View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20624_low_3 (Length: 524)

Name: NF20624_low_3
Description: NF20624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20624_low_3
NF20624_low_3
[»] chr5 (59 HSPs)
chr5 (242-515)||(26414742-26415013)
chr5 (16-223)||(26414203-26414407)
chr5 (393-515)||(13634708-13634831)
chr5 (393-515)||(7544133-7544256)
chr5 (396-515)||(16938479-16938599)
chr5 (392-515)||(28279600-28279725)
chr5 (404-515)||(2550476-2550588)
chr5 (394-515)||(10476024-10476148)
chr5 (394-501)||(20147014-20147116)
chr5 (394-515)||(36392274-36392395)
chr5 (390-515)||(40815291-40815416)
chr5 (396-515)||(4373690-4373810)
chr5 (404-515)||(36363040-36363152)
chr5 (404-515)||(11756886-11756997)
chr5 (394-509)||(14681468-14681583)
chr5 (434-515)||(9856919-9857000)
chr5 (388-467)||(1657985-1658065)
chr5 (404-512)||(10650435-10650546)
chr5 (392-467)||(14245084-14245160)
chr5 (398-508)||(22022849-22022963)
chr5 (397-483)||(13634867-13634954)
chr5 (457-515)||(8502959-8503017)
chr5 (426-515)||(9798736-9798826)
chr5 (441-515)||(10072771-10072845)
chr5 (396-467)||(14245218-14245290)
chr5 (393-515)||(10204573-10204696)
chr5 (394-472)||(11436937-11437016)
chr5 (393-515)||(15986748-15986871)
chr5 (440-515)||(37606940-37607014)
chr5 (398-515)||(42681450-42681573)
chr5 (398-515)||(34980812-34980930)
chr5 (396-515)||(14684606-14684728)
chr5 (440-515)||(37551453-37551527)
chr5 (440-515)||(37654283-37654357)
chr5 (398-483)||(7544292-7544378)
chr5 (440-497)||(11419303-11419360)
chr5 (398-515)||(16501914-16502034)
chr5 (393-501)||(33744331-33744440)
chr5 (440-515)||(37779150-37779223)
chr5 (404-466)||(36363205-36363268)
chr5 (394-483)||(16938635-16938725)
chr5 (434-515)||(5688452-5688533)
chr5 (396-464)||(10476203-10476272)
chr5 (396-433)||(11437149-11437186)
chr5 (399-467)||(11757075-11757144)
chr5 (395-515)||(20513573-20513682)
chr5 (396-467)||(33744193-33744265)
chr5 (396-466)||(10650587-10650658)
chr5 (393-436)||(40305869-40305912)
chr5 (434-488)||(2550391-2550445)
chr5 (394-467)||(8502833-8502907)
chr5 (396-433)||(5688597-5688634)
chr5 (442-515)||(13298313-13298386)
chr5 (474-515)||(17024348-17024389)
chr5 (396-512)||(21580947-21581064)
chr5 (388-421)||(35176756-35176789)
chr5 (396-459)||(37551585-37551649)
chr5 (396-459)||(37654415-37654479)
chr5 (396-436)||(40305670-40305710)
[»] chr2 (54 HSPs)
chr2 (396-515)||(36347665-36347785)
chr2 (391-515)||(15224818-15224943)
chr2 (396-515)||(35736175-35736295)
chr2 (390-515)||(41778767-41778893)
chr2 (404-515)||(8426995-8427107)
chr2 (396-515)||(39732853-39732972)
chr2 (394-515)||(19566945-19567062)
chr2 (398-515)||(36046328-36046443)
chr2 (387-515)||(9426976-9427105)
chr2 (434-515)||(23748134-23748215)
chr2 (398-515)||(2241413-2241530)
chr2 (404-515)||(31795893-31796000)
chr2 (399-515)||(36566975-36567093)
chr2 (398-515)||(41841684-41841802)
chr2 (434-515)||(39821708-39821789)
chr2 (393-511)||(12541767-12541882)
chr2 (396-515)||(40022363-40022490)
chr2 (405-515)||(886927-887036)
chr2 (442-501)||(9591973-9592032)
chr2 (394-515)||(2381111-2381233)
chr2 (394-467)||(9631732-9631806)
chr2 (452-515)||(16565832-16565897)
chr2 (394-467)||(23748267-23748341)
chr2 (440-514)||(28262568-28262642)
chr2 (396-467)||(22356176-22356248)
chr2 (392-467)||(35736359-35736435)
chr2 (432-515)||(29525857-29525940)
chr2 (386-515)||(3094477-3094607)
chr2 (398-483)||(8426881-8426967)
chr2 (394-467)||(17380013-17380087)
chr2 (394-515)||(31061357-31061479)
chr2 (446-515)||(37740015-37740085)
chr2 (396-501)||(42296441-42296547)
chr2 (393-489)||(31795766-31795863)
chr2 (383-515)||(45257294-45257427)
chr2 (389-436)||(17379839-17379886)
chr2 (396-466)||(45257480-45257551)
chr2 (441-515)||(6721746-6721820)
chr2 (394-515)||(34187573-34187695)
chr2 (446-515)||(7681299-7681368)
chr2 (433-514)||(39354299-39354380)
chr2 (405-489)||(40022523-40022608)
chr2 (400-435)||(33265611-33265646)
chr2 (397-467)||(36046205-36046276)
chr2 (394-483)||(36347539-36347629)
chr2 (434-483)||(1583233-1583282)
chr2 (434-483)||(15224733-15224782)
chr2 (404-456)||(31061543-31061596)
chr2 (415-466)||(887283-887335)
chr2 (394-466)||(7681417-7681488)
chr2 (404-515)||(9631566-9631680)
chr2 (479-515)||(12751899-12751935)
chr2 (404-463)||(31928225-31928285)
chr2 (434-482)||(39732768-39732816)
[»] chr7 (52 HSPs)
chr7 (394-515)||(39855989-39856111)
chr7 (389-515)||(1051622-1051749)
chr7 (399-515)||(33655232-33655349)
chr7 (394-505)||(13771080-13771192)
chr7 (396-515)||(47390855-47390975)
chr7 (425-515)||(41497081-41497172)
chr7 (396-515)||(34228442-34228563)
chr7 (396-515)||(25887192-25887312)
chr7 (392-515)||(40196656-40196769)
chr7 (397-515)||(31571592-31571713)
chr7 (434-515)||(43230275-43230356)
chr7 (392-515)||(37925837-37925961)
chr7 (398-515)||(24970289-24970407)
chr7 (404-515)||(34235131-34235239)
chr7 (434-515)||(17852910-17852991)
chr7 (392-515)||(37417757-37417871)
chr7 (399-515)||(26365770-26365888)
chr7 (404-510)||(41008190-41008298)
chr7 (394-482)||(4833529-4833618)
chr7 (393-515)||(33519045-33519168)
chr7 (437-515)||(42306376-42306454)
chr7 (392-463)||(18231762-18231834)
chr7 (396-467)||(40196532-40196604)
chr7 (396-483)||(41496957-41497045)
chr7 (396-467)||(48881558-48881630)
chr7 (436-491)||(23029482-23029537)
chr7 (396-466)||(36267553-36267624)
chr7 (399-513)||(18795721-18795835)
chr7 (394-463)||(30592251-30592321)
chr7 (408-514)||(48151996-48152099)
chr7 (398-515)||(40572358-40572475)
chr7 (399-483)||(42306486-42306571)
chr7 (396-467)||(13770948-13771020)
chr7 (396-463)||(33519224-33519292)
chr7 (396-515)||(36267677-36267797)
chr7 (476-515)||(22163233-22163272)
chr7 (476-515)||(22221941-22221980)
chr7 (393-467)||(28074100-28074175)
chr7 (404-461)||(40282205-40282263)
chr7 (398-483)||(45940658-45940744)
chr7 (394-467)||(47391028-47391102)
chr7 (434-491)||(10315652-10315709)
chr7 (399-448)||(31364237-31364285)
chr7 (435-483)||(33655148-33655196)
chr7 (460-515)||(45940780-45940835)
chr7 (394-468)||(48015378-48015453)
chr7 (406-467)||(35422136-35422198)
chr7 (398-515)||(37620776-37620894)
chr7 (394-466)||(4835477-4835550)
chr7 (388-464)||(25887368-25887444)
chr7 (394-431)||(48881758-48881795)
chr7 (479-515)||(18063685-18063721)
[»] chr4 (58 HSPs)
chr4 (394-513)||(54935065-54935186)
chr4 (393-515)||(31348445-31348568)
chr4 (394-515)||(54320433-54320554)
chr4 (394-515)||(1968483-1968605)
chr4 (404-515)||(27735753-27735865)
chr4 (394-515)||(37711136-37711263)
chr4 (399-515)||(46007825-46007942)
chr4 (396-515)||(47433832-47433953)
chr4 (396-515)||(26166937-26167057)
chr4 (396-515)||(45741890-45742010)
chr4 (412-515)||(49735592-49735695)
chr4 (447-515)||(35248738-35248806)
chr4 (394-515)||(5730954-5731077)
chr4 (409-515)||(6891373-6891480)
chr4 (397-515)||(36151577-36151696)
chr4 (393-515)||(56135746-56135869)
chr4 (393-467)||(49735465-49735540)
chr4 (398-515)||(2247927-2248043)
chr4 (394-515)||(29798286-29798404)
chr4 (396-515)||(45132625-45132739)
chr4 (393-515)||(17938231-17938355)
chr4 (396-467)||(54935241-54935313)
chr4 (405-515)||(16400809-16400920)
chr4 (393-467)||(54576324-54576399)
chr4 (394-515)||(21695013-21695134)
chr4 (441-515)||(28332850-28332924)
chr4 (441-515)||(44784038-44784112)
chr4 (412-515)||(24565470-24565572)
chr4 (451-515)||(2917087-2917151)
chr4 (396-515)||(22186719-22186839)
chr4 (396-467)||(37711295-37711367)
chr4 (392-483)||(45742046-45742138)
chr4 (396-467)||(54320606-54320678)
chr4 (404-472)||(6938289-6938358)
chr4 (396-515)||(22920981-22921102)
chr4 (396-515)||(22970697-22970818)
chr4 (423-483)||(31348348-31348409)
chr4 (396-515)||(17182609-17182729)
chr4 (412-467)||(21694906-21694962)
chr4 (447-515)||(41174397-41174465)
chr4 (452-515)||(34995108-34995171)
chr4 (398-515)||(47846179-47846298)
chr4 (398-467)||(27735917-27735987)
chr4 (394-467)||(41174517-41174591)
chr4 (394-466)||(6938420-6938493)
chr4 (403-467)||(17938114-17938179)
chr4 (396-444)||(49735687-49735736)
chr4 (396-467)||(5730830-5730902)
chr4 (396-467)||(37761636-37761708)
chr4 (394-450)||(53260716-53260771)
chr4 (394-464)||(7977672-7977743)
chr4 (394-468)||(11089687-11089755)
chr4 (404-450)||(35565566-35565613)
chr4 (393-466)||(24565343-24565417)
chr4 (451-489)||(36277781-36277819)
chr4 (404-515)||(55510177-55510290)
chr4 (404-467)||(35248858-35248922)
chr4 (425-464)||(44784166-44784206)
[»] scaffold0067 (2 HSPs)
scaffold0067 (394-509)||(39320-39436)
scaffold0067 (396-483)||(39186-39275)
[»] chr1 (50 HSPs)
chr1 (392-515)||(40095057-40095182)
chr1 (396-515)||(30010332-30010452)
chr1 (396-515)||(32951442-32951562)
chr1 (404-515)||(2859056-2859168)
chr1 (394-512)||(12234008-12234127)
chr1 (393-515)||(38510018-38510141)
chr1 (394-515)||(10391870-10391992)
chr1 (396-515)||(35349586-35349706)
chr1 (394-515)||(41498402-41498524)
chr1 (404-515)||(51597676-51597788)
chr1 (434-515)||(8529838-8529919)
chr1 (434-515)||(50744405-50744486)
chr1 (393-467)||(30010504-30010579)
chr1 (407-488)||(7444489-7444571)
chr1 (394-515)||(49946712-49946834)
chr1 (396-482)||(40094933-40095020)
chr1 (395-488)||(26324013-26324112)
chr1 (396-467)||(38509894-38509966)
chr1 (396-515)||(26940967-26941077)
chr1 (440-511)||(45585813-45585884)
chr1 (398-467)||(12234182-12234252)
chr1 (441-515)||(44211029-44211103)
chr1 (402-466)||(25268437-25268502)
chr1 (394-467)||(35349464-35349536)
chr1 (396-515)||(1085614-1085734)
chr1 (396-463)||(35927988-35928056)
chr1 (396-515)||(49832547-49832667)
chr1 (434-509)||(2470865-2470940)
chr1 (396-480)||(2858932-2859017)
chr1 (435-515)||(6563618-6563697)
chr1 (396-482)||(41498561-41498649)
chr1 (392-467)||(47261443-47261519)
chr1 (399-467)||(20576136-20576205)
chr1 (394-446)||(20607410-20607463)
chr1 (474-515)||(36285698-36285739)
chr1 (88-141)||(49189586-49189639)
chr1 (396-515)||(33643268-33643388)
chr1 (404-467)||(35512969-35513033)
chr1 (393-467)||(8529971-8530046)
chr1 (393-436)||(51303381-51303424)
chr1 (396-515)||(525223-525344)
chr1 (392-467)||(1085485-1085562)
chr1 (391-467)||(7444667-7444744)
chr1 (396-464)||(40709292-40709361)
chr1 (434-467)||(41676453-41676486)
chr1 (474-515)||(42230617-42230658)
chr1 (434-467)||(44210946-44210979)
chr1 (471-515)||(7444571-7444615)
chr1 (396-436)||(20607223-20607263)
chr1 (479-515)||(41676363-41676399)
[»] chr8 (53 HSPs)
chr8 (396-515)||(31543196-31543316)
chr8 (396-515)||(7503078-7503198)
chr8 (404-515)||(7979148-7979260)
chr8 (396-508)||(11033419-11033530)
chr8 (394-515)||(1026973-1027094)
chr8 (404-515)||(1281151-1281263)
chr8 (433-515)||(42650460-42650542)
chr8 (398-515)||(30479841-30479959)
chr8 (393-515)||(6315063-6315182)
chr8 (434-515)||(16652988-16653069)
chr8 (396-515)||(9718603-9718723)
chr8 (404-515)||(11575530-11575642)
chr8 (392-515)||(12022267-12022391)
chr8 (396-515)||(40990308-40990427)
chr8 (436-515)||(41103630-41103709)
chr8 (398-515)||(28083744-28083862)
chr8 (396-515)||(2248452-2248572)
chr8 (392-515)||(10028106-10028230)
chr8 (431-515)||(37032415-37032499)
chr8 (409-515)||(3726979-3727086)
chr8 (434-515)||(11785565-11785646)
chr8 (396-496)||(13404976-13405077)
chr8 (396-467)||(43732859-43732931)
chr8 (404-512)||(33922533-33922637)
chr8 (399-515)||(37923202-37923320)
chr8 (394-515)||(29358463-29358587)
chr8 (413-515)||(31738440-31738543)
chr8 (441-515)||(30664407-30664481)
chr8 (394-483)||(31543070-31543160)
chr8 (394-464)||(8815316-8815387)
chr8 (399-515)||(24243171-24243287)
chr8 (404-464)||(36309018-36309079)
chr8 (396-467)||(3726863-3726935)
chr8 (404-483)||(11575415-11575494)
chr8 (389-467)||(11785698-11785777)
chr8 (398-515)||(16024155-16024274)
chr8 (393-467)||(16024326-16024400)
chr8 (393-463)||(43732676-43732747)
chr8 (396-515)||(4247641-4247764)
chr8 (395-464)||(7394636-7394706)
chr8 (396-464)||(12022142-12022212)
chr8 (394-463)||(30365306-30365376)
chr8 (394-459)||(41103502-41103568)
chr8 (423-483)||(16653105-16653166)
chr8 (396-467)||(8815141-8815213)
chr8 (396-515)||(30365130-30365250)
chr8 (396-467)||(31738595-31738667)
chr8 (477-515)||(34633819-34633857)
chr8 (394-467)||(34634315-34634389)
chr8 (434-515)||(36308881-36308963)
chr8 (423-467)||(30581985-30582030)
chr8 (442-515)||(38198173-38198245)
chr8 (396-436)||(8671998-8672038)
[»] chr3 (51 HSPs)
chr3 (394-515)||(41110445-41110567)
chr3 (392-515)||(24560213-24560337)
chr3 (394-515)||(25655096-25655218)
chr3 (404-515)||(14897984-14898096)
chr3 (392-515)||(21773778-21773902)
chr3 (396-515)||(28582633-28582753)
chr3 (392-511)||(30200219-30200343)
chr3 (404-515)||(46204894-46205006)
chr3 (393-515)||(651737-651851)
chr3 (404-515)||(220521-220633)
chr3 (394-515)||(18654724-18654847)
chr3 (434-515)||(2387884-2387965)
chr3 (396-467)||(24253894-24253966)
chr3 (396-515)||(37102272-37102383)
chr3 (405-515)||(27542055-27542166)
chr3 (393-467)||(34641162-34641237)
chr3 (391-515)||(54574485-54574605)
chr3 (426-515)||(41040074-41040164)
chr3 (434-515)||(46556182-46556263)
chr3 (385-515)||(6803325-6803456)
chr3 (452-515)||(10748421-10748484)
chr3 (398-515)||(43005863-43005981)
chr3 (394-515)||(9312595-9312715)
chr3 (396-483)||(24560373-24560461)
chr3 (412-467)||(26135969-26136025)
chr3 (404-515)||(52473923-52474035)
chr3 (404-511)||(12790381-12790488)
chr3 (393-463)||(28581183-28581254)
chr3 (398-467)||(41110323-41110393)
chr3 (404-515)||(10943738-10943850)
chr3 (440-515)||(52185060-52185136)
chr3 (404-467)||(55428551-55428615)
chr3 (469-515)||(16275829-16275875)
chr3 (394-515)||(17474330-17474452)
chr3 (392-462)||(24253717-24253789)
chr3 (396-508)||(40464002-40464115)
chr3 (414-466)||(52474088-52474141)
chr3 (396-467)||(18654600-18654672)
chr3 (475-515)||(36569027-36569067)
chr3 (392-515)||(44412357-44412481)
chr3 (447-515)||(55327422-55327490)
chr3 (404-462)||(27541939-27541998)
chr3 (404-463)||(51819147-51819206)
chr3 (393-450)||(5903546-5903604)
chr3 (474-508)||(31684365-31684399)
chr3 (433-511)||(37236961-37237038)
chr3 (399-515)||(21090195-21090312)
chr3 (396-464)||(25654971-25655039)
chr3 (434-483)||(30200127-30200176)
chr3 (434-483)||(37102188-37102237)
chr3 (444-515)||(37807129-37807200)
[»] chr6 (46 HSPs)
chr6 (399-512)||(19278165-19278278)
chr6 (392-515)||(14515469-14515591)
chr6 (399-515)||(30487429-30487546)
chr6 (396-515)||(33235951-33236071)
chr6 (398-515)||(2893632-2893750)
chr6 (399-515)||(4097636-4097754)
chr6 (407-515)||(31849121-31849230)
chr6 (396-511)||(12811108-12811224)
chr6 (394-515)||(16738120-16738241)
chr6 (399-515)||(2892727-2892844)
chr6 (399-515)||(21606968-21607085)
chr6 (397-515)||(9719155-9719273)
chr6 (394-482)||(10818227-10818316)
chr6 (397-492)||(10818364-10818459)
chr6 (455-513)||(5585428-5585486)
chr6 (436-510)||(6034201-6034275)
chr6 (394-467)||(9721136-9721210)
chr6 (394-515)||(1390317-1390440)
chr6 (434-515)||(1300658-1300740)
chr6 (394-467)||(9719029-9719103)
chr6 (453-515)||(13583777-13583839)
chr6 (394-474)||(1300785-1300866)
chr6 (399-515)||(33041473-33041590)
chr6 (394-515)||(23090993-23091115)
chr6 (457-515)||(34176397-34176455)
chr6 (394-462)||(30487304-30487373)
chr6 (396-515)||(9721262-9721381)
chr6 (396-501)||(15323225-15323331)
chr6 (396-464)||(15353364-15353433)
chr6 (399-515)||(30850036-30850153)
chr6 (392-467)||(4097231-4097307)
chr6 (396-489)||(9298636-9298735)
chr6 (452-515)||(10348922-10348986)
chr6 (392-508)||(14548737-14548850)
chr6 (404-463)||(19278042-19278102)
chr6 (404-466)||(23091131-23091195)
chr6 (396-462)||(14515648-14515715)
chr6 (393-467)||(33236122-33236197)
chr6 (394-436)||(9051736-9051778)
chr6 (394-462)||(665839-665907)
chr6 (452-508)||(1395692-1395749)
chr6 (435-472)||(2893013-2893050)
chr6 (408-449)||(14548629-14548670)
chr6 (426-515)||(26318336-26318425)
chr6 (391-466)||(9051529-9051605)
chr6 (434-466)||(21606883-21606915)
[»] scaffold0096 (1 HSPs)
scaffold0096 (396-515)||(6584-6704)
[»] scaffold0262 (2 HSPs)
scaffold0262 (434-515)||(16420-16501)
scaffold0262 (393-462)||(16293-16363)
[»] scaffold0026 (2 HSPs)
scaffold0026 (399-490)||(1175-1267)
scaffold0026 (394-485)||(1552-1644)
[»] scaffold0171 (1 HSPs)
scaffold0171 (440-513)||(15995-16068)
[»] scaffold0240 (1 HSPs)
scaffold0240 (392-463)||(17716-17786)
[»] scaffold0198 (1 HSPs)
scaffold0198 (399-483)||(3150-3235)
[»] scaffold0007 (1 HSPs)
scaffold0007 (404-467)||(242388-242452)
[»] scaffold0294 (1 HSPs)
scaffold0294 (452-515)||(15320-15383)
[»] scaffold0341 (1 HSPs)
scaffold0341 (435-515)||(18811-18890)
[»] scaffold0012 (1 HSPs)
scaffold0012 (404-467)||(184779-184843)
[»] scaffold0119 (1 HSPs)
scaffold0119 (388-515)||(37375-37503)


Alignment Details
Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 242 - 515
Target Start/End: Original strand, 26414742 - 26415013
Alignment:
Q  242 gtgtgatggtaggcattgaagaagtattttgaatcgcacaatatcatagtattttgaaagagaaaataccattttaacaatattaagttgatatatattt 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  26414742 gtgtgatggtaggcattgaagaagtattttgaatcgcacaatatcatagtattttgaaagagaaaataccattttaaca---ttaagttgatatatattt 26414838  T
Q  342 ggaataagtagtaatttggcaatgagcttatattgagagacaaaataaaatctaagggtgtatttggattgagggtttagaaggggaaggga-gggaggg 440  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| |||||||    
T  26414839 ggaataagtagtaatttggcaatgagcttatattgagagacaaaataaaatctaagggtgtgtttggattgagggtttaggaggagaagggaggggaggg 26414938  T
Q  441 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26414939 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 26415013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 26414203 - 26414407
Alignment:
Q  16 atcttgctcttatatatta--agtccgtttaggttttgagacatactataagcacattaattttcctattttcctattgaagttgtattagattatcaca 113  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||     |||||    
T  26414203 atcttgctcttatatattacaagtccgtttaggttttgagacatactgtaagcacattaattttcctattttcctattgaagttgtatta-----tcaca 26414297  T
Q  114 ttcccaatgttttcgagttgtgcaatgttttcctagttaatgagagtgagatctaagttaatttagcatgataccaaagtcggattttgtaggatatatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26414298 ttcccaatgttttcgagttgtgcaatgttttcctagttaatgagagtgagatctaagttaatttagcatgataccaaagtcggattttgtaggatatatg 26414397  T
Q  214 gaatatggac 223  Q
    ||||||||||    
T  26414398 gaatatggac 26414407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 393 - 515
Target Start/End: Original strand, 13634708 - 13634831
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    |||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  13634708 ctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaata 13634807  T
Q  492 tattaagtgtgattgaagtattat 515  Q
     |||| ||||||||||| ||||||    
T  13634808 aattatgtgtgattgaattattat 13634831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 393 - 515
Target Start/End: Original strand, 7544133 - 7544256
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    |||||||||| |||||||||||||||||| | |||||||||||| |||| | | ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  7544133 ctaagggtgtgtttggattgagggtttaggaagggaagggaggggagggctaaattttcttttttaaattacggactatataacatgtttttctaaaata 7544232  T
Q  492 tattaagtgtgattgaagtattat 515  Q
     || ||||||||||||||||||||    
T  7544233 aatcaagtgtgattgaagtattat 7544256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 396 - 515
Target Start/End: Original strand, 16938479 - 16938599
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||||||||||| |||||||||||||| |||||||  ||||| ||||||| ||||||||||||| |||||||| ||||||||| ||    
T  16938479 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacggactatataacatgtttctctaaaataaat 16938578  T
Q  495 taagtgtgattgaagtattat 515  Q
    |||||||||||||| ||||||    
T  16938579 taagtgtgattgaaatattat 16938599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 392 - 515
Target Start/End: Complemental strand, 28279725 - 28279600
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaa 489  Q
    ||||||||||| ||||||||||| || || |||||||||||||| ||||||||||||||| ||||||||||| ||| ||||| ||||| |||||||||||    
T  28279725 tctaagggtgtgtttggattgagagtctataaggggaagggaggagagggtttacttttcctttttaaattatggaatatataacatgttttttctaaaa 28279626  T
Q  490 tatattaagtgtgattgaagtattat 515  Q
    || | |||||||||||||||||||||    
T  28279625 taaactaagtgtgattgaagtattat 28279600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 404 - 515
Target Start/End: Complemental strand, 2550588 - 2550476
Alignment:
Q  404 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 502  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| |||||||  | |||||||||| ||||||||||||| |||| |||| |||||    
T  2550588 tttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaagattcggactatataacatgtttttctataataaattacgtgtg 2550489  T
Q  503 attgaagtattat 515  Q
    |||||||||||||    
T  2550488 attgaagtattat 2550476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 394 - 515
Target Start/End: Original strand, 10476024 - 10476148
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaa-ttacggactatatg-acatgtttttctaaaat 490  Q
    ||||||||| |||| ||||||||||||| ||||||||||| | ||||||||||||||| |||||||| |||| || |||||  |||||||||||||||||    
T  10476024 taagggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaaattacagattatatatacatgtttttctaaaat 10476123  T
Q  491 atattaagtgtgattgaagtattat 515  Q
    | |||||||||||||||||||||||    
T  10476124 aaattaagtgtgattgaagtattat 10476148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 394 - 501
Target Start/End: Complemental strand, 20147116 - 20147014
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 493  Q
    ||||||||| |||||||||||||||||| ||||||||||    |||||||||||||| ||||||||||||||| ||||| |||||||||||||||||| |    
T  20147116 taagggtgtgtttggattgagggtttaggaggggaaggg----agggtttacttttcatttttaaattacggattatat-acatgtttttctaaaataaa 20147022  T
Q  494 ttaagtgt 501  Q
    ||||||||    
T  20147021 ttaagtgt 20147014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 36392395 - 36392274
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    |||||| || |||||||||||||||||| |||||||| ||| || | |||||  |||||||||||||||||||||||||| | || |||| ||||||||     
T  36392395 taagggcgtgtttggattgagggtttaggaggggaagagagcggtgtgtttatatttcgtttttaaattacggactatataatatatttt-ctaaaatag 36392297  T
Q  493 attaagtgtgattgaagtattat 515  Q
    |||||||||||||||||||||||    
T  36392296 attaagtgtgattgaagtattat 36392274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 390 - 515
Target Start/End: Original strand, 40815291 - 40815416
Alignment:
Q  390 aatctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaa 488  Q
    ||||||||||||| |||||||||| | ||||| ||||||||||| | |||| |||||||||| |||||||||||| |||||||| |||||||||| ||||    
T  40815291 aatctaagggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattacagactatataacatgtttttataaa 40815390  T
Q  489 atatattaagtgtgattgaagtattat 515  Q
    ||| |  ||||||||||||| ||||||    
T  40815391 ata-aaaaagtgtgattgaaatattat 40815416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 4373810 - 4373690
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||||||||||| | |||||   || ||||| |||||||||| ||||||||||||||||||||| ||| ||||||  |||||| ||    
T  4373810 agggtgtgtttggattgagggtttaggaagggaaaatagtggaggatttacttttcttttttaaattacggactatataacaagttttttaaaaataaat 4373711  T
Q  495 taagtgtgattgaagtattat 515  Q
    |||||||||||||| ||||||    
T  4373710 taagtgtgattgaaatattat 4373690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 404 - 515
Target Start/End: Original strand, 36363040 - 36363152
Alignment:
Q  404 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 502  Q
    |||||||||||||||||||||||||| |||||| || ||||| ||||| | |||||| |||| ||||||| |||||||||||||||||| || ||||||     
T  36363040 tttggattgagggtttagaaggggaatggaggggagagtttaattttcttgtttaaactacgtactatataacatgtttttctaaaataaatcaagtgtc 36363139  T
Q  503 attgaagtattat 515  Q
    |||||||| ||||    
T  36363140 attgaagttttat 36363152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 404 - 515
Target Start/End: Original strand, 11756886 - 11756997
Alignment:
Q  404 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtga 503  Q
    |||||||||||||||||| |||||| ||  ||||| ||||  ||||  ||||||||||||| ||||||| |||||||| ||||||||| |||||||||||    
T  11756886 tttggattgagggtttaggaggggagggatgggagagtttgtttttattttttaaattacgaactatataacatgtttctctaaaataaattaagtgtga 11756985  T
Q  504 ttgaagtattat 515  Q
    || |||||||||    
T  11756986 ttaaagtattat 11756997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 394 - 509
Target Start/End: Original strand, 14681468 - 14681583
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 493  Q
    |||| |||| |||||||||||||||||| ||||||||| || || |||| | ||||| |||||||||||| || ||||| |||||||||| ||||||| |    
T  14681468 taagtgtgtgtttggattgagggtttaggaggggaaggaagtgatggttaaattttcttttttaaattacagattatataacatgtttttttaaaataaa 14681567  T
Q  494 ttaagtgtgattgaag 509  Q
    |||| |||||||||||    
