3 (49-86)||(14419353-14419390)
chr3 (259-319)||(36081788-36081851)
chr3 (258-315)||(39682622-39682679)
chr3 (261-326)||(50626762-50626827)
chr3 (261-321)||(612569-612628)
chr3 (270-326)||(19790725-19790781)
chr3 (269-317)||(25494625-25494673)
chr3 (45-85)||(25918095-25918135)
chr3 (259-299)||(42896175-42896215)
chr3 (117-149)||(43471826-43471858)
[»] chr8 (36 HSPs)
chr8 (198-324)||(14578507-14578631)
chr8 (198-322)||(14578514-14578636)
chr8 (271-322)||(33072623-33072674)
chr8 (268-321)||(18147818-18147871)
chr8 (269-336)||(4578269-4578337)
chr8 (267-323)||(27988084-27988140)
chr8 (267-323)||(28045386-28045442)
chr8 (45-85)||(32240461-32240501)
chr8 (268-323)||(6590863-6590918)
chr8 (267-332)||(6616589-6616654)
chr8 (269-342)||(14113294-14113367)
chr8 (193-242)||(18147817-18147866)
chr8 (279-336)||(20694510-20694567)
chr8 (258-326)||(289120-289187)
chr8 (267-335)||(14113206-14113274)
chr8 (198-242)||(27988090-27988134)
chr8 (198-242)||(28045392-28045436)
chr8 (244-324)||(31245177-31245257)
chr8 (198-242)||(33072628-33072672)
chr8 (259-315)||(34286273-34286329)
chr8 (265-333)||(40737899-40737967)
chr8 (265-336)||(1156996-1157067)
chr8 (194-237)||(4079553-4079596)
chr8 (258-321)||(9503612-9503675)
chr8 (37-92)||(12957563-12957618)
chr8 (45-92)||(13305673-13305720)
chr8 (255-317)||(30114809-30114870)
chr8 (47-92)||(1644395-1644440)
chr8 (269-326)||(2602055-2602112)
chr8 (269-334)||(7693118-7693183)
chr8 (256-321)||(9503519-9503584)
chr8 (293-326)||(14110085-14110118)
chr8 (45-86)||(28900139-28900180)
chr8 (269-322)||(30557009-30557062)
chr8 (45-85)||(28075681-28075721)
chr8 (198-238)||(30557017-30557057)
[»] chr6 (27 HSPs)
chr6 (198-323)||(3846442-3846566)
chr6 (198-333)||(3846426-3846560)
chr6 (243-326)||(29977976-29978057)
chr6 (193-307)||(2271147-2271259)
chr6 (256-326)||(2271193-2271263)
chr6 (208-326)||(674071-674188)
chr6 (267-323)||(24252960-24253016)
chr6 (45-92)||(13194292-13194339)
chr6 (198-244)||(674133-674179)
chr6 (256-334)||(7055626-7055704)
chr6 (193-333)||(7055554-7055692)
chr6 (196-244)||(9692822-9692870)
chr6 (45-85)||(9942435-9942475)
chr6 (45-85)||(22727253-22727293)
chr6 (194-242)||(24252966-24253014)
chr6 (193-241)||(29400673-29400721)
chr6 (45-92)||(15576204-15576251)
chr6 (45-92)||(16529378-16529425)
chr6 (276-334)||(862816-862874)
chr6 (117-151)||(6724512-6724546)
chr6 (269-319)||(31159086-31159136)
chr6 (193-242)||(5069946-5069995)
chr6 (268-321)||(5069947-5070000)
chr6 (259-329)||(24089695-24089767)
chr6 (208-248)||(690973-691013)
chr6 (112-164)||(8485988-8486040)
chr6 (45-85)||(17320795-17320835)
[»] scaffold0003 (2 HSPs)
scaffold0003 (193-307)||(320692-320805)
scaffold0003 (208-335)||(320692-320818)
[»] scaffold0514 (2 HSPs)
scaffold0514 (268-321)||(5827-5880)
scaffold0514 (193-242)||(5826-5875)
[»] scaffold0470 (1 HSPs)
scaffold0470 (267-332)||(5875-5940)
[»] scaffold0362 (1 HSPs)
scaffold0362 (45-94)||(9974-10023)
[»] scaffold0171 (2 HSPs)
scaffold0171 (45-92)||(7372-7419)
scaffold0171 (45-86)||(22583-22624)


Alignment Details
Target: chr7 (Bit Score: 300; Significance: 1e-168; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 4 - 387
Target Start/End: Original strand, 3094148 - 3094534
Alignment:
Q  4 aacgatttggtgctacttcttaagcttaccaattaagcttcctactttattacttgttacaatttggtgctcttgccaatttcctccattacaatgttat 103  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  3094148 aacgatttgatgctacttcttaagcttatcaattaagcttcctactttattacttgttacgatttggtgctcttgtcaatttcctccattacaatgttat 3094247  T
Q  104 aagaatgtagtgaagatgtatatgattcaatttaagatgtgaatcagttgaattgtctctttaaccatacttagaagttattcccacatatcatatttat 203  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  3094248 aagaatgtagtggagatgtatatgattcaatttaagatatgaattagtttaattgtctctttaaccatacttagaagttattcgcacagatcatatttat 3094347  T
Q  204 aagc-aaaaaacaactttttaggttcactgaataactaatatgtatctgact--tatatatagatcagatacattagttattcaatgaaccttaaaagtt 300  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||| |||||||||||||||||||||||||||||||    
T  3094348 aagcaaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatatagaccaggtacattagttattcaatgaaccttaaaagtt 3094447  T
Q  301 attttttacttataaatgtgaccggaaggagtatgttttttgtggatgaagctaatgagagagatgggactcagtaagtcaatatta 387  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  3094448 attttttacttataaatgtgatcggagggagtatattttttgtggatgaaggtaatgagagagatgggactcattaagtcaatatta 3094534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 29229804 - 29229667
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacctt 293  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||  ||||||||| |||||||||| || || |||||||| || |||||| ||     
T  29229804 tcatatttataagcaaaaa-caactttttaggttcattgaataactaat--gtatctgacctatatatagaccaaatgcattagttgtttaatgaatcta 29229708  T
Q  294 aaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    ||||||| |||||| |||||| ||||||||||| |||||||    
T  29229707 aaaagttgttttttgcttatatatgtgaccggatggagtat 29229667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 198 - 333
Target Start/End: Complemental strand, 35985389 - 35985255
Alignment:
Q  198 atttataagcaaa-aaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaa 296  Q
    ||||||||| ||| |||||||||||||| || | ||||||||||||  |||| |||||||||||||| ||| |||||||||||||||||| || || |||    
T  35985389 atttataagaaaagaaacaactttttagattaattgaataactaat--gtatttgacttatatataggtcatatacattagttattcaattaatctaaaa 35985292  T
Q  297 agttattttttacttataaatgtgaccggaaggagta 333  Q
    |||| | |||| ||||||||||||| || ||||||||    
T  35985291 agttgtattttgcttataaatgtgatcgaaaggagta 35985255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 198 - 333
Target Start/End: Complemental strand, 36006797 - 36006663
Alignment:
Q  198 atttataagcaaa-aaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaa 296  Q
    ||||||||| ||| |||||||||||||| || | ||||||||||||  |||| |||||||||||||| ||| |||||||||||||||||| || || |||    
T  36006797 atttataagaaaagaaacaactttttagattaattgaataactaat--gtatttgacttatatataggtcatatacattagttattcaattaatctaaaa 36006700  T
Q  297 agttattttttacttataaatgtgaccggaaggagta 333  Q
    |||| | |||| ||||||||||||| || ||||||||    
T  36006699 agttgtattttgcttataaatgtgatcgaaaggagta 36006663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 201 - 333
Target Start/End: Original strand, 29229687 - 29229816
Alignment:
Q  201 tataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaagtt 300  Q
    |||||||||||||||||||||||| |||| | || |||||||  | || ||   ||||||||| |||||||||||||||||||||||||||| |||||||    
T  29229687 tataagcaaaaaacaactttttagattcattaaacaactaat--gcatttggtctatatataggtcagatacattagttattcaatgaacctaaaaagtt 29229784  T
Q  301 attttttacttataaatgtgaccggaaggagta 333  Q
      ||||| ||||||||| |||||||| ||||||    
T  29229785 -gtttttgcttataaatatgaccggagggagta 29229816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 193 - 319
Target Start/End: Original strand, 35985266 - 35985391
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacct 292  Q
    |||| |||||||||||||| |||||||||||| || | ||||||||||  |||||| |||| ||||||||  ||| |||||||||||||||||| || ||    
T  35985266 atcacatttataagcaaaatacaactttttagattaattgaataacta--atgtatatgacctatatataagtcaaatacattagttattcaattaatct 35985363  T
Q  293 taaaagttattt-tttacttataaatgt 319  Q
     ||||||| ||| ||| |||||||||||    
T  35985364 aaaaagttgtttcttttcttataaatgt 35985391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 193 - 319
Target Start/End: Original strand, 36006674 - 36006799
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacct 292  Q
    |||| |||||||||||||| |||||||||||| || | ||||||||||  |||||| |||| ||||||||  ||| |||||||||||||||||| || ||    
T  36006674 atcacatttataagcaaaatacaactttttagattaattgaataacta--atgtatatgacctatatataagtcaaatacattagttattcaattaatct 36006771  T
Q  293 taaaagttattt-tttacttataaatgt 319  Q
     ||||||| ||| ||| |||||||||||    
T  36006772 aaaaagttgtttcttttcttataaatgt 36006799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 326
Target Start/End: Original strand, 39751072 - 39751202
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacctt 293  Q
    ||||||||||||| ||||||||||||||||| |||| | |||| |||||  |||| ||   ||||||| | | | |||||||||||||||||||||  |     
T  39751072 tcatatttataagtaaaaaacaactttttagattcattaaatatctaat--gtatatggtctatatattggtaaaatacattagttattcaatgaattta 39751169  T
Q  294 aaaagttattttttacttataaatgtgaccgga 326  Q
    || | ||||||||||| ||||||||||| ||||    
T  39751170 aacatttattttttacctataaatgtgatcgga 39751202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 334
Target Start/End: Original strand, 35274480 - 35274558
Alignment:
Q  256 atatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    ||||||||| || ||||||||  |||||||||||||| ||||||   ||||| |||||||||||||||||| |||||||    
T  35274480 atatatagaccaaatacattatgtattcaatgaacctaaaaagtgcatttttgcttataaatgtgaccggagggagtat 35274558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 333
Target Start/End: Original strand, 2399711 - 2399845
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaaccttaaa 296  Q
    ||||||||||||||||||||||| || || || ||||||  ||||  |||||| ||||||| ||  || | ||||||||| |||||||||  || | |||    
T  2399711 atttataagcaaaaaacaactttctaagtacattgaatagttaat--gtatctaacttataaatgtgaccggatacattaattattcaatatacttaaaa 2399808  T
Q  297 agttattttttacttataaatgtgaccggaaggagta 333  Q
    |||||||||||| |||||||| |||| ||| ||||||    
T  2399809 agttattttttatttataaatatgacaggagggagta 2399845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 255 - 323
Target Start/End: Original strand, 34427573 - 34427641
Alignment:
Q  255 tatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgacc 323  Q
    ||||||||| ||||||| |||||||||| ||||||| | |||| ||| ||||| |||||||||||||||    
T  34427573 tatatataggtcagatatattagttattgaatgaacttaaaaaattactttttgcttataaatgtgacc 34427641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 333
Target Start/End: Complemental strand, 35274541 - 35274408
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaa 297  Q
    |||||||||||||||   |||||||||||||| ||||||  ||||  |||| ||   ||||||| || || ||||||||  |||| |||||| |  ||||    
T  35274541 atttataagcaaaaatgcactttttaggttcattgaatacataat--gtatttggtctatatattgaccaaatacattaaatattgaatgaatcaaaaaa 35274444  T
Q  298 gttattttttacttataaatgtgaccggaaggagta 333  Q
    || ||||||| |||||||||||||||||| ||||||    
T  35274443 gtgattttttgcttataaatgtgaccggagggagta 35274408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 12423712 - 12423783
Alignment:
Q  255 tatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    ||||||||| ||| ||||||||  |||||||||||||| ||||||   ||||| ||||||||||||||||||    
T  12423712 tatatataggtcaaatacattatgtattcaatgaacctaaaaagtacatttttgcttataaatgtgaccgga 12423783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 21544729 - 21544682
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttcctccat 92  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  21544729 ctactttattacttgttacgatttggtgcacttgccaatttcgtccat 21544682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 288
Target Start/End: Original strand, 42926992 - 42927084
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatga 288  Q
    |||||||||||| |||||| |||||| |||| |||| ||||||||||  |||||| |||  |||||||| |||  |||||||| |||||||||||    
T  42926992 tcatatttataaacaaaaatcaacttcttagattcattgaataacta--atgtatttgatctatatataaatcgaatacattatttattcaatga 42927084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 322
Target Start/End: Complemental strand, 17801516 - 17801384
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatct-gacttatatatagatcagatacattagttattcaatgaacc 291  Q
    ||||||||||||| |||||||||||||||||| |||| ||||||| ||  |||||||| |    || |||| || |||||||||||||||| ||||||||    
T  17801516 atcatatttataatcaaaaaacaactttttagattcattgaataatta--atgtatctagtaacatttataaattagatacattagttattaaatgaacc 17801419  T
Q  292 ----ttaaaagttattttttacttataaatgtgac 322  Q
        | ||||||| |||||| |||||| |||||||    
T  17801418 taattaaaaagttgttttttgcttatagatgtgac 17801384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 39751137 - 39751071
Alignment:
Q  256 atatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgac 322  Q
    ||||||||| || ||||||||| |||| |||||| || ||||||| |||||||||||||||| ||||    
T  39751137 atatatagaccatatacattagatatttaatgaatctaaaaagttgttttttacttataaatatgac 39751071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 3094469 - 3094353
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatataga--tcagatac--attagttattcaatga 288  Q
    |||| ||||||||| |||||| ||||||| ||||||| ||||||||||  ||||| |||   |||||||| |  ||||||||  |||||||||||| |||    
T  3094469 atcacatttataagtaaaaaataacttttaaggttcattgaataacta--atgtacctggtctatatatataagtcagatacatattagttattcagtga 3094372  T
Q  289 accttaaaagttatttttt 307  Q
    |||| ||||||| ||||||    
T  3094371 acctaaaaagttgtttttt 3094353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 333
Target Start/End: Complemental strand, 31498562 - 31498486
Alignment:
Q  257 tatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||||| |||||||||||||||||| ||| || || |||| ||  ||||||||||||||| ||| ||||| |||||    
T  31498562 tatatagttcagatacattagttatttaataaatctaaaaatttgatttttacttataaatatgatcggaatgagta 31498486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 42927059 - 42926991
Alignment:
Q  254 ttatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgac 322  Q
    |||||||||||||| ||||||||||||||||||||| || | |||||  |||||  |||||||| ||||    
T  42927059 ttatatatagatcaaatacattagttattcaatgaatctaagaagttgatttttgtttataaatatgac 42926991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 7143589 - 7143636
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttcctccat 92  Q
    ||||||||||||||||||| ||||||||| |||| ||||||| |||||    
T  7143589 ctactttattacttgttacgatttggtgcacttgtcaatttcatccat 7143636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 7494510 - 7494553
Alignment:
Q  49 tttattacttgttacaatttggtgctcttgccaatttcctccat 92  Q
    ||||||||||||||| ||||||||| |||||||||||| |||||    
T  7494510 tttattacttgttacgatttggtgcacttgccaatttcgtccat 7494553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 39962102 - 39962048
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccg 324  Q
    ||||||||||| |||||| || || ||| |||||||||||||||||||||||||||    
T  39962102 atacattagtt-ttcaataaatctaaaaggttattttttacttataaatgtgaccg 39962048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 2635604 - 2635743
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaacct 292  Q
    |||||||||||| ||||| |||  ||||||||| || | ||||||||||  ||||  ||| |||| ||| || || ||||||||||||||||||| |  |    
T  2635604 tcatatttataaacaaaatacatttttttaggtacattaaataactaat--gtattcgacatataaatatgaccacatacattagttattcaatgtattt 2635701  T
Q  293 taaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
     |||| || |||||||||||||||| ||| || || ||||||    
T  2635702 aaaaaattgttttttacttataaatatgatcgaaatgagtat 2635743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 7307831 - 7307692
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaacct 292  Q
    |||||||| ||| ||||| |||| |||||||||||| ||||| ||||||  |||| ||| | |||  |  ||| | ||||||| ||||||||||||||||    
T  7307831 tcatatttttaaccaaaacacaattttttaggttcattgaatgactaat--gtatttgattcataattgtgattaaatacattcgttattcaatgaacct 7307734  T
Q  293 taaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
     |||| || | |||| ||||||||||||| | ||| ||||||    
T  7307733 aaaaaattgtgttttgcttataaatgtgatcagaatgagtat 7307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 16970362 - 16970312
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaata 243  Q
    ||||||||||||| | |||||| |||||||| ||||| |||||||||||||    
T  16970362 atcatatttataaactaaaaactactttttaagttcattgaataactaata 16970312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 334
Target Start/End: Complemental strand, 18701107 - 18701018
Alignment:
Q  247 atctgacttatatatagatcagatacattagttattcaatgaaccttaaaagttatttttta--cttataaatgtgaccggaaggagtat 334  Q
    ||||||| |||| ||||| | ||| ||||| ||||||||| ||||| ||||||| ||||||   ||| |||||||||||||| |||||||    
T  18701107 atctgacctatacatagaccggatgcattaattattcaataaacctaaaaagttgttttttttgcttgtaaatgtgaccggagggagtat 18701018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 19509393 - 19509348
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatat 244  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||    
T  19509393 atttataagcaaaaaa-aactttttaggtacattgaataactaatat 19509348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 34670414 - 34670348
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    |||||||||| | |||  ||| |||| ||||||| |||||| |||||||||||||||||| ||||||    
T  34670414 agatacattaatgattggatgtacctaaaaagttgttttttgcttataaatgtgaccggagggagta 34670348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 3967832 - 3967795
Alignment:
Q  200 ttataagcaaaaaacaactttttaggttcactgaataa 237  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  3967832 ttataagcaaaaaactactttttaggttcattgaataa 3967795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 4091395 - 4091354
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttc 86  Q
    ||||||||||||||||||| ||||||| | ||||||||||||    
T  4091395 ctactttattacttgttacgatttggtacacttgccaatttc 4091354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 326
Target Start/End: Original strand, 5103682 - 5103795
Alignment:
Q  208 aaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaagttatttttt 307  Q
    |||||| |||||||| |||||| | ||||||||||  || ||| || | |||||||| ||||||||||  |||||| ||||||   ||||||| |||||     
