View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20625_low_35 (Length: 261)

Name: NF20625_low_35
Description: NF20625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20625_low_35
NF20625_low_35
[»] chr7 (28 HSPs)
chr7 (1-238)||(10481457-10481694)
chr7 (120-231)||(17842665-17842775)
chr7 (123-238)||(37109847-37109961)
chr7 (123-249)||(7334769-7334894)
chr7 (120-249)||(18797301-18797427)
chr7 (124-249)||(38258521-38258645)
chr7 (121-249)||(32821114-32821241)
chr7 (155-247)||(38053493-38053584)
chr7 (123-249)||(27283719-27283844)
chr7 (123-249)||(37346997-37347122)
chr7 (124-249)||(24211717-24211841)
chr7 (121-249)||(30055499-30055627)
chr7 (125-204)||(44413484-44413564)
chr7 (123-249)||(5657542-5657667)
chr7 (122-238)||(43686015-43686129)
chr7 (123-249)||(4582894-4583019)
chr7 (125-249)||(11071182-11071306)
chr7 (125-236)||(23111167-23111277)
chr7 (139-238)||(31520795-31520893)
chr7 (122-204)||(31579174-31579256)
chr7 (125-238)||(27421451-27421563)
chr7 (121-245)||(9355891-9356014)
chr7 (121-231)||(12390709-12390818)
chr7 (120-189)||(26524447-26524516)
chr7 (123-249)||(8861260-8861385)
chr7 (123-249)||(34362210-34362334)
chr7 (125-178)||(8299192-8299245)
chr7 (208-249)||(29173599-29173640)
[»] chr1 (36 HSPs)
chr1 (125-249)||(15752027-15752150)
chr1 (122-245)||(18422646-18422768)
chr1 (121-250)||(37618948-37619078)
chr1 (120-249)||(8222124-8222249)
chr1 (122-249)||(10182063-10182189)
chr1 (146-249)||(28564836-28564938)
chr1 (119-249)||(10922719-10922848)
chr1 (121-259)||(32267028-32267165)
chr1 (121-249)||(1547281-1547408)
chr1 (147-238)||(37451306-37451396)
chr1 (152-238)||(51128884-51128969)
chr1 (123-249)||(23999343-23999468)
chr1 (123-249)||(30327007-30327132)
chr1 (123-249)||(42721035-42721160)
chr1 (122-247)||(2959743-2959867)
chr1 (121-238)||(15382927-15383043)
chr1 (122-249)||(19899824-19899950)
chr1 (122-249)||(30254419-30254544)
chr1 (125-249)||(238568-238690)
chr1 (125-249)||(28769651-28769773)
chr1 (122-223)||(30254853-30254952)
chr1 (123-204)||(3309144-3309225)
chr1 (155-240)||(27563969-27564053)
chr1 (165-249)||(32216093-32216176)
chr1 (155-249)||(27763366-27763458)
chr1 (146-236)||(9903122-9903211)
chr1 (121-187)||(22170748-22170814)
chr1 (155-237)||(46931439-46931520)
chr1 (123-204)||(7079173-7079254)
chr1 (121-238)||(48620631-48620747)
chr1 (121-237)||(16415639-16415755)
chr1 (123-187)||(38823210-38823274)
chr1 (121-203)||(34012477-34012559)
chr1 (121-238)||(3534926-3535042)
chr1 (121-238)||(11742416-11742532)
chr1 (139-238)||(27267265-27267361)
[»] chr4 (34 HSPs)
chr4 (121-237)||(34361589-34361704)
chr4 (121-242)||(50697240-50697360)
chr4 (121-204)||(4396324-4396407)
chr4 (122-226)||(25184112-25184215)
chr4 (121-249)||(25701143-25701270)
chr4 (119-249)||(55477977-55478110)
chr4 (121-238)||(3042609-3042725)
chr4 (121-237)||(32912678-32912793)
chr4 (125-249)||(36493774-36493897)
chr4 (122-249)||(37663827-37663951)
chr4 (123-249)||(19089539-19089664)
chr4 (119-249)||(27396612-27396741)
chr4 (121-219)||(35021151-35021248)
chr4 (121-226)||(4205114-4205218)
chr4 (123-245)||(19440738-19440860)
chr4 (147-204)||(53124311-53124368)
chr4 (123-249)||(7703517-7703642)
chr4 (120-249)||(9139244-9139370)
chr4 (122-231)||(879652-879760)
chr4 (121-249)||(29584286-29584411)
chr4 (125-249)||(47253751-47253873)
chr4 (121-204)||(7152236-7152319)
chr4 (125-236)||(17167715-17167825)
chr4 (125-236)||(17173292-17173402)
chr4 (123-238)||(39397918-39398032)
chr4 (149-249)||(6864061-6864160)
chr4 (122-245)||(37287732-37287855)
chr4 (121-172)||(47073656-47073707)
chr4 (123-189)||(46884179-46884245)
chr4 (140-249)||(23761089-23761197)
chr4 (121-238)||(30002721-30002837)
chr4 (123-188)||(53337559-53337624)
chr4 (119-187)||(17272007-17272075)
chr4 (125-245)||(34948187-34948306)