T  14681568 ttaaatgtgattgaag 14681583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 434 - 515
Target Start/End: Original strand, 9856919 - 9857000
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||| ||||| ||||| ||||||||||| ||||||||| |||||||||||||||||| || ||||||||||||||||||||    
T  9856919 gggagagtttagttttcttttttaaattaaggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattat 9857000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 388 - 467
Target Start/End: Complemental strand, 1658065 - 1657985
Alignment:
Q  388 aaaatctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||||| ||||| ||||||| |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  1658065 aaaatctaaaggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggac 1657985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 404 - 512
Target Start/End: Original strand, 10650435 - 10650546
Alignment:
Q  404 tttggattgagggtttagaaggggaa--gggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtg 500  Q
    ||||||| |||| ||||| |||||||  ||||||| ||| |||||||||  ||||||||||||||||  ||||| |||||||||||||||| ||||||||    
T  10650435 tttggatggaggatttaggaggggaaaagggaggggaggatttactttttatttttaaattacggacactatgaaatgtttttctaaaataaattaagtg 10650534  T
Q  501 tgattgaagtat 512  Q
    ||||||||||||    
T  10650535 tgattgaagtat 10650546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 392 - 467
Target Start/End: Original strand, 14245084 - 14245160
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||||||| |||||||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||    
T  14245084 tctaagggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggac 14245160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 398 - 508
Target Start/End: Original strand, 22022849 - 22022963
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaagggagg-gagggttta---cttttcgtttttaaattacggactatatgacatgtttttctaaaatata 493  Q
    ||||| |||||||||||||||||| ||||||| ||||| |||| ||||    ||||  ||||||||||||||||||||| |||| ||||||||||||| |    
T  22022849 ggtgtgtttggattgagggtttaggaggggaatggaggagaggatttagttttttttttttttaaattacggactatataacatatttttctaaaataaa 22022948  T
Q  494 ttaagtgtgattgaa 508  Q
    |||||||||||||||    
T  22022949 ttaagtgtgattgaa 22022963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 397 - 483
Target Start/End: Complemental strand, 13634954 - 13634867
Alignment:
Q  397 gggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||| ||  ||||| ||||||||    
T  13634954 gggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaacactatgaaatgttttt 13634867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 457 - 515
Target Start/End: Complemental strand, 8503017 - 8502959
Alignment:
Q  457 aaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  8503017 aaattacggactatataacatgcttttctaaaataaattaagtgtgattgaagtattat 8502959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 426 - 515
Target Start/End: Complemental strand, 9798826 - 9798736
Alignment:
Q  426 ggaagggagggaggg-tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||||| || |||||||||| |||| ||||||| || ||||| |||||||||||| ||||| ||||| |||||||||||||||||    
T  9798826 ggaagggagggaaggatttacttttctttttaaaattacagattatataacatgtttttcttaaataaattaattgtgattgaagtattat 9798736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 515
Target Start/End: Complemental strand, 10072845 - 10072771
Alignment:
Q  441 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||| |||||||||||| |||  ||| |||||||||||||||||| ||||||| |||||||||||||||    
T  10072845 tttacttttcttttttaaattaccgacggtataacatgtttttctaaaataaattaagtatgattgaagtattat 10072771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 14245290 - 14245218
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||||||  ||||| ||||||||||||||||    
T  14245290 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggac 14245218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 393 - 515
Target Start/End: Original strand, 10204573 - 10204696
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    |||||||||| ||||||| |||||||||| ||||||||||||| ||||| | ||||||  ||||||||||||  || || | | |||| ||| |||||||    
T  10204573 ctaagggtgtgtttggatcgagggtttaggaggggaagggaggtgagggctcacttttattttttaaattaccaacaatgtaaaatgtctttttaaaata 10204672  T
Q  492 tattaagtgtgattgaagtattat 515  Q
     |||||||||  ||||||||||||    
T  10204673 aattaagtgtttttgaagtattat 10204696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 11436937 - 11437016
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatat 472  Q
    |||||| || |||||||||||||||||| |||||||||||| |||||| ||||||| | |||||||||||||||| ||||    
T  11436937 taagggcgtgtttggattgagggtttaggaggggaagggagaggagggcttactttccttttttaaattacggacaatat 11437016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 393 - 515
Target Start/End: Complemental strand, 15986871 - 15986748
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    |||||||||| |||||||||||||||||| ||||||||| || |||||| | ||||||  ||||||||||||| || || | | |||| ||| |||||||    
T  15986871 ctaagggtgtgtttggattgagggtttaggaggggaaggaagaggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaaata 15986772  T
Q  492 tattaagtgtgattgaagtattat 515  Q
     |||||||||  || |||||||||    
T  15986771 aattaagtgtttttaaagtattat 15986748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 440 - 515
Target Start/End: Original strand, 37606940 - 37607014
Alignment:
Q  440 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||||||||||||| ||||||||| | |||||||| ||||||| ||||  |||||||||||||||||    
T  37606940 gtttacttttcgtttttaaattaaggactatat-aaatgtttttttaaaataaattatatgtgattgaagtattat 37607014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 398 - 515
Target Start/End: Original strand, 42681450 - 42681573
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgttttta-----aattacggactatatgacatgtttttctaaaata 491  Q
    ||||| |||||||||||||||||  ||||||| |||||| ||| |||||||||  |||||      ||||||||||||||| ||||||||||||||||||    
T  42681450 ggtgtgtttggattgagggtttaagaggggaaaggaggggaggatttactttttttttttttttttaattacggactatataacatgtttttctaaaata 42681549  T
Q  492 tattaagtgtgattgaagtattat 515  Q
      || ||||||||| |||||||||    
T  42681550 attttagtgtgattaaagtattat 42681573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 515
Target Start/End: Original strand, 34980812 - 34980930
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 496  Q
    ||||| |||||||||| ||||||| |||||||||||||| |||||| ||||||  ||||||||||||| || |  | | || ||||| ||||||| ||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattacgaacaacgtaaaatatttttttaaaataaatta 34980911  T
Q  497 agtgtgattgaagtattat 515  Q
    |||||  ||||||||||||    
T  34980912 agtgtttttgaagtattat 34980930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 14684728 - 14684606
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttcta--aaatat 492  Q
    ||||||| |||||||| ||||||||| ||||| || ||| |||||| ||||||||| ||||| |||||||| | |||| | |||||||| |   |||||     
T  14684728 agggtgtgtttggatttagggtttaggaggggcagagagaggagggcttacttttctttttttaattacgggcaatataaaatgttttttttttaaataa 14684629  T
Q  493 attaagtgtgattgaagtattat 515  Q
    |||||||||||||||| ||||||    
T  14684628 attaagtgtgattgaaatattat 14684606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 440 - 515
Target Start/End: Original strand, 37551453 - 37551527
Alignment:
Q  440 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||||||||||||| ||||||||| | | ||||||  |||||| |||| ||||||||||||||||||    
T  37551453 gtttacttttcgtttttaaattatggactatat-aaaagttttttaaaaataaattatgtgtgattgaagtattat 37551527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 440 - 515
Target Start/End: Original strand, 37654283 - 37654357
Alignment:
Q  440 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||||||||||||| ||||||||| | | ||||||  |||||| |||| ||||||||||||||||||    
T  37654283 gtttacttttcgtttttaaattatggactatat-aaaagttttttaaaaataaattatgtgtgattgaagtattat 37654357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 398 - 483
Target Start/End: Complemental strand, 7544378 - 7544292
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    ||||| ||||||| |||||||||| ||||||||| |||| |||||||  ||||| ||||||||||||||||  ||||| ||||||||    
T  7544378 ggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacggacactatgaaatgttttt 7544292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 440 - 497
Target Start/End: Complemental strand, 11419360 - 11419303
Alignment:
Q  440 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 497  Q
    ||||||||||| ||||||||||||||  ||||| |||||||||||||||||| |||||    
T  11419360 gtttacttttcttttttaaattacgggttatataacatgtttttctaaaataaattaa 11419303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 515
Target Start/End: Complemental strand, 16502034 - 16501914
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaagggagggagggt--ttacttttcgtttttaaattacggactatatgacat-gtttttctaaaatatat 494  Q
    ||||| |||||||||||||||||| |||| ||| ||||| | |   ||||||||  |||||||||||||||||||||  |||  ||||||||||||| ||    
T  16502034 ggtgtgtttggattgagggtttaggagggaaagagagggggagaaattacttttattttttaaattacggactatatatcatattttttctaaaataaat 16501935  T
Q  495 taagtgtgattgaagtattat 515  Q
     |||||||||| |||| ||||    
T  16501934 caagtgtgattaaagttttat 16501914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 501
Target Start/End: Complemental strand, 33744440 - 33744331
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    ||||||||||||||||||||||||||||| ||  ||||||| ||||||| | ||||||   |||||||||||| || ||   | |||||||| |||||||    
T  33744440 ctaagggtgtatttggattgagggtttaggagatgaagggaggggagggctcacttttatattttaaattacgaacaattcaaaatgtttttttaaaata 33744341  T
Q  492 tattaagtgt 501  Q
     |||||||||    
T  33744340 aattaagtgt 33744331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 440 - 515
Target Start/End: Original strand, 37779150 - 37779223
Alignment:
Q  440 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||||||||||||| ||||  ||| | |||||||| ||||||| ||||  |||||||||||||||||    
T  37779150 gtttacttttcgtttttaaattaaggac--tattaaatgtttttttaaaataaattatatgtgattgaagtattat 37779223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 466
Target Start/End: Complemental strand, 36363268 - 36363205
Alignment:
Q  404 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacgga 466  Q
    ||||||| |||||||||| ||||||||||||| ||| ||| ||||||| |||||||||||||||    
T  36363268 tttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacgga 36363205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 483
Target Start/End: Complemental strand, 16938725 - 16938635
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    ||||||||| ||||||| |||||||||| || |||| |||||| ||||||||  |||| |||||||||||| |||  ||||| ||||||||    
T  16938725 taagggtgtgtttggatggagggtttaggagaggaatggaggggagggtttagatttcatttttaaattactgacactatgaaatgttttt 16938635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 434 - 515
Target Start/End: Original strand, 5688452 - 5688533
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||| ||||||  ||||||||||||| || || | | |||||||| ||||||| |||||||||  ||||||||||||    
T  5688452 gggagggttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattat 5688533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 464
Target Start/End: Complemental strand, 10476272 - 10476203
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 464  Q
    ||||||| ||||||| |||||||||| ||||||||||| ||||| |||||||| |  |||||||||||||    
T  10476272 agggtgtgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacg 10476203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 11437186 - 11437149
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga 433  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  11437186 agggtgtttttggattgagggtttagaaggggaaggga 11437149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 467
Target Start/End: Complemental strand, 11757144 - 11757075
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 467  Q
    |||| ||||||| |||||||||  |||||||||||||| ||||||||  |||| ||||||||||||||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttagatttcatttttaaattacggac 11757075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 515
Target Start/End: Complemental strand, 20513682 - 20513573
Alignment:
Q  395 aagggtgtatttggattgagggtttag-aaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 493  Q
    |||||||| |||||||||||||||||| ||| | || | ||| ||| |||||||||| |||||||||||||            ||||||| ||||||| |    
T  20513682 aagggtgtgtttggattgagggtttaggaagcgaaaagaaggaaggatttacttttcttttttaaattacg------------tgtttttataaaataaa 20513595  T
Q  494 ttaagtgtgattgaagtattat 515  Q
    ||||||||||||||||||||||    
T  20513594 ttaagtgtgattgaagtattat 20513573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 467
Target Start/End: Original strand, 33744193 - 33744265
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 467  Q
    ||||||| ||||||| ||||||| ||  || |||||||||| |||||||||||||| ||||||||||| ||||    
T  33744193 agggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaattatggac 33744265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 466
Target Start/End: Complemental strand, 10650658 - 10650587
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacgga 466  Q
    ||||||| ||||||||||  |||| | ||||||||||||| ||  |||||||||| ||||||||||||||||    
T  10650658 agggtgtgtttggattgaaagtttgggaggggaagggaggagaaagtttactttttgtttttaaattacgga 10650587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 436
Target Start/End: Complemental strand, 40305912 - 40305869
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggaggg 436  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||    
T  40305912 ctaagggtgtgtttggattgagggtttaggaggagaagggaggg 40305869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 488
Target Start/End: Original strand, 2550391 - 2550445
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaa 488  Q
    ||||||||||||||||| |||||||||||| |||  ||||| |||||||| ||||    
T  2550391 gggagggtttacttttcatttttaaattacagacactatgatatgtttttttaaa 2550445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 467
Target Start/End: Original strand, 8502833 - 8502907
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||||| ||||||| || ||||||  | ||||| ||| ||||||||| ||||||| ||||||||||||||||    
T  8502833 taagggtgtgtttggatggatggtttatgaagggaatggatgggagggttcacttttcatttttaaattacggac 8502907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 5688634 - 5688597
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga 433  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  5688634 agggtgtgtttggattgagggtttaggaggggaaggga 5688597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 515
Target Start/End: Original strand, 13298313 - 13298386
Alignment:
Q  442 ttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||| |||||||||| ||||| |||| | | ||||||  || ||| ||||||||||||| |||||||||    
T  13298313 ttacttttcttttttaaattgcggacaatataaaacgtttttgcaatataaattaagtgtgatttaagtattat 13298386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 515
Target Start/End: Complemental strand, 17024389 - 17024348
Alignment:
Q  474 acatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||||||||||| |||||||  ||||||||||||||    
T  17024389 acatgtttttctaaaataaattaagtacgattgaagtattat 17024348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 512
Target Start/End: Original strand, 21580947 - 21581064
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||||||||||||| |||||| | || | |||||| ||||||| | ||||||  ||| ||||||||| || || | | || ||||| ||||||| ||    
T  21580947 agggtgtatttggattgggggttttggagagaaagggaggggaggggtcacttttattttctaaattacgaacaatgtaaaatatttttttaaaataaat 21581046  T
Q  495 taagtgtgattgaagtat 512  Q
    |||||||  |||||||||    
T  21581047 taagtgtttttgaagtat 21581064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 421
Target Start/End: Original strand, 35176756 - 35176789
Alignment:
Q  388 aaaatctaagggtgtatttggattgagggtttag 421  Q
    |||| |||||||||||||||||||||||||||||    
T  35176756 aaaaactaagggtgtatttggattgagggtttag 35176789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 459
Target Start/End: Complemental strand, 37551649 - 37551585
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaa 459  Q
    ||||||| ||||||| |||||||||  |||| ||||||| ||| |||||||||||| ||||||||    
T  37551649 agggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaa 37551585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 459
Target Start/End: Complemental strand, 37654479 - 37654415
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaa 459  Q
    ||||||| ||||||| |||||||||  |||| ||||||| ||| |||||||||||| ||||||||    
T  37654479 agggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaa 37654415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 40305670 - 40305710
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg 436  Q
    ||||||| ||||||| |||||||||| ||||||||||||||    
T  40305670 agggtgtgtttggatggagggtttaggaggggaagggaggg 40305710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 36347785 - 36347665
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  36347785 agggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaat 36347686  T
Q  495 taagtgtgattgaagtattat 515  Q
    |||||||||||||||||||||    
T  36347685 taagtgtgattgaagtattat 36347665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 391 - 515
Target Start/End: Complemental strand, 15224943 - 15224818
Alignment:
Q  391 atctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaa 489  Q
    |||||||||||| |||||||  ||||||||| |||||||||||||| | |||||||||||| |||||||||||||| |||||| ||||||||||||| ||    
T  15224943 atctaagggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgggctatataacatgtttttctagaa 15224844  T
Q  490 tatattaagtgtgattgaagtattat 515  Q
    || |||||||||||||||||||||||    
T  15224843 taaattaagtgtgattgaagtattat 15224818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 396 - 515
Target Start/End: Original strand, 35736175 - 35736295
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||||||||||| |||||||||||||| |||| ||| ||||| ||||||||| |||||||| || |||||||||||||||||| ||    
T  35736175 agggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaatcacggactagataacatgtttttctaaaataaat 35736274  T
Q  495 taagtgtgattgaagtattat 515  Q
     |||||||| |||||||||||    
T  35736275 gaagtgtgactgaagtattat 35736295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 390 - 515
Target Start/End: Original strand, 41778767 - 41778893
Alignment:
Q  390 aatctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaa 488  Q
    ||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||    ||||||||| ||||  ||| | |||||||| ||||    
T  41778767 aatctaagggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttgtactttaaattatggacagtataaaatgtttttttaaa 41778866  T
Q  489 atatattaagtgtgattgaagtattat 515  Q
    ||| |||||||||||||||||||||||    
T  41778867 ataaattaagtgtgattgaagtattat 41778893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 404 - 515
Target Start/End: Complemental strand, 8427107 - 8426995
Alignment:
Q  404 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 502  Q
    |||||||||||||||||| |||| ||||||||| || ||||||||||| |||||||| ||| ||| |||| |||||||||||||||||| |||||||| |    
T  8427107 tttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaagtacagacgatataacatgtttttctaaaataaattaagtgcg 8427008  T
Q  503 attgaagtattat 515  Q
    |||||||||||||    
T  8427007 attgaagtattat 8426995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 39732972 - 39732853
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||| |||||   ||||||||| | |||| | |||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  39732972 agggtgtgtttggattgaaggtttgagaggggaaggaaagggatgatttacttttcgtttttaaattacggactatat-acatgtttttctaaaataaat 39732874  T
Q  495 taagtgtgattgaagtattat 515  Q
    ||||| |||||||||||||||    
T  39732873 taagtatgattgaagtattat 39732853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 19567062 - 19566945
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 493  Q
    |||| |||| |||||||||||||||||| || ||| |||||||    |||| |||   ||||||||||||||||||||| |||||||||||||||||| |    
T  19567062 taagagtgtgtttggattgagggtttaggagaggaggggaggg----tttaatttcattttttaaattacggactatataacatgtttttctaaaataaa 19566967  T
Q  494 ttaagtgtgattgaagtattat 515  Q
    ||||||||||||||||||||||    
T  19566966 ttaagtgtgattgaagtattat 19566945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 398 - 515
Target Start/End: Complemental strand, 36046443 - 36046328
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 497  Q
    ||||| |||||||||||||||||  ||||||||||||||  |||||||||||  |||||||||||||||| |||| ||||| |||| ||||||| |||      
T  36046443 ggtgtgtttggattgagggtttatgaggggaagggaggggaggtttacttttgttttttaaattacggacgatataacatgcttttataaaataaatt-- 36046346  T
Q  498 gtgtgattgaagtattat 515  Q
    | ||||||||||||||||    
T  36046345 gagtgattgaagtattat 36046328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 387 - 515
Target Start/End: Original strand, 9426976 - 9427105
Alignment:
Q  387 taaaatctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttct 485  Q
    |||| ||||| ||||| ||||||||||  |||||| ||||||||||||| ||||||||  ||||| ||||||||||||  ||||||| |||||||||||     
T  9426976 taaactctaatggtgtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattaccaactatataacatgtttttca 9427075  T
Q  486 aaaatatattaagtgtgattgaagtattat 515  Q
    ||| || |||| | ||||||||||||||||    
T  9427076 aaactaaattatgcgtgattgaagtattat 9427105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 434 - 515
Target Start/End: Original strand, 23748134 - 23748215
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||| ||||| |||||||| |||||||||||| ||||||||||| |||||| || ||||||||||||||||||||    
T  23748134 gggagggtttagttttcttttttaaactacggactatataacatgtttttcaaaaataaatcaagtgtgattgaagtattat 23748215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 398 - 515
Target Start/End: Original strand, 2241413 - 2241530
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 496  Q
    ||||| ||| ||||||||||| || |||||||||||||| || ||||||||||   || ||||||||||||||||| | | |||||||||||||| ||||    
T  2241413 ggtgtgtttagattgagggtt-aggaggggaagggaggggagagtttacttttttattataaattacggactatataatacgtttttctaaaataaatta 2241511  T
Q  497 agtgtgattgaagtattat 515  Q
    ||||| |||||||||||||    
T  2241512 agtgtaattgaagtattat 2241530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 404 - 515
Target Start/End: Complemental strand, 31796000 - 31795893
Alignment:
Q  404 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtga 503  Q
    |||||||||| ||||||| |||||||||||||||    ||| ||||| ||| ||||| ||||| || || |||||||||| ||||||| |||||||||||    
T  31796000 tttggattgaaggtttaggaggggaagggaggga----ttaattttcttttctaaatcacggagtaaataacatgtttttttaaaataaattaagtgtga 31795905  T
Q  504 ttgaagtattat 515  Q
    ||||||||||||    
T  31795904 ttgaagtattat 31795893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 399 - 515
Target Start/End: Complemental strand, 36567093 - 36566975
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaagggagg-gagggtttactttt-cgtttttaaattacggactatatgacatgtttttctaaaatatatta 496  Q
    |||| |||||||||||||||||| |||||||  |||| || | ||||||||| ||||||||||||| | | ||||| ||||||||||||| |||| ||||    
T  36567093 gtgtgtttggattgagggtttaggaggggaatagaggagatgatttactttttcgtttttaaattatgaattatataacatgtttttctataataaatta 36566994  T
Q  497 agtgtgattgaagtattat 515  Q
    | |||||||||||||||||    
T  36566993 attgtgattgaagtattat 36566975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 398 - 515
Target Start/End: Original strand, 41841684 - 41841802
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 496  Q
    ||||| |||||||||||| ||||| |||| |||||| ||||||||||  ||||| ||||||||||||  ||||||| |||| |||| |||||||| ||||    
T  41841684 ggtgtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattaccaactatataacatattttcctaaaataaatta 41841783  T
Q  497 agtgtgattgaagtattat 515  Q
    || ||||||| ||||||||    
T  41841784 agggtgattggagtattat 41841802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 434 - 515
Target Start/End: Original strand, 39821708 - 39821789
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||||||| ||||||||||| ||| | ||| |||||||||||||||||| |||||||| |||| |||||||||    
T  39821708 gggagggtttacttttcatttttaaattatggattctataacatgtttttctaaaataaattaagtgcgatttaagtattat 39821789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 511
Target Start/End: Original strand, 12541767 - 12541882
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacat-gtttttctaaaata 491  Q
    ||||| |||| |||||||||||||||||| |||||| ||||| |    | |||||||| ||||||||||||||||||||| | ||  |||||||||||||    
T  12541767 ctaagagtgtgtttggattgagggtttaggaggggaggggagag----tctacttttcttttttaaattacggactatataaaatattttttctaaaata 12541862  T