T  5103682 aaaaaataacttttttggttcattcaataactaat--gtctctaacatttatatagaccagatacattgattattcgatgaac---aaaagttgtttttg 5103776  T
Q  308 acttataaatgtgaccgga 326  Q
     ||||||||||||| ||||    
T  5103777 tcttataaatgtgatcgga 5103795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 7307704 - 7307749
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataac 238  Q
    |||| |||||||||||||| |||| |||||||||||| ||||||||    
T  7307704 atcacatttataagcaaaacacaattttttaggttcattgaataac 7307749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 18494604 - 18494563
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttc 86  Q
    |||| |||||||||||||| ||||||||| ||||||||||||    
T  18494604 ctaccttattacttgttacgatttggtgcacttgccaatttc 18494563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 28038545 - 28038468
Alignment:
Q  256 atatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||||||| |||||||||||  ||||||||| |||| |||| |   ||||| ||||||||||||| |||| ||||||    
T  28038545 atatatagaccagatacattatgtattcaatgtacctaaaaaatacatttttgcttataaatgtgatcggatggagta 28038468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 290
Target Start/End: Complemental strand, 34427635 - 34427545
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaac 290  Q
    |||||||||||||||  || |||||| ||||| | |||||||||||  |||||||| ||||||||||    |||||||| ||||| |||||||    
T  34427635 atttataagcaaaaagtaattttttaagttcattcaataactaata--tatctgacctatatatagactgaatacattatttattgaatgaac 34427545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 3374457 - 3374525
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagt-tattttttacttataaatgtgaccggaaggagtatgt 336  Q
    ||||||||  |||| |||||| || |||||| |||||||  ||||||||||||| ||||||||||||||    
T  3374457 atacattaagtattgaatgaatctaaaaagtatatttttatcttataaatgtgatcggaaggagtatgt 3374525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 7857936 - 7857980
Alignment:
Q  115 gaagatgtatatgattcaatttaagatgtgaatcagttgaattgt 159  Q
    |||||||||||||||||||||| |||| |||| |||| |||||||    
T  7857936 gaagatgtatatgattcaattttagatatgaaacagtagaattgt 7857980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 289
Target Start/End: Complemental strand, 12423774 - 12423685
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaa 289  Q
    |||||||||||||||   |||||||||||||| ||||||  ||  |||||| |||| |||||||||| || |||| |||| |||| ||||||    
T  12423774 atttataagcaaaaatgtactttttaggttcattgaatacata--atgtatttgacctatatatagaccaaatacgttagatattgaatgaa 12423685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 226
Target Start/End: Original strand, 34670364 - 34670392
Alignment:
Q  198 atttataagcaaaaaacaactttttaggt 226  Q
    |||||||||||||||||||||||||||||    
T  34670364 atttataagcaaaaaacaactttttaggt 34670392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 35436305 - 35436353
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataa 315  Q
    |||||||| | ||||||||||||||| ||||||  ||||||||||||||    
T  35436305 agatacatcaattattcaatgaacctaaaaagtggttttttacttataa 35436353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 39962108 - 39962144
Alignment:
Q  254 ttatatatagatcagatacattagttattcaatgaac 290  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  39962108 ttatatatagatcagatacgttagttatttaatgaac 39962144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 45981078 - 45981023
Alignment:
Q  261 tagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaat 317  Q
    |||||||||||||| ||||||||||||||  |||||||| | ||||| |||||||||    
T  45981078 tagatcagatacatgagttattcaatgaa-tttaaaagtcaattttttcttataaat 45981023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 47718586 - 47718645
Alignment:
Q  255 tatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataa 315  Q
    ||||||||||||| || ||||||||||||||| || || |||| || ||||||||||||||    
T  47718586 tatatatagatcaaatgcattagttattcaat-aaactaaaaaattgttttttacttataa 47718645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 48138551 - 48138583
Alignment:
Q  117 agatgtatatgattcaatttaagatgtgaatca 149  Q
    ||||||||||||||||||||||||| |||||||    
T  48138551 agatgtatatgattcaatttaagatatgaatca 48138583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 48634250 - 48634182
Alignment:
Q  255 tatatatagatcagatacattagttattcaatgaaccttaaaagt-tattttttacttataaatgtgac 322  Q
    |||||||||| || ||||||||  ||||||||||| || |||||| | ||||||| |||||||||||||    
T  48634250 tatatatagaccaaatacattatgtattcaatgaatctaaaaagtattttttttatttataaatgtgac 48634182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 198 - 333
Target Start/End: Original strand, 7277427 - 7277561
Alignment:
Q  198 atttataagcaaaaaa-caactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaa 296  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||  ||||||||||| |||||||||||||||||| ||||||||||| ||| | |||    
T  7277427 atttataagcaaaaaaacaactttttaggttcattgaataactaat--gtatctgacttttatatagatcagatacatgagttattcaataaacttaaaa 7277524  T
Q  297 agttattttttacttataaatgtgaccggaaggagta 333  Q
    |||  |||||  |||||||||||||| ||| ||||||    
T  7277525 agtcgtttttcgcttataaatgtgactggatggagta 7277561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 198 - 320
Target Start/End: Complemental strand, 7277545 - 7277424
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaa 297  Q
    |||||||||| |||||| |||||||| ||| | ||||||||| ||  ||||||||  |||||| |  |||||||||||||||||||||||||||| ||||    
T  7277545 atttataagcgaaaaacgactttttaagtttattgaataactcat--gtatctgatctatataaaagtcagatacattagttattcaatgaacctaaaaa 7277448  T
Q  298 gtt-attttttacttataaatgtg 320  Q
    |||  |||||| ||||||||||||    
T  7277447 gttgtttttttgcttataaatgtg 7277424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 322
Target Start/End: Complemental strand, 20291916 - 20291788
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatct-gacttatatatagatcagatacattagttattcaatgaacc 291  Q
    ||||||||||||||||||||| |||||||||| || | ||||||||||||  |||||  | | ||  |||||||||||||||||||||||| |||  ||     
T  20291916 atcatatttataagcaaaaaataactttttagatttattgaataactaat--gtatccagtcgtaattatagatcagatacattagttatttaatatact 20291819  T
Q  292 ttaaaagttattttttacttataaatgtgac 322  Q
    | ||||||| |||||| ||||||||||||||    
T  20291818 taaaaagttgttttttgcttataaatgtgac 20291788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 334
Target Start/End: Original strand, 10065077 - 10065212
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaaccttaaa 296  Q
    ||||||||||||||||||||||||||||| ||   ||||| ||  |||||||| ||| ||| ||| | || ||||||||| |||||||||| |||| |||    
T  10065077 atttataagcaaaaaacaactttttaggtacatccaataatta--atgtatctaactcataaatatggtcggatacattaattattcaatgtacctaaaa 10065174  T
Q  297 agttattttttacttataaatgtgaccggaaggagtat 334  Q
    ||| ||||||| |||||||||| ||| ||| |||||||    
T  10065175 agtcattttttgcttataaatgcgactggatggagtat 10065212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 39993123 - 39993180
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    |||||||| |||||||||||| || |||||||||||||||||||||||||||||||||    
T  39993123 atacattaattattcaatgaatctaaaaagttattttttacttataaatgtgaccgga 39993180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 325
Target Start/End: Complemental strand, 6372048 - 6371918
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatat-agatcagatacattagttattcaatgaacct 292  Q
    ||||||||||||||||||||||| ||||||||| || | ||||||||  |||||||| ||  ||| ||   | || |||||||| |||||||||| ||||    
T  6372048 tcatatttataagcaaaaaacaattttttaggtacatttaataacta--atgtatctaacccataaatgtaaccatatacattaattattcaatgtacct 6371951  T
Q  293 taaaagttattttttacttataaatgtgaccgg 325  Q
     |||||| ||||||| |||||||||| ||||||    
T  6371950 aaaaagtcattttttgcttataaatgggaccgg 6371918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 335
Target Start/End: Original strand, 38562137 - 38562273
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaaccttaaa 296  Q
    |||||||||||||||||||||| |||| | || ||||||| ||||  |||| || | |||| ||  || | ||||||||| |||||||||| | || |||    
T  38562137 atttataagcaaaaaacaacttgttagatacattgaataattaat--gtatatgtcctataaatgtgaccggatacattaattattcaatgtatctaaaa 38562234  T
Q  297 agttattttttacttataaatgtgaccggaaggagtatg 335  Q
    | || |||||| |||||||||||||||||| ||||||||    
T  38562235 aattgttttttgcttataaatgtgaccggagggagtatg 38562273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 198 - 334
Target Start/End: Complemental strand, 10065195 - 10065060
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgact-tatatatagatcagatacattagttattcaatgaaccttaaa 296  Q
    ||||||||||||||||  ||||||||||| || ||||||| ||||  ||||| |||  ||| |||   | |||||||||| |||||  ||| |||| |||    
T  10065195 atttataagcaaaaaatgactttttaggtacattgaataattaat--gtatccgaccatatttatgagttagatacattaattattggatgtacctaaaa 10065098  T
Q  297 agttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||| |||||| |||||||||||||||||| |||||||    
T  10065097 agttgttttttgcttataaatgtgaccggagggagtat 10065060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 198 - 326
Target Start/End: Original strand, 20291793 - 20291920
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaaccttaaa 296  Q
    |||||||||||||||||||||||||| ||  | | ||||||||||  ||||||||  ||||  || ||   ||||||||||||||||||| || || |||    
T  20291793 atttataagcaaaaaacaactttttaagtatattaaataactaat--gtatctgatctataattacgactggatacattagttattcaataaatctaaaa 20291890  T
Q  297 agttattttttacttataaatgtgaccgga 326  Q
    ||||||||||| ||||||||| ||| ||||    
T  20291891 agttattttttgcttataaatatgatcgga 20291920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 198 - 326
Target Start/End: Complemental strand, 23673485 - 23673359
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaaccttaaa 296  Q
    |||||||||||||||| ||||||||||||  | ||||||| ||||  ||||||||| |||||||  || || |||||||| |||||| ||| |  | |||    
T  23673485 atttataagcaaaaaataactttttaggtatattgaataattaat--gtatctgacatatatatgtgaccaaatacattaattattcgatgtat-taaaa 23673389  T
Q  297 agttattttttacttataaatgtgaccgga 326  Q
    ||||||||||| |||||||||| |||||||    
T  23673388 agttattttttgcttataaatgcgaccgga 23673359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 322
Target Start/End: Original strand, 23673424 - 23673490
Alignment:
Q  256 atatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgac 322  Q
    |||||||  |||||||||||| |||||||||  |||| |||||||||||||| ||||||||||||||    
T  23673424 atatatatgtcagatacattaattattcaatatacctaaaaagttattttttgcttataaatgtgac 23673490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 208 - 334
Target Start/End: Original strand, 22235281 - 22235406
Alignment:
Q  208 aaaaaacaactttttaggttcactgaataactaatatgtatctga-cttatatatagatcagatacattagttattcaatgaaccttaaaagttattttt 306  Q
    |||||||||||||||||||||  ||||||| | ||||  || ||| |||  ||||| | ||||||||| |||||||||||||| || ||| || ||||||    
T  22235281 aaaaaacaactttttaggttctttgaataattgatat--atttgatctttaatataaaccagatacatcagttattcaatgaatctaaaatgtgattttt 22235378  T
Q  307 tacttataaatgtgaccggaaggagtat 334  Q
    | |||||||  ||||||||| |||||||    
T  22235379 tgcttataatagtgaccggagggagtat 22235406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 334
Target Start/End: Original strand, 6371994 - 6372061
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||||||||||||||| |||| |||| |||| || |||||| ||||||||| |||| |||||||||||    
T  6371994 agatacattagttattaaatgtacctaaaaaattgttttttgcttataaatatgactggaaggagtat 6372061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 333
Target Start/End: Original strand, 8679022 - 8679089
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagtta-ttttttacttataaatgtgaccggaaggagta 333  Q
    ||||||||||| ||||||||| |||| |||| ||| |||||| |||||||||||||||||| ||||||    
T  8679022 agatacattaggtattcaatgtacctaaaaaattatttttttgcttataaatgtgaccggagggagta 8679089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 333
Target Start/End: Original strand, 22048895 - 22048961
Alignment:
Q  266 cagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    |||||||||||| ||||||||||||| ||||||||  ||||||||||||| | |||||||| ||||||    
T  22048895 cagatacattagctattcaatgaacc-taaaagttgatttttacttataactatgaccggagggagta 22048961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 334
Target Start/End: Complemental strand, 52840329 - 52840262
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||||||||| ||||| |||| || | |||| ||||||||| |||||||||||||||||| |||||||    
T  52840329 agatacattaattatttaatgtacttaaaaaattattttttgcttataaatgtgaccggagggagtat 52840262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 20783754 - 20783696
Alignment:
Q  263 gatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtga 321  Q
    |||||||||||||| |||||||||| || | |||||| |||||||| ||||||||||||    
T  20783754 gatcagatacattaattattcaatgtacttaaaaagtcattttttatttataaatgtga 20783696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 20717954 - 20717995
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttc 86  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  20717954 ctactttattacttgttacgatttggtgcacttgccaatttc 20717995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 333
Target Start/End: Complemental strand, 32125471 - 32125333
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttat-atatagatcagatacattagttattcaatgaacct 292  Q
    ||||||||||||||||||| | |||||||||||||| |||||| |||  |||||| ||   ||| ||||| | ||  |||||||  |||||||||||||     
T  32125471 tcatatttataagcaaaaatctactttttaggttcattgaatatcta--atgtatgtggtctataatatataccaagtacattaagtattcaatgaacca 32125374  T
Q  293 taaaagttattttttacttataaatgtgaccggaaggagta 333  Q
     ||||||    |||| ||||||||| |||||||||||||||    
T  32125373 aaaaagtagcgttttgcttataaatatgaccggaaggagta 32125333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 33508666 - 33508526
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacct 292  Q
    |||| |||||||||||||| ||||||| |||| |||| |||||||||||| | |||    | || || || | || || |||||||||||||||| ||||    
T  33508666 atcacatttataagcaaaacacaacttgttagattcattgaataactaatgtatatggttcatacatgta-accaaatccattagttattcaatgtacct 33508568  T
Q  293 taaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
     |||| || |||||| |||||||||||| | | |||||||||    
T  33508567 aaaaaattgttttttgcttataaatgtgtctgaaaggagtat 33508526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 21861105 - 21861169
Alignment:
Q  243 atgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaagttatttttt 307  Q
    ||||||||||||| |||||||| ||||||||||| ||||| |||||| || || | |||||||||    
T  21861105 atgtatctgacttttatatagaccagatacattaattatttaatgaatctaaataattatttttt 21861169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 21916968 - 21917032
Alignment:
Q  243 atgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaagttatttttt 307  Q
    ||||||||||||| |||||||| ||||||||||| ||||| |||||| || || | |||||||||    
T  21916968 atgtatctgacttttatatagaccagatacattaattatttaatgaatctaaataattatttttt 21917032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 333
Target Start/End: Original strand, 23614456 - 23614520
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||||||| | |||||||||||| ||||||  |||||| ||||||||||| |||| ||||||||    
T  23614456 atacattaggtgttcaatgaacctaaaaagtggttttttgcttataaatgtaaccgaaaggagta 23614520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 33508543 - 33508587
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    ||||||||||||||||||| ||||||||| || ||||||||||||    
T  33508543 atttataagcaaaaaacaattttttaggtacattgaataactaat 33508587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 335
Target Start/End: Complemental strand, 19876465 - 19876430
Alignment:
Q  300 tattttttacttataaatgtgaccggaaggagtatg 335  Q
    ||||||||||||||||||||||| ||||||||||||    
T  19876465 tattttttacttataaatgtgactggaaggagtatg 19876430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 23614410 - 23614449
Alignment:
Q  195 catatttataagcaaaaaacaactttttaggttcactgaa 234  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  23614410 catatttataagcaaaaaaccactttttaggttcattgaa 23614449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 32125409 - 32125476
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    |||||| || ||||||||| |||||||||||||| ||||||   ||||| ||||||||| ||||||||    
T  32125409 tatagaccacatacattagatattcaatgaacctaaaaagtagatttttgcttataaatatgaccgga 32125476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 149
Target Start/End: Complemental strand, 43770639 - 43770604
Alignment:
Q  114 tgaagatgtatatgattcaatttaagatgtgaatca 149  Q
    |||||||||||||||||||||||||||| |||||||    
T  43770639 tgaagatgtatatgattcaatttaagatatgaatca 43770604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 10450347 - 10450301
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttcctcca 91  Q
    ||||||||||| ||||||| ||||||||| |||||||||||| ||||    
T  10450347 ctactttattatttgttacgatttggtgcacttgccaatttcatcca 10450301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 24654178 - 24654144
Alignment:
Q  302 ttttttacttataaatgtgaccggaaggagtatgt 336  Q
    |||||| ||||||||||||||||||||||||||||    
T  24654178 ttttttgcttataaatgtgaccggaaggagtatgt 24654144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 321
Target Start/End: Original strand, 30920780 - 30920842
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtga 321  Q
    ||||||| | ||| |||||||||||||| ||| | |||| ||||||||| |||||||||||||    
T  30920780 tatagataaaatatattagttattcaataaacttaaaaaattattttttgcttataaatgtga 30920842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 223
Target Start/End: Original strand, 33004177 - 33004207
Alignment:
