View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20625_high_22 (Length: 374)
Name: NF20625_high_22
Description: NF20625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20625_high_22 |
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Alignment Details
Target: chr7 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 32 - 356
Target Start/End: Complemental strand, 44727437 - 44727113
Alignment:
| Q |
32 |
aaaatttatgaagatttctagttcctagcttttcaaacgaagtaaaagtttggagcaaaataaacaaattccccgacaaaaccgagttgaagccaagcca |
131 |
Q |
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| T |
44727437 |
aaaatttatgaagatttctagttcctagcttttcaaacgaaataaaagtttggagcaaaataaacaaattccccgacaaaaccgagttgaagccaagcca |
44727338 |
T |
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| Q |
132 |
cttgaataccacataccaaacagtgcccgaaaaaccacatttagcaaacaaatgttcttctgtttcttggacatcattgcaacacactcaactcggaatc |
231 |
Q |
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| T |
44727337 |
cttgaataccacataccaaacagtgcccgaaaaaccacatttagcaaacaaatgttcttctgtttcttggacatcattgcaacacacacaactcggaatc |
44727238 |
T |
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| Q |
232 |
caactgttgccgaacacccctctcctccctaagttgcaccttgtccgtaggcgtgataaaagcaattgtcatgaaaaaatcaccacctttgaaggagtaa |
331 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44727237 |
caactgttgccgaacacccctctcctccctaagttgcaccttgtccgtaggcgtgataaaagcaattgtcatgaaaaaatcaccacctttgaaggagtaa |
44727138 |
T |
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| Q |
332 |
attgcataaaagcaattatcccaca |
356 |
Q |
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||||||||||||||||||||||||| |
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| T |
44727137 |
attgcataaaagcaattatcccaca |
44727113 |
T |
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