Q  492 tattaagtgtgattgaagta 511  Q
     |||||||| ||||||||||    
T  12541863 aattaagtgcgattgaagta 12541882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 515
Target Start/End: Original strand, 40022363 - 40022490
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttt--------taaattacggactatatgacatgtttttctaa 487  Q
    ||||||| |||||||||||||||||| |||| ||||| ||||||||||  ||||  ||||        ||||||| | ||||||| |||||||||| |||    
T  40022363 agggtgtgtttggattgagggtttaggagggtaagggggggagggtttgttttttttttttttttttttaaattatgaactatataacatgtttttgtaa 40022462  T
Q  488 aatatattaagtgtgattgaagtattat 515  Q
    |||| |||||||||||||||||||||||    
T  40022463 aataaattaagtgtgattgaagtattat 40022490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 405 - 515
Target Start/End: Original strand, 886927 - 887036
Alignment:
Q  405 ttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtga 503  Q
    |||| |||||||||||| ||||||||| | ||||||| ||||||||| ||||||||||||  || |||| | ||| |||| ||||||| |||| ||||||    
T  886927 ttgggttgagggtttaggaggggaaggtaagggagggcttacttttcttttttaaattac--acaatataaaatgcttttttaaaataaattatgtgtga 887024  T
Q  504 ttgaagtattat 515  Q
    ||||||||||||    
T  887025 ttgaagtattat 887036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 442 - 501
Target Start/End: Complemental strand, 9592032 - 9591973
Alignment:
Q  442 ttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 501  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  9592032 ttactttttttttttaaattacgcactatataacatgtttttctaaaatatattaagtgt 9591973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 2381233 - 2381111
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||||||||||||||||| |||||||  |||| | ||||||| || ||| ||||||  ||||||||||||| || || | | |||||||| |||||||     
T  2381233 taagggtgtatttggattgtgggtttatgagggaatgggaggggagagttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataa 2381134  T
Q  493 attaagtgtgattgaagtattat 515  Q
    |||||||||  ||||||||||||    
T  2381133 attaagtgtttttgaagtattat 2381111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 394 - 467
Target Start/End: Complemental strand, 9631806 - 9631732
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggac 467  Q
    ||||||||| ||||||| |||||||||| |||| |||||||  ||||||| ||||||||||||||||||||||||    
T  9631806 taagggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacggac 9631732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 452 - 515
Target Start/End: Original strand, 16565832 - 16565897
Alignment:
Q  452 tttttaaattacggactatatg--acatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||| |||||||   |||||||||||||||||| |||||||||||||||||||||||    
T  16565832 tttttaaattacgaactatatataacatgtttttctaaaataaattaagtgtgattgaagtattat 16565897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 394 - 467
Target Start/End: Complemental strand, 23748341 - 23748267
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||||| ||||||| |||||||||| ||||||||||| ||||||||| ||||||| |||||||| |||||||    
T  23748341 taagggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggac 23748267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 440 - 514
Target Start/End: Complemental strand, 28262642 - 28262568
Alignment:
Q  440 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtatta 514  Q
    ||||||||||| |||||||||||  |||||||| |||||||||||||||||| ||||  |||||||||| |||||    
T  28262642 gtttacttttcttttttaaattattgactatataacatgtttttctaaaataaattacatgtgattgaaatatta 28262568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 22356248 - 22356176
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||| |||||||||||| ||||| ||||||||||| ||||||||| | ||||| ||||||||||||||||    
T  22356248 agggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacggac 22356176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 392 - 467
Target Start/End: Complemental strand, 35736435 - 35736359
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||||||| ||||||| |||||||||| ||| ||||||| ||||||| | |||||||||||||||||| |||||    
T  35736435 tctaagggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatttcggac 35736359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 432 - 515
Target Start/End: Complemental strand, 29525940 - 29525857
Alignment:
Q  432 gagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||  |||| ||||| ||||||||| ||||| ||||| | |||||||| ||||||| ||||| |||||||||||||||||    
T  29525940 gagggagattttatttttcttttttaaatcacggaatatataatatgtttttttaaaataaattaaatgtgattgaagtattat 29525857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 386 - 515
Target Start/End: Complemental strand, 3094607 - 3094477
Alignment:
Q  386 ataaaatctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttc 484  Q
    ||||||||||| ||||| |||||||||||||||||| | || ||||||||| | |  | ||||||  ||||||||||||  ||||| | | |||||||||    
T  3094607 ataaaatctaacggtgtgtttggattgagggtttaggaaggaaagggaggggaagactcacttttattttttaaattacaaactatgtaaaatgtttttc 3094508  T
Q  485 taaaatatattaagtgtgattgaagtattat 515  Q
    ||||||| |||  ||||  ||||||||||||    
T  3094507 taaaataaatttcgtgtttttgaagtattat 3094477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 398 - 483
Target Start/End: Original strand, 8426881 - 8426967
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    |||||||||| || ||| |||||| ||||||||||| ||||||||||||||||  ||||||||||| ||||  ||||| ||||||||    
T  8426881 ggtgtatttgaatggagagtttaggaggggaagggaagggagggtttacttttaatttttaaattaaggacactatgaaatgttttt 8426967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 394 - 467
Target Start/End: Complemental strand, 17380087 - 17380013
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||||| |||||||||||||||||| |||||||| || |||| |||||  ||||| ||||||||||||||||    
T  17380087 taagggtgtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacggac 17380013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 394 - 515
Target Start/End: Original strand, 31061357 - 31061479
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||||||| |||||||||| ||||||| ||||||| ||| ||||||| | ||||||  ||||||||||||| || || | | |||| ||| |||||||     
T  31061357 taagggtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaattacgaacaatgtaaaatgtgtttttaaaataa 31061456  T
Q  493 attaagtgtgattgaagtattat 515  Q
    |||||||||  ||||| ||||||    
T  31061457 attaagtgtttttgaaatattat 31061479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 446 - 515
Target Start/End: Complemental strand, 37740085 - 37740015
Alignment:
Q  446 ttttcgtttttaaattacggactatatgacatgttttt-ctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||| |||||||||| | || ||||| |||||||||| |||||||| |||||||||||||||||||||||    
T  37740085 ttttcttttttaaattccagattatataacatgttttttctaaaataaattaagtgtgattgaagtattat 37740015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 501
Target Start/End: Complemental strand, 42296547 - 42296441
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| ||||||||||||| |||| ||||||||||||| ||||||| ||||||  ||||||||||||| || || | | || ||||| ||||||  ||    
T  42296547 agggtgtgtttggattgagggattaggaggggaagggaggagagggttcacttttattttttaaattacgaacgatgtaaaatatttttttaaaatgaat 42296448  T
Q  495 taagtgt 501  Q
    |||||||    
T  42296447 taagtgt 42296441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 489
Target Start/End: Original strand, 31795766 - 31795863
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaa 489  Q
    ||||| |||| ||||||| |||||||||  ||| |||||||||| |||  ||||||||||||||||||||||||||  ||||| | |||||| |||||    
T  31795766 ctaagagtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaa 31795863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 515
Target Start/End: Original strand, 45257294 - 45257427
Alignment:
Q  383 aaaataaaatctaagggtgtatttggattgagggtttagaagggg-aagggagggagggtttacttttcgtttttaaattacggactatatgacatgttt 481  Q
    |||||||||  ||||||||| ||||||||||| |||||| ||||| |||| |||||||  | ||||||  ||| ||||||||| || || | | ||||||    
T  45257294 aaaataaaaattaagggtgtgtttggattgagagtttaggaggggaaaggaagggaggactcacttttattttataaattacgaacaatgtaaaatgttt 45257393  T
Q  482 ttctaaaatatattaagtgtgattgaagtattat 515  Q
    |  ||||||| |||||||||  ||||||||||||    
T  45257394 tcttaaaataaattaagtgtttttgaagtattat 45257427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 389 - 436
Target Start/End: Original strand, 17379839 - 17379886
Alignment:
Q  389 aaatctaagggtgtatttggattgagggtttagaaggggaagggaggg 436  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  17379839 aaatcttagggtgtgtttggattgagggtttaggaggggaagggaggg 17379886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 466
Target Start/End: Complemental strand, 45257551 - 45257480
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacgga 466  Q
    ||||||| ||||||| |||| ||||| | ||||||||||| || |||||||||||| |||||||||||||||    
T  45257551 agggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattacgga 45257480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 515
Target Start/End: Complemental strand, 6721820 - 6721746
Alignment:
Q  441 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||| ||||| ||||||||  ||||| |||||  ||||||||||||||||| || ||||||||||||| ||||||    
T  6721820 tttagttttcttttttaaaccacggaatatatagcatgtttttctaaaataaatcaagtgtgattgaaatattat 6721746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 515
Target Start/End: Original strand, 34187573 - 34187695
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||||||| ||||||||||| |||||| || |||||| | |||| |||| ||||||  ||||||||||||| || |  | | |||||||  |||||||     
T  34187573 taagggtgtgtttggattgagagtttaggagtggaaggaaggggaaggttcacttttaatttttaaattacgaacaacgtaagatgttttattaaaataa 34187672  T
Q  493 attaagtgtgattgaagtattat 515  Q
    |||||||||  ||||||||||||    
T  34187673 attaagtgtttttgaagtattat 34187695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 515
Target Start/End: Original strand, 7681299 - 7681368
Alignment:
Q  446 ttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||| ||||| ||||||||| ||||| | |  ||||| ||||||| |||||||||||||||||||||||    
T  7681299 ttttcattttttaattacggattatataatagttttttgtaaaataaattaagtgtgattgaagtattat 7681368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 514
Target Start/End: Complemental strand, 39354380 - 39354299
Alignment:
Q  433 agggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtatta 514  Q
    |||||| ||||||||||  ||||||||||||    ||||| |||||||| ||||||||| | | ||||||||||||||||||    
T  39354380 agggagagtttactttttttttttaaattacaagttatataacatgtttatctaaaataaagttagtgtgattgaagtatta 39354299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 489
Target Start/End: Complemental strand, 40022608 - 40022523
Alignment:
Q  405 ttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaa 489  Q
    |||||| |||||||||  ||| |||||||||| ||||||||| |||| |||||||||||| |||  ||||| |||||||| |||||    
T  40022608 ttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgtttttttaaaa 40022523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 435
Target Start/End: Original strand, 33265611 - 33265646
Alignment:
Q  400 tgtatttggattgagggtttagaaggggaagggagg 435  Q
    |||||||||||||||||||||| |||||||||||||    
T  33265611 tgtatttggattgagggtttaggaggggaagggagg 33265646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 467
Target Start/End: Original strand, 36046205 - 36046276
Alignment:
Q  397 gggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 467  Q
    |||||| ||||||| |||||||||| |||||||  ||||| || ||||| ||||| ||||||||||||||||    
T  36046205 gggtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacggac 36046276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 483
Target Start/End: Original strand, 36347539 - 36347629
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    ||||||||| |||||||  ||||||||| |||||||||| || ||| ||| ||||||| |||||| ||||||||   |||||||| |||||    
T  36347539 taagggtgtgtttggatgaagggtttaggaggggaagggaagagagagttcacttttcatttttatattacggatactatgacatattttt 36347629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 483
Target Start/End: Complemental strand, 1583282 - 1583233
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    ||||||||| ||||||| ||||||||||||||||  ||||| ||||||||    
T  1583282 gggagggttcacttttcatttttaaattacggacactatgaaatgttttt 1583233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 483
Target Start/End: Original strand, 15224733 - 15224782
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    ||||| ||||||||||| ||||||||||||||||  ||||| ||||||||    
T  15224733 gggagtgtttacttttcatttttaaattacggacactatgaaatgttttt 15224782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 456
Target Start/End: Complemental strand, 31061596 - 31061543
Alignment:
Q  404 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgttttt 456  Q
    |||||||||||||||||| ||||||| ||| |||||| |||||||||| |||||    
T  31061596 tttggattgagggtttaggaggggaatggaggggaggatttacttttctttttt 31061543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 466
Target Start/End: Complemental strand, 887335 - 887283
Alignment:
Q  415 ggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacgga 466  Q
    ||||||| |||||||||||||| || | ||||||||| |||||||||||||||    
T  887335 ggtttaggaggggaagggaggggagcgcttacttttcttttttaaattacgga 887283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 7681488 - 7681417
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacgga 466  Q
    ||||||| | ||||||| |||||||||   ||||||||| ||||||||||||||||  |||||||||| ||||    
T  7681488 taagggtttgtttggatcgagggtttaagcggggaaggg-gggagggtttactttttatttttaaattgcgga 7681417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 515
Target Start/End: Original strand, 9631566 - 9631680
Alignment:
Q  404 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttcta---aaatatattaagtg 500  Q
    |||||||||| |||||||||| | ||||||     |||||||||||| |||||||| ||  |||||||| |||||||||| |    ||||| || |||||    
T  9631566 tttggattgaaggtttagaagagaaagggaaaagaggtttacttttcttttttaaactatcgactatataacatgtttttttttttaaataaatcaagtg 9631665  T
Q  501 tgattgaagtattat 515  Q
    ||| |||||||||||    
T  9631666 tgaatgaagtattat 9631680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 479 - 515
Target Start/End: Original strand, 12751899 - 12751935
Alignment:
Q  479 tttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||||||  ||||||||||||||||||||||    
T  12751899 tttttctaaaataatttaagtgtgattgaagtattat 12751935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 463
Target Start/End: Complemental strand, 31928285 - 31928225
Alignment:
Q  404 tttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattac 463  Q
    ||||||| |||||||||| |||||||||| |||||||| | ||||||  ||||||||||||    
T  31928285 tttggatcgagggtttaggaggggaagggaagggagggctcacttttaatttttaaattac 31928225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 434 - 482
Target Start/End: Original strand, 39732768 - 39732816
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttt 482  Q
    ||||||||||||||||| ||||||||||||| ||  ||||| |||||||    
T  39732768 gggagggtttacttttcatttttaaattacgaacattatgaaatgtttt 39732816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 2e-41; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 39856111 - 39855989
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||     
T  39856111 taagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataa 39856012  T
Q  493 attaagtgtgattgaagtattat 515  Q
    ||||||||||| | |||||||||    
T  39856011 attaagtgtgacttaagtattat 39855989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 389 - 515
Target Start/End: Complemental strand, 1051749 - 1051622
Alignment:
Q  389 aaatctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaa 487  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||| |||| |||| ||||| ||||||||||||| ||||||| || |||||||||||    
T  1051749 aaatctaagggtgtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaattacgaactatataacctgtttttctaa 1051650  T
Q  488 aatatattaagtgtgattgaagtattat 515  Q
    |||| ||||||||||||||||| |||||    
T  1051649 aataaattaagtgtgattgaagcattat 1051622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 399 - 515
Target Start/End: Complemental strand, 33655349 - 33655232
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 497  Q
    |||| |||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| || |||||| |||||||||||||||||| |||||    
T  33655349 gtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaattatgggctatataacatgtttttctaaaataaattaa 33655250  T
Q  498 gtgtgattgaagtattat 515  Q
    ||||||||||||||||||    
T  33655249 gtgtgattgaagtattat 33655232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 394 - 505
Target Start/End: Complemental strand, 13771192 - 13771080
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||||||| ||| |||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||     
T  13771192 taagggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacggactatataacatgtttttttaaaataa 13771093  T
Q  493 attaagtgtgatt 505  Q
    |||||||||||||    
T  13771092 attaagtgtgatt 13771080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 396 - 515
Target Start/End: Original strand, 47390855 - 47390975
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| ||||||||||||| |||| |||||||||||| |||||||||||||||| ||||||||||| | ||||||| |||||||||||||||||| ||    
T  47390855 agggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacat 47390954  T
Q  495 taagtgtgattgaagtattat 515  Q
    ||| |||||||||||||||||    
T  47390955 taattgtgattgaagtattat 47390975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 425 - 515
Target Start/End: Complemental strand, 41497172 - 41497081
Alignment:
Q  425 gggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  41497172 gggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattat 41497081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 34228563 - 34228442
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacgga-ctatatgacatgtttttctaaaatata 493  Q
    ||||||| |||| ||||| ||||||| ||| |||||||||| ||| |||||||||| |||| |||||||||| |||||| |||||||||||||||||| |    
T  34228563 agggtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacggaactatataacatgtttttctaaaataaa 34228464  T
Q  494 ttaagtgtgattgaagtattat 515  Q
    ||||||||||||||||||||||    
T  34228463 ttaagtgtgattgaagtattat 34228442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 396 - 515
Target Start/End: Original strand, 25887192 - 25887312
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||||||||||  |||||||||||||| ||| |||  ||||| ||| ||||| ||||||||||| |||||||||||||||||| ||    
T  25887192 agggtgtgtttggattgagggtttatgaggggaagggaggggaggatttgtttttcttttataaatcacggactatataacatgtttttctaaaataaat 25887291  T
Q  495 taagtgtgattgaagtattat 515  Q
    |||||||||||| ||||||||    
T  25887292 taagtgtgattggagtattat 25887312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 392 - 515
Target Start/End: Complemental strand, 40196769 - 40196656
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    |||||||||||||||||||||||||||| | ||||||          ||||||||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  40196769 tctaagggtgtatttggattgagggtttgggagggga----------ggtttactttttgtttttaaattacggaatatataacatgtttttctaaaata 40196680  T
Q  492 tattaagtgtgattgaagtattat 515  Q
     |||||||||||||||||||||||    
T  40196679 aattaagtgtgattgaagtattat 40196656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 397 - 515
Target Start/End: Complemental strand, 31571713 - 31571592
Alignment:
Q  397 gggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatg--tttttctaaaatata 493  Q
    |||||| |||||||||||||||||| |||||||| ||||| || ||||||||||| |||||||||||||||| |||| |||||  |||||  |||| |||    
T  31571713 gggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacggaccatataacatgctttttttaaaaaaata 31571614  T
Q  494 ttaagtgtgattgaagtattat 515  Q
    ||||||||||||||||||||||    
T  31571613 ttaagtgtgattgaagtattat 31571592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 434 - 515
Target Start/End: Original strand, 43230275 - 43230356
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||| |||||||| |||||||| |||||    
T  43230275 gggagggtttacttttcttttttaaattacggattatataacatgtttttctaaaataaattaagtgcgattgaagaattat 43230356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 392 - 515
Target Start/End: Original strand, 37925837 - 37925961
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 490  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||||||| ||||||  ||||||||||||| || || | | |||||||| | ||||    
T  37925837 tctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgttttttttaaat 37925936  T
Q  491 atattaagtgtgattgaagtattat 515  Q
    | |||||||||  ||||||||||||    
T  37925937 agattaagtgtttttgaagtattat 37925961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 398 - 515
Target Start/End: Complemental strand, 24970407 - 24970289
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaagggagggagg-gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 496  Q
    ||||| |||||||||||||||||| ||||    ||||||| | ||||  ||||| ||||||||||| ||| ||||| |||||||||||||||||| ||||    
T  24970407 ggtgtgtttggattgagggtttaggagggtttaggagggaagagtttgtttttcttttttaaattatggattatataacatgtttttctaaaataaatta 24970308  T
Q  497 agtgtgattgaagtattat 515  Q
    |||||||||||||||||||    
T  24970307 agtgtgattgaagtattat 24970289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 404 - 515
Target Start/End: Complemental strand, 34235239 - 34235131
Alignment:
Q  404 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatatattaagtgtg 502  Q
    |||||||||||||||||| ||| ||  |||||  | ||||||||||| ||||||||||||||| ||||| ||||| ||||||||||||| ||||||||||    
T  34235239 tttggattgagggtttaggaggaga--ggagg--gtgtttacttttcatttttaaattacggattatataacatgttttttctaaaataaattaagtgtg 34235144  T
Q  503 attgaagtattat 515  Q
    |||||||||||||    
T  34235143 attgaagtattat 34235131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 434 - 515
Target Start/End: Original strand, 17852910 - 17852991
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||| ||||||||| ||||||||||||||| || || |||||||||||||||||| ||||||||||||||| |||||||    
T  17852910 gggagggattacttttcttttttaaattacggattaaataacatgtttttctaaaataaattaagtgtgattgaggtattat 17852991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 392 - 515
Target Start/End: Complemental strand, 37417871 - 37417757
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    ||||||||||| |||||||||||||||||| |||||| ||         |||||||||| ||||||||| ||||||||||| ||||||||||| ||| ||    
T  37417871 tctaagggtgtgtttggattgagggtttaggaggggatgg---------tttacttttcatttttaaataacggactatataacatgtttttcaaaatta 37417781  T
Q  492 tattaagtgtgattgaagtattat 515  Q
      ||||||||||||||||||||||    
T  37417780 agttaagtgtgattgaagtattat 37417757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 399 - 515
Target Start/End: Original strand, 26365770 - 26365888
Alignment:
Q  399 gtgtatttggattgagggtttagaagggg-aagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 496  Q
    |||| |||||||||||||||||| ||||| |||||||  ||| ||||||||||| |||||| |||||  ||||||| |||| ||||||||||||| | ||    
T  26365770 gtgtgtttggattgagggtttaggagggggaagggagttgagagtttacttttcttttttatattacaaactatataacatatttttctaaaataaacta 26365869  T
Q  497 agtgtgattgaagtattat 515  Q
     ||||||||||||||||||    
T  26365870 ggtgtgattgaagtattat 26365888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 404 - 510
Target Start/End: Original strand, 41008190 - 41008298
Alignment:
Q  404 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatatattaagtgt 501  Q
    ||||||||||||||||   |||||||||||||| ||  |||  ||||| ||||||||||||||||||||| ||||| ||||| ||||||| |||||||||    
T  41008190 tttggattgagggtttgagaggggaagggaggggagaatttgtttttcttttttaaattacggactatataacatgttttttttaaaataaattaagtgt 41008289  T
Q  502 gattgaagt 510  Q
    |||||||||    
T  41008290 gattgaagt 41008298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 394 - 482
Target Start/End: Original strand, 4833529 - 4833618
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttt 482  Q
    ||||||| | ||||||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||| |||  ||||| |||||||    
T  4833529 taagggtatgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacagacactatgaaatgtttt 4833618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 393 - 515
Target Start/End: Original strand, 33519045 - 33519168
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    ||||||| || ||||||| |||| ||||| |||||||||||||| |||| | ||||||  ||||||||||||| || |||| | |||||||| | |||||    
T  33519045 ctaagggagtgtttggatggaggttttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatataaaatgtttttttgaaata 33519144  T
Q  492 tattaagtgtgattgaagtattat 515  Q
     |||||||||  ||||||||||||    
T  33519145 aattaagtgtttttgaagtattat 33519168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 437 - 515