Q  193 atcatatttataagcaaaaaacaacttttta 223  Q
    |||||||||||||||||||||||||||||||    
T  33004177 atcatatttataagcaaaaaacaacttttta 33004207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 334
Target Start/End: Complemental strand, 38562255 - 38562120
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctga-cttatatatagatcagatacattagttattcaatgaaccttaaa 296  Q
    ||||||||||||||||||| ||||||| | || ||||||| ||||  ||||| |  |  || |||||  || |||||||| |||||||||| | || | |    
T  38562255 atttataagcaaaaaacaattttttagatacattgaataattaat--gtatccggtcacatttataggacatatacattaattattcaatgtatctaaca 38562158  T
Q  297 agttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||| |||||| |||||||||||||||| | |||||||    
T  38562157 agttgttttttgcttataaatgtgaccgaagggagtat 38562120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 54919025 - 54919079
Alignment:
Q  268 gatacattagttattcaatgaaccttaaaagtta-ttttttacttataaatgtga 321  Q
    |||||||||||||||||||| || | |||||| | ||||||||||||||||||||    
T  54919025 gatacattagttattcaatgtacttaaaaagtcatttttttacttataaatgtga 54919079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 55579984 - 55579918
Alignment:
Q  94 acaatgttataagaatgtagtgaagatgtatatgattcaatttaagatgtgaatcagttgaattgtc 160  Q
    |||||||||| | ||| ||||| ||||| |||||||||||||||| |||||| | ||||||| ||||    
T  55579984 acaatgttatcataatttagtggagatgcatatgattcaatttaatatgtgagtaagttgaaatgtc 55579918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 334
Target Start/End: Original strand, 53225729 - 53225794
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||||||| |||||||||||| || |||||| | ||||| |||||||||  ||||||| |||||||    
T  53225729 atacattaattattcaatgaatctaaaaagtcaattttttcttataaataggaccggagggagtat 53225794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 56257416 - 56257473
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    |||||| |||||||||||||| || |||||| | |||||||||||||  |||||||||    
T  56257416 atacatgagttattcaatgaatctaaaaagtaactttttacttataatagtgaccgga 56257473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 23614504 - 23614468
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaa 234  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  23614504 atttataagcaaaaaaccactttttaggttcattgaa 23614468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 33508613 - 33508665
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtga 321  Q
    ||||||||||||||||||||| || | ||||| | |||| |||||||||||||    
T  33508613 atacattagttattcaatgaatctaacaagttgtgttttgcttataaatgtga 33508665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 337
Target Start/End: Original strand, 35755027 - 35755164
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacctt 293  Q
    |||||||||||||  |||||| | |||||||||| | |||||| |||||  |||| ||| ||||||    |||| ||||||| | |||||||||||| |     
T  35755027 tcatatttataag--aaaaactattttttaggttaattgaatatctaat--gtatttgatttatatt---atcaaatacatttggtattcaatgaacata 35755119  T
Q  294 aaaagttattttttacttataaatgtgacc-ggaaggagtatgtt 337  Q
     ||||| |||||||  |||||||||||||| ||| ||||||||||    
T  35755120 taaagtaattttttgtttataaatgtgaccaggagggagtatgtt 35755164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 48601216 - 48601111
Alignment:
Q  218 tttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaagtta-ttttttacttataaa 316  Q
    ||||||| |||| |||||||||||| |  ||  || ||| |||||| |||||||||||||||||||||| ||  | |||| ||| ||||||  |||||||    
T  48601216 tttttagattcattgaataactaattt--attcgatttacatataggtcagatacattagttattcaataaatataaaaaattagttttttgtttataaa 48601119  T
Q  317 tgtgaccg 324  Q
    ||||||||    
T  48601118 tgtgaccg 48601111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 7e-28; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 193 - 327
Target Start/End: Original strand, 29853170 - 29853302
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacct 292  Q
    |||| ||||||||||||||   ||| ||||||||||| | ||||||||||  ||||||||||||||||||||||  |||||||| ||||| ||||||| |    
T  29853170 atcacatttataagcaaaatgtaacattttaggttcattcaataactaat--gtatctgacttatatatagatcgaatacattatttattaaatgaacat 29853267  T
Q  293 taaaagttattttttacttataaatgtgaccggaa 327  Q
     |||||||| ||||||||||||||| |||||||||    
T  29853268 aaaaagttaatttttacttataaatatgaccggaa 29853302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 198 - 334
Target Start/End: Complemental strand, 24419662 - 24419527
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaaccttaaa 296  Q
    ||||||||||||||||||||||||||||| || ||||||| ||||  ||||||||||||||  || ||   |||||||||||| ||||||||| || |||    
T  24419662 atttataagcaaaaaacaactttttaggtacattgaataattaat--gtatctgacttataattatgactggatacattagttcttcaatgaatctaaaa 24419565  T
Q  297 agttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||| |||||| |||||||||||||||||| |||||||    
T  24419564 agttcttttttgcttataaatgtgaccggagggagtat 24419527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 198 - 333
Target Start/End: Original strand, 24419544 - 24419678
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatct-gacttatatatagatcagatacattagttattcaatgaaccttaaa 296  Q
    |||||||||||||||| |||||||||| |||| |||| |||||||  |||||  | | ||  ||||  |||||||||||| |||||||||| |||| |||    
T  24419544 atttataagcaaaaaagaactttttagattcattgaagaactaat--gtatccagtcataattataagtcagatacattaattattcaatgtacctaaaa 24419641  T
Q  297 agttattttttacttataaatgtgaccggaaggagta 333  Q
    |||| |||||| |||||||||||||||||||||||||    
T  24419642 agttgttttttgcttataaatgtgaccggaaggagta 24419678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 334
Target Start/End: Original strand, 8174101 - 8174241
Alignment:
Q  193 atcatatttataagcaaaaaa-caactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacc 291  Q
    |||| |||||||||||||||| ||| |||||||||||| |||||| ||| |  ||||| || || |||||||| ||||||||||| | ||||||||||      
T  8174101 atcacatttataagcaaaaaaacaattttttaggttcattgaatatctatt--gtatccgatttttatatagaccagatacattaatcattcaatgaata 8174198  T
Q  292 ttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    | ||||||| | |||| |||||||||||||||||| |||||||    
T  8174199 taaaaagttgtgttttgcttataaatgtgaccggagggagtat 8174241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 202 - 317
Target Start/End: Complemental strand, 47154774 - 47154662
Alignment:
Q  202 ataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaagtta 301  Q
    |||||||||||||||||||||||||||| | ||||| ||||  ||||||| | ||||||||||   |||||| | ||||||||||||| | |||||||||    
T  47154774 ataagcaaaaaacaactttttaggttcatttaataaataat--gtatctggcctatatatagactggatacagtggttattcaatgaatcataaaagtta 47154677  T
Q  302 ttttttacttataaat 317  Q
    |||||| |||||||||    
T  47154676 tttttt-cttataaat 47154662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 882985 - 882930
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccg 324  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  882985 atacattagttattcaatgaacctaaaaagttatattttacttataaatgtgaccg 882930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 14231179 - 14231048
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaacct 292  Q
    ||||||||||||| |||| ||||| ||||||||||| ||||||||||||  |||||||   ||||  |  ||| | |||||||| | ||||||||||| |    
T  14231179 tcatatttataaggaaaacacaacattttaggttcattgaataactaat--gtatctggtctataattgtgattaaatacattaatcattcaatgaacgt 14231082  T
Q  293 taaaagttattttttacttataaatgtgaccgga 326  Q
     |||||||||||||| ||||||||||||||||||    
T  14231081 aaaaagttattttttgcttataaatgtgaccgga 14231048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 333
Target Start/End: Original strand, 35489208 - 35489342
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatag-atcagatacattagttattcaatgaaccttaaa 296  Q
    |||||||| |||||||||||||||||| | || ||||||| ||||  |||||| || |||| |||  | ||||| ||||| |||||||||| || | |||    
T  35489208 atttataatcaaaaaacaactttttagatacattgaataattaat--gtatctaacctataaatatcaccagattcattaattattcaatgtacataaaa 35489305  T
Q  297 agttattttttacttataaatgtgaccggaaggagta 333  Q
    ||| ||||||| |||||||||||||||||| ||||||    
T  35489306 agtcattttttgcttataaatgtgaccggagggagta 35489342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 333
Target Start/End: Complemental strand, 29853296 - 29853159
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacctt 293  Q
    ||||||||||||| |||||  ||||||||| ||||| | ||||| ||||  ||||  ||  ||||||||  |||||||||||||||||| |||||||||     
T  29853296 tcatatttataagtaaaaattaactttttatgttcatttaataaataat--gtattcgatctatatataagtcagatacattagttattgaatgaaccta 29853199  T
Q  294 aaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||| ||||  |||| ||||||||||||| |||| ||||||    
T  29853198 aaatgttacattttgcttataaatgtgatcggagggagta 29853159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 322
Target Start/End: Original strand, 51171263 - 51171390
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatca-gatacattagttattcaatgaacct 292  Q
    |||||||||||||||||||||||||||||||||  | || |||| ||||    ||||||| ||||  ||   || | ||||||||||||| ||||||| |    
T  51171263 tcatatttataagcaaaaaacaactttttaggtatattgtataattaatta--atctgacctataattatgacacggtacattagttatttaatgaactt 51171360  T
Q  293 taaaagttattttttacttataaatgtgac 322  Q
     |||||||||||||||||||||||||||||    
T  51171361 aaaaagttattttttacttataaatgtgac 51171390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 200 - 315
Target Start/End: Complemental strand, 25554670 - 25554556
Alignment:
Q  200 ttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttata-tatagatcagatacattagttattcaatgaaccttaaaag 298  Q
    |||||||||||||||||||||||||| ||| | ||||||| ||  |||| || | |||| |||| |||| |||||| | |||||||||||| || |||||    
T  25554670 ttataagcaaaaaacaactttttaggctcattaaataactgat--gtatttggcctatagtatatatcacatacatcatttattcaatgaatctaaaaag 25554573  T
Q  299 ttattttttacttataa 315  Q
    ||||||||| |||||||    
T  25554572 ttattttttgcttataa 25554556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 334
Target Start/End: Complemental strand, 8900855 - 8900788
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||||||||| |||||||||| |||| ||||||| ||| ||||||||||||||||||| | |||||||    
T  8900855 agatacattaattattcaatgtacctaaaaagttgtttattacttataaatgtgaccgaatggagtat 8900788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 8900805 - 8900925
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaaccttaaa 296  Q
    ||||||||| || |||||||||||||||| || ||||||| ||||  |||||| || |||| ||  || | ||||||||| |||||||||  |||| |||    
T  8900805 atttataagtaataaacaactttttaggtacattgaataattaat--gtatctaacctataaatgtgaccggatacattaattattcaatatacctaaaa 8900902  T
Q  297 agttattttttacttataaatgt 319  Q
    ||| |||||||||||||||||||    
T  8900903 agtaattttttacttataaatgt 8900925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 47154716 - 47154787
Alignment:
Q  255 tatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    |||||||||  ||||||||||| ||||| ||||||||| ||||||| |||||| ||||| ||||||||||||    
T  47154716 tatatataggccagatacattatttattaaatgaacctaaaaagttgttttttgcttattaatgtgaccgga 47154787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 334
Target Start/End: Original strand, 457640 - 457718
Alignment:
Q  256 atatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    ||||||||| || ||||||||  |||||||||||||| ||||||   ||||| |||||||||||||||||| |||||||    
T  457640 atatatagaccaaatacattatgtattcaatgaacctaaaaagtgcatttttgcttataaatgtgaccggagggagtat 457718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 14231117 - 14231191
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    |||||| ||||||||||||||||||||||||||| ||| ||| | |||| ||||||||| |||| ||| ||||||    
T  14231117 tatagaccagatacattagttattcaatgaacctaaaatgttgtgttttccttataaatatgacgggagggagta 14231191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 334
Target Start/End: Complemental strand, 30412669 - 30412591
Alignment:
Q  256 atatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    ||||||||| || ||||||||  |||||||||||||| ||||||   ||||| |||||||||||||||||| |||||||    
T  30412669 atatatagaccaaatacattatgtattcaatgaacctaaaaagtgcatttttgcttataaatgtgaccggagggagtat 30412591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 334
Target Start/End: Original strand, 31032457 - 31032588
Alignment:
Q  202 ataagcaaaaaacaactttttaggttcactgaataactaatatgtatct-gacttatatatagatcagatacattagttattcaatgaaccttaaaagtt 300  Q
    ||||||||||||||||||||||| ||||   ||||| ||||  |||||| | |  || |||||| || |||||||||||||| ||||||||| |||| ||    
T  31032457 ataagcaaaaaacaactttttagattcatgaaataattaat--gtatctagtcacatttatagaccaaatacattagttatttaatgaacctaaaaaatt 31032554  T
Q  301 attttttacttataaatgtgaccggaaggagtat 334  Q
       |||| |||||||||||||||||| |||||||    
T  31032555 gagttttgcttataaatgtgaccggatggagtat 31032588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 334
Target Start/End: Complemental strand, 457701 - 457567
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaa 297  Q
    |||||||||||||||   |||||||||||||| ||||||  ||||  |||| ||   ||||||| || || ||||||||  |||| |||||| |  ||||    
T  457701 atttataagcaaaaatgcactttttaggttcattgaatacataat--gtatttggtctatatattgaccaaatacattaaatattgaatgaatcaaaaaa 457604  T
Q  298 gttattttttacttataaatgtgaccggaaggagtat 334  Q
    || ||||||| |||||||||||||||||| |||||||    
T  457603 gtgattttttgcttataaatgtgaccggagggagtat 457567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 334
Target Start/End: Complemental strand, 9676025 - 9675960
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||||||| ||||| ||||||||| |||||||| |||||||||||||  ||||||||| |||||||    
T  9676025 atacattatttattaaatgaacctaaaaagttaatttttacttataatagtgaccggagggagtat 9675960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 334
Target Start/End: Original strand, 38636283 - 38636348
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||||||||||||||||| || || ||||||| |||||| ||| |||||||||||||| |||||||    
T  38636283 atacattagttattcaatcaatctaaaaagttgttttttgcttttaaatgtgaccggagggagtat 38636348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 336
Target Start/End: Complemental strand, 8174224 - 8174087
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaa 297  Q
    |||||||||||||| |||||||||||  |||| ||||| | ||  |||||||||   |||||| | ||| |||||| ||| |||||||||||||| ||||    
T  8174224 atttataagcaaaacacaactttttatattcattgaatgatta--atgtatctggtctatataaaaatcggatacaatagatattcaatgaacctaaaaa 8174127  T
Q  298 gtt-attttttacttataaatgtgaccggaaggagtatgt 336  Q
     ||  |||||| ||||||||||||| | || |||||||||    
T  8174126 attgtttttttgcttataaatgtgatcagagggagtatgt 8174087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 21945117 - 21945065
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtga 321  Q
    ||||||||| ||||||||||| || |||||| |||||||||||||||||||||    
T  21945117 atacattaggtattcaatgaatctaaaaagtgattttttacttataaatgtga 21945065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 42074225 - 42074285
Alignment:
Q  280 attcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtatgttttt 340  Q
    ||||||||||||| |||| |  |||||| ||||||||||||||||||||||||| ||||||    
T  42074225 attcaatgaacctaaaaaatagttttttgcttataaatgtgaccggaaggagtacgttttt 42074285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 1442141 - 1442069
Alignment:
Q  218 tttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacct 292  Q
    |||||| ||||| | ||||| ||||||  ||| ||| |||||||||||||||||||||||||||||||| |||||    
T  1442141 tttttaagttcattaaataattaatat--atccgacctatatatagatcagatacattagttattcaataaacct 1442069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 1610033 - 1609966
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    ||||| |||||||||||| |||||||||| | || ||||||| |||||| ||||||||||||| ||||    
T  1610033 tataggtcagatacattaattattcaatgtatctaaaaagttgttttttgcttataaatgtgatcgga 1609966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 4604919 - 4604974
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccg 324  Q
    ||||||||| |||||||| ||||| |||||| ||||||| ||||||||||||||||    
T  4604919 atacattaggtattcaataaacctaaaaagtgattttttgcttataaatgtgaccg 4604974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 334
Target Start/End: Original strand, 34890200 - 34890332
Alignment:
Q  201 tataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatat-agatcagatacattagttattcaatgaaccttaaaagt 299  Q
    |||||||||||||||||||||||| | || |||||||||||||  ||||| || |||| ||   | | ||||||||| |||||||||||| || |||       
T  34890200 tataagcaaaaaacaactttttagatacattgaataactaata--tatctaacatataaatgtaaccggatacattaattattcaatgaatctaaaatag 34890297  T
Q  300 tattttttacttataaatgtgaccggaaggagtat 334  Q
    |||||||| ||||||||||| | |||| |||||||    
T  34890298 tatttttttcttataaatgtaatcggagggagtat 34890332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 334
Target Start/End: Original strand, 47084635 - 47084710
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    ||||||||| ||||||||||||||| |||||||| |||| |||| ||||  |||||||||| | |||||| |||||    
T  47084635 tatagatcaaatacattagttattctatgaacctaaaaaattatgttttgtttataaatgtaatcggaagaagtat 47084710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 334
Target Start/End: Original strand, 49166687 - 49166754
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||||||||| |||||||||| | || ||||||| |||||| ||||||||||||||| || |||||||    
T  49166687 agatacattaattattcaatgtaactaaaaagttgttttttgcttataaatgtgaccagagggagtat 49166754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 38758371 - 38758445
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||||||||||||||  ||||||| |||||||| ||||||  |||||| |||||||  ||||||||| ||||||    
