View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20622_high_3 (Length: 380)
Name: NF20622_high_3
Description: NF20622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20622_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 116 - 364
Target Start/End: Complemental strand, 25144813 - 25144563
Alignment:
| Q |
116 |
aaaaaagagaaggataatgcaattataaataagtttgacaaatcatatttgttagtccaagtatcaaagagcttagttttaaatttttctcaagtcaagt |
215 |
Q |
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| T |
25144813 |
aaaaaagagaaggataatgcaattataaataagtttgacaaatcaaatt-gttagtccaagtatcaaagagcttagttttaaatttttctcaagtcaagt |
25144715 |
T |
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| Q |
216 |
tgaagggtcatgcattcacgctttcatgaattttgattgttgaataaaaa---tcacacaacctacatatcaagttgtgttttaaaatagatttggtgac |
312 |
Q |
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| T |
25144714 |
tgaagggtcatgcattcacgctttcatgaattttgatttttgaataaaaaaaatcacacaacctacatatcaagttgtgttttaaaatagatttggtgac |
25144615 |
T |
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| Q |
313 |
gtcataatacaaatcatcaaatcctattcaacaatcatgatctttattcaaa |
364 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
25144614 |
gtcataatacaaatcatcaaatcctattcaacaatcttgatctttattcaaa |
25144563 |
T |
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