Target Start/End: Original strand, 42306376 - 42306454
Alignment:
Q  437 agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||  ||||| |||||||||||| |||||||| |||||| ||||||||||| |||||| ||||||| ||||||||    
T  42306376 agggtttgattttcttttttaaattaccgactatataacatgtatttctaaaataaattaagcgtgattggagtattat 42306454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 392 - 463
Target Start/End: Complemental strand, 18231834 - 18231762
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattac 463  Q
    ||||||||||| ||||||| ||| |||||| ||||||||||| |||||| |||||||||| ||||||||||||    
T  18231834 tctaagggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattac 18231762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 467
Target Start/End: Original strand, 40196532 - 40196604
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||| ||||||| |||||||| | |||||||||||| |||||||||||||||| ||||| ||||||||||    
T  40196532 agggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggac 40196604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 483
Target Start/End: Original strand, 41496957 - 41497045
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    ||||||| ||||||| |||||||||| ||||||||||| |||| | |||||||||  |||||||||||||||| ||| || ||||||||    
T  41496957 agggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaataggaaatgttttt 41497045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 467
Target Start/End: Original strand, 48881558 - 48881630
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||| ||||||| |||||||||| ||||||||||| |||| || ||||||||| ||||||||||||||||    
T  48881558 agggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggac 48881630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 491
Target Start/End: Complemental strand, 23029537 - 23029482
Alignment:
Q  436 gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    ||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||    
T  23029537 gagggtttacttttcttttttaaattatagactatataacatgtttttctaaaata 23029482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 466
Target Start/End: Original strand, 36267553 - 36267624
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacgga 466  Q
    ||||||| ||||||| |||||||||| ||||||||||| ||||||| ||| ||||| |||||||||||||||    
T  36267553 agggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacgga 36267624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 399 - 513
Target Start/End: Complemental strand, 18795835 - 18795721
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaag 498  Q
    |||| ||||||||||| ||||||||||||||||  |||| || ||  ||||| ||||||||||||| || |||| | |||||||| ||||| | || |||    
T  18795835 gtgtgtttggattgagagtttagaaggggaaggaggggaaggcttgattttcttttttaaattacgaacaatataaaatgtttttttaaaacaaatcaag 18795736  T
Q  499 tgtgattgaagtatt 513  Q
    ||| |||||| ||||    
T  18795735 tgttattgaattatt 18795721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 394 - 463
Target Start/End: Original strand, 30592251 - 30592321
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattac 463  Q
    ||||||||||||||||| |||| ||||| |||| ||||| |||||||| ||||||||| ||||||||||||    
T  30592251 taagggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattac 30592321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 514
Target Start/End: Original strand, 48151996 - 48152099
Alignment:
Q  408 gattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattg 506  Q
    ||||||||||||||||| ||||  || | ||  |||||| |||| ||||||||||||||    ||| |||||||||||||||||| ||| ||||||||||    
T  48151996 gattgagggtttagaagaggaaatgaagagaatgtttacctttcttttttaaattacgg----tataacatgtttttctaaaataaatttagtgtgattg 48152091  T
Q  507 aagtatta 514  Q
    ||||||||    
T  48152092 aagtatta 48152099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 515
Target Start/End: Complemental strand, 40572475 - 40572358
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 497  Q
    ||||| |||||||||||||||||  ||||||| | | | |  ||||  ||||  |||| |||||||||||||||| | |||||| ||||||||| |||||    
T  40572475 ggtgtgtttggattgagggtttaagaggggaaagaaagaaaagtttgtttttatttttaaaattacggactatataatatgtttctctaaaataaattaa 40572376  T
Q  498 gtgtgattgaagtattat 515  Q
    | |||||| |||||||||    
T  40572375 gcgtgattaaagtattat 40572358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 399 - 483
Target Start/End: Complemental strand, 42306571 - 42306486
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    |||| |||||||||||||||||| |||||||  ||||| | |||||| ||||| ||||||||||||||||  ||||| ||||||||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacggacactatgaaatgttttt 42306486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 467
Target Start/End: Original strand, 13770948 - 13771020
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||| |||||||||||| ||||| ||||||||||| |||||| ||||||| |  ||||||||||||||||    
T  13770948 agggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggac 13771020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 463
Target Start/End: Complemental strand, 33519292 - 33519224
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattac 463  Q
    ||||||| ||||||| |||||||||| ||||||||||| ||||||| ||||||||| | ||||||||||    
T  33519292 agggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattac 33519224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 36267797 - 36267677
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||| | | ||||  ||||||||||||   | || | | ||||||||  ||||||||     
T  36267797 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcatttttattttttaaattacaaccaatgtaaaatgttttttcaaaatatag 36267698  T
Q  495 taagtgtgattgaagtattat 515  Q
    |||||||  ||||||||||||    
T  36267697 taagtgtttttgaagtattat 36267677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 515
Target Start/End: Complemental strand, 22163272 - 22163233
Alignment:
Q  476 atgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  22163272 atgtttttctaaaataaattaagtgtgattgaagtattat 22163233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 515
Target Start/End: Complemental strand, 22221980 - 22221941
Alignment:
Q  476 atgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  22221980 atgtttttctaaaataaattaagtgtgattgaagtattat 22221941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 467
Target Start/End: Original strand, 28074100 - 28074175
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 467  Q
    |||||||||| |||||||||| ||||||| |||||||||||||| ||   | ||||||| ||||||||||||||||    
T  28074100 ctaagggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacggac 28074175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 40282205 - 40282263
Alignment:
Q  404 tttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaatt 461  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||| ||||||||||    
T  40282205 tttggattgagggtttaggaggggaagggagaggagggtttgattttcttttttaaatt 40282263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 483
Target Start/End: Original strand, 45940658 - 45940744
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    ||||| ||||||| || |||||||||||||||||||||| |  ||||||||||  |||||| |||||||||  ||||| ||||||||    
T  45940658 ggtgtgtttggatggaaggtttagaaggggaagggagggcaaagtttactttttatttttatattacggacactatgaaatgttttt 45940744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 467
Target Start/End: Complemental strand, 47391102 - 47391028
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||||| ||||||| |||||||||  ||||||||||| ||||| ||||  ||||| ||||||||||||||||    
T  47391102 taagggtgtgtttggatggagggtttaagaggggaagggaggggagagtttggttttcatttttaaattacggac 47391028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 434 - 491
Target Start/End: Original strand, 10315652 - 10315709
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    |||||| |||||||||| |||||||||| | |||||||| |||| |||||||||||||    
T  10315652 gggaggatttacttttcttttttaaatttcagactatataacatatttttctaaaata 10315709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 31364285 - 31364237
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaagggagggagggtttacttt 448  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  31364285 gtgtgtttggattgagggtttaggaggggaaggga-ggagggtttacttt 31364237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 483
Target Start/End: Original strand, 33655148 - 33655196
Alignment:
Q  435 ggagggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    |||||||||||||||| ||||||||||||||||  ||||| ||||||||    
T  33655148 ggagggtttacttttcatttttaaattacggacactatgaaatgttttt 33655196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 45940835 - 45940780
Alignment:
Q  460 ttacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||| |||||||| |||| ||||||||||||| ||||| ||| |||||||||||||    
T  45940835 ttacagactatataacatatttttctaaaataaattaaatgtaattgaagtattat 45940780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 468
Target Start/End: Complemental strand, 48015453 - 48015378
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggact 468  Q
    ||||||| | ||||||| ||||| |||| ||||||||||||  ||| | |||||||||||||||||||||| ||||    
T  48015453 taagggtttgtttggatggagggattaggaggggaagggagatgagagcttacttttcgtttttaaattacagact 48015378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 467
Target Start/End: Complemental strand, 35422198 - 35422136
Alignment:
Q  406 tggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggac 467  Q
    |||||||||||||||| |||| ||  ||| |||||||||||||||| |||| |||||||||||    
T  35422198 tggattgagggtttaggagggaaatagagtggagggtttacttttctttttaaaattacggac 35422136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 515
Target Start/End: Original strand, 37620776 - 37620894
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 496  Q
    ||||| |||||||||||||||| | ||||||||||| ||||| ||| ||||||  |||| |||||| | || || | | ||| |||| ||||||| ||||    
T  37620776 ggtgtgtttggattgagggtttgggaggggaagggaggggagagttcactttttattttcaaattatgaacaatgtaaaatgattttttaaaataaatta 37620875  T
Q  497 agtgtgattgaagtattat 515  Q
    | |||  ||||||||||||    
T  37620876 aatgtttttgaagtattat 37620894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 466
Target Start/End: Original strand, 4835477 - 4835550
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacgga 466  Q
    ||||||||| ||| |||||||||||||| || | |||||| ||| | | ||||||||| |||||||||||||||    
T  4835477 taagggtgtgtttagattgagggtttaggagagaaagggaggggtgtgcttacttttcttttttaaattacgga 4835550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 464
Target Start/End: Complemental strand, 25887444 - 25887368
Alignment:
Q  388 aaaatctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 464  Q
    |||| |||||||||| ||||| |  ||||||||| ||||||||||| ||||| |||||| |||| |||||||||||||    
T  25887444 aaaaactaagggtgtgtttgg-tgaagggtttaggaggggaagggaggggagagtttacatttcatttttaaattacg 25887368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 431
Target Start/End: Complemental strand, 48881795 - 48881758
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagg 431  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  48881795 taagggtgtgtttggattgagggtttaggaggggaagg 48881758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 479 - 515
Target Start/End: Complemental strand, 18063721 - 18063685
Alignment:
Q  479 tttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  18063721 tttttttaaaataaattaagtgtgattgaagtattat 18063685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 2e-41; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 394 - 513
Target Start/End: Original strand, 54935065 - 54935186
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggg--agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    ||||||||| |||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||    
T  54935065 taagggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacgaactatataacatgtttttctaaaata 54935164  T
Q  492 tattaagtgtgattgaagtatt 513  Q
     |||||||||||||||||||||    
T  54935165 aattaagtgtgattgaagtatt 54935186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 393 - 515
Target Start/End: Complemental strand, 31348568 - 31348445
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    |||||||||| ||||||||||| |||||| |||||||||||||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  31348568 ctaagggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaata 31348469  T
Q  492 tattaagtgtgattgaagtattat 515  Q
     |||| ||||||||||| ||||||    
T  31348468 aattatgtgtgattgaattattat 31348445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 394 - 515
Target Start/End: Original strand, 54320433 - 54320554
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 493  Q
    ||||||||| |||||||||||||||||| |||| ||||||||||||||||  ||||| |||||||||||| ||||||||  ||||||||||||||||| |    
T  54320433 taagggtgtgtttggattgagggtttaggagggaaagggagggagggtttgattttcttttttaaattaccgactatatatcatgtttttctaaaataaa 54320532  T
Q  494 ttaagtgtgattgaagtattat 515  Q
    ||||||||||||| ||||||||    
T  54320533 ttaagtgtgattggagtattat 54320554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 1968605 - 1968483
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagggagg-gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| | ||||| ||||| ||||||||||||||||||||| | ||||||||||||||||     
T  1968605 taagggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacggactatataatatgtttttctaaaataa 1968506  T
Q  493 attaagtgtgattgaagtattat 515  Q
    || | ||||||||||||||||||    
T  1968505 atcaggtgtgattgaagtattat 1968483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 404 - 515
Target Start/End: Original strand, 27735753 - 27735865
Alignment:
Q  404 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 502  Q
    ||||||| |||||||||| ||||||||||| | ||||||||| ||||| ||||||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  27735753 tttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacggactatataacatgtttttttaaaataaattaagtgtg 27735852  T
Q  503 attgaagtattat 515  Q
    |||||||||||||    
T  27735853 attgaagtattat 27735865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 394 - 515
Target Start/End: Original strand, 37711136 - 37711263
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga------gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaa 487  Q
    ||||||||| |||||||||||||||||| |||||||||||      ||||||||||  ||||| ||||||||||||||||||||| |||||||| |||||    
T  37711136 taagggtgtgtttggattgagggtttaggaggggaagggaagggaggggagggtttgtttttcttttttaaattacggactatataacatgtttctctaa 37711235  T
Q  488 aatatattaagtgtgattgaagtattat 515  Q
    |||| |||||||||||||||||||||||    
T  37711236 aataaattaagtgtgattgaagtattat 37711263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 399 - 515
Target Start/End: Complemental strand, 46007942 - 46007825
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 497  Q
    |||| |||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||| | |||||||| || ||||||| ||||||| |||||    
T  46007942 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattgcagactatataacttgtttttgtaaaataaattaa 46007843  T
Q  498 gtgtgattgaagtattat 515  Q
    ||| ||||||||||||||    
T  46007842 gtgagattgaagtattat 46007825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 47433953 - 47433832
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactata-tgacatgtttttctaaaatata 493  Q
    ||||||| ||||| |||| ||||||| |||||||||||| |||||||||||||||| |||||||||||| ||||||| | |||||||||| ||||||| |    
T  47433953 agggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattacagactataataacatgtttttttaaaataaa 47433854  T
Q  494 ttaagtgtgattgaagtattat 515  Q
    ||||||||||||||||||||||    
T  47433853 ttaagtgtgattgaagtattat 47433832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 396 - 515
Target Start/End: Original strand, 26166937 - 26167057
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||||||||||| ||||||| |||||| || ||||  ||||| |||||||||||| |||||||| |||||||| ||||||||| ||    
T  26166937 agggtgtgtttggattgagggtttaggaggggaatggaggggagagtttgtttttcttttttaaattacagactatataacatgtttctctaaaataaat 26167036  T
Q  495 taagtgtgattgaagtattat 515  Q
    |||||||||||||||||||||    
T  26167037 taagtgtgattgaagtattat 26167057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 396 - 515
Target Start/End: Original strand, 45741890 - 45742010
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||||||||||| ||||||| | | | |||| |||||||||  ||||||||||||||||||||| || ||||||||||||||| ||    
T  45741890 agggtgtgtttggattgagggtttaggaggggaatgaatgtgaggatttacttttgttttttaaattacggactatataacttgtttttctaaaataaat 45741989  T
Q  495 taagtgtgattgaagtattat 515  Q
    ||| |||||||||||||||||    
T  45741990 taaatgtgattgaagtattat 45742010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 412 - 515
Target Start/End: Complemental strand, 49735695 - 49735592
Alignment:
Q  412 gagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagta 511  Q
    |||||||||| ||||||||||||||  |||||| ||||| |||||||| |||||||||||| |||||||||||||||||| || ||||||||| ||| ||    
T  49735695 gagggtttaggaggggaagggaggggaggtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaagtgtgatagaaata 49735596  T
Q  512 ttat 515  Q
    ||||    
T  49735595 ttat 49735592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 447 - 515
Target Start/End: Original strand, 35248738 - 35248806
Alignment:
Q  447 tttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  35248738 tttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattat 35248806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 5731077 - 5730954
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttc-gtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    |||| |||| |||| ||||||||||||| ||||||||||| ||||| ||||  ||| |  ||||||||||||||||||||| |||||||| |||||||||    
T  5731077 taagagtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttttttaaattacggactatataacatgtttctctaaaata 5730978  T
Q  492 tattaagtgtgattgaagtattat 515  Q
     ||||||||| |||||||||||||    
T  5730977 aattaagtgtaattgaagtattat 5730954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 409 - 515
Target Start/End: Original strand, 6891373 - 6891480
Alignment:
Q  409 attgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattga 507  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||| |||||||| |||  | ||||| |||||||||||||||||| |||||||||||||||    
T  6891373 attgagggtttagaaggggaagagaggggatagtttatttttcttttttaaaatacaaattatataacatgtttttctaaaataaattaagtgtgattga 6891472  T
Q  508 agtattat 515  Q
    ||||||||    
T  6891473 agtattat 6891480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 397 - 515
Target Start/End: Original strand, 36151577 - 36151696
Alignment:
Q  397 gggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatt 495  Q
    ||||||||||| ||||||||||| | |||||||| || | |||||||||  | |  ||| |||||||| |||||||| |||||||||||||||||| |||    
T  36151577 gggtgtatttgaattgagggttttggaggggaagagatgagagggtttatgtatattttataaattacagactatataacatgtttttctaaaataaatt 36151676  T
Q  496 aagtgtgattgaagtattat 515  Q
    ||||||||||||||||||||    
T  36151677 aagtgtgattgaagtattat 36151696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 393 - 515
Target Start/End: Original strand, 56135746 - 56135869
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||| | ||||  ||||||||||||| || || | | |||||||| |||||||    
T  56135746 ctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaata 56135845  T
Q  492 tattaagtgtgattgaagtattat 515  Q
     |||||||||  ||||||||||||    
T  56135846 aattaagtgtttttgaagtattat 56135869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 393 - 467
Target Start/End: Original strand, 49735465 - 49735540
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  49735465 ctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggac 49735540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 398 - 515
Target Start/End: Complemental strand, 2248043 - 2247927
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 496  Q
    ||||| |||||||||||||||||| ||| |||| || ||||| ||||||||||| |||||||||||| || ||||| |||||||||||||||| | | ||    
T  2248043 ggtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattacaga-tatataacatgtttttctaaaa-aaaata 2247946  T
Q  497 agtgtgattgaagtattat 515  Q
     ||||||||||||||||||    
T  2247945 tgtgtgattgaagtattat 2247927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 394 - 515
Target Start/End: Original strand, 29798286 - 29798404
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||||||| |||||||||| ||||||| |||||||| ||| |||  ||||||||||  |||||||||||| |||||||| |||||||||||| ||||      
T  29798286 taagggtgtgtttggattgatggtttaggaggggaagagagaggatagtttacttttattttttaaattacagactatataacatgtttttcttaaatc- 29798384  T
Q  493 attaagtgtgattgaagtattat 515  Q
       ||||||||||||||||||||    
T  29798385 ---aagtgtgattgaagtattat 29798404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 45132739 - 45132625
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||| |||||| |||||| |||||||| |||| || |||||||||||| ||||||||||||||||||||| | |||      ||||||| ||    
T  45132739 agggtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacggactatataatatg------taaaataaat 45132646  T
Q  495 taagtgtgattgaagtattat 515  Q
    |||||||||||||||||||||    
T  45132645 taagtgtgattgaagtattat 45132625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 393 - 515
Target Start/End: Complemental strand, 17938355 - 17938231
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttcta-aaat 490  Q
    |||||||| | |||||||||||  ||||| ||||||||||||  ||| ||||||||||| ||||||||||||  ||||||| |||| ||||| |  ||||    
T  17938355 ctaagggtatgtttggattgagaatttaggaggggaagggagatgagagtttacttttcttttttaaattacaaactatataacatatttttttttaaat 17938256  T
Q  491 atattaagtgtgattgaagtattat 515  Q
    | |||||||||||||||||||||||    
T  17938255 aaattaagtgtgattgaagtattat 17938231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 54935313 - 54935241
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||| ||||||| |||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  54935313 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggac 54935241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 405 - 515
Target Start/End: Original strand, 16400809 - 16400920
Alignment:
Q  405 ttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtga 503  Q
    ||||||||||||||||| ||| |||||||||| ||| || ||||||  |||||| | |||  ||||||  |||||||||||||||||| ||||| | |||    
T  16400809 ttggattgagggtttaggaggagaagggaggggaggattcacttttattttttatactacaaactatacaacatgtttttctaaaataaattaattatga 16400908  T
Q  504 ttgaagtattat 515  Q
    ||||||||||||    
T  16400909 ttgaagtattat 16400920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 393 - 467
Target Start/End: Original strand, 54576324 - 54576399
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    |||| ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||| |||||| |||||||||    
T  54576324 ctaaaggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacggac 54576399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 21695134 - 21695013
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||||||| ||||||||| |||||||  ||||||||| || ||||||||||||||||  |||||||||| |||| |||| |  | ||||| |  ||||     
T  21695134 taagggtgtgtttggattgggggtttatgaggggaaggaagcggagggtttacttttctattttaaattatggacaatataatttattttt-tttaataa 21695036  T
Q  493 attaagtgtgattgaagtattat 515  Q
    |||||||||||||||||||||||    
T  21695035 attaagtgtgattgaagtattat 21695013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 515
Target Start/End: Original strand, 28332850 - 28332924
Alignment:
Q  441 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||| ||||||||||||  ||||||| ||| ||||||||||| || ||||||| |||||||||||||||    
T  28332850 tttacttttcttttttaaattacatactatataacaggtttttctaaagtaaattaagtatgattgaagtattat 28332924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 515
Target Start/End: Original strand, 44784038 - 44784112
Alignment:
Q  441 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||| ||||||||||||  || |||| ||| ||||||||||| || |||||||||||||||||||||||    
T  44784038 tttacttttcttttttaaattacataccatataacaggtttttctaaagtaaattaagtgtgattgaagtattat 44784112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 412 - 515
Target Start/End: Complemental strand, 24565572 - 24565470
Alignment:
Q  412 gagggtttagaaggggaagggagggaggg-tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagt 510  Q
    |||||||||| ||||||||||||||| |  ||||| |||| |||||||||||||| |||||| ||||||||||||| |  ||| | || |||||||||||    
T  24565572 gagggtttaggaggggaagggagggaagaatttacatttcttttttaaattacgggctatataacatgtttttctata--ataatgagcgtgattgaagt 24565475  T
Q  511 attat 515  Q
    |||||    
T  24565474 attat 24565470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 451 - 515