T  38758371 tatagatcagatacatcggttattccatgaacctaaaaagtgtttttttgcttataatagtgaccggagggagta 38758445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 340
Target Start/End: Original strand, 5700105 - 5700186
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtatgttttt 340  Q
    ||||||||| || ||||| |||||||||| || | ||||||| |||||| ||||||||||||||  || | |||||||||||    
T  5700105 tatagatcaaatgcattaattattcaatgtacttaaaaagttgttttttgcttataaatgtgactagatgaagtatgttttt 5700186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 321
Target Start/End: Original strand, 11016597 - 11016722
Alignment:
Q  194 tcatatttataagcaaaaaa-caactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacct 292  Q
    |||||||||||||||||||| |||||||| ||||| | | |||||| ||   |||||||   ||||||  ||||| |||||||||||||||||| |||||    
T  11016597 tcatatttataagcaaaaaaacaactttt-aggtttattaaataacaaag--gtatctggtctatataatgatcatatacattagttattcaataaacct 11016693  T
Q  293 taaaagttattttttacttataaatgtga 321  Q
     |||||||  |||||  ||||||||||||    
T  11016694 aaaaagttgatttttgtttataaatgtga 11016722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 15241175 - 15241114
Alignment:
Q  279 tattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtatgttttt 340  Q
    |||||||||||||| |||| |  |||||| |||||||||||||| ||| |||||||||||||    
T  15241175 tattcaatgaacctaaaaaatacttttttgcttataaatgtgactggagggagtatgttttt 15241114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 267 - 336
Target Start/End: Complemental strand, 35489258 - 35489189
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtatgt 336  Q
    |||||||||| |||||||||| | || ||||||| ||||||  ||||||||||||||||| ||| |||||    
T  35489258 agatacattaattattcaatgtatctaaaaagttgttttttgattataaatgtgaccggagggaatatgt 35489189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 47911922 - 47911845
Alignment:
Q  256 atatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||||||| || ||||||||  |||||||||||||| ||||||   |||||  ||||||||||||||||| ||||||    
T  47911922 atatatagaccaaatacattatgtattcaatgaacctaaaaagtgcatttttgtttataaatgtgaccggagggagta 47911845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 291
Target Start/End: Complemental strand, 9938514 - 9938466
Alignment:
Q  243 atgtatctgacttatatatagatcagatacattagttattcaatgaacc 291  Q
    |||||| |||||||| ||| ||||||||||||||||||||||| |||||    
T  9938514 atgtatttgacttatttattgatcagatacattagttattcaacgaacc 9938466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 315
Target Start/End: Original strand, 10325314 - 10325410
Alignment:
Q  216 actttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataa 315  Q
    |||||||||||||| |||||||||  ||||||| ||   ||||| || | ||||||||||||||||| ||||||  | |||||||||||||| |||||||    
T  10325314 actttttaggttcattgaataact--tatgtatttgctctatat-tacaccagatacattagttatttaatgaatataaaaagttattttttccttataa 10325410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 323
Target Start/End: Complemental strand, 11016723 - 11016595
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacct 292  Q
    |||| |||||||| |||||| |||||||||||||| | ||||||||||  |||||| |||    |||||||| ||||||| || |||||| ||| ||||     
T  11016723 atcacatttataaacaaaaatcaactttttaggtttattgaataacta--atgtatatgatcattatatagaccagatacctttgttatttaataaacc- 11016627  T
Q  293 taaaagtt-attttttacttataaatgtgacc 323  Q
    ||||||||  |||||| ||||||||| |||||    
T  11016626 taaaagttgtttttttgcttataaatatgacc 11016595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 14240854 - 14240806
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    |||||||||||||||||  ||||| ||||||||||| ||||||||||||    
T  14240854 tcatatttataagcaaagcacaacattttaggttcattgaataactaat 14240806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 29370803 - 29370767
Alignment:
Q  122 tatatgattcaatttaagatgtgaatcagttgaattg 158  Q
    |||||||||||||||||||||||||| ||||||||||    
T  29370803 tatatgattcaatttaagatgtgaattagttgaattg 29370767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 331
Target Start/End: Complemental strand, 34890247 - 34890183
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggag 331  Q
    ||||| ||||||||||||||| | || ||||||| |||||| |||||| ||||||||||| ||||    
T  34890247 agatatattagttattcaatgtatctaaaaagttgttttttgcttatatatgtgaccggatggag 34890183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 38636278 - 38636222
Alignment:
Q  279 tattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtatg 335  Q
    ||||||||||| || ||||||| |||||| |||||||||||||| ||| ||||||||    
T  38636278 tattcaatgaatctaaaaagttgttttttgcttataaatgtgacaggagggagtatg 38636222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 199 - 242
Target Start/End: Original strand, 10332049 - 10332092
Alignment:
Q  199 tttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    |||||||||||||||||||||||||  |||| ||||||||||||    
T  10332049 tttataagcaaaaaacaactttttaaattcaatgaataactaat 10332092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 34522139 - 34522182
Alignment:
Q  49 tttattacttgttacaatttggtgctcttgccaatttcctccat 92  Q
    ||||||||||||||| ||||||||| |||||||||||| |||||    
T  34522139 tttattacttgttacgatttggtgcacttgccaatttcttccat 34522182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 50048261 - 50048308
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttcctccat 92  Q
    |||||||||||||||||| |||||| ||| |||||||||||| |||||    
T  50048261 ctactttattacttgttataatttgatgcacttgccaatttcgtccat 50048308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 1609970 - 1610033
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttata 258  Q
    |||| ||||||||||||||||||||||||||| | || ||||||| ||  ||||||||||| ||||    
T  1609970 atcacatttataagcaaaaaacaactttttagatacattgaataatta--atgtatctgacctata 1610033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 27634403 - 27634293
Alignment:
Q  195 catatttataagcaaaaaacaactt-tttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacctt 293  Q
    |||||||||||| |||||| ||||| ||||  |||| |||||||||||| |  || ||||| |||||| || | | |||||||| |||||||| |||||     
T  27634403 catatttataagtaaaaaataacttctttaacttcattgaataactaatct--atttgactaatatattgaccgg-tacattagatattcaattaaccta 27634307  T
Q  294 aaaagttatttttt 307  Q
    ||||||||||||||    
T  27634306 aaaagttatttttt 27634293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 31032503 - 31032437
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    |||||||||| |||||  ||||| || ||||||| |||||| ||||| |||||||||||| ||||||    
T  31032503 agatacattaattatttcatgaatctaaaaagttgttttttgcttattaatgtgaccggagggagta 31032437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 38636240 - 38636278
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaata 236  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  38636240 atttataagcaaaaaacaactttttagattcattgaata 38636278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 1226741 - 1226794
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagtta-ttttttacttataaatgtga 321  Q
    |||||||||||||||||||||| | |||| ||| |||||| |||||||||||||    
T  1226741 atacattagttattcaatgaacttaaaaaattatttttttgcttataaatgtga 1226794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 334
Target Start/End: Original strand, 1610031 - 1610095
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||||||| |||||||||| | |  ||||||| |||| |||||||||||||||||||| |||||||    
T  1610031 atacattaattattcaatgtatcgaaaaagttgtttt-tacttataaatgtgaccggatggagtat 1610095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 4540693 - 4540616
Alignment:
Q  256 atatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||||||| |  ||||||||  ||||||||||||||  |||||   ||||| |||||||||||||||||| ||||||    
T  4540693 atatatagaccgaatacattatatattcaatgaacctataaagtacatttttgcttataaatgtgaccggagggagta 4540616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 334
Target Start/End: Original strand, 5091751 - 5091816
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||||||||||||||||||||||| ||| ||  ||||||  ||||||  |||||| ||||||||||    
T  5091751 atacattagttattcaatgaacctaaaaggtagttttttgtttataatagtgacctgaaggagtat 5091816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 334
Target Start/End: Complemental strand, 5368810 - 5368769
Alignment:
Q  293 taaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    ||||||||||||||| ||||||||||||| |||| |||||||    
T  5368810 taaaagttattttttgcttataaatgtgatcggagggagtat 5368769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 17836838 - 17836789
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttcctccatta 94  Q
    ||||||| ||||||||||  ||||||||| |||||||||||| |||||||    
T  17836838 ctactttcttacttgttatgatttggtgcacttgccaatttcgtccatta 17836789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Original strand, 36618822 - 36618851
Alignment:
Q  194 tcatatttataagcaaaaaacaacttttta 223  Q
    ||||||||||||||||||||||||||||||    
T  36618822 tcatatttataagcaaaaaacaacttttta 36618851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 323
Target Start/End: Original strand, 37247678 - 37247707
Alignment:
Q  294 aaaagttattttttacttataaatgtgacc 323  Q
    ||||||||||||||||||||||||||||||    
T  37247678 aaaagttattttttacttataaatgtgacc 37247707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 37925784 - 37925833
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    ||||||||||||| ||||||| || |||||| ||||| ||||||||||||    
T  37925784 atcatatttataaacaaaaaagaattttttatgttcattgaataactaat 37925833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 44661840 - 44661787
Alignment:
Q  255 tatatatagatcagatacattagttattcaatgaaccttaaaagttatttttta 308  Q
    ||||||||| | |||||||||||||||||||||||| | |||| || |||||||    
T  44661840 tatatataggtaagatacattagttattcaatgaacttaaaaaattgtttttta 44661787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 46508206 - 46508157
Alignment:
Q  266 cagatacattagttattcaatgaaccttaaaagttattttttacttataa 315  Q
    ||||||||| |||||||||||||| || ||||||| |||||| |||||||    
T  46508206 cagatacataagttattcaatgaatctgaaaagtttttttttgcttataa 46508157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 50403161 - 50403096
Alignment:
Q  257 tatatagatcagatacattagttattcaatgaaccttaaaagttat-tttttacttataaatgtga 321  Q
    |||||||| ||||||||||||||||||||| ||  | ||||||| | ||||| |||||||||||||    
T  50403161 tatatagaccagatacattagttattcaataaatttaaaaagttgtgtttttgcttataaatgtga 50403096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 882937 - 882981
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    ||||||||| |||| | ||||||||||||||| ||||||||||||    
T  882937 atttataagtaaaatataactttttaggttcattgaataactaat 882981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 5700163 - 5700119
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    |||||||||||||||||||||||||| || || ||||||| ||||    
T  5700163 atttataagcaaaaaacaactttttaagtacattgaataattaat 5700119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 9697404 - 9697352
Alignment:
Q  111 tagtgaagatgtatatgattcaatttaagatgtgaatcagttgaattgtctct 163  Q
    ||||| |||| ||||||| ||||||||||||||| || ||||||| |||||||    
T  9697404 tagtggagatatatatgactcaatttaagatgtggataagttgaactgtctct 9697352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 299
Target Start/End: Complemental strand, 10325410 - 10325314
Alignment:
Q  200 ttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaagt 299  Q
    ||||||| |||||| |||||||||  |||| | ||||||||||  |||||||   || ||||||| || |||||| ||||||||||||||||| ||||||    
T  10325410 ttataaggaaaaaataactttttatattcattaaataactaat--gtatctggtgta-atatagagcaaatacataagttattcaatgaacctaaaaagt 10325314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 337
Target Start/End: Original strand, 38173511 - 38173567
Alignment:
Q  281 ttcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtatgtt 337  Q
    |||||||||||| |||| |  |||||| |||||||||||||| ||| ||||||||||    
T  38173511 ttcaatgaacctaaaaaatacttttttgcttataaatgtgactggatggagtatgtt 38173567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 38636331 - 38636287
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    ||||| ||||||||||||||||||||| || | ||||||||||||    
T  38636331 atttaaaagcaaaaaacaactttttagattgattgaataactaat 38636287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 226
Target Start/End: Original strand, 41944781 - 41944809
Alignment:
Q  198 atttataagcaaaaaacaactttttaggt 226  Q
    |||||||||||||||||||||||||||||    
T  41944781 atttataagcaaaaaacaactttttaggt 41944809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 149
Target Start/End: Complemental strand, 46594297 - 46594265
Alignment:
Q  117 agatgtatatgattcaatttaagatgtgaatca 149  Q
    ||||||||||||||||||||||||| |||||||    
T  46594297 agatgtatatgattcaatttaagatatgaatca 46594265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 49166737 - 49166693
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    ||||||||||||||||||||||||||| | || ||||||| ||||    
T  49166737 atttataagcaaaaaacaactttttagttacattgaataattaat 49166693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 50105729 - 50105677
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttactt 311  Q
    |||||||||||||||||  |||||||||||| || |||| ||| |||||||||    
T  50105729 tatagatcagatacattgattattcaatgaatctaaaaaattaatttttactt 50105677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 50692145 - 50692077
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttatttttta-cttataaatgtgaccggaaggagtatgt 336  Q
    ||||||||| |||| ||||||||| ||||||  ||||||  |||||||||||||||||| | |||||||    
T  50692145 atacattaggtatttaatgaacctaaaaagtagtttttttgcttataaatgtgaccggaggaagtatgt 50692077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 50709580 - 50709612
Alignment:
Q  117 agatgtatatgattcaatttaagatgtgaatca 149  Q
    ||||||||||||||||||||||||| |||||||    
T  50709580 agatgtatatgattcaatttaagatatgaatca 50709612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 192 - 317
Target Start/End: Complemental strand, 35464087 - 35463964
Alignment:
Q  192 tatcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacc 291  Q
    ||||||||||||||||||||  |||||||||||||||  ||| || |||||  |||||| || |||||||||| | ||||||||||||||||||||||||    
T  35464087 tatcatatttataagcaaaaggcaactttttaggttctttgagtagctaat--gtatctaacatatatatagaccggatacattagttattcaatgaacc 35463990  T
Q  292 ttaaaagttattttttacttataaat 317  Q
    | |||| ||||||||| |||||||||    
T  35463989 taaaaaattattttttgcttataaat 35463964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 194 - 323
Target Start/End: Complemental strand, 16829331 - 16829208
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacctt 293  Q
    ||||||||||||||||||||    ||||||||||||  |||||||||||  ||||||||| | |||||| |  ||||||||||| |||||||||||| |     
T  16829331 tcatatttataagcaaaaaat---tttttaggttcatcgaataactaat--gtatctgacctttatataaactagatacattagatattcaatgaactta 16829237  T
Q  294 aaaagttattttttacttataaatgtgacc 323  Q
    ||||||||| |||| |||||||||||||||    
T  16829236 aaaagttat-ttttgcttataaatgtgacc 16829208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 334
Target Start/End: Complemental strand, 28499842 - 28499776
Alignment:
Q  268 gatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||||||||||||||||||||| || |||| ||||||||| |||||||||||||||||| |||||||    
T  28499842 gatacattagttattcaatgaatctaaaaaattattttttgcttataaatgtgaccggagggagtat 28499776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 324
Target Start/End: Complemental strand, 39231926 - 39231797
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttata-tatagatcagatacattagttattcaatgaacct 292  Q
    |||||||||||| |||||||| | |||||||||||| | |||| | |||  |||| ||  ||||| |||| | || ||||||||  ||||||||||||||    
T  39231926 tcatatttataaacaaaaaactattttttaggttcatttaatatcaaat--gtatttggtttataatatataccaaatacattacgtattcaatgaacct 39231829  T
Q  293 taaaagttattttttacttataaatgtgaccg 324  Q
    ||||||| |||||||| |||||||||||||||    
T  39231828 taaaagtaattttttatttataaatgtgaccg 39231797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 1249239 - 1249110
Alignment:
Q  196 atatttataagcaaaaaacaacttttt-aggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacctta 294  Q
    ||||||||||||||||||||| ||||| || || | |||||||||||| | | | || | ||| |||| |||||||||||||| |||| ||||||||| |    
T  1249239 atatttataagcaaaaaacaatttttttagatttattgaataactaatgtatgt-tgtcatatttataaatcagatacattagctatttaatgaacctaa 1249141  T
Q  295 aaagttattttttacttataaatgtgaccgga 326  Q
    |||||| |||||| ||||||||||||| ||||    
T  1249140 aaagttgtttttt-cttataaatgtgagcgga 1249110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 198 - 335
Target Start/End: Original strand, 7065596 - 7065732
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaaccttaaa 296  Q
    |||||||| ||||||| |||||||||| | || ||||||||||||  | ||| ||| |||| ||  |||||||||||||| ||||||||||||  | |||    
T  7065596 atttataaacaaaaaagaactttttagatacattgaataactaat--gcatcagacatataaatgtgatcagatacattaattattcaatgaatttaaaa 7065693  T
Q  297 agttattttttacttataaatgtgaccggaaggagtatg 335  Q
    ||||  ||||| |||||||||||||| |||| |||||||    
T  7065694 agttgatttttgcttataaatgtgactggaaagagtatg 7065732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 269 - 340
Target Start/End: Complemental strand, 40773028 - 40772957
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtatgttttt 340  Q
    ||||||||  |||| ||||||||| |||| || ||||||||||||||||||||||||| |||||||||||||    
T  40773028 atacattaagtattaaatgaacctaaaaaattgttttttacttataaatgtgaccggagggagtatgttttt 40772957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 333
Target Start/End: Original strand, 16829214 - 16829343
