View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20622_high_9 (Length: 208)
Name: NF20622_high_9
Description: NF20622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20622_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 4662964 - 4663134
Alignment:
| Q |
20 |
cagaagaccagttcattaagtgggagaacctcatgaccgaaa-tacaacatcatgcagttcaatctacctgatgtgggactcataacaacctcacaaact |
118 |
Q |
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| T |
4662964 |
cagaagaccatttcattaagtgggagaacctcatgacctaaaataccacatcaagcactttaatctacttgatgtgagactcataacaatctcacaaact |
4663063 |
T |
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| Q |
119 |
catttatgatggatattgtctttacttataaatacttgtgcagaccgtctcagagtgtctttcatcctatatat |
192 |
Q |
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||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |
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| T |
4663064 |
catttatgatggatattatctttacttataaatacttgt---gactgtctcagagtgtctttcatcctatatat |
4663134 |
T |
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