Target Start/End: Complemental strand, 2917151 - 2917087
Alignment:
Q  451 gtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||| |||||||||| ||||| |||||||||||| ||| | |||||||||||||||||    
T  2917151 gtttttaaattccggactatataacatgattttctaaaataaatttattgtgattgaagtattat 2917087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 515
Target Start/End: Original strand, 22186719 - 22186839
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    |||||||||||||||||||||||||| | |||||||||||| || ||| ||||||  ||||||||||||  || |  | | |||||||| ||||||| ||    
T  22186719 agggtgtatttggattgagggtttaggaagggaagggagggcagagttcacttttaatttttaaattacaaacaacgtaaaatgtttttttaaaataaat 22186818  T
Q  495 taagtgtgattgaagtattat 515  Q
     ||||||  ||||||||||||    
T  22186819 aaagtgtttttgaagtattat 22186839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 37711367 - 37711295
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||| ||||||| |||||||||| ||||||||||| |||||||||||  |||| ||||||||||||||||    
T  37711367 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggac 37711295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 392 - 483
Target Start/End: Complemental strand, 45742138 - 45742046
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    ||||||||||| |||||||  |||||||||  ||| ||||||||| || ||||||||||| ||||||||||||||||  ||||| ||||||||    
T  45742138 tctaagggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacggacactatgaaatgttttt 45742046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 54320678 - 54320606
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||||||  ||||  ||||||||||||||||    
T  54320678 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacggac 54320606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 472
Target Start/End: Original strand, 6938289 - 6938358
Alignment:
Q  404 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatat 472  Q
    |||||||||| | ||||| ||||||||||||| |||| |||| ||||| |||||||||||||||||||||    
T  6938289 tttggattgatgatttaggaggggaagggaggagaggatttatttttcctttttaaattacggactatat 6938358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 515
Target Start/End: Original strand, 22920981 - 22921102
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||| ||||||| |||| ||  ||| ||||  ||||| |||| ||||||||||||  |||| || ||||||||||||| |||| ||    
T  22920981 agggtgtgtttggattgatggtttaggagggaaaaagagaggagaatttacgtttcttttttaaattacaaactacataacatgtttttctagaataaat 22921080  T
Q  495 -taagtgtgattgaagtattat 515  Q
      ||||||||||||||||||||    
T  22921081 caaagtgtgattgaagtattat 22921102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 22970818 - 22970697
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||| ||||||| |||| ||  ||| ||||  ||||| |||| ||||||||||||  |||| || ||||||||||||| |||| ||    
T  22970818 agggtgtgtttggattgatggtttaggagggaaaaagagaggagaatttacgtttcttttttaaattacaaactacataacatgtttttctagaataaat 22970719  T
Q  495 -taagtgtgattgaagtattat 515  Q
      ||||||||||||||||||||    
T  22970718 caaagtgtgattgaagtattat 22970697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 423 - 483
Target Start/End: Original strand, 31348348 - 31348409
Alignment:
Q  423 aggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||  ||||| ||||||||    
T  31348348 aggggaagggagggaagggtttacttttcatttttaaattacggacactatgaaatgttttt 31348409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 17182729 - 17182609
Alignment:
Q  396 agggtgtatttggattgagggttta-gaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| ||||||||||||||||| || ||| |||| |||||||  ||||||||  ||||||||||||| || |  | | || ||||| ||||||| ||    
T  17182729 agggtgtgtttggattgagggtttatgaggggaaaggaagggaggacttacttttattttttaaattacgaacaaggtaaaatatttttttaaaataaat 17182630  T
Q  495 taagtgtgattgaagtattat 515  Q
    |||||||  ||||||||||||    
T  17182629 taagtgtttttgaagtattat 17182609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 467
Target Start/End: Original strand, 21694906 - 21694962
Alignment:
Q  412 gagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  21694906 gagggtttaggaggggaagggacgggagggcttacttttcttttttaaattacggac 21694962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 515
Target Start/End: Original strand, 41174397 - 41174465
Alignment:
Q  447 tttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||| ||||||||||| |||||||||  ||||||||||||||||| || || ||||||||| |||||||    
T  41174397 tttcttttttaaattagggactatatagcatgtttttctaaaataaatcaaatgtgattgatgtattat 41174465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 452 - 515
Target Start/End: Original strand, 34995108 - 34995171
Alignment:
Q  452 tttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||| || || ||| |||||||||||||||| |||||||||  ||||||||||||    
T  34995108 tttttaaattacgaacaatgtgaaatgtttttctaaaataaattaagtgtttttgaagtattat 34995171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 515
Target Start/End: Complemental strand, 47846298 - 47846179
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatatatt 495  Q
    ||||| |||||||||||||||||  ||| ||||||| ||||||||||||||||  ||||||||||| | || || | |  || ||||| ||||||| |||    
T  47846298 ggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaattatgaacaatgtaaagtgttttttttaaaataaatt 47846199  T
Q  496 aagtgtgattgaagtattat 515  Q
    ||||||  ||||||||||||    
T  47846198 aagtgtttttgaagtattat 47846179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 467
Target Start/End: Complemental strand, 27735987 - 27735917
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggac 467  Q
    ||||| ||||||| |||||||||| |||||||||||||  |||||| | ||||| ||||||||||||||||    
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggac 27735917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 467
Target Start/End: Complemental strand, 41174591 - 41174517
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||||| ||||||| |||||||||| ||||||||||| |||| |||||| ||||| ||||||| ||| ||||    
T  41174591 taagggtgtgtttggatggagggtttaggaggggaagggaggggatggtttagttttcatttttaatttagggac 41174517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 6938493 - 6938420
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacgga 466  Q
    ||||||||| ||||||| || ||||||  ||||||| |||||| |||||| ||||||| |||||||||||||||    
T  6938493 taagggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacgga 6938420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 403 - 467
Target Start/End: Original strand, 17938114 - 17938179
Alignment:
Q  403 atttggattgagggtttagaaggggaagggagggagg-gtttacttttcgtttttaaattacggac 467  Q
    |||||||| |||||||||| ||||||| ||||||| | ||||| ||||||||||||||||| ||||    
T  17938114 atttggatggagggtttaggaggggaatggagggaagagtttaattttcgtttttaaattatggac 17938179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 444
Target Start/End: Complemental strand, 49735736 - 49735687
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggttta 444  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  49735736 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttta 49735687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 467
Target Start/End: Original strand, 5730830 - 5730902
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||| ||||||| |||||||||| |||| ||| || |||||||||||  |||| ||||||||||||||||    
T  5730830 agggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggac 5730902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 37761708 - 37761636
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||| ||||||| |||| |||| |||||||||||| ||||||| || |||||| ||||||||||| ||||    
T  37761708 agggtgtgtttggatggaggatttaaaaggggaagggaggggagggcttccttttcttttttaaattatggac 37761636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 450
Target Start/End: Original strand, 53260716 - 53260771
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttc 450  Q
    ||||||||| ||||||| |||||||||| |||||||||||||| ||||| |||||||    
T  53260716 taagggtgtgtttggatggagggtttaggaggggaagggaggg-gggttcacttttc 53260771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 464
Target Start/End: Complemental strand, 7977743 - 7977672
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 464  Q
    ||||||||| |||||||||||||||||  ||||||| ||| ||||||||| | ||||  |||||||||||||    
T  7977743 taagggtgtgtttggattgagggtttatgaggggaaaggaggggagggttcaattttattttttaaattacg 7977672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 468
Target Start/End: Complemental strand, 11089755 - 11089687
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggact 468  Q
    ||||||||| |||||||||||| |||||||||||||      || ||||||| |||| |||||||||||||||||    
T  11089755 taagggtgtgtttggattgaggatttagaaggggaa------gatggtttacatttcttttttaaattacggact 11089687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 450
Target Start/End: Original strand, 35565566 - 35565613
Alignment:
Q  404 tttggattgagggtttagaaggggaaggga-gggagggtttacttttc 450  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  35565566 tttggattgagggtttagcaggggaagggaggggagggcttacttttc 35565613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 24565343 - 24565417
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacgga 466  Q
    |||||||||| ||||||| || ||||||| | ||||||   ||| |||||||||||||| |||||||||||||||    
T  24565343 ctaagggtgtgtttggatggaaggtttaggaagggaagactggggagggtttacttttcatttttaaattacgga 24565417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 489
Target Start/End: Original strand, 36277781 - 36277819
Alignment:
Q  451 gtttttaaattacggactatatgacatgtttttctaaaa 489  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  36277781 gtttttaaattatggactatatggcatgtttttctaaaa 36277819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 515
Target Start/End: Original strand, 55510177 - 55510290
Alignment:
Q  404 tttggattgagggtttagaaggggaaggga--gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 501  Q
    ||||||||||||| ||||   ||||||||   ||||||  ||||||||| ||||||| |||  ||| || | | |||||||| ||||||| |||||||||    
T  55510177 tttggattgaggggttagggagggaaggggaggggaggacttacttttcatttttaatttaaagacaatgtaaaatgtttttttaaaataaattaagtgt 55510276  T
Q  502 gattgaagtattat 515  Q
    || |||||||||||    
T  55510277 gactgaagtattat 55510290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 467
Target Start/End: Complemental strand, 35248922 - 35248858
Alignment:
Q  404 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 467  Q
    ||||||| |||||||||| || || |||||||| ||||||||||||||  |||||||||| ||||    
T  35248922 tttggatggagggtttaggagaggtagggaggggagggtttacttttcaattttaaattatggac 35248858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 464
Target Start/End: Complemental strand, 44784206 - 44784166
Alignment:
Q  425 gggaagggagggagg-gtttacttttcgtttttaaattacg 464  Q
    ||||||||||||| | |||||||||||||||||||||||||    
T  44784206 gggaagggagggaagagtttacttttcgtttttaaattacg 44784166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 394 - 509
Target Start/End: Complemental strand, 39436 - 39320
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| | ||||||||||||||||||     
T  39436 taagggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacggactatgtaacatgtttttctaaaataa 39337  T
Q  493 attaagtgtgattgaag 509  Q
    |||||||||||||||||    
T  39336 attaagtgtgattgaag 39320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 483
Target Start/End: Original strand, 39186 - 39275
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg--agggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    ||||||| ||||||| |||||||||| |||||||  |||||  |||||||||||||| ||||||||||||||||  ||||| ||||||||    
T  39186 agggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacggacactatgaaatgttttt 39275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 392 - 515
Target Start/End: Complemental strand, 40095182 - 40095057
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaa 489  Q
    ||||||||||| ||||||||||||||||||||||  |||||| ||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||    
T  40095182 tctaagggtgtgtttggattgagggtttagaaggaaaagggaaggaagggtttacttttcgtttttaaattacagactatataacatgttttttctaaaa 40095083  T
Q  490 tatattaagtgtgattgaagtattat 515  Q
    || |||||||||||||||||||||||    
T  40095082 taaattaagtgtgattgaagtattat 40095057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 396 - 515
Target Start/End: Original strand, 30010332 - 30010452
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||| |||||||||| | ||||||||||||||||||| |||||||||||||||||| ||    
T  30010332 agggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacggactatataacatgtttttctaaaataaat 30010431  T
Q  495 taagtgtgattgaagtattat 515  Q
    |||||||| ||||||||||||    
T  30010432 taagtgtggttgaagtattat 30010452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 32951562 - 32951442
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| ||||||||||| |||||| || ||||||||||| || ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  32951562 agggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacggactatagaacatgtttttctaaaataaat 32951463  T
Q  495 taagtgtgattgaagtattat 515  Q
    |||||||||||||||||||||    
T  32951462 taagtgtgattgaagtattat 32951442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 404 - 515
Target Start/End: Complemental strand, 2859168 - 2859056
Alignment:
Q  404 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 502  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||  ||||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  2859168 tttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacggactatataacatgtttttcaaaaataaattaagtgtg 2859069  T
Q  503 attgaagtattat 515  Q
    |||||||||||||    
T  2859068 attgaagtattat 2859056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 394 - 512
Target Start/End: Original strand, 12234008 - 12234127
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||||||| |||||||||||||||||| |||||||||||||| |||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||||     
T  12234008 taagggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacggactatataacatgtttttctaaaataa 12234107  T
Q  493 attaagtgtgattgaagtat 512  Q
    || |||||||||||| ||||    
T  12234108 atcaagtgtgattgatgtat 12234127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 393 - 515
Target Start/End: Complemental strand, 38510141 - 38510018
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    ||||| |||| |||||||| ||||||||| |||||||||||||| |||||||| ||||| |||||||| |||||||||||| ||||||||||||||||||    
T  38510141 ctaagagtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacggactatataacatgtttttctaaaata 38510042  T
Q  492 tattaagtgtgattgaagtattat 515  Q
     || ||||||||||||||||||||    
T  38510041 aatcaagtgtgattgaagtattat 38510018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 394 - 515
Target Start/End: Original strand, 10391870 - 10391992
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    |||||||| ||||||||||||| ||||| |||||||  ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||     
T  10391870 taagggtgaatttggattgaggttttaggaggggaaacgaggggagggtttacttttcatttttaaattacggactatattacatgtttttctaaaataa 10391969  T
Q  493 attaagtgtgattgaagtattat 515  Q
    ||||| ||||||| |||||||||    
T  10391970 attaattgtgattaaagtattat 10391992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 35349706 - 35349586
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |     
T  35349706 agggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacggactatataacatttttttctaaaataaac 35349607  T
Q  495 taagtgtgattgaagtattat 515  Q
    |||| || |||||||||||||    
T  35349606 taagggttattgaagtattat 35349586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 394 - 515
Target Start/End: Original strand, 41498402 - 41498524
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| | ||||| | ||||| |||||||  |||     
T  41498402 taagggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaattatgaactatttaacatgattttctacgataa 41498501  T
Q  493 attaagtgtgattgaagtattat 515  Q
     ||||||||||||||||||||||    
T  41498502 gttaagtgtgattgaagtattat 41498524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 404 - 515
Target Start/End: Original strand, 51597676 - 51597788
Alignment:
Q  404 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 502  Q
    |||||||||||||||||  |  ||||||||||| || ||||||||||| ||||||||| ||||||||||| |||||||||| ||||||| ||||||||||    
T  51597676 tttggattgagggtttatgaaaggaagggaggggagagtttacttttcttttttaaatcacggactatataacatgtttttttaaaataaattaagtgtg 51597775  T
Q  503 attgaagtattat 515  Q
    |||||||||||||    
T  51597776 attgaagtattat 51597788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 434 - 515
Target Start/End: Original strand, 8529838 - 8529919
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||||||| ||||||||||||  ||||||| |||||||||| | ||||| |||||||||||||||||||||||    
T  8529838 gggagggtttacttttcttttttaaattacaaactatataacatgttttttttaaataaattaagtgtgattgaagtattat 8529919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 434 - 515
Target Start/End: Complemental strand, 50744486 - 50744405
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||  ||||| ||||||||||||||||||||| ||| |||| ||||||||| |||||||||||||||||||||||    
T  50744486 gggagggtttgtttttcttttttaaattacggactatataacaggtttctctaaaataaattaagtgtgattgaagtattat 50744405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 393 - 467
Target Start/End: Complemental strand, 30010579 - 30010504
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  30010579 ctaagggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacggac 30010504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 407 - 488
Target Start/End: Original strand, 7444489 - 7444571
Alignment:
Q  407 ggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaa 488  Q
    ||||||||||||| | ||| ||||||| ||||||||||||||||| |||||||||||||||| |||||||||| |||||||||    
T  7444489 ggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacggaccatatgacatgattttctaaa 7444571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 49946834 - 49946712
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||| ||| ||||||||||||| ||||  |||||||||| | ||||||||||||||| | ||||||  |  |||||||| |||||||||| |||||||     
T  49946834 taaggatgtgtttggattgagggattaggcggggaagggatgtgagggtttacttttcttgtttaaaccagagactatataacatgtttttttaaaataa 49946735  T
Q  493 attaagtgtgattgaagtattat 515  Q
    ||||| |||||||||||||||||    
T  49946734 attaaatgtgattgaagtattat 49946712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 482
Target Start/End: Original strand, 40094933 - 40095020
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttt 482  Q
    ||||||| ||||||| |||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||  ||||| |||||||    
T  40094933 agggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggacactatgaaatgtttt 40095020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 488
Target Start/End: Original strand, 26324013 - 26324112
Alignment:
Q  395 aagggtgtatttggattgagggtttagaaggggaaggga------gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaa 488  Q
    |||||||| |||||||||||||||||| |||||||||||      ||||||||||  ||||| ||||||||||||  ||||||| |||||||||||||||    
T  26324013 aagggtgtgtttggattgagggtttaggaggggaagggaggggaggggagggtttgattttcttttttaaattaccaactatataacatgtttttctaaa 26324112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 396 - 467
Target Start/End: Original strand, 38509894 - 38509966
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||| ||||||| |||||||||| |||||||||||| |||||||| ||||||| ||||||||||||||||    
T  38509894 agggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggac 38509966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 26941077 - 26940967
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatt 495  Q
    ||||||| |||||||||||||||||| |||||||||         || | ||||| |||||||| |||||| | ||| |||||||||||||||||| ||     
T  26941077 agggtgtgtttggattgagggtttaggaggggaagg---------ttcaattttcttttttaaaatacggattctataacatgtttttctaaaataaatc 26940987  T
Q  496 aagtgtgattgaagtattat 515  Q
    ||||||||||||||||||||    
T  26940986 aagtgtgattgaagtattat 26940967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 440 - 511
Target Start/End: Complemental strand, 45585884 - 45585813
Alignment:
Q  440 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagta 511  Q
    ||||||||||| | || |||||||||||||||| |||||||||| ||||||| |||||||||||| ||||||    
T  45585884 gtttacttttcctcttaaaattacggactatataacatgtttttttaaaataaattaagtgtgatcgaagta 45585813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 467
Target Start/End: Complemental strand, 12234252 - 12234182
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||| ||||||| |||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  12234252 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacggac 12234182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 515
Target Start/End: Complemental strand, 44211103 - 44211029
Alignment:
Q  441 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||| |||| ||| |||||||| | |||||| || ||||||||||||||| |||||||||||||||||||||||    
T  44211103 tttacatttcttttataaattacagtctatataacgtgtttttctaaaataaattaagtgtgattgaagtattat 44211029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 25268502 - 25268437
Alignment:
Q  402 tatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacgga 466  Q
    ||||||||| ||||||||||||||||||| || ||||||||||||||| | |||||||||||||||    
T  25268502 tatttggatggagggtttagaaggggaagtgaggggagggtttactttccttttttaaattacgga 25268437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 467
Target Start/End: Original strand, 35349464 - 35349536
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||||| ||||||| |||||||||  |||||| ||| ||||||||||||||||| ||||||||||||||||    
T  35349464 taagggtgtgtttggatggagggtttaagaggggagggg-gggagggtttacttttcatttttaaattacggac 35349536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 1085734 - 1085614
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| ||||||| |||||||||| ||||||||||||| || |  | ||||||  ||||||||||||| || || | | |||||||| ||||||| ||    
T  1085734 agggtgtgtttggatagagggtttaggaggggaagggaggagatgactcacttttattttttaaattacgaaccatgtaaaatgtttttttaaaataaat 1085635  T
Q  495 taagtgtgattgaagtattat 515  Q
    |||||||  ||||||||||||    
T  1085634 taagtgtttttgaagtattat 1085614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 463
Target Start/End: Complemental strand, 35928056 - 35927988
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaa-gggagggagggtttacttttcgtttttaaattac 463  Q
    ||||||| ||||||||||||| |||||||||||| |||||||| | |||||||||| ||||||||||||    
T  35928056 agggtgtgtttggattgagggcttagaaggggaaggggagggatgatttacttttcttttttaaattac 35927988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 515
Target Start/End: Original strand, 49832547 - 49832667
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    |||||| ||||||||| | ||||||| |||||||| ||| |||| | ||||||||| |||||||||||| ||  |||| |  |||||||  |||||| |     
T  49832547 agggtgcatttggattcaaggtttaggaggggaagtgagaggagagcttacttttcttttttaaattacagataatataaagtgttttttaaaaataaaa 49832646  T
Q  495 taagtgtgattgaagtattat 515  Q
    |||||||||||||||||||||    
T  49832647 taagtgtgattgaagtattat 49832667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 434 - 509
Target Start/End: Complemental strand, 2470940 - 2470865
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaag 509  Q
    |||| |||||||||||| |||||||||||   ||||||| |||||||||||||||||| | ||| |||||||||||    
T  2470940 gggaaggtttacttttcttttttaaattatcaactatataacatgtttttctaaaatacactaattgtgattgaag 2470865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 480
Target Start/End: Original strand, 2858932 - 2859017
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtt 480  Q
    ||||||| ||||||| |||||||||| |||| ||||||||| |||||||||||||| ||| |||||||| |||  ||||| |||||    
T  2858932 agggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattacagaccctatgaaatgtt 2859017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 515
Target Start/End: Original strand, 6563618 - 6563697
Alignment:
Q  435 ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||| ||||| ||||||||| || |||||||| |||||| ||||||||||| |||| |||| |||||| ||||||    
T  6563618 ggagggttta-ttttcttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattat 6563697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 482
Target Start/End: Complemental strand, 41498649 - 41498561
Alignment:
Q  396 agggtgtatttggattgagggtttagaagggg-aagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttt 482  Q
    ||||||| ||||||| ||| |||||| ||||| ||||||||| ||| |||||||||| ||||||||||||||||  ||||| |||||||    
T  41498649 agggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggacactatgaaatgtttt 41498561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 467