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaa 297  Q
    |||||||||||||||  ||||||||| ||||| |||||| |||||  ||||||   ||||||| || ||||||||||||||||||| |||||||| ||||    
T  16829214 atttataagcaaaaat-aactttttaagttcattgaatatctaat--gtatctagtttatataaaggtcagatacattagttattcgatgaacctaaaaa 16829310  T
Q  298 gttattttttacttataaatgtgaccggaaggagta 333  Q
       ||||||| ||||||||| ||||| || ||||||    
T  16829311 ---attttttgcttataaatatgaccagagggagta 16829343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 326
Target Start/End: Original strand, 28351002 - 28351082
Alignment:
Q  246 tatctgacttatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    ||||| || |||| ||||| | |||||||||||||||||||||| || ||||||| |||||| ||||||||| ||||||||    
T  28351002 tatctaacctataaatagaccggatacattagttattcaatgaatctaaaaagttgttttttgcttataaatatgaccgga 28351082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 28351077 - 28351029
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  28351077 tcatatttataagcaaaaaacaactttttagattcattgaataactaat 28351029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 196 - 317
Target Start/End: Original strand, 35463962 - 35464081
Alignment:
Q  196 atatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaa 295  Q
    |||||||||||||||||| || |||||||||||| ||||||||||  ||||||| |   ||||||||  | ||||||||||| || |||| |||||| ||    
T  35463962 atatttataagcaaaaaataattttttaggttcattgaataacta--atgtatccggtctatatatatgttagatacattagctactcaaagaacctaaa 35464059  T
Q  296 aagttattttttacttataaat 317  Q
    |||||   |||| |||||||||    
T  35464060 aagttgccttttgcttataaat 35464081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 333
Target Start/End: Original strand, 8850331 - 8850408
Alignment:
Q  256 atatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||||||| || ||||||||  |||||||||||||| ||||||   ||||||||||||||||||| |||| ||||||    
T  8850331 atatatagaccaaatacattatgtattcaatgaacctaaaaagtacatttttacttataaatgtgatcggagggagta 8850408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 17768074 - 17768155
Alignment:
Q  255 tatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtatgt 336  Q
    |||||||||| || ||||||||  |||||||||||||| |||| | ||||||| |||||| ||||||||||| ||| |||||    
T  17768074 tatatatagaccaaatacattatgtattcaatgaacctaaaaaataattttttgcttatatatgtgaccggagggaatatgt 17768155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 24404882 - 24404806
Alignment:
Q  245 gtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtga 321  Q
    ||||||||  ||||||||| |||||||| ||||||||||||| || |  ||||||| |||||||||| |||||||||    
T  24404882 gtatctgatctatatataggtcagatacgttagttattcaataaatcgaaaaagttgttttttacttgtaaatgtga 24404806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 332
Target Start/End: Original strand, 28499793 - 28499925
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctga-cttatatatagatcagatacattagttattcaatgaaccttaaa 296  Q
    |||||||||||||||| || ||||||| |||| ||||||||||||  ||||| |  | ||  ||||||| | |||||||| |||||||||  | || |||    
T  28499793 atttataagcaaaaaataattttttagattcattgaataactaat--gtatccggtcataattatagattaaatacattaattattcaatatatctaaaa 28499890  T
Q  297 agttattttttacttataaatgtgaccggaaggagt 332  Q
    ||||||||||| ||||||||||||| |||| |||||    
T  28499891 agttatttttt-cttataaatgtgatcggatggagt 28499925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 12645414 - 12645493
Alignment:
Q  254 ttatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||||||||| || ||||||||  |||||||||||| | ||||||  |||||| |||||| ||||||||||| ||||||    
T  12645414 ttatatatagaccaaatacattatgtattcaatgaacttaaaaagtatttttttgcttatatatgtgaccggatggagta 12645493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 14751216 - 14751270
Alignment:
Q  279 tattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||||||| |||| ||||||| |||||| |||||||||||||||||| ||||||    
T  14751216 tattcaatgtacctaaaaagttgttttttgcttataaatgtgaccggagggagta 14751270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 18200726 - 18200668
Alignment:
Q  263 gatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtga 321  Q
    |||||||||||||||||||||||| ||| | |||| ||| ||||| |||||||||||||    
T  18200726 gatcagatacattagttattcaataaacttaaaaaattaatttttgcttataaatgtga 18200668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 18551044 - 18550982
Alignment:
Q  261 tagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgacc 323  Q
    ||||||| ||||||||||||||||||||| || || |||| | |||| |||||||||||||||    
T  18551044 tagatcaaatacattagttattcaatgaatctaaacagttgtgttttgcttataaatgtgacc 18550982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 323
Target Start/End: Original strand, 34445273 - 34445396
Alignment:
Q  199 tttataagcaaaaaacaactttttaggttcactgaataactaatatgtatct-gacttatatatagatcagatacattagttattcaatgaaccttaaaa 297  Q
    |||||||||||||||||||||||||||||||  |||||| ||  | |||||| | |  || || ||| || |||||||||||||||||| || || ||||    
T  34445273 tttataagcaaaaaacaactttttaggttcatggaataatta--aggtatctagtcacatttagagaccaaatacattagttattcaataaatctaaaaa 34445370  T
Q  298 gttattttttacttataaatgtgacc 323  Q
    ||| |  ||| |||||||||||||||    
T  34445371 gttgtgatttgcttataaatgtgacc 34445396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 266 - 331
Target Start/End: Original strand, 32741390 - 32741455
Alignment:
Q  266 cagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggag 331  Q
    |||||||| || ||||| ||||||||| |||| ||||||||| ||||||||||||| |||| ||||    
T  32741390 cagatacaataattatttaatgaacctaaaaaattattttttgcttataaatgtgatcggatggag 32741455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 326
Target Start/End: Original strand, 3733763 - 3733842
Alignment:
Q  246 tatctgacttatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    |||||||  |||||| |||||| ||||||| | ||||||||||| || |||||||||||||| || || ||||||||||||    
T  3733763 tatctgatctatataaagatcaaatacattggatattcaatgaatctaaaaagttatttttt-ctcattaatgtgaccgga 3733842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 11273733 - 11273693
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaattt 85  Q
    ||||||||||||||||||||||||| ||| |||||||||||    
T  11273733 ctactttattacttgttacaatttgatgcacttgccaattt 11273693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 272
Target Start/End: Original strand, 24404805 - 24404882
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatac 272  Q
    |||| ||||| ||| ||||||||||||||| | || | |||||||||||   ||||||||| ||||||||||||||||||    
T  24404805 atcacatttacaagtaaaaaacaactttttcgatttattgaataactaac--gtatctgacctatatatagatcagatac 24404882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 41930392 - 41930328
Alignment:
Q  257 tatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtga 321  Q
    |||||||||||||||||||| || |||||||||||| |||  || |||||||  |||||||||||    
T  41930392 tatatagatcagatacattaattgttcaatgaacctaaaagattgttttttaagtataaatgtga 41930328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 43221642 - 43221694
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtga 321  Q
    |||||||| || |||||| ||||| |||||||||||||| |||||||||||||    
T  43221642 atacattaatttttcaataaacctaaaaagttattttttgcttataaatgtga 43221694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 5865931 - 5865986
Alignment:
Q  278 ttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||||||||||||| ||||  | |||||| |||||||||||||||||| ||||||    
T  5865931 ttattcaatgaacctaaaaatgtgttttttgcttataaatgtgaccggagggagta 5865986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 326
Target Start/End: Original strand, 14509831 - 14509959
Alignment:
Q  198 atttataagcaaaaaa-caactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaaccttaa 295  Q
    |||||||||||||||| |||||||||| || || | ||||| ||||  |||| | ||| ||| ||| |||  ||||||||| |||||||||  | || ||    
T  14509831 atttataagcaaaaaaacaactttttaagtacattcaataattaat--gtatttaactcataaatatgattggatacattaattattcaatatatctaaa 14509928  T
Q  296 aagttattttttacttataaatgtgaccgga 326  Q
    || |||||||||| |||||||||||||||||    
T  14509929 aaattattttttatttataaatgtgaccgga 14509959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 323
Target Start/End: Original strand, 19087845 - 19087912
Alignment:
Q  256 atatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgacc 323  Q
    ||||||||| || ||||||||  |||||||||||||| ||||||   ||||| |||||||||||||||    
T  19087845 atatatagaccaaatacattatgtattcaatgaacctaaaaagtacatttttgcttataaatgtgacc 19087912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 40773043 - 40773110
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    |||||| || ||||||||| | || ||||||||| ||||||  |||||| ||||||||||||||||||    
T  40773043 tatagaccaaatacattaggtgttgaatgaacctaaaaagtggttttttgcttataaatgtgaccgga 40773110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 286
Target Start/End: Original strand, 1249119 - 1249205
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaat 286  Q
    ||||||||| |||||||||||||||||||||| | |||| |||  |||||||||| ||||| ||| ||  | ||||||||||||||||||    
T  1249119 atttataag-aaaaaacaactttttaggttcattaaatagcta--atgtatctgatttataaatatgacaacatacattagttattcaat 1249205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 11089378 - 11089428
Alignment:
Q  273 attagttattcaatgaaccttaaaagttattttttacttataaatgtgacc 323  Q
    |||| |||||| |||||| | |||| |||||||||||||||||||||||||    
T  11089378 attaattattcgatgaacttaaaaaattattttttacttataaatgtgacc 11089428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 14751254 - 14751216
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaata 236  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  14751254 atttataagcaaaaaacaactttttaggtacattgaata 14751216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 15474466 - 15474420
Alignment:
Q  279 tattcaatgaaccttaaaagttattttttacttataaatgtgaccgg 325  Q
    ||||||||| | || |||||||||||||| |||||||||||||||||    
T  15474466 tattcaatgtatctaaaaagttatttttttcttataaatgtgaccgg 15474420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 35458176 - 35458130
Alignment:
Q  278 ttattcaatgaaccttaaaagttattttttacttataaatgtgaccg 324  Q
    ||||||||||||| | |||||||| ||||| ||||||||||||||||    
T  35458176 ttattcaatgaacttaaaaagttaatttttccttataaatgtgaccg 35458130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 5354761 - 5354798
Alignment:
Q  199 tttataagcaaaaaacaactttttaggttcactgaata 236  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  5354761 tttataagcaaaaaactactttttaggttcaatgaata 5354798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 6266219 - 6266288
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagt-tattttttacttataaatgtgaccggaaggagtatgtt 337  Q
    ||||||||  |||||||| ||||| |||| | | |||||| |||||||||||||||||| ||||||||||    
T  6266219 atacattaagtattcaataaacctaaaaattgttttttttgcttataaatgtgaccggagggagtatgtt 6266288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 151
Target Start/End: Original strand, 12118360 - 12118397
Alignment:
Q  114 tgaagatgtatatgattcaatttaagatgtgaatcagt 151  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  12118360 tgaaaatgtatatgattcaatttaagatatgaatcagt 12118397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 26502061 - 26502024
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaa 82  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  26502061 ctactttattacttgttacagtttggtgcacttgccaa 26502024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 30046387 - 30046452
Alignment:
Q  268 gatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||||||| |||||||||| | || ||| || ||||||| ||||||||||| ||||||| |||||    
T  30046387 gatacattaattattcaatgtatctaaaatgtgattttttgcttataaatgtaaccggaatgagta 30046452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 37514242 - 37514295
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgac 322  Q
    ||||||||||||||||||||| || |||||||| ||||| | ||||| ||||||    
T  37514242 atacattagttattcaatgaatctgaaaagttaatttttgcatataattgtgac 37514295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 18550988 - 18551032
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    |||||||||||||| |||||| ||||| |||| ||||||||||||    
T  18550988 atttataagcaaaacacaactgtttagattcattgaataactaat 18551032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 33366344 - 33366304
Alignment:
Q  196 atatttataagcaaaaaacaactttttaggttcactgaata 236  Q
    |||||||||||||||| || |||||||||||| ||||||||    
T  33366344 atatttataagcaaaatactactttttaggttgactgaata 33366304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 35458208 - 35458264
Alignment:
Q  270 tacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    ||||||||| ||||||| ||||| || ||||| ||||| |||||| |||||||||||    
T  35458208 tacattagtcattcaataaacctaaatagttactttttgcttatatatgtgaccgga 35458264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 42990735 - 42990767
Alignment:
Q  117 agatgtatatgattcaatttaagatgtgaatca 149  Q
    ||||||||||||||||||||||||| |||||||    
T  42990735 agatgtatatgattcaatttaagatatgaatca 42990767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 7e-25; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 198 - 323
Target Start/End: Original strand, 30429080 - 30429202
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaa 297  Q
    |||||||||||||||||||||||||||||||| | ||||| ||  ||||||||||| | ||||||||  |||||||||||||||||||| ||||| || |    
T  30429080 atttataagcaaaaaacaactttttaggttcattcaataatta--atgtatctgacctttatatagactagatacattagttattcaataaacctaaaca 30429177  T
Q  298 gttattttttacttataaatgtgacc 323  Q
     || |||||| |||||||||||||||    
T  30429178 att-ttttttgcttataaatgtgacc 30429202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 198 - 326
Target Start/End: Original strand, 41221641 - 41221767
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaa 297  Q
    ||||||| | |||||| |||||||| | |||| | ||||| ||||  |||||||||||  ||||||| | ||||||||||||||||||||||||| ||||    
T  41221641 atttataggtaaaaaaaaactttttggattcatttaataattaat--gtatctgactttcatatagaccggatacattagttattcaatgaacctaaaaa 41221738  T
Q  298 gttattttttacttataaatgtgaccgga 326  Q
     ||||||||||||||||||| ||||||||    
T  41221739 tttattttttacttataaatatgaccgga 41221767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 27279613 - 27279489
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaacct 292  Q
    |||||||||||||||||||||||||||||| ||       |||| ||||  ||||||||| ||||  || |||| |||||||||||||||||||||||||    
T  27279613 tcatatttataagcaaaaaacaactttttaagt-------ataattaat--gtatctgacctataattatgatcggatacattagttattcaatgaacct 27279523  T
Q  293 taaaagttattttttacttataaatgtgaccgga 326  Q
     |||| ||||||||| ||||||||||||||||||    
T  27279522 aaaaaattattttttgcttataaatgtgaccgga 27279489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 198 - 333
Target Start/End: Complemental strand, 30429196 - 30429064
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaa 297  Q
    |||||||||||||||| || | |||||||| | ||||||||||||  ||||||    |||||| || |||||||||||| ||||| ||||||||| ||||    
T  30429196 atttataagcaaaaaa-aattgtttaggtttattgaataactaat--gtatctagtctatataaaggtcagatacattaattattgaatgaacctaaaaa 30429100  T
Q  298 gttattttttacttataaatgtgaccggaaggagta 333  Q
    ||| |||||| |||||||||||||||||| ||||||    
T  30429099 gttgttttttgcttataaatgtgaccggagggagta 30429064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 41221762 - 41221624
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacctt 293  Q
    ||||||||||||| |||||| || |||||||||||| ||||||||||||  ||||| |   |||||  |  |||||||||||| ||||| |||||| |      
T  41221762 tcatatttataagtaaaaaataaatttttaggttcattgaataactaat--gtatccggtctatatgaaagtcagatacattaattattaaatgaatcca 41221665  T
Q  294 aaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    ||||||| |||||||| |||||||||| |||||||||||||    
T  41221664 aaaagtttttttttacctataaatgtgtccggaaggagtat 41221624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 333
Target Start/End: Complemental strand, 472539 - 472407
Alignment:
Q  200 ttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaaccttaaaag 298  Q
    |||||||||||| |||| |||||||||| | ||||||||||||||  || ||   |||| ||| || || |||||||||||||||||| ||||| |||||    
T  472539 ttataagcaaaacacaattttttaggttaattgaataactaatat--atttggtctataaatatgaccaaatacattagttattcaataaacctaaaaag 472442  T
Q  299 ttattttttacttataaatgtgaccggaaggagta 333  Q
    |||| ||||  ||||||||||||||||| ||||||    
T  472441 ttatattttgtttataaatgtgaccggagggagta 472407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 41517439 - 41517510
Alignment:
Q  263 gatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||| ||||||||| |||||||||| || | |||||||||||||| |||||||||||||||||| |||||||    
T  41517439 gatcggatacattaattattcaatgtacttaaaaagttattttttgcttataaatgtgaccggagggagtat 41517510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 644097 - 644188
Alignment:
Q  255 tatatatagatcagatacattagttattcaatgaaccttaaaag-------ttattttttacttataaatgtgaccggaaggagtatgtttt 339  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||       |||||||||||||||||||||||||| ||| ||||| ||||    
T  644097 tatatataggtcatatacattagttattcaatgaacctaaaaagttagtttttattttttacttataaatgtgaccgcaagaagtatatttt 644188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 9733546 - 9733611
Alignment:
Q  268 gatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||||||||||||||||||||||| |||| || ||||||  ||||||||||||||||| ||||||    
T  9733546 gatacattagttattcaatgaacctaaaaaattgttttttgtttataaatgtgaccggagggagta 9733611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 31719254 - 31719186
Alignment:
Q  255 tatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgacc 323  Q