[»] chr3 (28 HSPs)
chr3 (122-249)||(3655262-3655388)
chr3 (123-249)||(51213041-51213166)
chr3 (121-249)||(48354930-48355057)
chr3 (122-245)||(40552323-40552445)
chr3 (125-222)||(46297849-46297945)
chr3 (122-249)||(26941320-26941446)
chr3 (123-249)||(20373356-20373481)
chr3 (123-249)||(37203058-37203183)
chr3 (121-238)||(34132924-34133040)
chr3 (121-249)||(35844315-35844442)
chr3 (121-249)||(4761709-4761838)
chr3 (156-249)||(47481546-47481638)
chr3 (169-249)||(42506135-42506214)
chr3 (123-249)||(4015451-4015576)
chr3 (139-249)||(11357424-11357534)
chr3 (123-249)||(37157699-37157823)
chr3 (149-226)||(29099372-29099448)
chr3 (149-237)||(54505825-54505912)
chr3 (166-204)||(41585411-41585449)
chr3 (121-191)||(55343401-55343471)
chr3 (122-249)||(7327542-7327669)
chr3 (119-175)||(21193593-21193649)
chr3 (120-204)||(54828805-54828888)
chr3 (126-204)||(22446168-22446247)
chr3 (171-237)||(21009874-21009939)
chr3 (123-249)||(27480439-27480564)
chr3 (119-245)||(39282640-39282764)
chr3 (123-171)||(49359628-49359676)
[»] chr8 (31 HSPs)
chr8 (123-249)||(10555268-10555393)
chr8 (139-249)||(23854497-23854606)
chr8 (123-249)||(12876108-12876233)
chr8 (120-249)||(36695032-36695160)
chr8 (121-226)||(43643684-43643788)
chr8 (121-249)||(1204924-1205051)
chr8 (129-249)||(37970585-37970704)
chr8 (123-249)||(6098584-6098709)
chr8 (122-249)||(1150171-1150297)
chr8 (1-119)||(4953395-4953511)
chr8 (121-238)||(9864145-9864261)
chr8 (121-249)||(16222860-16222987)
chr8 (122-237)||(30654661-30654775)
chr8 (124-238)||(31933963-31934076)
chr8 (121-238)||(40862416-40862533)
chr8 (122-231)||(16446959-16447067)
chr8 (122-238)||(34952108-34952223)
chr8 (150-237)||(8803888-8803974)
chr8 (122-249)||(27082904-27083030)
chr8 (123-249)||(13307622-13307747)
chr8 (125-190)||(7891072-7891137)
chr8 (121-204)||(38643975-38644058)
chr8 (123-249)||(5300012-5300137)
chr8 (121-203)||(34894964-34895046)
chr8 (125-238)||(465843-465955)
chr8 (123-188)||(15009241-15009306)
chr8 (124-189)||(35459823-35459888)
chr8 (119-179)||(24823407-24823467)
chr8 (123-249)||(41362517-41362639)
chr8 (123-248)||(4133077-4133199)
chr8 (184-249)||(1149698-1149762)
[»] chr6 (10 HSPs)
chr6 (121-249)||(5627389-5627516)
chr6 (119-249)||(1945829-1945959)
chr6 (121-236)||(4318895-4319009)
chr6 (122-249)||(7055274-7055400)
chr6 (123-238)||(33893072-33893186)
chr6 (122-238)||(8513232-8513347)
chr6 (122-249)||(3879998-3880124)
chr6 (126-249)||(6091242-6091363)
chr6 (139-249)||(21017171-21017280)
chr6 (123-172)||(24662189-24662238)
[»] chr5 (34 HSPs)
chr5 (121-249)||(5112363-5112490)
chr5 (117-249)||(36860417-36860548)
chr5 (122-249)||(39572818-39572944)
chr5 (122-238)||(1429206-1429321)
chr5 (121-249)||(35826533-35826660)
chr5 (121-249)||(24886100-24886229)
chr5 (124-231)||(31705679-31705785)
chr5 (121-219)||(12910348-12910445)
chr5 (123-204)||(26317778-26317859)
chr5 (121-245)||(22974136-22974259)
chr5 (123-238)||(36866762-36866876)
chr5 (139-249)||(27318537-27318646)
chr5 (121-245)||(22255179-22255303)
chr5 (122-231)||(17158098-17158209)
chr5 (147-249)||(5829921-5830026)
chr5 (121-238)||(8741947-8742064)
chr5 (121-249)||(14919578-14919706)
chr5 (121-249)||(38528287-38528413)
chr5 (120-219)||(13956425-13956523)
chr5 (123-226)||(15724490-15724592)
chr5 (120-249)||(27330303-27330429)
chr5 (165-238)||(699192-699264)
chr5 (123-238)||(40133385-40133499)
chr5 (125-238)||(7208924-7209037)
chr5 (123-249)||(7693230-7693355)
chr5 (121-247)||(19119857-19119982)
chr5 (123-249)||(23116272-23116397)
chr5 (120-249)||(30969374-30969502)
chr5 (122-249)||(9200232-9200358)
chr5 (123-189)||(16004485-16004552)
chr5 (165-204)||(22255617-22255656)
chr5 (166-204)||(5748478-5748516)
chr5 (123-204)||(14409420-14409501)
chr5 (149-249)||(22980819-22980918)
[»] chr2 (25 HSPs)