Target Start/End: Complemental strand, 47261519 - 47261443
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 467  Q
    ||||||||||| ||||||| | || |||||||||||||| ||||| |||||||| ||||| |||||||| |||||||    
T  47261519 tctaagggtgtgtttggatgggggatttagaaggggaagagagggtagggtttaattttcttttttaaagtacggac 47261443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 467
Target Start/End: Original strand, 20576136 - 20576205
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    |||| ||||||| |||||||||| ||||||||||| ||||| |||||  |||| ||||||||||||||||    
T  20576136 gtgtgtttggatagagggtttaggaggggaagggaggggagagtttagatttcatttttaaattacggac 20576205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 394 - 446
Target Start/End: Complemental strand, 20607463 - 20607410
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttact 446  Q
    ||||||||| ||||||| |||||||||| ||||||||||| |||||||||||||    
T  20607463 taagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttact 20607410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 474 - 515
Target Start/End: Complemental strand, 36285739 - 36285698
Alignment:
Q  474 acatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||| |||||||||| ||||||||||||||||||||    
T  36285739 acatgtttttttaaaatatatcaagtgtgattgaagtattat 36285698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 49189586 - 49189639
Alignment:
Q  88 tattgaagttgtattagattatcacattcccaatgttttcgagttgtgcaatgt 141  Q
    ||||||||||||||| || ||||||||| ||||||||  |||||||||||||||    
T  49189586 tattgaagttgtatttgagtatcacattgccaatgttcccgagttgtgcaatgt 49189639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 515
Target Start/End: Original strand, 33643268 - 33643388
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| ||| |||||| ||||||| ||||||||||| |||| |  | ||||||  ||||||||||||| |  || | | |||||||| ||||||| ||    
T  33643268 agggtgtgtttagattgaaggtttaggaggggaagggaagggatgactcacttttattttttaaattacgaaaaatgtaaaatgtttttttaaaataaat 33643367  T
Q  495 taagtgtgattgaagtattat 515  Q
    |||||||  ||||||||||||    
T  33643368 taagtgtttttgaagtattat 33643388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 467
Target Start/End: Complemental strand, 35513033 - 35512969
Alignment:
Q  404 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||| |||||||||| ||||||||||| ||||||| ||||||||  ||||||||||| ||||    
T  35513033 tttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaattatggac 35512969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 467
Target Start/End: Complemental strand, 8530046 - 8529971
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggac 467  Q
    |||||| ||| |||||||  || |||||| ||||||||||||| ||  ||||||||||| ||||||||||||||||    
T  8530046 ctaaggatgtgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggac 8529971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 436
Target Start/End: Original strand, 51303381 - 51303424
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggaggg 436  Q
    |||||||||| |||||||||||||||||| |||||| |||||||    
T  51303381 ctaagggtgtgtttggattgagggtttaggaggggaggggaggg 51303424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 525344 - 525223
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatata 493  Q
    ||||||| |||||||||||||||||| | |||||||| ||| || ||| ||||||  ||||||||||||  || |  | | ||| ||||| ||||||| |    
T  525344 agggtgtgtttggattgagggtttaggacgggaagggaaggaagagttcacttttaatttttaaattacaaacaacgtaaaatgttttttttaaaataaa 525245  T
Q  494 ttaagtgtgattgaagtattat 515  Q
    |||||| || ||||||||||||    
T  525244 ttaagtttgtttgaagtattat 525223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 467
Target Start/End: Original strand, 1085485 - 1085562
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttactttt-cgtttttaaattacggac 467  Q
    ||||||||||| ||||||| |||||||||| ||||| | ||| ||||||  |||||||| | ||||||||||||||||    
T  1085485 tctaagggtgtgtttggatggagggtttaggagggggatggaggggaggacttacttttccttttttaaattacggac 1085562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 467
Target Start/End: Complemental strand, 7444744 - 7444667
Alignment:
Q  391 atctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 467  Q
    ||||||| |||| |||||||  || |||||||| |||||| ||||| |||||||| ||||| |||| |||||||||||    
T  7444744 atctaagagtgtgtttggatgaagagtttagaaagggaagagaggggagggtttagttttcattttaaaattacggac 7444667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 40709292 - 40709361
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacg 464  Q
    ||||||| |||||||| | ||||||  |||||||||||| |||||  ||||||||| |||||||||||||    
T  40709292 agggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattacg 40709361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 467
Target Start/End: Complemental strand, 41676486 - 41676453
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||||||||||||| ||||||||||||||||    
T  41676486 gggagggtttacttttcatttttaaattacggac 41676453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 515
Target Start/End: Original strand, 42230617 - 42230658
Alignment:
Q  474 acatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||  |||||| |||||||||||||||||||||||    
T  42230617 acatgttttttaaaaataaattaagtgtgattgaagtattat 42230658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 467
Target Start/End: Original strand, 44210946 - 44210979
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||||||||||||||||||||||||| ||||    
T  44210946 gggagggtttacttttcgtttttaaattatggac 44210979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 471 - 515
Target Start/End: Original strand, 7444571 - 7444615
Alignment:
Q  471 atgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||||||||||| || |  ||||||||||||||||||||    
T  7444571 atgacatgtttttctaaattaaaccaagtgtgattgaagtattat 7444615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 20607223 - 20607263
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg 436  Q
    ||||||| |||| ||||||||||||| ||||||||||||||    
T  20607223 agggtgtgtttgaattgagggtttaggaggggaagggaggg 20607263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 479 - 515
Target Start/End: Original strand, 41676363 - 41676399
Alignment:
Q  479 tttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  41676363 tttttctaaaataaattaagtgtgattgtagtattat 41676399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 7e-38; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 31543316 - 31543196
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| ||| |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||| |||||||||||||||||| ||    
T  31543316 agggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattatggaccatataacatgtttttctaaaataaat 31543217  T
Q  495 taagtgtgattgaagtattat 515  Q
    |||||||||||||||||||||    
T  31543216 taagtgtgattgaagtattat 31543196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 7503198 - 7503078
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||||| ||| | |||||| ||||||| |||||||||||||||||||||||||| ||| ||||| |||||||||||||||||| ||    
T  7503198 agggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaattatggattatataacatgtttttctaaaataaat 7503099  T
Q  495 taagtgtgattgaagtattat 515  Q
    ||||||||||| |||||||||    
T  7503098 taagtgtgattaaagtattat 7503078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 404 - 515
Target Start/End: Original strand, 7979148 - 7979260
Alignment:
Q  404 tttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 502  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| || |||||      
T  7979148 tttggattgagggtttagaagaggaagggagaggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgca 7979247  T
Q  503 attgaagtattat 515  Q
    |||||||||||||    
T  7979248 attgaagtattat 7979260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 396 - 508
Target Start/End: Original strand, 11033419 - 11033530
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatt 495  Q
    ||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||||  ||||||||||||||||| |||    
T  11033419 agggtgtgtttggattgagggtttagaagaggaagggaggg-gggtttacttttcttttttaaataacggactatatatcatgtttttctaaaataaatt 11033517  T
Q  496 aagtgtgattgaa 508  Q
    | |||||||||||    
T  11033518 atgtgtgattgaa 11033530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 1027094 - 1026973
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||||||| |||||||| ||||||||| | ||||||||||||| ||||| ||||||| ||||||||||||||||||||| | ||||||||||||||||     
T  1027094 taagggtgtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattacggactatataa-atgtttttctaaaataa 1026996  T
Q  493 attaagtgtgattgaagtattat 515  Q
    ||||||| |||||||||||||||    
T  1026995 attaagtatgattgaagtattat 1026973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 404 - 515
Target Start/End: Original strand, 1281151 - 1281263
Alignment:
Q  404 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 502  Q
    |||||||||||||||||| ||||||||||| | ||||||||||||||| |||||||||||||||| |||| |||||||||||||| ||| || |||||||    
T  1281151 tttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagtgtg 1281250  T
Q  503 attgaagtattat 515  Q
     ||||||||||||    
T  1281251 gttgaagtattat 1281263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 433 - 515
Target Start/End: Complemental strand, 42650542 - 42650460
Alignment:
Q  433 agggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  42650542 agggagagtttacttttcgtttttaaattacggaatatataacatgtttttctaaaataaattaagtgtgattgaagtattat 42650460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 398 - 515
Target Start/End: Complemental strand, 30479959 - 30479841
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 496  Q
    ||||| |||||||||||||||||  || |||| |||| |||||||||| ||||| |||||||| ||| ||||||||| ||||||||||||||||| || |    
T  30479959 ggtgtgtttggattgagggtttatgagaggaatggagcggagggtttagttttcttttttaaactacagactatatgtcatgtttttctaaaataaatca 30479860  T
Q  497 agtgtgattgaagtattat 515  Q
    |||||||||||||||||||    
T  30479859 agtgtgattgaagtattat 30479841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 515
Target Start/End: Original strand, 6315063 - 6315182
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggagggagg-gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    |||||||||| |||||||||||||||||| ||| ||| |||||||||  ||||| ||   ||||| ||||||||||||||| ||||||||||||||||||    
T  6315063 ctaagggtgtgtttggattgagggtttaggaggcgaa-ggagggaggaatttacatt---ttttttaattacggactatataacatgtttttctaaaata 6315158  T
Q  492 tattaagtgtgattgaagtattat 515  Q
     |||||||||||||||||||||||    
T  6315159 aattaagtgtgattgaagtattat 6315182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 434 - 515
Target Start/End: Original strand, 16652988 - 16653069
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||| || ||||||||||||||||||||    
T  16652988 gggagggtttacttttcttttttaaattacggactatataacatgtttttataaaataaatcaagtgtgattgaagtattat 16653069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 9718723 - 9718603
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||||||||||| ||| |||||||||| |  ||||||||||| ||||||||||| | ||||||| |||| ||||||||||||  ||    
T  9718723 agggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaattatgaactatataacatatttttctaaaattcat 9718624  T
Q  495 taagtgtgattgaagtattat 515  Q
    ||| |||||||||||||||||    
T  9718623 taattgtgattgaagtattat 9718603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 404 - 515
Target Start/End: Complemental strand, 11575642 - 11575530
Alignment:
Q  404 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 502  Q
    |||||||| ||||||||| | | |||||||||| |||||||||||||| ||||||||||||  | ||||| |||||||||||||||||| ||||||||||    
T  11575642 tttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattacaaattatataacatgtttttctaaaataaattaagtgtg 11575543  T
Q  503 attgaagtattat 515  Q
    ||| |||||||||    
T  11575542 attaaagtattat 11575530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 392 - 515
Target Start/End: Complemental strand, 12022391 - 12022267
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 490  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||| |||| | ||||||  |||||||||||||||| || | | |||||||| ||||||    
T  12022391 tctaagggtgtgtttggattgagggtttaggaggggaaaggaggggagggctcacttttattttttaaattacggacaatgtaaaatgtttttttaaaat 12022292  T
Q  491 atattaagtgtgattgaagtattat 515  Q
    | |||||||||  ||||||||||||    
T  12022291 aaattaagtgtttttgaagtattat 12022267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 40990427 - 40990308
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| ||||||||||||||| || || |||||||||| ||| ||||  ||||| ||||||||||||||||||||| |||||||| | ||||||| ||    
T  40990427 agggtgtgtttggattgagggtt-aggagaggaagggaggagagagtttgtttttcttttttaaattacggactatataacatgtttctttaaaataaat 40990329  T
Q  495 taagtgtgattgaagtattat 515  Q
    ||||| |||||||||||||||    
T  40990328 taagtctgattgaagtattat 40990308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 515
Target Start/End: Complemental strand, 41103709 - 41103630
Alignment:
Q  436 gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||||| ||||||||||||   |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  41103709 gagggtttacttttcttttttaaattacaagctatataacatgtttttctaaaataaattaagtgtgattgaagtattat 41103630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 398 - 515
Target Start/End: Original strand, 28083744 - 28083862
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 496  Q
    ||||| || ||||||||||||||| ||||||||||||| |||  |||  ||||| |||||||||||| ||| |||| |||||||| ||||||||| ||||    
T  28083744 ggtgtgttcggattgagggtttaggaggggaagggaggagagattttgtttttcttttttaaattacagacaatataacatgtttctctaaaataaatta 28083843  T
Q  497 agtgtgattgaagtattat 515  Q
    |||||||||| ||||||||    
T  28083844 agtgtgattggagtattat 28083862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 396 - 515
Target Start/End: Original strand, 2248452 - 2248572
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| ||||||||||| |||||| |||||||||||||| || ||| | ||| | ||||||||||||||  ||||| |||||||||||||||||| ||    
T  2248452 agggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacggtttatataacatgtttttctaaaataaat 2248551  T
Q  495 taagtgtgattgaagtattat 515  Q
     ||||||||||| | ||||||    
T  2248552 caagtgtgattggaatattat 2248572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 392 - 515
Target Start/End: Original strand, 10028106 - 10028230
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 490  Q
    ||||||| ||| ||||||| |||||||||| ||||||  ||||| |||  |||||||||| |||||||||||||||| |||| |||| ||||| ||||||    
T  10028106 tctaaggatgtgtttggatcgagggtttaggaggggataggaggtgagattttacttttcttttttaaattacggaccatataacatatttttttaaaat 10028205  T
Q  491 atattaagtgtgattgaagtattat 515  Q
    | |||||||||| ||||||| ||||    
T  10028206 aaattaagtgtggttgaagtcttat 10028230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 431 - 515
Target Start/End: Original strand, 37032415 - 37032499
Alignment:
Q  431 ggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||| ||||| ||||| |||||||||||| |||||||| |||||||||| ||||||| ||||||||||||| |||||||||    
T  37032415 ggagggagagtttatttttcttttttaaattacagactatataacatgtttttttaaaataaattaagtgtgattaaagtattat 37032499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 409 - 515
Target Start/End: Complemental strand, 3727086 - 3726979
Alignment:
Q  409 attgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattga 507  Q
    ||||||| ||||| |||| |||||||| ||| ||||||||||| |||||| ||||| |||||||| |||||||||||||||||| ||||||  |||||||    
T  3727086 attgaggatttaggagggaaagggaggtgagagtttacttttcttttttagattacagactatataacatgtttttctaaaataaattaagcatgattga 3726987  T
Q  508 agtattat 515  Q
    | ||||||    
T  3726986 aatattat 3726979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 434 - 515
Target Start/End: Original strand, 11785565 - 11785646
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||| ||||||||||| ||||||||||| | ||||||| |||||||||||||||||| ||||| || ||||||||||||||    
T  11785565 gggagagtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaattgcgattgaagtattat 11785646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 396 - 496
Target Start/End: Original strand, 13404976 - 13405077
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    |||||||  ||||||||||||||||| ||||||||||| |||||   ||||||||| ||||||||| || |||||||| |||||||||||||||||| ||    
T  13404976 agggtgtggttggattgagggtttaggaggggaagggatgggagaaattacttttcttttttaaataacagactatataacatgtttttctaaaataaat 13405075  T
Q  495 ta 496  Q
    ||    
T  13405076 ta 13405077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 43732931 - 43732859
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 467  Q
    ||||||| ||||||| |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||    
T  43732931 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggac 43732859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 404 - 512
Target Start/End: Original strand, 33922533 - 33922637
Alignment:
Q  404 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtga 503  Q
    |||||||||||||||||| | |||||||||| |    |||||||||| |||||||||| |||||||||| |||| ||||| ||||||| ||| ||| |||    
T  33922533 tttggattgagggtttaggaagggaagggagag----tttacttttcttttttaaattccggactatataacatatttttttaaaataaatttagtatga 33922628  T
Q  504 ttgaagtat 512  Q
    |||||||||    
T  33922629 ttgaagtat 33922637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 515
Target Start/End: Complemental strand, 37923320 - 37923202
Alignment:
Q  399 gtgtatttggattgagggtttagaag-gggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 496  Q
    |||| |||||||| ||||||||| || ||||||||| ||| ||||||| | ||  |||||||||||| |||||||| |||||||||||||||||| ||||    
T  37923320 gtgtgtttggattaagggtttaggagagggaagggatggaagggtttaatatttatttttaaattacagactatataacatgtttttctaaaataaatta 37923221  T
Q  497 agtgtgattgaagtattat 515  Q
    |||| |||| || ||||||    
T  37923220 agtgcgattaaaatattat 37923202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 29358587 - 29358463
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagg--gagggtttactttt-cgtttttaaattacggactatatgacatgtttttctaaaat 490  Q
    ||||| ||| ||||||||||| |||||  ||||||| ||| |  ||| |||||||||| | |||||||| |||||| ||||| |||| |||||||| |||    
T  29358587 taaggatgtgtttggattgagagtttacgaggggaaaggaagaggagtgtttactttttcatttttaaactacggattatataacatatttttctagaat 29358488  T
Q  491 atattaagtgtgattgaagtattat 515  Q
    | |||||||||||||||||||||||    
T  29358487 aaattaagtgtgattgaagtattat 29358463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 413 - 515
Target Start/End: Original strand, 31738440 - 31738543
Alignment:
Q  413 agggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagta 511  Q
    ||||||||| |||||||| || ||||| ||||  ||||  |||||||||||| |||||||| |||||||| |||| |||| ||||||||| |||||||||    
T  31738440 agggtttaggaggggaagagaagggagagttttttttttttttttaaattacagactatataacatgtttctctagaataaattaagtgtaattgaagta 31738539  T
Q  512 ttat 515  Q
    ||||    
T  31738540 ttat 31738543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 515
Target Start/End: Original strand, 30664407 - 30664481
Alignment:
Q  441 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||| ||||| |||||||||| | |||| ||| ||||||||||| |||||| |||||||||||||||||||||||    
T  30664407 tttatttttcttttttaaattgcagactttataacatgtttttcaaaaataaattaagtgtgattgaagtattat 30664481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 394 - 483
Target Start/End: Original strand, 31543070 - 31543160
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    ||||||| | ||||||| |||||||||  |||||||||||||| |||||||||||||| |||||||||||||||   ||||| ||||||||    
T  31543070 taagggtatgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacggaaactatgaaatgttttt 31543160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 464
Target Start/End: Complemental strand, 8815387 - 8815316
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 464  Q
    ||||||||| |||||||||||||||||| ||||| ||||| ||||||||| ||||||  |||||||||||||    
T  8815387 taagggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacg 8815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 399 - 515
Target Start/End: Complemental strand, 24243287 - 24243171
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 497  Q
    |||| ||||||| ||||||||| | |||||| |||||| |||| ||||||| | ||| |||||||| ||| |||||| || ||||| | ||||  |||||    
T  24243287 gtgtgtttggatcgagggttta-agggggaatggaggggagggcttactttccttttctaaattacagacaatatgagatctttttttcaaattaattaa 24243189  T
Q  498 gtgtgattgaagtattat 515  Q
    ||||||||||||||||||    
T  24243188 gtgtgattgaagtattat 24243171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 36309079 - 36309018
Alignment:
Q  404 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 464  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||    
T  36309079 tttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattacg 36309018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 467
Target Start/End: Original strand, 3726863 - 3726935
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||| ||||||| |||||||||| |||||||||| | ||| |||||| ||||| ||||||||||||||||    
T  3726863 agggtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacggac 3726935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 483
Target Start/End: Original strand, 11575415 - 11575494
Alignment:
Q  404 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    ||||||| |||| ||||| || ||||||||||||||||||||||||| || |||||||| |||   ||||| ||||||||    
T  11575415 tttggatggaggatttaggagaggaagggagggagggtttacttttcattcttaaattaaggatactatgaaatgttttt 11575494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 389 - 467
Target Start/End: Complemental strand, 11785777 - 11785698
Alignment:
Q  389 aaatctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    |||||| ||||||| ||||||| |||||||||| |||| ||| || ||||||||||  ||||| ||||||||||||||||    
T  11785777 aaatcttagggtgtgtttggatggagggtttaggagggtaagagaagggagggtttgattttcatttttaaattacggac 11785698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 515
Target Start/End: Original strand, 16024155 - 16024274
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatatatt 495  Q
    ||||| |||||||||||||||||| | ||||||||| ||||| | | | |||| |||||||||||||| || |||| | ||| ||||| | ||||| |||    
T  16024155 ggtgtgtttggattgagggtttaggaagggaagggaggggagagctcagtttttgtttttaaattacgaacaatataaaatgattttttttaaataaatt 16024254  T
Q  496 aagtgtgattgaagtattat 515  Q
    ||||||  ||||||||||||    
T  16024255 aagtgtttttgaagtattat 16024274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 467
Target Start/End: Complemental strand, 16024400 - 16024326
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||| |||| ||||||| |||| ||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||    
T  16024400 ctaagagtgtgtttggatggaggatttaggaggggaagggaggggagagtttacttttc-tttttaaattacggac 16024326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 463
Target Start/End: Original strand, 43732676 - 43732747
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattac 463  Q
    |||||||||| |||||||||||||||||| |||||||||||| |||||  | ||||||  ||||||||||||    
T  43732676 ctaagggtgtgtttggattgagggtttaggaggggaagggagaggaggactcacttttattttttaaattac 43732747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 4247764 - 4247641
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggag-----ggagggtttacttttc-gtttttaaattacggactatatgacatgtttttctaaaa 489  Q
    ||||||| |||||||||| ||||||| ||||||||||||     ||||||||||||||||  ||||||||||| | |   ||| | |||||||| |||||    
T  4247764 agggtgtgtttggattgaaggtttaggaggggaagggaggtagaggagggtttacttttctttttttaaattatgaa--ttattatatgtttttttaaaa 4247667  T
Q  490 tatattaagtgtgattgaagtattat 515  Q
    || ||||||| ||||| |||||||||    
T  4247666 taaattaagtatgatttaagtattat 4247641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 464
Target Start/End: Complemental strand, 7394706 - 7394636
Alignment:
Q  395 aagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 464  Q
    |||| ||| |||||||||||||||||| ||||||||||| |||| |||| ||||||  |||||||||||||    
T  7394706 aaggatgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattacg 7394636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 12022142 - 12022212
Alignment:
Q  396 agggtgtatttggattgagggttt-agaaggggaagggaggg-agggtttacttttcgtttttaaattacg 464  Q
    ||||||| || |||| |||||||| ||||||||||||||||| |||| ||||||||| |||||||||||||    
T  12022142 agggtgtgttaggatggagggtttgagaaggggaagggaggggagggcttacttttcttttttaaattacg 12022212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 463
Target Start/End: Complemental strand, 30365376 - 30365306
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattac 463  Q
    ||||||||| ||||||| |||| |||||||||| ||||||||| |||| || |||||| ||||||||||||    