    |||||||||  || ||||||| ||||||||||||| || ||||||| ||||||||||||||||||||||    
T  31719254 tatatatagtccaaatacatttgttattcaatgaatctaaaaagttgttttttacttataaatgtgacc 31719186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 333
Target Start/End: Complemental strand, 37287230 - 37287166
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||||||  |||||||||||||||||||||  ||| |||||||||||||||||||| |||||||    
T  37287230 atacattatgtattcaatgaaccttaaaagtattttgttacttataaatgtgaccggtaggagta 37287166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 11565070 - 11564996
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    |||||||||| ||||||| |||||||||| | || ||| ||| |||||| |||||||||||||||||| ||||||    
T  11565070 tatagatcaggtacattaattattcaatgtatctaaaatgttgttttttgcttataaatgtgaccggagggagta 11564996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 333
Target Start/End: Original strand, 472423 - 472557
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctga-cttatatatagatcagatacattagttattcaatgaaccttaaa 296  Q
    |||||||| ||||| | ||||||||||||| | ||||||||||||  |||| ||  | ||| |||||| || ||| |||||||||||||| ||||| |||    
T  472423 atttataaacaaaatataactttttaggtttattgaataactaat--gtatttggtcatatttatagaccaaatatattagttattcaattaacctaaaa 472520  T
Q  297 agttattttttacttataaatgtgaccggaaggagta 333  Q
    | || | |||| ||||||| |||||||||| ||||||    
T  472521 aattgtgttttgcttataattgtgaccggatggagta 472557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 324
Target Start/End: Original strand, 25997323 - 25997453
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatat-agatcagatacattagttattcaatgaacc 291  Q
    |||||||||||||||||||   || |||||| ||||| ||||||||||  |||||||||| ||||| ||  ||||| ||| |||| | ||||||| ||||    
T  25997323 atcatatttataagcaaaatgtaattttttatgttcattgaataacta--atgtatctgatttatagatgtgatcatatatattaatcattcaataaacc 25997420  T
Q  292 ttaaaagttattttttacttataaatgtgaccg 324  Q
    | |||| ||  |||||| |||||||||||||||    
T  25997421 taaaaaattggtttttatttataaatgtgaccg 25997453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 29168513 - 29168638
Alignment:
Q  200 ttataagcaaaaaacaactttttaggttcactgaataactaatatgtatct-gacttatatatagatcagatacattagttattcaatgaaccttaaaag 298  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||   |||| | |  || ||||  | |||||||||| ||||| |||| |  | |||||    
T  29168513 ttataagtaaaaaacaactttttaggttcaacgaataactaata--catctggtcacatttataagtaagatacattaattatttaatgtatttaaaaag 29168610  T
Q  299 ttattttttacttataaatgtgaccgga 326  Q
    ||||||||| ||||||||||||||||||    
T  29168611 ttattttttgcttataaatgtgaccgga 29168638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 11021127 - 11021201
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||| ||||||||||||||||| |||||||  | ||||||| |||||  |||||||||||||||| | ||||||    
T  11021127 tataggtcagatacattagttatccaatgaaaataaaaagttgtttttcccttataaatgtgaccgtagggagta 11021201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 326
Target Start/End: Complemental strand, 29168629 - 29168502
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaaccttaaa 296  Q
    |||||||||||||||| |||||||||  | || | ||||| ||||  |||||| ||||||| ||  || |||||  |||||||||||  ||||||| |||    
T  29168629 atttataagcaaaaaataactttttaaatacattaaataattaat--gtatcttacttataaatgtgaccagatgtattagttattcgttgaacctaaaa 29168532  T
Q  297 agttattttttacttataaatgtgaccgga 326  Q
    |||| |||||||||||||| ||||| ||||    
T  29168531 agttgttttttacttataactgtgatcgga 29168502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 32516205 - 32516279
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    |||||| || |||||||| ||||||||||||  | |||| || | ||||||||||||||||||| ||||||||||    
T  32516205 tatagaccaaatacattaattattcaatgaatttaaaaaattgtgttttacttataaatgtgacaggaaggagta 32516279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 336
Target Start/End: Complemental strand, 11021185 - 11021047
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatat-agatcagatacattagttattcaatgaaccttaa- 295  Q
    |||||||||  |||||||||||||||  |||| || |||||||  ||||||||||| |||| ||  ||  ||||||||||  |||||||||||||| ||     
T  11021185 atttataagggaaaaacaactttttattttcattggataacta--atgtatctgacctataaatgtgaatagatacattaactattcaatgaacctaaat 11021088  T
Q  296 aagttattttttacttataaatgtgaccggaaggagtatgt 336  Q
    ||||  ||||||  |||||||||||| |||| |||||||||    
T  11021087 aagtgtttttttgtttataaatgtgatcggagggagtatgt 11021047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 151
Target Start/End: Complemental strand, 16496868 - 16496831
Alignment:
Q  114 tgaagatgtatatgattcaatttaagatgtgaatcagt 151  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  16496868 tgaagatgtatatgattcaattttagatgtgaatcagt 16496831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 22352082 - 22352131
Alignment:
Q  258 atatagatcagatacattagttattcaatgaaccttaaaagttatttttt 307  Q
    ||||| ||||||||||||||||||||||| |||||||||| ||| |||||    
T  22352082 atataaatcagatacattagttattcaataaaccttaaaaattagttttt 22352131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 9733542 - 9733474
Alignment:
Q  265 tcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    |||||||||||| | || ||||| |||| |||| || |||||| |||||||||||||||||| ||||||    
T  9733542 tcagatacattaatcatccaatgcacctaaaaaattgttttttgcttataaatgtgaccggagggagta 9733474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 9733595 - 9733551
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    |||||||| |||||||||| |||||||||||| ||||||||||||    
T  9733595 atttataaacaaaaaacaattttttaggttcattgaataactaat 9733551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 27279498 - 27279542
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    |||||||||||||||| || |||||||||||| ||||||||||||    
T  27279498 atttataagcaaaaaataattttttaggttcattgaataactaat 27279542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 32965716 - 32965784
Alignment:
Q  255 tatatatagatcagatacattagttattcaatg-aaccttaaaagttattttttacttataaatgtgac 322  Q
    |||||||||  || ||||||||||||||||||| || || |||||||  ||||||||||||||||||||    
T  32965716 tatatataggccaaatacattagttattcaatgaaatctaaaaagttggtttttacttataaatgtgac 32965784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 333
Target Start/End: Original strand, 33853837 - 33853974
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacctt 293  Q
    |||||||||||| ||||||   |||||||||||||| ||||||  ||||  |||| ||  |||||||| || || ||| ||||  |||| |||||| ||     
T  33853837 tcatatttataaacaaaaatgtactttttaggttcattgaatacataat--gtatttggtttatatattgaccaaataaattaagtattgaatgaatctg 33853934  T
Q  294 aaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||||  |||||| ||||||||||||| |||| ||||||    
T  33853935 aaaagtgcttttttgcttataaatgtgatcggagggagta 33853974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 1358686 - 1358745
Alignment:
Q  263 gatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgac 322  Q
    |||||||||||| | |||||||||||| || |||  |||||||||| |||||||||||||    
T  1358686 gatcagatacataaattattcaatgaatctaaaatattattttttagttataaatgtgac 1358745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 12488073 - 12488136
Alignment:
Q  270 tacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||||||||| ||||||||||| |||| || |||||| ||| ||||||||||| || ||||||    
T  12488073 tacattagttactcaatgaacctaaaaaattgttttttgcttgtaaatgtgaccagagggagta 12488136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 31000619 - 31000666
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttcctccat 92  Q
    ||||||||||||||||||||||||| ||| ||||| |||||| |||||    
T  31000619 ctactttattacttgttacaatttgatgcacttgcaaatttcgtccat 31000666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 4860324 - 4860278
Alignment:
Q  243 atgtatctgacttatatatagatcagatacattagttattcaatgaa 289  Q
    |||||||||  ||||||||||| ||||||||| ||||||||||||||    
T  4860324 atgtatctggtttatatatagaccagatacatcagttattcaatgaa 4860278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 25931643 - 25931689
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttatttt 305  Q
    ||||||||| ||||||| |||||||||||||||| ||||||| ||||    
T  25931643 tatagatcaaatacattggttattcaatgaacctaaaaagttgtttt 25931689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 25997386 - 25997328
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaat 317  Q
    |||| ||||||||||||||||||||||||||| | |||| |||  |||| |||||||||    
T  25997386 tataaatcagatacattagttattcaatgaacataaaaaattacattttgcttataaat 25997328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 334
Target Start/End: Original strand, 34360834 - 34360912
Alignment:
Q  256 atatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||||||||||| |||||||   |||||||||||||| ||||||   ||||||||||||||| ||| | || |||||||    
T  34360834 atatatagatcaaatacattgtatattcaatgaacctaaaaagtacatttttacttataaatatgatcagatggagtat 34360912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 41824326 - 41824404
Alignment:
Q  254 ttatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagt 332  Q
    ||||||||||| || |||||| | ||||| ||||||||| |||||| | ||||||||||||   ||||||||| |||||    
T  41824326 ttatatatagaccacatacatcatttattgaatgaacctaaaaagtcaatttttacttatagtagtgaccggagggagt 41824404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 12488052 - 12487995
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    |||||||||||| ||||||||||| |||| || |||| | ||| ||||||||||||||    
T  12488052 atacattagttactcaatgaacctaaaaaattgttttctgcttgtaaatgtgaccgga 12487995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 23143499 - 23143536
Alignment:
Q  200 ttataagcaaaaaacaactttttaggttcactgaataa 237  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  23143499 ttataagcaaaaatcaactttttaggttcacttaataa 23143536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 23555289 - 23555326
Alignment:
Q  200 ttataagcaaaaaacaactttttaggttcactgaataa 237  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  23555289 ttataagcaaaaatcaactttttaggttcacttaataa 23555326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Original strand, 33956365 - 33956422
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccg 324  Q
    |||||||||| |||||||||  | || |||| ||||||||| ||||||||||||||||    
T  33956365 agatacattaattattcaatatatctaaaaatttatttttttcttataaatgtgaccg 33956422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 34090221 - 34090266
Alignment:
Q  199 tttataagcaaaaaacaactttttaggttcactgaataactaatat 244  Q
    |||||||||||||||||  |||||||||||| ||||| ||||||||    
T  34090221 tttataagcaaaaaacatatttttaggttcattgaatgactaatat 34090266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 40363232 - 40363269
Alignment:
Q  200 ttataagcaaaaaacaactttttaggttcactgaataa 237  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  40363232 ttataagcaaaaaactactttttaggttcattgaataa 40363269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 12488120 - 12488076
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    ||||| ||||||||||||| |||||||||||| ||| ||||||||    
T  12488120 atttacaagcaaaaaacaattttttaggttcattgagtaactaat 12488076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 24318791 - 24318747
Alignment:
Q  48 ctttattacttgttacaatttggtgctcttgccaatttcctccat 92  Q
    |||||||| ||||||||||||||||| ||| |||||||| |||||    
T  24318791 ctttattaattgttacaatttggtgcactttccaatttcgtccat 24318747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 28936089 - 28936145
Alignment:
Q  270 tacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    ||||| ||||| |||||||||||||||||| ||||||| |||| ||  |||||||||    
T  28936089 tacatcagttactcaatgaaccttaaaagtgattttttgcttaaaatagtgaccgga 28936145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 31719192 - 31719232
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataac 238  Q
    ||||||||| ||||||||||||||||| |||| ||||||||    
T  31719192 atttataagtaaaaaacaactttttagattcattgaataac 31719232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 42818915 - 42818967
Alignment:
Q  263 gatcagatacattagttattcaatgaaccttaaaagttattttttacttataa 315  Q
    |||||||||||| ||||||||||||||||| |||  ||||||||  |||||||    
T  42818915 gatcagatacatcagttattcaatgaacctaaaacattatttttctcttataa 42818967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 198 - 333
Target Start/End: Original strand, 26331229 - 26331361
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaa 297  Q
    ||||||||||||||||||| ||| |||||||| ||||| ||||||  |||||||   |||||||||| || | ||||||||  |||||||||||| ||||    
T  26331229 atttataagcaaaaaacaattttctaggttcattgaatgactaat--gtatctggtctatatatagaccaaa-acattagtctttcaatgaacctaaaaa 26331325  T
Q  298 gttattttttacttataaatgtgaccggaaggagta 333  Q
    ||| |||||| |||||||||||||||||| ||||||    
T  26331326 gttgttttttgcttataaatgtgaccggagggagta 26331361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 198 - 337
Target Start/End: Original strand, 55121185 - 55121323
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaaccttaaa 296  Q
    |||||||| |||||||||| |||||||||||| ||||||||||||  |||| ||  ||||| ||  || || |||||||| ||||| ||| || || |||    
T  55121185 atttataaacaaaaaacaattttttaggttcattgaataactaat--gtatttggtttataaatgtgaccaaatacattaattatttaataaatctaaaa 55121282  T
Q  297 agttattttttacttataaatgtgaccggaaggagtatgtt 337  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  55121283 agttattttttgcttataaatgtgactggaaggagtatgtt 55121323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 198 - 332
Target Start/End: Complemental strand, 26331345 - 26331214
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaa 297  Q
    |||||||||||||||||||||||||||||||| ||||  |||||| | |   ||   |||||||||| ||||||||||||| |||||||||||||  |||    
T  26331345 atttataagcaaaaaacaactttttaggttcattgaaagactaatgttt---tggtctatatatagaccagatacattagtcattcaatgaacctagaaa 26331249  T
Q  298 gttattttttacttataaatgtgaccggaaggagt 332  Q
     || |||||| ||||||||||||||| ||| ||||    
T  26331248 attgttttttgcttataaatgtgaccagaaagagt 26331214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 198 - 336
Target Start/End: Original strand, 27786467 - 27786604
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttata-tatagatcagatacattagttattcaatgaaccttaaa 296  Q
    ||||||||||||||||| ||||||||||||||| ||||| |   ||||||| ||   |||| |||||| || ||| ||||| |||||||||||||| |||    
T  27786467 atttataagcaaaaaactactttttaggttcacggaataccc--tatgtatttggtgtataatatagaccaaatatattaggtattcaatgaacctaaaa 27786564  T
Q  297 agttattttttacttataaatgtgaccggaaggagtatgt 336  Q
    |||| | |||| ||||||||||||| |||| |||||||||    
T  27786565 agttgtgttttgcttataaatgtgatcggagggagtatgt 27786604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 326
Target Start/End: Complemental strand, 11534884 - 11534757
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaa 297  Q
    |||||||| ||||| |||| ||||||| |||| ||||||  ||||  ||||||||| |||||||||| || ||||||||| ||||||||||| |||||||    
T  11534884 atttataaacaaaatacaattttttagattcattgaatatttaat--gtatctgacctatatatagaccatatacattaggtattcaatgaatcttaaaa 11534787  T
Q  298 gt-tattttttacttataaatgtgaccgga 326  Q
    ||   |||||| ||||||||||| ||||||    
T  11534786 gtcgtttttttgcttataaatgtaaccgga 11534757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 25108987 - 25109039
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtga 321  Q
    |||||||||||||||||||||| | |||| |||||||||||||||||||||||    
T  25108987 atacattagttattcaatgaacataaaaaattattttttacttataaatgtga 25109039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 198 - 334
Target Start/End: Original strand, 30121962 - 30122101
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctg-acttata--tatagatcagatacattagttattcaatgaacctta 294  Q
    ||||||||| ||||| ||| |||||||||||| ||||||||||||||   ||   | |||||  ||||| |||||||||||| |||||||||  |||| |    
T  30121962 atttataagtaaaaatcaattttttaggttcattgaataactaatataagtcaccagttataattataggtcagatacattaattattcaatatacctaa 30122061  T
Q  295 aaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    ||| ||||||||| ||||||||||||| || | |||||||    
T  30122062 aaaattattttttgcttataaatgtgatcgaatggagtat 30122101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 333
Target Start/End: Complemental strand, 37914656 - 37914525
Alignment:
Q  199 tttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaag 298  Q
    ||||||||||||||| |  |||||||||||| ||||||| ||||  |||||| |   || ||||| ||||||||||||||||| |||||||  | |||||    
T  37914656 tttataagcaaaaaatatatttttaggttcattgaataattaat--gtatct-atacatttatagttcagatacattagttatccaatgaatttaaaaag 37914560  T
Q  299 ttattttttacttataaatgtgaccggaaggagta 333  Q
    || ||||||  ||| ||||||||||||| ||||||    
T  37914559 ttgttttttgtttagaaatgtgaccggagggagta 37914525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 333
Target Start/End: Complemental strand, 16867752 - 16867613
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaacc 291  Q
    |||| ||||||||||||||||||||||||||||| ||   ||||| | ||  |||||| ||  ||| ||| || |  || |||||||||||||||| |||    
T  16867752 atcacatttataagcaaaaaacaactttttaggtacatccaataattgat--gtatctaacccataaatatgaccgaatgcattagttattcaatgtacc 16867655  T
Q  292 ttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    | ||||||| |||||| ||||||||||||||| || ||||||    
T  16867654 taaaaagttgttttttgcttataaatgtgaccagagggagta 16867613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 287
Target Start/End: Original strand, 21150149 - 21150240
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatg 287  Q
    ||||||||||| |||||||| |||||||||| |||| | ||||||||  |||||||| | ||||||||||| | | ||||||| ||||||||||    