T  30365376 taagggtgtgtttggatggaggatttagaagggtaagggaggggagggcttccttttcttttttaaattac 30365306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 41103502 - 41103568
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaa 459  Q
    ||||||||| ||||||| |||||||||| |||||||| ||||| |||||||  ||||||||||||||    
T  41103502 taagggtgtgtttggatggagggtttaggaggggaagagaggggagggtttgattttcgtttttaaa 41103568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 423 - 483
Target Start/End: Complemental strand, 16653166 - 16653105
Alignment:
Q  423 aggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||||||  ||||| ||||||||    
T  16653166 aggggaagggaggagagggtttaattttcatttttaaattacggacattatgaaatgttttt 16653105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 467
Target Start/End: Original strand, 8815141 - 8815213
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggac 467  Q
    ||||||| ||||||| |||||||||| |||||||| |||| || |  ||||||||| ||||||||||||||||    
T  8815141 agggtgtgtttggatggagggtttaggaggggaagagaggtgatgacttacttttcttttttaaattacggac 8815213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 515
Target Start/End: Original strand, 30365130 - 30365250
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||||||||||| ||| ||| ||| ||||| ||| ||||||  ||||||||||||| || | || | || ||||| || |||| ||    
T  30365130 agggtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacgaacaacataaaatatttttttagaataaat 30365229  T
Q  495 taagtgtgattgaagtattat 515  Q
    |||||||  ||||||| ||||    
T  30365230 taagtgtttttgaagtgttat 30365250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 31738667 - 31738595
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 467  Q
    ||||||| ||||||| |||||||||| ||||||||  |||| ||||||||  |||| ||||||||||||||||    
T  31738667 agggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggac 31738595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 515
Target Start/End: Original strand, 34633819 - 34633857
Alignment:
Q  477 tgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  34633819 tgtttttctaaaataaatcaagtgtgattgaagtattat 34633857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 467
Target Start/End: Complemental strand, 34634389 - 34634315
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||||| ||||||| ||| |||||| ||||||||||| | ||||||| | ||||  ||||||||||||||||    
T  34634389 taagggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacggac 34634315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 515
Target Start/End: Original strand, 36308881 - 36308963
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttc-taaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||| | ||||| || ||||| ||  |||||||| ||||||||||  ||||||| | |||||||||||||||||||||    
T  36308881 gggagggttcatttttctttgttaaactagagactatataacatgttttttataaaataaactaagtgtgattgaagtattat 36308963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 467
Target Start/End: Complemental strand, 30582030 - 30581985
Alignment:
Q  423 aggggaagggaggg-agggtttacttttcgtttttaaattacggac 467  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||||    
T  30582030 aggggaagggaggggagggcttacttttcttttttaaattacggac 30581985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 515
Target Start/End: Complemental strand, 38198245 - 38198173
Alignment:
Q  442 ttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||| |||||||||||| |||  ||| |  ||||||| ||||||  |||||||||||||||||||||||    
T  38198245 ttacttttcatttttaaattacagacactataaagtgttttt-taaaatgaattaagtgtgattgaagtattat 38198173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 8672038 - 8671998
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg 436  Q
    ||||||| |||||||||||| ||||||||||||||| ||||    
T  8672038 agggtgtgtttggattgaggatttagaaggggaaggtaggg 8671998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 41110567 - 41110445
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||||||| ||||||||||||||||   |||||||||||| ||| ||||||||||||||||||||||||||||||| || ||||||||||| ||||||     
T  41110567 taagggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacggactagataacatgtttttcgaaaataa 41110468  T
Q  493 attaagtgtgattgaagtattat 515  Q
    |||||||||||||||||||||||    
T  41110467 attaagtgtgattgaagtattat 41110445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 392 - 515
Target Start/End: Original strand, 24560213 - 24560337
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 490  Q
    ||||||||||| |||||||| ||||||||| |||||||||||||| |||||||  ||||| ||||||||||||||||||| | |||||||||||||||||    
T  24560213 tctaagggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactatgtaacatgtttttctaaaat 24560312  T
Q  491 atattaagtgtgattgaagtattat 515  Q
    | ||||| |||||||||||||||||    
T  24560313 aaattaaatgtgattgaagtattat 24560337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 25655218 - 25655096
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||||||| ||||||||||||||| |  ||| |||||||||| ||||||||  |||| ||||||||||||||||||||| ||||||||||||||||||     
T  25655218 taagggtgtgtttggattgagggttgaagaggagaagggaggggagggtttaactttcatttttaaattacggactatataacatgtttttctaaaataa 25655119  T
Q  493 attaagtgtgattgaagtattat 515  Q
    |||||||||||||||||||||||    
T  25655118 attaagtgtgattgaagtattat 25655096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 404 - 515
Target Start/End: Original strand, 14897984 - 14898096
Alignment:
Q  404 tttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 502  Q
    ||||||||||| |||||| |||||||||||| |||   |||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  14897984 tttggattgagagtttaggaggggaagggagaggaaattttacttttcttttttaaattacagactatatgacatgtttttctaaaataaattaagtgtg 14898083  T
Q  503 attgaagtattat 515  Q
    |||||||||||||    
T  14898084 attgaagtattat 14898096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 392 - 515
Target Start/End: Original strand, 21773778 - 21773902
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 490  Q
    ||||||||| | |||||||||| ||||||| ||||||||||| ||| |||| |||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  21773778 tctaagggtatgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacggactatataacatgtttttctaaaat 21773877  T
Q  491 atattaagtgtgattgaagtattat 515  Q
    | ||||||||||||||||| |||||    
T  21773878 aaattaagtgtgattgaagaattat 21773902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 28582753 - 28582633
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||| ||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||||| |||| |||||||||||||| ||| ||    
T  28582753 agggtgtgtttggactgaggatttaggaggggaagggaggggagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaat 28582654  T
Q  495 taagtgtgattgaagtattat 515  Q
     ||||||| ||||||||||||    
T  28582653 caagtgtggttgaagtattat 28582633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 30200343 - 30200219
Alignment:
Q  392 tctaagggtgtatttggattgaggg----tttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgtttttcta 486  Q
    ||||||||||| |||||||||||||    | ||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  30200343 tctaagggtgtgtttggattgagggagggtataggaggggaagggagggaagggtttacttttcttttttaaattacggactatataacatgtttttcta 30200244  T
Q  487 aaatatattaagtgtgattgaagta 511  Q
    ||||| || |||||||||| |||||    
T  30200243 aaataaatcaagtgtgattaaagta 30200219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 404 - 515
Target Start/End: Original strand, 46204894 - 46205006
Alignment:
Q  404 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 502  Q
    ||||||| |||||||||| ||| |||| || | ||| ||||||||||| ||||||||||| | ||||||| |||||||||||||||||| ||||||||||    
T  46204894 tttggatcgagggtttagcaggagaagagatgagagtgtttacttttcttttttaaattatgaactatataacatgtttttctaaaataaattaagtgtg 46204993  T
Q  503 attgaagtattat 515  Q
    |||||||||||||    
T  46204994 attgaagtattat 46205006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 393 - 515
Target Start/End: Original strand, 651737 - 651851
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    |||||||||| |||||||||||||||||| |||||        ||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||     
T  651737 ctaagggtgtgtttggattgagggtttaggagggg--------gagggtttacttttcttttttaaattatagactatataacatgtttttctaaaataa 651828  T
Q  493 attaagtgtgattgaagtattat 515  Q
    ||||||||||||| || ||||||    
T  651829 attaagtgtgattaaaatattat 651851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 404 - 515
Target Start/End: Complemental strand, 220633 - 220521
Alignment:
Q  404 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 502  Q
    ||||||| |||||||||| ||| |||||||||| ||  |||||||||| ||||||||||||||||||| | |||||||||||||||||| || |||| ||    
T  220633 tttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaatcaagtatg 220534  T
Q  503 attgaagtattat 515  Q
    |||||||| ||||    
T  220533 attgaagtgttat 220521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 18654847 - 18654724
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttc-gtttttaaattacggactatatgacatgtttttctaaaata 491  Q
    |||| |||| |||| ||||||||||||| ||||||||||| ||||| ||||  ||| |  ||||||||||||||||||||| |||||||| |||||||||    
T  18654847 taagagtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttttttaaattacggactatataacatgtttctctaaaata 18654748  T
Q  492 tattaagtgtgattgaagtattat 515  Q
     ||||||||| |||||||||||||    
T  18654747 aattaagtgtaattgaagtattat 18654724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 434 - 515
Target Start/End: Complemental strand, 2387965 - 2387884
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||||||| ||| ||||| |||| |||||| |||||||||||||||||| ||||||||||||| || ||||||    
T  2387965 gggagggtttacttttcttttctaaatcacggtctatataacatgtttttctaaaataaattaagtgtgattaaattattat 2387884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 24253966 - 24253894
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 467  Q
    ||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  24253966 agggtgtgtttggatggagggtttagaaggggaagggagggaaggatttacttttcttttttaaattacggac 24253894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 37102383 - 37102272
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatatat 494  Q
    ||||||| |||||||||||||||||| |||||||||         ||||||| || ||||||||||||||||||||| ||||| ||||||||||||| ||    
T  37102383 agggtgtgtttggattgagggtttaggaggggaagg---------tttacttatcttttttaaattacggactatataacatgttttttctaaaataaat 37102293  T
Q  495 taagtgtgattgaagtattat 515  Q
     ||||||| ||||||||||||    
T  37102292 caagtgtggttgaagtattat 37102272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 405 - 515
Target Start/End: Complemental strand, 27542166 - 27542055
Alignment:
Q  405 ttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtga 503  Q
    |||||| |||||||||  ||||| |||||||| || ||||  ||||| ||||||||||| | ||||||| |||| ||||||||||||| ||||| |||||    
T  27542166 ttggatcgagggtttacgaggggcagggaggggagagtttgtttttcttttttaaattatgaactatataacatatttttctaaaataaattaactgtga 27542067  T
Q  504 ttgaagtattat 515  Q
    ||||||||||||    
T  27542066 ttgaagtattat 27542055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 467
Target Start/End: Complemental strand, 34641237 - 34641162
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    |||||||||| ||||||| |||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  34641237 ctaagggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacggac 34641162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 391 - 515
Target Start/End: Complemental strand, 54574605 - 54574485
Alignment:
Q  391 atctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 490  Q
    |||| ||||||| |||||||||||||||||| | |||||||||  |    |||  ||||| ||||| |||||| |||||||| ||| |||||||||||||    
T  54574605 atcttagggtgtgtttggattgagggtttaggaagggaagggatag----tttgtttttctttttttaattacagactatataacacgtttttctaaaat 54574510  T
Q  491 atattaagtgtgattgaagtattat 515  Q
    | |||||| ||||||||||||||||    
T  54574509 aaattaagcgtgattgaagtattat 54574485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 426 - 515
Target Start/End: Complemental strand, 41040164 - 41040074
Alignment:
Q  426 ggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||| |||||||||||||||| |||||||||||||| || || ||||| |||| ||||||| | |||| ||||||||||||||||    
T  41040164 ggaagggaggagagggtttacttttcgcttttaaattacggattagataacatgattttttaaaataaagtaagcgtgattgaagtattat 41040074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 434 - 515
Target Start/End: Original strand, 46556182 - 46556263
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||| ||||| ||||| |||||||||||| |||||||| | ||||||||| |||||| ||| |||||||||||||||||||    
T  46556182 gggagagtttaattttcttttttaaattacagactatataatatgtttttccaaaataaattgagtgtgattgaagtattat 46556263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 515
Target Start/End: Complemental strand, 6803456 - 6803325
Alignment:
Q  385 aataaaatctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    |||||| | |||| |||| |||||||||| ||||||| |||||||| |||| ||| ||||| ||||| |||||||||||| ||||||   | | ||||||    
T  6803456 aataaactttaagtgtgtgtttggattgaaggtttaggaggggaagagaggagagagtttaattttcttttttaaattacagactatgcaataagttttt 6803357  T
Q  484 ctaaaatatattaagtgtgattgaagtattat 515  Q
     ||||||| |||| ||||||||||| ||||||    
T  6803356 ataaaataaattatgtgtgattgaactattat 6803325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 452 - 515
Target Start/End: Complemental strand, 10748484 - 10748421
Alignment:
Q  452 tttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||||||||||  |||||||||    
T  10748484 tttttaaattacggagtatataacatgtttttctaaaataaattaagtgtgataaaagtattat 10748421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 515
Target Start/End: Complemental strand, 43005981 - 43005863
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 496  Q
    ||||| ||||||||||||||||| ||||| |||| | | |||| |||| ||||| |||||||||| |  ||||||| |||| ||||||||||||| |||     
T  43005981 ggtgtgtttggattgagggtttataagggaaaggaaagagaggatttaattttcttttttaaattccaaactatataacatatttttctaaaataaattt 43005882  T
Q  497 agtgtgattgaagtattat 515  Q
    | | |||||||||||||||    
T  43005881 aatttgattgaagtattat 43005863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 9312715 - 9312595
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacat---gtttttctaaaat 490  Q
    |||||| || |||||||||||||||||| |||||| |||||||    |||  ||||| |||||||||||| |||||||| ||||   | |||||||||||    
T  9312715 taagggagtgtttggattgagggtttaggaggggaggggaggg----tttgattttcttttttaaattaccgactatataacatcatgattttctaaaat 9312620  T
Q  491 atattaagtgtgattgaagtattat 515  Q
    | |||||||||||||  ||||||||    
T  9312619 aaattaagtgtgatttgagtattat 9312595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 483
Target Start/End: Complemental strand, 24560461 - 24560373
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    ||||||| ||||||| |||||||||| ||||||| ||| ||||| ||||||||||| |||||||||||| |||  ||||| ||||||||    
T  24560461 agggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattaccgacactatgaaatgttttt 24560373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 467
Target Start/End: Complemental strand, 26136025 - 26135969
Alignment:
Q  412 gagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggac 467  Q
    |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||    
T  26136025 gagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggac 26135969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 404 - 515
Target Start/End: Original strand, 52473923 - 52474035
Alignment:
Q  404 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 502  Q
    ||||||||||| |||| | ||||||||  | ||||| ||| | ||||| ||||||||||||||| ||||| ||||||| || ||||||| ||||  ||||    
T  52473923 tttggattgagagtttgggaggggaagaaatgggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaattacatgtg 52474022  T
Q  503 attgaagtattat 515  Q
    |||||||||||||    
T  52474023 attgaagtattat 52474035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 511
Target Start/End: Original strand, 12790381 - 12790488
Alignment:
Q  404 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtga 503  Q
    |||||||||||||||||| || ||||| ||| |  |||||||||||| |||||| |||   | |||||| ||||||||||||| |||| ||||||||| |    
T  12790381 tttggattgagggtttaggagaggaagagagaggaggtttacttttcttttttatattgtaggctatataacatgtttttctataataaattaagtgtaa 12790480  T
Q  504 ttgaagta 511  Q
    | ||||||    
T  12790481 tcgaagta 12790488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 463
Target Start/End: Original strand, 28581183 - 28581254
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattac 463  Q
    ||||| |||| ||||||| ||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||    
T  28581183 ctaagagtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaattac 28581254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 398 - 467
Target Start/End: Original strand, 41110323 - 41110393
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggac 467  Q
    ||||| ||||||| |||| ||||| ||||||||||||| || |||||||||||| ||||||||||||||||    
T  41110323 ggtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacggac 41110393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 515
Target Start/End: Complemental strand, 10943850 - 10943738
Alignment:
Q  404 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtg 502  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||||  ||||||||||||| || ||   | |||||||| ||||||| |||||||||     
T  10943850 tttggattgagggtttatgagggaaagagaggggagggttcacttttaatttttaaattacgaacaatgcaaaatgtttttttaaaataaattaagtgtt 10943751  T
Q  503 attgaagtattat 515  Q
     ||||||||||||    
T  10943750 tttgaagtattat 10943738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 440 - 515
Target Start/End: Original strand, 52185060 - 52185136
Alignment:
Q  440 gtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||||||||||||||  | ||||| ||||| ||||||||||||| ||||| | | |||||||||||||    
T  52185060 gtttacttttcgtttttaaattacaaattatataacatgttttttctaaaataaattaaatataattgaagtattat 52185136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 467
Target Start/End: Complemental strand, 55428615 - 55428551
Alignment:
Q  404 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    |||||||||||||||||| ||||||||||| |||| | |||||||||| | ||||||||||||||    
T  55428615 tttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacggac 55428551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 515
Target Start/End: Complemental strand, 16275875 - 16275829
Alignment:
Q  469 atatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||    
T  16275875 atataacatgtttttctaaaataaatcaagtgtgattgaagtattat 16275829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 17474452 - 17474330
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||| ||| ||||||||||||||| || ||||||||||| ||||| ||| ||||||  ||||||||||||| |  || | | || |||||  ||||||     
T  17474452 taaggatgtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattacgaataatgtaaaatattttttaaaaataa 17474353  T
Q  493 attaagtgtgattgaagtattat 515  Q
    |||||||||  ||||||||||||    
T  17474352 attaagtgtttttgaagtattat 17474330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 392 - 462
Target Start/End: Original strand, 24253717 - 24253789
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaaggga--gggagggtttacttttcgtttttaaatta 462  Q
    ||||||||||| |||||||||||||||||| |||| ||||||  ||||| ||| ||||||  |||||||||||    
T  24253717 tctaagggtgtgtttggattgagggtttaggagggaaagggagggggagtgttcacttttaatttttaaatta 24253789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 508
Target Start/End: Complemental strand, 40464115 - 40464002
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||||| | |||||||||||||  || ||||  ||||| || ||||||||||| ||| ||||| | || ||| || |||| ||||||||||||| ||    
T  40464115 agggtgtatctcgattgagggtttatgagaggaatagaggggagagtttacttttcttttctaaatcaagggctacataacatatttttctaaaataaat 40464016  T
Q  495 taagtgtgattgaa 508  Q
    |||||| |||||||    
T  40464015 taagtgagattgaa 40464002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 466
Target Start/End: Complemental strand, 52474141 - 52474088
Alignment:
Q  414 gggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacgga 466  Q
    |||||||| |||||||||||| |||||||||||||||  |||||||||||||||    
T  52474141 gggtttaggaggggaagggagaggagggtttactttttatttttaaattacgga 52474088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 467
Target Start/End: Original strand, 18654600 - 18654672
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||| ||||||| |||||||||| |||| ||| || |||||||||||  |||| ||||||||||||||||    
T  18654600 agggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggac 18654672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 36569067 - 36569027
Alignment:
Q  475 catgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  36569067 catgtttttctaaaataaattaagtgtgattgaactattat 36569027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 515
Target Start/End: Original strand, 44412357 - 44412481
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 490  Q
    ||||||||||| |||| ||||||||||||| |||||||| ||||| |||  | | ||||  ||||||||||||| || || | | |  ||||| ||||||    
T  44412357 tctaagggtgtgtttgaattgagggtttaggaggggaagagaggggaggactcattttttatttttaaattacgaacaatgtaaaacatttttttaaaat 44412456  T
Q  491 atattaagtgtgattgaagtattat 515  Q
    | |||||||||  ||||||||||||    
T  44412457 aaattaagtgtttttgaagtattat 44412481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 515
Target Start/End: Original strand, 55327422 - 55327490
Alignment:
Q  447 tttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||| |||||||||||||||||| || ||||| |||||| ||||| || || ||||||||||| |||||    
T  55327422 tttcttttttaaattacggactacataacatgcttttcttaaataaatcaaatgtgattgaagcattat 55327490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 27541939 - 27541998
Alignment:
Q  404 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaatta 462  Q
    |||||||||||||||||| ||||||||||||| || |||| || |||| |||||||||||    
T  27541939 tttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaatta 27541998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 463
Target Start/End: Original strand, 51819147 - 51819206
Alignment:
Q  404 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattac 463  Q
    ||||||| || |||||||||||||||| ||||| || |||| ||||| ||||||||||||    
T  51819147 tttggatggaaggtttagaaggggaagagaggggggatttatttttcatttttaaattac 51819206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 450
Target Start/End: Original strand, 5903546 - 5903604
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttc 450  Q
    |||||||||| |||||||||||| ||||  ||||||||| | |||||||||||||||||    
T  5903546 ctaagggtgtgtttggattgaggatttaagaggggaaggcaggggagggtttacttttc 5903604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 474 - 508
Target Start/End: Original strand, 31684365 - 31684399
Alignment:
Q  474 acatgtttttctaaaatatattaagtgtgattgaa 508  Q
    |||||||||||||||||| ||||||||||||||||    
T  31684365 acatgtttttctaaaataaattaagtgtgattgaa 31684399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 511
Target Start/End: Original strand, 37236961 - 37237038
Alignment:
Q  433 agggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagta 511  Q
    |||||||| ||||||||| |||||||||||| |||  ||  | ||||||||  |||||| |||||||||||||||||||    
T  37236961 agggagggcttacttttcatttttaaattacagacgctacaaaatgttttt-gaaaataaattaagtgtgattgaagta 37237038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 515
Target Start/End: Complemental strand, 21090312 - 21090195
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 497  Q
    |||| |||||||||| ||||||| || |||||||||| ||||  | ||||||  ||||||||||| | || || | | || ||||| ||||||| |||||    
T  21090312 gtgtgtttggattgatggtttaggagaggaagggaggagaggactcacttttattttttaaattatgaacaatgtaaaatatttttttaaaataaattaa 21090213  T
Q  498 gtgtgattgaagtattat 515  Q
    ||||  ||||||||||||    
T  21090212 gtgtttttgaagtattat 21090195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 25654971 - 25655039
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacg 464  Q
    ||||||||||| ||| |||  ||||| |||||||||||||| |||||||||||||| |||||| ||||||    
T  25654971 agggtgtatttagatggaga-tttaggaggggaagggaggggagggtttacttttcatttttatattacg 25655039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 483
Target Start/End: Original strand, 30200127 - 30200176
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    ||||||||||| ||||| ||||||||||||||||  ||||| ||||||||    
T  30200127 gggagggtttagttttcatttttaaattacggacactatgaaatgttttt 30200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 483
Target Start/End: Original strand, 37102188 - 37102237
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    ||||||||||| ||||| ||||||||||||||||  ||||| ||||||||    
T  37102188 gggagggtttagttttcatttttaaattacggacactatgaaatgttttt 37102237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 515
Target Start/End: Original strand, 37807129 - 37807200
Alignment:
Q  444 acttttcgtttttaaattacggactatatgacatgtttttctaaaatata-ttaagtgtgattgaagtattat 515  Q
    ||||||| |||||||| |||| ||||||| |||| |||||  |||||| | ||||||||||||||||||||||    
T  37807129 acttttcttttttaaactacgaactatataacat-tttttaaaaaataaaattaagtgtgattgaagtattat 37807200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 399 - 512
Target Start/End: Complemental strand, 19278278 - 19278165
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 497  Q
    |||| ||||||||||| |||||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||| |||||||||||||||||| ||| |    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacggactatataacatgtttttctaaaataaattta 19278180  T
Q  498 gtgtgattgaagtat 512  Q
    || ||||||||||||    
T  19278179 gtctgattgaagtat 19278165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 392 - 515
Target Start/End: Original strand, 14515469 - 14515591
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 490  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||  ||||| |||||||||||||||||| ||   |||||| ||||||||    
T  14515469 tctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactagat--aatgtttctctaaaat 14515566  T
Q  491 atattaagtgtgattgaagtattat 515  Q
    | ||||||||||| |||||||||||    
T  14515567 aaattaagtgtgaatgaagtattat 14515591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 399 - 515
Target Start/End: Complemental strand, 30487546 - 30487429
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 497  Q
    |||| ||| |||||||||||||| |||||||||||| |||||||||| ||||  |||||||| |||||||||||| |||||||||| ||||||| || ||    
T  30487546 gtgtgtttcgattgagggtttaggaggggaagggagtggagggtttagttttattttttaaactacggactatataacatgtttttataaaataaatcaa 30487447  T
Q  498 gtgtgattgaagtattat 515  Q
    ||||||||||||||||||    
T  30487446 gtgtgattgaagtattat 30487429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 396 - 515
Target Start/End: Original strand, 33235951 - 33236071
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    |||||||||||||||||||| |||||  || |||||||| |||  ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  33235951 agggtgtatttggattgaggatttaggtggagaagggagtggaaagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaat 33236050  T
Q  495 taagtgtgattgaagtattat 515  Q
    ||||  ||||||||| |||||    
T  33236051 taagactgattgaagaattat 33236071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 398 - 515
Target Start/End: Original strand, 2893632 - 2893750
Alignment:
Q  398 ggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 496  Q
    ||||| |||||||||||||||| | | |||||  ||| |||| |||||||||||||||||||| ||| |||||||| |||||||||||||||||| ||||    
T  2893632 ggtgtgtttggattgagggtttgggaagggaaatgagcggagagtttacttttcgtttttaaactacagactatataacatgtttttctaaaataaatta 2893731  T
Q  497 agtgtgattgaagtattat 515  Q
    ||||||||||| |||||||    
T  2893732 agtgtgattgatgtattat 2893750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 399 - 515
Target Start/End: Complemental strand, 4097754 - 4097636
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgttttt-ctaaaatatatta 496  Q
    |||| |||||||||||||||||  ||||||||||||||| ||||| ||||||| |||||||||||||||| |||| |||| ||||| | |||||| ||||    
T  4097754 gtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacggacaatataacattttttttccaaaataaatta 4097655  T
Q  497 agtgtgattgaagtattat 515  Q
    |||||||||||||||||||    
T  4097654 agtgtgattgaagtattat 4097636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 407 - 515
Target Start/End: Original strand, 31849121 - 31849230
Alignment:
Q  407 ggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgatt 505  Q
    ||||||||||||||  |||||||||||||| |||||||| ||||| |||||||| ||| |||||||| |||| ||||||||||||| || ||||||||||    
T  31849121 ggattgagggtttaagaggggaagggaggggagggtttagttttcttttttaaactacagactatataacatatttttctaaaataaatcaagtgtgatt 31849220  T
Q  506 gaagtattat 515  Q
    ||||||||||    
T  31849221 gaagtattat 31849230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 396 - 511
Target Start/End: Complemental strand, 12811224 - 12811108
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||||||||||| | |||||| ||||| |||| ||||||||| | |||||||||  |||||||| | |||||||||||||||| ||    
T  12811224 agggtgtgtttggattgagggtttaggatgggaagagaggggagggattacttttcttctttaaattagagactatataatatgtttttctaaaataaat 12811125  T
Q  495 taagtgtgattgaagta 511  Q
    |||||||||||||||||    
T  12811124 taagtgtgattgaagta 12811108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 394 - 515
Target Start/End: Complemental strand, 16738241 - 16738120
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 493  Q
    ||||||| | |||||||||||||||||| | |||||||  ||||| ||||||||||| |||||||||||| || ||||| | |||||||||||||||| |    
T  16738241 taagggtttgtttggattgagggtttaggatgggaaggaggggagagtttacttttcttttttaaattacagattatataaaatgtttttctaaaataaa 16738142  T
Q  494 ttaagtgtgattgaagtattat 515  Q
     ||||||| ||| |||||||||    
T  16738141 gtaagtgttatttaagtattat 16738120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 399 - 515
Target Start/End: Complemental strand, 2892844 - 2892727
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 497  Q
    |||| |||| || |||||||| ||||| |||||||||| ||  |||||||||| |||||||| |||||||||||| ||| |||||||||||||| ||| |    
T  2892844 gtgtgtttgaatggagggtttggaaggcgaagggaggggagaatttacttttcttttttaaactacggactatataacacgtttttctaaaataaattta 2892745  T
Q  498 gtgtgattgaagtattat 515  Q
    ||||||||||| ||||||    
T  2892744 gtgtgattgaaatattat 2892727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 399 - 515
Target Start/End: Complemental strand, 21607085 - 21606968
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 497  Q
    |||| |||||||||||||||||| |||||||| |||  ||  |||||| |||||||||||||||||  ||||||| | |||||||||||||||| || ||    
T  21607085 gtgtgtttggattgagggtttaggaggggaagagagatgaatgtttacatttcgtttttaaattacaaactatattatatgtttttctaaaataaataaa 21606986  T
Q  498 gtgtgattgaagtattat 515  Q
    |||||| |||||||||||    
T  21606985 gtgtgactgaagtattat 21606968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 397 - 515
Target Start/End: Complemental strand, 9719273 - 9719155
Alignment:
Q  397 gggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatt 495  Q
    |||||| |||||||||||||||||  |||||||| || ||| ||||||| ||||| |||||||||| |||||||||| ||||| |||| |||| || |||    
T  9719273 gggtgtgtttggattgagggtttatgaggggaagagaggggtgggtttaattttcttttttaaattccggactatataacatgctttt-taaattaaatt 9719175  T
Q  496 aagtgtgattgaagtattat 515  Q
     |||||||||||||||||||    
T  9719174 tagtgtgattgaagtattat 9719155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 394 - 482
Target Start/End: Original strand, 10818227 - 10818316
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttt 482  Q
    ||||||||| |||||||||||||||||| ||||||||||| ||||  ||||| ||||| |||||||||||||||| |||| |||||||||    
T  10818227 taagggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacggacaatataacatgtttt 10818316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 492
Target Start/End: Complemental strand, 10818459 - 10818364
Alignment:
Q  397 gggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    |||||| ||||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||||||||||||  ||||| |||||||| ||||||||    
T  10818459 gggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttt-taaaatat 10818364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 455 - 513
Target Start/End: Complemental strand, 5585486 - 5585428
Alignment:
Q  455 ttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtatt 513  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||    
T  5585486 ttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaaatatt 5585428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 436 - 510
Target Start/End: Complemental strand, 6034275 - 6034201
Alignment:
Q  436 gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagt 510  Q
    |||| |||||||||| |||||||||| | |||| ||| |||||||||||||||||| ||||||||||||||||||    
T  6034275 gaggatttacttttcttttttaaattgcagactgtataacatgtttttctaaaataaattaagtgtgattgaagt 6034201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 394 - 467
Target Start/End: Original strand, 9721136 - 9721210
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||||| |||||||||| ||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  9721136 taagggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggac 9721210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 394 - 515
Target Start/End: Original strand, 1390317 - 1390440
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattacggactatatgacatgttt-ttctaaaata 491  Q
    ||||||||| ||||||| |||||||||  |||||||| | || |||  |||| ||||| |||| |||||||||||||| | |||||||| ||||||||||    
T  1390317 taagggtgtgtttggatggagggtttatgaggggaagagcagagagaatttaattttctttttaaaattacggactatgtaacatgtttattctaaaata 1390416  T
Q  492 tattaagtgtgattgaagtattat 515  Q
     ||||||| |||||||| ||||||    
T  1390417 aattaagtttgattgaaatattat 1390440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 434 - 515
Target Start/End: Original strand, 1300658 - 1300740
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttct-aaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||||||||  |||||||||||||||| ||||| |||| ||||| | || ||| |||||||||||||||||||||||    
T  1300658 gggagggtttactttatgtttttaaattacggattatataacatatttttttcaagataaattaagtgtgattgaagtattat 1300740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 394 - 467
Target Start/End: Original strand, 9719029 - 9719103
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    |||| |||| |||||||||||||||||| ||||||||||| |||||| |||| ||||| ||||||||||||||||    
T  9719029 taagcgtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacggac 9719103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 453 - 515
Target Start/End: Original strand, 13583777 - 13583839
Alignment:
Q  453 ttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||| || ||||| |||||||||||||||||| |||||||||||||||| ||||||    
T  13583777 ttttaaattacagattatataacatgtttttctaaaataaattaagtgtgattgaaatattat 13583839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 474
Target Start/End: Complemental strand, 1300866 - 1300785
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatga 474  Q
    ||||||||| ||||||| |||||||| ||||  ||| |||||| |||||||||||||| |||||||||||||||| ||||||    
T  1300866 taagggtgtgtttggatggagggtttggaagatgaatggaggggagggtttacttttcatttttaaattacggacaatatga 1300785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 515
Target Start/End: Original strand, 33041473 - 33041590
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 497  Q
    |||| ||||||||| |||||||| || |||| |||||| ||  |||| ||||| |||||||||||  |||||||| |  ||||||| ||||||| |||||    
T  33041473 gtgtgtttggattgggggtttaggagaggaaaggaggggagaatttatttttcatttttaaattatagactatataatgtgtttttttaaaataaattaa 33041572  T
Q  498 gtgtgattgaagtattat 515  Q
    ||||||||||||| ||||    
T  33041573 gtgtgattgaagtgttat 33041590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 394 - 515
Target Start/End: Original strand, 23090993 - 23091115
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 492  Q
    ||||||||| |||||||||| ||||||| ||||||||||| ||||||| | ||||||   |||||||||||| || || | | |||| ||| |||| ||     
T  23090993 taagggtgtgtttggattgaaggtttaggaggggaagggaggggagggctcacttttatcttttaaattacgaacaatctaaaatgtatttttaaactaa 23091092  T
Q  493 attaagtgtgattgaagtattat 515  Q
    |||||||||  ||||||||||||    
T  23091093 attaagtgtttttgaagtattat 23091115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 457 - 515
Target Start/End: Original strand, 34176397 - 34176455
Alignment:
Q  457 aaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||| ||||| |||||||||||||||||| || ||||||||||| ||||||||    
T  34176397 aaattacggattatataacatgtttttctaaaataaatcaagtgtgattgcagtattat 34176455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 394 - 462
Target Start/End: Original strand, 30487304 - 30487373
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaatta 462  Q
    ||||||||| ||||||| |||||||||| ||||||||||| ||||||||| ||||||| || ||||||||    
T  30487304 taagggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatta 30487373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 9721381 - 9721262
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||| ||||||||||||  | || ||| |||||  ||||||| ||||| |||||||||| ||||| |||| |||||||||| |||| || |     
T  9721381 agggtgtgtttgaattgagggtttatgaaggtaagagaggggtgggtttaattttcttttttaaattccggaccatataacatgttttt-taaattaaag 9721283  T
Q  495 taagtgtgattgaagtattat 515  Q
    | |||||||||||||||||||    
T  9721282 ttagtgtgattgaagtattat 9721262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 501
Target Start/End: Original strand, 15323225 - 15323331
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||| | | ||||||  ||||||||||||| || || | | || | ||| ||||||| ||    
T  15323225 agggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatatatttttaaaataaat 15323324  T
Q  495 taagtgt 501  Q
    |||||||    
T  15323325 taagtgt 15323331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 15353364 - 15353433
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacg 464  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||| | | ||||||  |||||||||||||    
T  15353364 agggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacg 15353433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 515
Target Start/End: Complemental strand, 30850153 - 30850036
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 497  Q
    |||| |||||||||||||||||| |||| ||| || ||||| ||||||||||   |||||||||| | | ||||| | |||||||| ||||| | ||| |    
T  30850153 gtgtgtttggattgagggtttaggagggaaagagaagggagagtttacttttttattttaaattatgaattatataatatgtttttttaaaacaaattta 30850054  T
Q  498 gtgtgattgaagtattat 515  Q
    || | |||||||||||||    
T  30850053 gtataattgaagtattat 30850036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 467
Target Start/End: Original strand, 4097231 - 4097307
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||  ||| ||||||||||  ||||| ||| ||||||    
T  4097231 tctaagggtgtgtttggattgagggtttaggaggggaaggaagatgagagtttacttttattttttgaatcacggac 4097307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 489
Target Start/End: Complemental strand, 9298735 - 9298636
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg------agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaa 489  Q
    ||||||| |||||||  |||| |||| ||||||||||||||      ||||||||||||||  |||||||||||||||  ||||| |||||||| |||||    
T  9298735 agggtgtgtttggatgaaggggttaggaggggaagggaggggaggggagggtttacttttcaattttaaattacggacattatgaaatgtttttttaaaa 9298636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 515
Target Start/End: Complemental strand, 10348986 - 10348922
Alignment:
Q  452 tttttaaattacggactatatgacatg-tttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||||||||||| ||||| ||||| |||||||  | ||||| ||||||||||||||    
T  10348986 tttttaaattacggactatataacatgttttttttaaaataattcaagtgcgattgaagtattat 10348922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 508
Target Start/End: Complemental strand, 14548850 - 14548737
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 490  Q
    ||||||||||| |||||||||||||||||  | || ||| |||  ||| ||||||||||    |||||||||||||| |||| | ||||| || ||||||    
T  14548850 tctaagggtgtgtttggattgagggtttacgatggaaagagagaagagagtttactttt----tttaaattacggacaatataaaatgttattttaaaat 14548755  T
Q  491 atattaagtgtgattgaa 508  Q
    | ||||| ||||||||||    
T  14548754 aaattaactgtgattgaa 14548737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 463
Target Start/End: Original strand, 19278042 - 19278102
Alignment:
Q  404 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattac 463  Q
    ||||||| |||||||||| ||||||||| ||| ||| ||||||||||| ||||||||||||    
T  19278042 tttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattac 19278102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 466
Target Start/End: Complemental strand, 23091195 - 23091131
Alignment:
Q  404 tttggattgagggtttagaaggggaaggga-gggagggtttacttttc-gtttttaaattacgga 466  Q
    ||||||| |||||||||| ||||||||||| ||||||| |||||||||  |||||||||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttttaaattacgga 23091131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 462
Target Start/End: Complemental strand, 14515715 - 14515648
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaatta 462  Q
    ||||||| ||||||| |||||||||| ||||||||| | |||||||||||  |||| |||||||||||    
T  14515715 agggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaatta 14515648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 467
Target Start/End: Complemental strand, 33236197 - 33236122
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 467  Q
    |||||||||||||||||| ||| |||||  || |||| |||||| || | ||||||||| ||||||||||||||||    
T  33236197 ctaagggtgtatttggatggagagtttatgagaggaaaggaggggagagattacttttcatttttaaattacggac 33236122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 436
Target Start/End: Complemental strand, 9051778 - 9051736
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaagggaggg 436  Q
    ||||||||| |||||||||||||||||  ||||||||||||||    
T  9051778 taagggtgtgtttggattgagggtttaagaggggaagggaggg 9051736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 462
Target Start/End: Original strand, 665839 - 665907
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaatta 462  Q
    ||||||||| ||||||| |||||||||| |||||||| || ||||||||| | ||||| |||||||||||    
T  665839 taagggtgtgtttggat-gagggtttaggaggggaagtgaggggagggttcatttttcatttttaaatta 665907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 508
Target Start/End: Original strand, 1395692 - 1395749
Alignment:
Q  452 tttttaaattacggactatatgacatgtttttc-taaaatatattaagtgtgattgaa 508  Q
    ||||| ||||||||||||| | ||||||||||  ||||||| ||||||||||||||||    
T  1395692 ttttttaattacggactatgtaacatgttttttataaaataaattaagtgtgattgaa 1395749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 472
Target Start/End: Complemental strand, 2893050 - 2893013
Alignment:
Q  435 ggagggtttacttttcgtttttaaattacggactatat 472  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  2893050 ggagggtttacttttcttttttaaattacgaactatat 2893013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Original strand, 14548629 - 14548670
Alignment:
Q  408 gattgagggtttagaaggggaagggagggagggtttactttt 449  Q
    |||||||||||| |||||| |||||| |||||||||||||||    
T  14548629 gattgagggtttcgaagggaaagggatggagggtttactttt 14548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 515
Target Start/End: Original strand, 26318336 - 26318425
Alignment:
Q  426 ggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||  |||||||| | ||||  ||||||||||||| |  |||| | |||||||| ||||||| |||||||||  ||||||||||||    
T  26318336 ggaaggggaggagggttcatttttattttttaaattacgaaaaatataaaatgtttttttaaaataaattaagtgtttttgaagtattat 26318425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 466
Target Start/End: Original strand, 9051529 - 9051605
Alignment:
Q  391 atctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacgga 466  Q
    |||| ||||||  |||||||||||| ||||| |||| || ||||| || |||||||||||  |||||||||||||||    
T  9051529 atcttagggtgcgtttggattgaggatttaggagggaaatggaggagatggtttactttttttttttaaattacgga 9051605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 434 - 466
Target Start/End: Original strand, 21606883 - 21606915
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacgga 466  Q
    ||||||||||||||||| |||||||||||||||    
T  21606883 gggagggtttacttttcatttttaaattacgga 21606915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 396 - 515
Target Start/End: Original strand, 6584 - 6704
Alignment:
Q  396 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 494  Q
    ||||||| |||||||||| | ||||| ||| |||||||||| |||||||||||||| |||||||||||| |||||||| || |||| |||||||||| ||    
T  6584 agggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattacagactatataacttgttattctaaaataaat 6683  T
Q  495 taagtgtgattgaagtattat 515  Q
    | |||||||||||||||||||    
T  6684 ttagtgtgattgaagtattat 6704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 434 - 515
Target Start/End: Complemental strand, 16501 - 16420
Alignment:
Q  434 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  16501 gggagggtttacttttcgtttttaactcacggactatataacatgtttgtctaaaataaattaagtgtgattgaagtattat 16420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Original strand, 16293 - 16363
Alignment:
Q  393 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaatta 462  Q
    |||||||| | ||||||| |||||||||| |||| || |||||| |||||||||||||| |||||||||||    
T  16293 ctaagggtttgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaatta 16363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 399 - 490
Target Start/End: Original strand, 1175 - 1267
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 490  Q
    |||| |||||||||||||||||| |||||||| ||||| || ||||||||||| ||||||||||||||||||| | ||||||| |||||||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacggactatgtaacatgttattctaaaat 1267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 485
Target Start/End: Complemental strand, 1644 - 1552
Alignment:
Q  394 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttct 485  Q
    ||||||||| |||| ||||||||||||| || |||| ||| ||||||| | ||||||  ||||||||||||| || || | | ||||||||||    
T  1644 taagggtgtgtttgaattgagggtttaggagaggaatggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttct 1552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 440 - 513
Target Start/End: Original strand, 15995 - 16068
Alignment:
Q  440 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtatt 513  Q
    ||||||||||| |||||||||||| |||||||| |||||||||| ||||| | |||| ||||||||||||||||    
T  15995 gtttacttttcttttttaaattacagactatataacatgtttttttaaaaaaaattatgtgtgattgaagtatt 16068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 463
Target Start/End: Complemental strand, 17786 - 17716
Alignment:
Q  392 tctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattac 463  Q
    ||||||||||| ||||||| |||||||||| || ||||||||||| ||||||||||||| ||||||||||||    
T  17786 tctaagggtgtgtttggatggagggtttaggagtggaagggaggg-gggtttacttttcttttttaaattac 17716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 483
Target Start/End: Original strand, 3150 - 3235
Alignment:
Q  399 gtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 483  Q
    |||| ||||||||||| |||||| ||||||||||| ||||| ||||||||||| |||||||||||| |||  ||||| ||||||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattacagacactatgaaatgttttt 3235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 404 - 467
Target Start/End: Complemental strand, 242452 - 242388
Alignment:
Q  404 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 467  Q
    ||||||| || |||||| ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  242452 tttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggac 242388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 515
Target Start/End: Original strand, 15320 - 15383
Alignment:
Q  452 tttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||| |||||| || || |||||||||||||||||| |||||||||| ||||||||||||    
T  15320 tttttaaactacggattacataacatgtttttctaaaataaattaagtgtggttgaagtattat 15383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 515
Target Start/End: Original strand, 18811 - 18890
Alignment:
Q  435 ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 515  Q
    |||||||||| ||||| ||||||||| || |||||||| |||||| ||||||||||| |||| |||| |||||| ||||||    
T  18811 ggagggttta-ttttcttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattat 18890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 467
Target Start/End: Complemental strand, 184843 - 184779
Alignment:
Q  404 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 467  Q
    ||||||| |||||||||| |||| |||||| ||||||||||||| ||| ||||||||||| ||||    
T  184843 tttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaattatggac 184779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 515
Target Start/End: Original strand, 37375 - 37503
Alignment:
Q  388 aaaatctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttcta 486  Q
    |||| |||||||||  |||| ||||||| ||||| |||| |||| |||| |||| | ||||||  ||||||||||||| || || | | |||||||| ||    
T  37375 aaaacctaagggtgcgtttgaattgaggatttaggagggcaaggaaggggagggctcacttttattttttaaattacgaacaatgtaaaatgttttttta 37474  T
Q  487 aaatatattaagtgtgattgaagtattat 515  Q
    ||||| || ||||||  ||||||| ||||    
T  37475 aaataaatcaagtgtttttgaagtgttat 37503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University