T  21150149 tcatatttatatgcaaaaaataactttttagattcattaaataacta--atgtatctaatttatatatagacccggtacattaattattcaatg 21150240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 337
Target Start/End: Complemental strand, 27786590 - 27786447
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttata-tatagatcagatacattagttattcaatgaacc 291  Q
    |||| |||||||||||||| ||||||||||||||||| |||||| ||||||  ||| ||   |||| |||| | || ||||||  | |||||  ||||||    
T  27786590 atcacatttataagcaaaacacaactttttaggttcattgaatacctaata--tatttggtctatattatacaccaaatacatagggtattccgtgaacc 27786493  T
Q  292 ttaaaagttattttttacttataaatgtgaccggaaggagtatgtt 337  Q
    | ||||||  |||||| |||||||||||||||| | ||||||||||    
T  27786492 taaaaagtagttttttgcttataaatgtgaccgaagggagtatgtt 27786447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 33913446 - 33913400
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttcctcca 91  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  33913446 ctactttattacttgttacaatttggtgcacttgccaatttcgtcca 33913400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 9502941 - 9502864
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtatgt 336  Q
    |||||| || ||||||||| | || |||||| || |||||| |||||||||||||||||||||||||| ||| |||||    
T  9502941 tatagaccaaatacattaggtgttgaatgaatctaaaaagtgattttttacttataaatgtgaccggatggaatatgt 9502864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 333
Target Start/End: Complemental strand, 28732518 - 28732453
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagtt-attttttacttataaatgtgaccggaaggagta 333  Q
    |||||||||||||||||||||||| ||| ||| | ||||||||||||||||||||| || ||||||    
T  28732518 atacattagttattcaatgaacctaaaatgttaagtttttacttataaatgtgaccagagggagta 28732453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 31836482 - 31836555
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagt 332  Q
    |||||| || |||||||| ||||||||||||||| ||||||| |  ||||||||||||||||||| || |||||    
T  31836482 tatagaccaaatacattaattattcaatgaacctaaaaagttgtcatttacttataaatgtgaccagagggagt 31836555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 55121233 - 55121176
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    |||||||||||||||||||||||| |||| || ||||||  |||||||||||||||||    
T  55121233 atacattagttattcaatgaacctaaaaaattgttttttgtttataaatgtgaccgga 55121176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 16867629 - 16867673
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    ||||||||||||||||||||||||||||| || ||||||||||||    
T  16867629 atttataagcaaaaaacaactttttaggtacattgaataactaat 16867673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 333
Target Start/End: Complemental strand, 49733681 - 49733617
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    ||||||||  |||||||| || || ||||||||| |||| |||||||||||||||||||||||||    
T  49733681 atacattaagtattcaataaatctaaaaagttatgttttgcttataaatgtgaccggaaggagta 49733617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 324
Target Start/End: Complemental strand, 52417762 - 52417691
Alignment:
Q  252 acttatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccg 324  Q
    ||||||||||| |  | ||||||||||||||| |||||| |||||| ||||||||||||||||||| ||||||    
T  52417762 acttatatataaactaaatacattagttattcgatgaac-ttaaaaattattttttacttataaatttgaccg 52417691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 21150215 - 21150148
Alignment:
Q  255 tatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgac 322  Q
    |||||||| || |||||||||||||||| |||||| || |||||||||||||| | ||||||| ||||    
T  21150215 tatatataaattagatacattagttatttaatgaatctaaaaagttattttttgcatataaatatgac 21150148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 26601974 - 26602013
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataa 237  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  26601974 atttataagcaaaaaacaactttttaggttcattgaataa 26602013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 324
Target Start/End: Complemental strand, 30122006 - 30121955
Alignment:
Q  273 attagttattcaatgaaccttaaaagttattttttacttataaatgtgaccg 324  Q
    |||||||||||||||||||| |||| ||  ||||||||||||||||||||||    
T  30122006 attagttattcaatgaacctaaaaaattgatttttacttataaatgtgaccg 30121955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 316
Target Start/End: Original strand, 37914541 - 37914656
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaa 297  Q
    |||| ||| |||||||||||||||||  |||| || |||||||||  ||||||||  |||| ||  || |||||||||| ||||||||||||||| ||||    
T  37914541 atttctaaacaaaaaacaactttttaaattcattggataactaat--gtatctgaactataaatgtat-agatacattaattattcaatgaacctaaaaa 37914637  T
Q  298 gttattttttacttataaa 316  Q
      |||||||| ||||||||    
T  37914638 tatattttttgcttataaa 37914656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 326
Target Start/End: Complemental strand, 18093907 - 18093780
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatat-agatcagatacattagttattcaatgaaccttaaa 296  Q
    |||||||||||| |||||| |||||||||| | ||||||| ||  ||||||||||| |||| ||  ||  |||||||||| |||||||||| |  | |||    
T  18093907 atttataagcaataaacaagtttttaggtttattgaataatta--atgtatctgacctataaatgtgacaagatacattaattattcaatgtatttaaaa 18093810  T
Q  297 agttattttttacttataaatgtgaccgga 326  Q
    | || ||||||  |||||||||||||||||    
T  18093809 atttgttttttgtttataaatgtgaccgga 18093780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 334
Target Start/End: Complemental strand, 1779553 - 1779488
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||||| | |||||||||| |||| ||||||||| ||||  ||||||||||||||||| |||||||    
T  1779553 atacatcaattattcaatgtacctaaaaagttatgttttgtttataaatgtgaccggagggagtat 1779488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 18093849 - 18093914
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccg 324  Q
    ||||| |||||||||||| ||||||||| ||||| |||| || ||| || ||||||||||||||||    
T  18093849 tataggtcagatacattaattattcaataaacctaaaaacttgtttattgcttataaatgtgaccg 18093914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 324
Target Start/End: Complemental strand, 29595887 - 29595823
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccg 324  Q
    ||||||||| ||||| |||||||||| ||||||| |||| |||| ||||| |||||||||||||||    
T  29595887 tatagatcaaatacactagttattca-tgaacctaaaaaattatgttttatttataaatgtgaccg 29595823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 26602024 - 26601972
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataaatgt 319  Q
    |||||| ||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  26602024 agatacgttaattattcaatgaacctaaaaagttgttttttgcttataaatgt 26601972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 328
Target Start/End: Original strand, 47250905 - 47250976
Alignment:
Q  256 atatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaag 328  Q
    ||||||| |||||||||||| |||||| ||| || || |||| ||| ||||||||||||||||||| ||||||    
T  47250905 atatatatatcagatacattggttattaaat-aagctaaaaaattaatttttacttataaatgtgatcggaag 47250976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 20179104 - 20179057
Alignment:
Q  117 agatgtatatgattcaatttaagatgtgaatcagttgaattgtctctt 164  Q
    |||||||||||||||||||| |||| || |||||||||||||| ||||    
T  20179104 agatgtatatgattcaattttagatatgtatcagttgaattgtttctt 20179057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 334
Target Start/End: Original strand, 29212914 - 29212989
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    ||||| |||||||||||| |||||||||| |||| ||||    |||||| |||||||||||||||| || ||||||    
T  29212914 tataggtcagatacattaattattcaatgtacctaaaaaacagttttttgcttataaatgtgaccgaaatgagtat 29212989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 334
Target Start/End: Original strand, 11534766 - 11534901
Alignment:
Q  198 atttataagcaaaaaa-caactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaa 296  Q
    |||||||||||||||| | |||||| || |||| |||||| |||||  |||| ||   ||||||||| ||||||||||||  ||||||||||| || |||    
T  11534766 atttataagcaaaaaaacgacttttaagattcattgaatacctaat--gtatatggtctatatataggtcagatacattaaatattcaatgaatctaaaa 11534863  T
Q  297 agttattttttacttataaatgtgaccggaaggagtat 334  Q
    | || | ||||  ||||||||| |||| |||| |||||    
T  11534864 aattgtattttgtttataaatgcgaccagaagaagtat 11534901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 337
Target Start/End: Original strand, 28732530 - 28732608
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtatgtt 337  Q
    |||||| | ||| ||||||| |||||||||| || ||||||| | |||| ||||||||||||| || | ||||||||||    
T  28732530 tatagaccggattcattagtcattcaatgaatctaaaaagttctattttgcttataaatgtgatcgaagggagtatgtt 28732608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 29290852 - 29290794
Alignment:
Q  258 atatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaa 316  Q
    ||||||||||||||||| |||| ||||||||| || |||||| | ||||| ||||||||    
T  29290852 atatagatcagatacatcagttgttcaatgaatctaaaaagtgaattttttcttataaa 29290794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 14419353 - 14419390
Alignment:
Q  49 tttattacttgttacaatttggtgctcttgccaatttc 86  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  14419353 tttattacttgttacgatttggtgcacttgccaatttc 14419390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 36081788 - 36081851
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaa---gttattttttacttataaatgt 319  Q
    ||||||| |||||||| | ||||||||||||||| ||||   ||| ||||||||||||||||||    
T  36081788 tatagataagatacatgaattattcaatgaacctaaaaaattgtttttttttacttataaatgt 36081851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 39682679 - 39682622
Alignment:
Q  258 atatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataa 315  Q
    ||||||| || |||||| | ||||||||||||||| |||| | |||||||||||||||    
T  39682679 atatagaccacatacatcatttattcaatgaacctaaaaaataattttttacttataa 39682622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 326
Target Start/End: Original strand, 50626762 - 50626827
Alignment:
Q  261 tagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    |||| |||||||||||||||||||||||||||  |||||  ||| || |||||||  |||||||||    
T  50626762 tagaccagatacattagttattcaatgaacctataaagtggtttgttgcttataatagtgaccgga 50626827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 612628 - 612569
Alignment:
Q  261 tagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtga 321  Q
    |||| ||||||||||||||||||||| || || |||  ||||||||| |||||||||||||    
T  612628 tagaccagatacattagttattcaataaatctaaaatattatttttt-cttataaatgtga 612569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 19790781 - 19790725
Alignment:
Q  270 tacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    ||||||| |||||||||| |||| ||||  || ||||| ||||||||||||||||||    
T  19790781 tacattaattattcaatgtacctaaaaaactactttttgcttataaatgtgaccgga 19790725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 317
Target Start/End: Complemental strand, 25494673 - 25494625
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaat 317  Q
    |||||||  ||||||||||||||| |||| |||||||||||||| ||||    
T  25494673 atacattgattattcaatgaacctaaaaaattattttttacttacaaat 25494625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 25918135 - 25918095
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaattt 85  Q
    |||| |||||||||||||||||||||||| |||| ||||||    
T  25918135 ctacgttattacttgttacaatttggtgcacttgtcaattt 25918095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 42896215 - 42896175
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagt 299  Q
    |||||| ||||||||| ||||||||||||||||| ||||||    
T  42896215 tatagaccagatacatcagttattcaatgaacctaaaaagt 42896175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 43471826 - 43471858
Alignment:
Q  117 agatgtatatgattcaatttaagatgtgaatca 149  Q
    ||||||||||||||||||||||||| |||||||    
T  43471826 agatgtatatgattcaatttaagatatgaatca 43471858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 198 - 324
Target Start/End: Complemental strand, 14578631 - 14578507
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaa 297  Q
    |||||||||||||| |||||||||||| |||| |||| || ||||||  ||| |   |||||||||||||||||||||| ||||||||||||||| |||     
T  14578631 atttataagcaaaatacaactttttagattcattgaacaaataatat--atcgggtctatatatagatcagatacattaattattcaatgaacctaaaat 14578534  T
Q  298 gttattttttacttataaatgtgaccg 324  Q
     ||| ||||| ||||||||||| ||||    
T  14578533 attaatttttgcttataaatgtaaccg 14578507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 322
Target Start/End: Original strand, 14578514 - 14578636
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaa 297  Q
    |||||||||||||||  ||  ||||||||||| ||||||| ||||  ||||||||  |||||||||| | |||| |||| || ||||||||| || ||||    
T  14578514 atttataagcaaaaattaatattttaggttcattgaataattaat--gtatctgatctatatatagacccgatatattatttgttcaatgaatctaaaaa 14578611  T
Q  298 gttattttttacttataaatgtgac 322  Q
    ||| | |||| ||||||||||||||    
T  14578612 gttgtattttgcttataaatgtgac 14578636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 33072674 - 33072623
Alignment:
Q  271 acattagttattcaatgaaccttaaaagttattttttacttataaatgtgac 322  Q
    |||||||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  33072674 acattagttattcaatgaacctaaaaagttattttttgcttgtaaatgtgac 33072623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 18147871 - 18147818
Alignment:
Q  268 gatacattagttattcaatgaaccttaaaagttattttttacttataaatgtga 321  Q
    ||||||||||||||||||||||||| ||||||| |||||| | |||||||||||    
T  18147871 gatacattagttattcaatgaacctaaaaagtttttttttgcatataaatgtga 18147818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 4578269 - 4578337
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagtta-ttttttacttataaatgtgaccggaaggagtatgt 336  Q
    ||||||||| |||||||||||||| |||||| | |||||| |||||||||||||| ||| |||||||||    
T  4578269 atacattaggtattcaatgaacctaaaaagtgatttttttgcttataaatgtgacgggagggagtatgt 4578337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 27988140 - 27988084
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgacc 323  Q
    |||||||||| ||||||||||||| | ||||||| |||||| |||||||||||||||    
T  27988140 agatacattacttattcaatgaacttaaaaagttgttttttgcttataaatgtgacc 27988084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 28045442 - 28045386
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgacc 323  Q
    |||||||||| ||||||||||||| | ||||||| |||||| |||||||||||||||    
T  28045442 agatacattacttattcaatgaacttaaaaagttgttttttgcttataaatgtgacc 28045386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 32240461 - 32240501
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaattt 85  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  32240461 ctactttattacttgttacaatttggtgcacttgccaattt 32240501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 6590863 - 6590918
Alignment:
Q  268 gatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgacc 323  Q
    ||||||||| |||||||||| |||| |||||| ||||||| |||||||||||||||    
T  6590863 gatacattaattattcaatgtacctaaaaagtaattttttgcttataaatgtgacc 6590918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 267 - 332
Target Start/End: Original strand, 6616589 - 6616654
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagt 332  Q
    |||||||||| |||||| ||| |||| |||| | ||||||| |||||||||||||||||| |||||    
T  6616589 agatacattaattattccatgtacctaaaaaatcattttttgcttataaatgtgaccggagggagt 6616654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 14113294 - 14113367
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtatgttttttg 342  Q
    |||||||| |||||||||| | || |||||| |||||||||||| |||| |||||| | |||||| ||||||||    
T  14113294 atacattaattattcaatgtatctaaaaagtcattttttacttagaaatatgaccgaagggagtacgttttttg 14113367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 18147817 - 18147866
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    |||| ||||||| |||||||| ||||||||||||||| ||||||||||||    
T  18147817 atcacatttatatgcaaaaaaaaactttttaggttcattgaataactaat 18147866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 20694510 - 20694567
Alignment:
Q  279 tattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtatgt 336  Q
    ||||||||| | || |||| |||||||||| ||||||||||||||||| |||||||||    
T  20694510 tattcaatgtatctaaaaaattattttttagttataaatgtgaccggagggagtatgt 20694567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 326
Target Start/End: Complemental strand, 289187 - 289120
Alignment:
Q  258 atatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    ||||||| || ||||||||  ||||||||||| || ||| |||||||||| ||||||||||||||||||    
T  289187 atatagaccaaatacattaaatattcaatgaatct-aaatgttatttttttcttataaatgtgaccgga 289120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 14113274 - 14113206
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtatg 335  Q
    |||||||||| |||||  ||| |||| |||||||||||||| |||| |||||||||||||  |||||||    
T  14113274 agatacattaattattggatgtacctaaaaagttattttttgcttagaaatgtgaccggagagagtatg 14113206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 27988090 - 27988134
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    |||||||||||||||||||||||||| ||||| ||||||| ||||    
T  27988090 atttataagcaaaaaacaactttttaagttcattgaataagtaat 27988134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 28045392 - 28045436
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    |||||||||||||||||||||||||| ||||| ||||||| ||||    
T  28045392 atttataagcaaaaaacaactttttaagttcattgaataagtaat 28045436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 324
Target Start/End: Original strand, 31245177 - 31245257
Alignment:
Q  244 tgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccg 324  Q
    ||||| ||||||||||||||| |||||||| || |||||  || || ||  |||||||||||||| |||||||| ||||||    
T  31245177 tgtatttgacttatatatagaccagatacaataattatttgataaatctacaaagttattttttatttataaatatgaccg 31245257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 33072628 - 33072672
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||||    
T  33072628 atttacaagcaaaaaataactttttaggttcattgaataactaat 33072672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 34286273 - 34286329
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataa 315  Q
    |||||| ||||||||| ||||||| ||||||||||||||||  |||||| |||||||    
T  34286273 tatagaccagatacataagttattgaatgaaccttaaaagtggttttttgcttataa 34286329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 40737899 - 40737967
Alignment:
Q  265 tcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagta 333  Q
    |||||||||||| |||||||||| |||| ||||  |||||||| ||||||||| |||| ||| ||||||    
T  40737899 tcagatacattaattattcaatgtacctaaaaaactattttttgcttataaatatgactggagggagta 40737967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 1157067 - 1156996
Alignment:
Q  265 tcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtatgt 336  Q
    |||||||||||| |||||||||| | || ||||| |   |||||||||||||||||| |||| |||||||||    
T  1157067 tcagatacattaattattcaatgtatctaaaaagctgcattttacttataaatgtgatcggatggagtatgt 1156996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 4079596 - 4079553
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataa 237  Q
    |||||||||||| |||||||||| |||||||||||| |||||||    
T  4079596 tcatatttataaacaaaaaacaattttttaggttcattgaataa 4079553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 321
Target Start/End: Original strand, 9503612 - 9503675
Alignment:
Q  258 atatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtga 321  Q
    ||||||| || ||||||||  ||||||||||| || ||||||||||||||  ||||||||||||    
T  9503612 atatagaccaaatacattaaatattcaatgaatctaaaaagttattttttgtttataaatgtga 9503675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 12957563 - 12957618
Alignment:
Q  37 taagcttcctactttattacttgttacaatttggtgctcttgccaatttcctccat 92  Q
    ||||||| ||||||||||||||||||| |||| |||| |||| ||||||| |||||    
T  12957563 taagcttactactttattacttgttacgatttagtgcacttgtcaatttcgtccat 12957618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 13305673 - 13305720
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttcctccat 92  Q
    |||||||||||||||||||||||| | || |||||||||||| |||||    
T  13305673 ctactttattacttgttacaattttgcgcacttgccaatttcgtccat 13305720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 30114809 - 30114870
Alignment:
Q  255 tatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaat 317  Q
    |||||||||| || |||||||||||||||||||||  ||||||  |||||||| |||||||||    
T  30114809 tatatatagaccaaatacattagttattcaatgaa-tttaaaaaatattttttgcttataaat 30114870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 1644395 - 1644440
Alignment:
Q  47 actttattacttgttacaatttggtgctcttgccaatttcctccat 92  Q
    ||||| ||||||||||||||||||||  |||||||||||| |||||    
T  1644395 acttttttacttgttacaatttggtgtacttgccaatttcgtccat 1644440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 2602112 - 2602055
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    |||||||| ||||| ||| ||| | |||| ||||||||||||||||||||||| ||||    
T  2602112 atacattaattatttaataaacttaaaaaattattttttacttataaatgtgatcgga 2602055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 334
Target Start/End: Original strand, 7693118 - 7693183
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||||||| ||| |||||||| || |||||| | ||||| |||||||||  |||||||||||||||    
T  7693118 atacattaattactcaatgaatctaaaaagtcaattttttcttataaataggaccggaaggagtat 7693183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 9503519 - 9503584
Alignment:
Q  256 atatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtga 321  Q
    |||||||||| | ||||||||  ||||||||||| |  ||||||| |||||| |||||||||||||    
T  9503519 atatatagattaaatacattaaatattcaatgaatcgaaaaagttgttttttgcttataaatgtga 9503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 326
Target Start/End: Complemental strand, 14110118 - 14110085
Alignment:
Q  293 taaaagttattttttacttataaatgtgaccgga 326  Q
    ||||||||||||||| ||||||||||||||||||    
T  14110118 taaaagttattttttgcttataaatgtgaccgga 14110085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 28900180 - 28900139
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttc 86  Q
    ||||||||||||||||||||||||||||  |||| |||||||    
T  28900180 ctactttattacttgttacaatttggtgtacttgtcaatttc 28900139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 30557009 - 30557062
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgtgac 322  Q
    ||||||| |||||||||||||||| ||||||| |||||   |||||||||||||    
T  30557009 atacattggttattcaatgaacctaaaaagttgtttttcgtttataaatgtgac 30557062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 28075681 - 28075721
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaattt 85  Q
    ||||||||||||||||||||||||||||  |||| ||||||    
T  28075681 ctactttattacttgttacaatttggtgtacttgtcaattt 28075721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 30557057 - 30557017
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataac 238  Q
    |||||||| | ||||||||||||||||||||| ||||||||    
T  30557057 atttataaacgaaaaacaactttttaggttcattgaataac 30557017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 198 - 323
Target Start/End: Original strand, 3846442 - 3846566
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaa 297  Q
    |||||||||||||||| || |||||| ||||| ||||||| ||||  |||| |||| |||||||||| | |||||||||| |||| ||||||| | ||||    
T  3846442 atttataagcaaaaaataattttttaagttcattgaataaataat--gtatatgacctatatatagaccggatacattagatattaaatgaacttaaaaa 3846539  T
Q  298 gtta-ttttttacttataaatgtgacc 323  Q
    |||| |||||| |||||||||| ||||    
T  3846540 gttatttttttgcttataaatgcgacc 3846566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 333
Target Start/End: Complemental strand, 3846560 - 3846426
Alignment:
Q  198 atttataagcaaaaaac-aactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaa 296  Q
    ||||||||||||||||  ||||||||| ||||| | |||| |||||  ||||| |   ||||||||| ||| |||||||| ||||||||||||| | |||    
T  3846560 atttataagcaaaaaaataactttttaagttcatttaatatctaat--gtatccggtctatatataggtcatatacattatttattcaatgaacttaaaa 3846463  T
Q  297 agttattttttacttataaatgtgaccggaaggagta 333  Q
    | ||||||||| |||||||||||||||| | ||||||    
T  3846462 aattattttttgcttataaatgtgaccgaagggagta 3846426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 326
Target Start/End: Original strand, 29977976 - 29978057
Alignment:
Q  243 atgtatctgacttatatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    ||||||||||  ||||||||||||||||| |||| ||||||||||||  | || ||||||||||||||||||||||||| ||||    
T  29977976 atgtatctga--tatatatagatcagatatattaattattcaatgaagataaatagttattttttacttataaatgtgatcgga 29978057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 2271259 - 2271147
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacct 292  Q
    |||| |||||||||||||||| |||||||||| |||| |||| |||||  |||||| |||| ||||||| || |  ||| |||| ||||||||| ||| |    
T  2271259 atcacatttataagcaaaaaataactttttagattcattgaacaacta--atgtatttgacatatatattgacccaatagattacttattcaataaactt 2271162  T
Q  293 taaaagttatttttt 307  Q
    |||||||||||||||    
T  2271161 taaaagttatttttt 2271147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 2271193 - 2271263
Alignment:
Q  256 atatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccgga 326  Q
    |||||||  ||| ||||||||||| ||||||||| || |||||||||||||| ||||||||||||| ||||    
T  2271193 atatatatgtcaaatacattagttgttcaatgaatctaaaaagttattttttgcttataaatgtgatcgga 2271263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 208 - 326
Target Start/End: Original strand, 674071 - 674188
Alignment:
Q  208 aaaaaacaactttttaggttcactgaataactaatatgtatctga-cttatatatagatcagatacattagttattcaatgaaccttaaaagttattttt 306  Q
    |||||||||||||||||||| |  |||||| ||||  |||| ||  | ||| |||||| || ||| ||||||||||||||||| || |||| || |||||    
T  674071 aaaaaacaactttttaggttgatagaataattaat--gtatttgctcatatttatagaccaaatatattagttattcaatgaatctaaaaaattgttttt 674168  T
Q  307 tacttataaatgtgaccgga 326  Q
    | ||||||||||||||||||    
T  674169 tgcttataaatgtgaccgga 674188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 24252960 - 24253016
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgacc 323  Q
    |||||||||| |||||||||| |||| |||||||||||||| ||||||||| |||||    
T  24252960 agatacattaattattcaatgtacctaaaaagttattttttgcttataaatatgacc 24253016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 13194292 - 13194339
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttcctccat 92  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  13194292 ctactttattacttgttacgatttggtgcacttgccaatttcgtccat 13194339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 674179 - 674133
Alignment:
Q  198 atttataagcaaaaaacaactttttaggttcactgaataactaatat 244  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||||||    
T  674179 atttataagcaaaaaacaattttttagattcattgaataactaatat 674133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 334
Target Start/End: Original strand, 7055626 - 7055704
Alignment:
Q  256 atatatagatcagatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||||||||||| ||| ||||  |||||||||||||| ||||||   ||||| ||||||||||||| |||| |||||||    
T  7055626 atatatagatcaaatatattatgtattcaatgaacctaaaaagtacatttttgcttataaatgtgatcggagggagtat 7055704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 333
Target Start/End: Complemental strand, 7055692 - 7055554
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatatagatcagatacattagttattcaatgaacct 292  Q
    |||| |||||||||||||||   |||||||||||||| ||||||  |||||  ||| |||  ||||||| || || ||||||||  |||| |||||| ||    
T  7055692 atcacatttataagcaaaaatgtactttttaggttcattgaatacataata--tatttgatctatatattgaccaaatacattaagtattgaatgaatct 7055595  T
Q  293 taaaagttattttttacttataaatgtgaccggaaggagta 333  Q
     |||| |  |||||||||||| |||||||| ||| ||||||    
T  7055594 aaaaaatatttttttacttatcaatgtgactggagggagta 7055554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 9692822 - 9692870
Alignment:
Q  196 atatttataagcaaaaaacaactttttaggttcactgaataactaatat 244  Q
    ||||||||||| ||||||||| | ||| |||||||||||||||||||||    
T  9692822 atatttataagaaaaaaacaattgtttgggttcactgaataactaatat 9692870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 9942475 - 9942435
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaattt 85  Q
    |||||||||||||||||| |||||||||| |||||||||||    
T  9942475 ctactttattacttgttataatttggtgcacttgccaattt 9942435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 22727253 - 22727293
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaattt 85  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  22727253 ctactttattacttgttacaatttggtgcacttgtcaattt 22727293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 24253014 - 24252966
Alignment:
Q  194 tcatatttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    |||||||||||||||||||| |||||||||||| || ||||||| ||||    
T  24253014 tcatatttataagcaaaaaataactttttaggtacattgaataattaat 24252966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 29400673 - 29400721
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaa 241  Q
    ||||||||||||| ||||||||||||||||| || || |||||||||||    
T  29400673 atcatatttataaacaaaaaacaactttttaagtacattgaataactaa 29400721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 15576204 - 15576251
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttcctccat 92  Q
    ||||||||||||||||||| ||||| ||| |||||||||||| |||||    
T  15576204 ctactttattacttgttacgatttgatgcacttgccaatttcgtccat 15576251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 16529378 - 16529425
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttcctccat 92  Q
    |||||||||||||||||| |||||||||| | |||||||||| |||||    
T  16529378 ctactttattacttgttataatttggtgcacctgccaatttcgtccat 16529425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 862874 - 862816
Alignment:
Q  276 agttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagtat 334  Q
    |||||||||||| |||| |||||| | ||||| ||||||||| |||||||| |||||||    
T  862874 agttattcaatgtacctaaaaagtcaatttttgcttataaatatgaccggagggagtat 862816  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 151
Target Start/End: Complemental strand, 6724546 - 6724512
Alignment:
Q  117 agatgtatatgattcaatttaagatgtgaatcagt 151  Q
    ||||||||||||||||||||||||| |||||||||    
T  6724546 agatgtatatgattcaatttaagatatgaatcagt 6724512  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 319
Target Start/End: Complemental strand, 31159136 - 31159086
Alignment:
Q  269 atacattagttattcaatgaaccttaaaagttattttttacttataaatgt 319  Q
    |||||||| ||||||||||||| | ||||  ||||||||||||||||||||    
T  31159136 atacattaattattcaatgaacataaaaatgtattttttacttataaatgt 31159086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 5069946 - 5069995
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    |||| ||||||||||||||||||||||||||| | || ||||||| ||||    
T  5069946 atcacatttataagcaaaaaacaactttttagatacattgaataattaat 5069995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 5070000 - 5069947
Alignment:
Q  268 gatacattagttattcaatgaaccttaaaagttattttttacttataaatgtga 321  Q
    ||||||||| |||||||||| | || ||||||| |||||| |||||||||||||    
T  5070000 gatacattaattattcaatgtatctaaaaagttgttttttgcttataaatgtga 5069947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 24089767 - 24089695
Alignment:
Q  259 tatagatcagatacattagttattcaatgaaccttaaaagt--tattttttacttataaatgtgaccggaagg 329  Q
    ||||||| |||||||| | ||||||||||||||| ||||||  | |||||| |||||||  ||||||||||||    
T  24089767 tatagattagatacatcaattattcaatgaacctaaaaagtggttttttttgcttataatagtgaccggaagg 24089695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 691013 - 690973
Alignment:
Q  208 aaaaaacaactttttaggttcactgaataactaatatgtat 248  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  691013 aaaaaacaactttttaaattcattgaataactaatatgtat 690973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 8485988 - 8486040
Alignment:
Q  112 agtgaagatgtatatgattcaatttaagatgtgaatcagttgaattgtctctt 164  Q
    |||| |||||||||||||||||||| |||| || |||||| ||||||| ||||    
T  8485988 agtgtagatgtatatgattcaattttagatatgcatcagtagaattgtttctt 8486040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 17320795 - 17320835
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaattt 85  Q
    |||||||||||||| |||| ||||||||| |||||||||||    
T  17320795 ctactttattacttattacgatttggtgcacttgccaattt 17320835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 320805 - 320692
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaatatgtatctgacttatatata-gatcagatacattagttattcaatgaacc 291  Q
    |||| |||||||||||||| |||||||||||| |||| | |||||||||||  ||||||  ||||| ||| ||| |||||||||||||||||||  ||||    
T  320805 atcacatttataagcaaaacacaactttttagattcattaaataactaata--tatctggtttataaataggattagatacattagttattcaacaaacc 320708  T
Q  292 ttaaaagttatttttt 307  Q
    | |||| || ||||||    
T  320707 taaaaaattgtttttt 320692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 335
Target Start/End: Original strand, 320692 - 320818
Alignment:
Q  208 aaaaaacaactttttaggttcactgaataactaatatgtatctga-cttatatatagatcagatacattagttattcaatgaaccttaaaagttattttt 306  Q
    ||||||||| ||||||||||   ||||||||||||  |||||| | | ||| |||| | |||||| |||||||||| |||||| || ||||||| | |||    
T  320692 aaaaaacaattttttaggtttgttgaataactaat--gtatctaatcctatttataaaccagatatattagttatttaatgaatctaaaaagttgtgttt 320789  T
Q  307 tacttataaatgtgaccggaaggagtatg 335  Q
    | |||||||||||||  ||| ||||||||    
T  320790 tgcttataaatgtgattggagggagtatg 320818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 5880 - 5827
Alignment:
Q  268 gatacattagttattcaatgaaccttaaaagttattttttacttataaatgtga 321  Q
    |||||||||||||||||||| |||| |||||| ||||||| |||||||||||||    
T  5880 gatacattagttattcaatgtacctaaaaagtcattttttgcttataaatgtga 5827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 5826 - 5875
Alignment:
Q  193 atcatatttataagcaaaaaacaactttttaggttcactgaataactaat 242  Q
    |||| ||||||||||||||||  ||||||||||| || ||||||||||||    
T  5826 atcacatttataagcaaaaaatgactttttaggtacattgaataactaat 5875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 267 - 332
Target Start/End: Original strand, 5875 - 5940
Alignment:
Q  267 agatacattagttattcaatgaaccttaaaagttattttttacttataaatgtgaccggaaggagt 332  Q
    |||||||||| |||||| ||| |||| |||| | ||||||| |||||||||||||||||| |||||    
T  5875 agatacattaattattccatgtacctaaaaaatcattttttgcttataaatgtgaccggagggagt 5940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 9974 - 10023
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttcctccatta 94  Q
    ||||||||||||||||||| |||||||||  ||||||||||| |||||||    
T  9974 ctactttattacttgttacgatttggtgcatttgccaatttcatccatta 10023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 7372 - 7419
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttcctccat 92  Q
    ||||||||||||||||||| ||||||||| |||| ||||||| |||||    
T  7372 ctactttattacttgttacgatttggtgcacttgtcaatttcgtccat 7419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 22583 - 22624
Alignment:
Q  45 ctactttattacttgttacaatttggtgctcttgccaatttc 86  Q
    |||||||||||||||||||||| || ||| ||||||||||||    
T  22583 ctactttattacttgttacaatatgatgcacttgccaatttc 22624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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