chr2 (123-249)||(33551064-33551189)
chr2 (123-237)||(35958909-35959022)
chr2 (123-249)||(37905709-37905833)
chr2 (121-249)||(19289401-19289523)
chr2 (119-249)||(4166918-4167047)
chr2 (120-249)||(29242216-29242344)
chr2 (125-249)||(33660446-33660569)
chr2 (156-249)||(43648323-43648415)
chr2 (122-249)||(11366459-11366585)
chr2 (123-246)||(26357577-26357699)
chr2 (125-249)||(3176941-3177064)
chr2 (122-231)||(17054192-17054300)
chr2 (121-249)||(2325448-2325575)
chr2 (121-249)||(39167441-39167568)
chr2 (123-253)||(4763628-4763760)
chr2 (122-249)||(17071815-17071941)
chr2 (155-238)||(27350027-27350109)
chr2 (149-249)||(33902094-33902191)
chr2 (120-249)||(36641983-36642111)
chr2 (122-238)||(4264166-4264281)
chr2 (121-204)||(18494390-18494473)
chr2 (120-171)||(34441921-34441972)
chr2 (120-187)||(41960880-41960947)
chr2 (123-236)||(44913662-44913774)
chr2 (125-249)||(41463928-41464051)
[»] scaffold0291 (1 HSPs)
scaffold0291 (149-249)||(7913-8012)
[»] scaffold0002 (1 HSPs)
scaffold0002 (122-249)||(133-259)
[»] scaffold0022 (1 HSPs)
scaffold0022 (149-237)||(146088-146175)
[»] scaffold0061 (1 HSPs)
scaffold0061 (152-249)||(43986-44082)
[»] scaffold0017 (1 HSPs)
scaffold0017 (152-249)||(154705-154801)
[»] scaffold0009 (1 HSPs)
scaffold0009 (121-188)||(100819-100886)


Alignment Details
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 10481457 - 10481694
Alignment:
Q  1 cttcatgcggtcatctatcataaggaattattggttctaagagttttctatttttaaaattgtatatgaaattgggtaaggaccccaagataccacaact 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||  ||||||| ||||  ||||||    
T  10481457 cttcatgccgtcatctatcataaggaattattggttctaagagttttttattttcaaaattgtttatgaaattgggtagagaccccaggata-aacaact 10481555  T
Q  101 cttctataggattgacacataaggaaaattctatcgtaaagtcaggaaaatgac-ttttttagttaagttaacactataacataaaaaatataatgagta 199  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |||| |||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  10481556 cttctgtaggattgacacataaggaaaattctatggtaaagttaggagaatgactttttttaatgaagttaacactataacataaaaaatataatgagta 10481655  T
Q  200 acaccactactgtttgtacaatgacattaaaaattcagt 238  Q
    ||||| | ||||||||||||||||||| |||||||||||    
T  10481656 acacccccactgtttgtacaatgacatcaaaaattcagt 10481694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 17842775 - 17842665
Alignment:
Q  120 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    ||||||||||||||| || ||||||  |||||||||||||| || ||||||||||||||||||||||||| |||||||||||||| | || |||||||||    
T  17842775 taaggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacc-ccaccgtttgtaca 17842677  T
Q  220 atgacattaaaa 231  Q
    ||||||| ||||    
T  17842676 atgacatcaaaa 17842665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 123 - 238
Target Start/End: Original strand, 37109847 - 37109961
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || ||||||  |||||||||||||| || ||||||||||||||||||||||||| |||||||||||||| | || ||||||||||||    
T  37109847 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacc-ccaccgtttgtacaatg 37109945  T
Q  223 acattaaaaattcagt 238  Q
    |||| |||| ||||||    
T  37109946 acatcaaaagttcagt 37109961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 7334769 - 7334894
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||  || |||||  || ||||||||||||  | |||||||||||||||||||||| || |||||||||||||| | |||||||||||||||    
T  7334769 ggaaaattctacggtgaagtcgtgagaatgacttttttgatgaagttaacactataacataaaatatgtaatgagtaacacc-ccactgtttgtacaatg 7334867  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| |||||||||||||||||    
T  7334868 acatcaaaagttcagttctcatagtat 7334894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 249
Target Start/End: Original strand, 18797301 - 18797427
Alignment:
Q  120 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    ||||||||||||||| || |||||| || |||||||||||| || ||||||||||  ||||||||||||| |||||||||||||| | ||||||||||||    
T  18797301 taaggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacac--taacataaaaaatgtaatgagtaacacc-ccactgtttgtaca 18797397  T
Q  220 atgacattaaaaattcagttctcatagtat 249  Q
    ||||||| |||| |||| | ||||||||||    
T  18797398 atgacatcaaaagttcaatcctcatagtat 18797427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 124 - 249
Target Start/End: Original strand, 38258521 - 38258645
Alignment:
Q  124 gaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 223  Q
    ||||||||||  || ||||||  ||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||    
T  38258521 gaaaattctacggtgaagtcataaaaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccac-accgtttgtacaatga 38258619  T
Q  224 cattaaaaattcagttctcatagtat 249  Q
    ||| |||| |||| | ||||||||||    
T  38258620 catcaaaagttcaatcctcatagtat 38258645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 32821241 - 32821114
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || |||||| |||||||| |||||| || ||||||||| |||||||| |||||| || ||||||||| ||| |||||||||||||    
T  32821241 aaggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaacaatataacatcaaaaatgtagtgagtaaca-caccactgtttgtacaa 32821143  T
Q  221 tgacattaaaaattcagttctcatagtat 249  Q
    || ||| |||| |||||| ||| ||||||    
T  32821142 tggcatcaaaagttcagtcctcgtagtat 32821114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 247
Target Start/End: Original strand, 38053493 - 38053584
Alignment:
Q  155 ttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagt 247  Q
    |||||| || ||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||||||||||| |||| |||||||||||||||    
T  38053493 ttttttggtgaagttaatactataacataaaaaatgtaatgagtaaaacc-ctactgtttgtacaatgacatcaaaagttcagttctcatagt 38053584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 27283719 - 27283844
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||| |  ||||||| |||||| || |||||||||||||||||| |||||| |||||||||||||| | || ||||||||||||    
T  27283719 ggaaaattctatggtgaagttataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ccaccgtttgtacaatg 27283817  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    | || |||| |||||| ||||||||||    
T  27283818 aaatcaaaagttcagtcctcatagtat 27283844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 37346997 - 37347122
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||| ||| || |||||| |||||||| |||||| || ||||||| |||||| ||| ||||||||||||||||||||| | | |||||||||| ||    
T  37346997 ggaaaattttatggtgaagtcatgaaaatgatttttttggtgaagttaatactataccatcaaaaatataatgagtaacacc-ccattgtttgtacagtg 37347095  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| |||||| ||||||||||    
T  37347096 acatcaaaagttcagtcctcatagtat 37347122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 249
Target Start/End: Original strand, 24211717 - 24211841
Alignment:
Q  124 gaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 223  Q
    ||||||||||| || ||||||  | |||||||||||| || |||||||||||||||||| |||||| |||||||||||||| ||||||||| || ||||     
T  24211717 gaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ctactgtttatagaatgg 24211815  T
Q  224 cattaaaaattcagttctcatagtat 249  Q
    ||| |||| |||||  ||||||||||    
T  24211816 catcaaaagttcagccctcatagtat 24211841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 249
Target Start/End: Original strand, 30055499 - 30055627
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagtt-aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    |||||||||||||| || ||||||  | |||||||||||| | | ||||||||||||||| || |||| | |||||||||||||| | ||||||||||||    
T  30055499 aaggaaaattctatggtgaagtcataagaatgactttttttgatgaagttaacactataatatcaaaattgtaatgagtaacacccc-actgtttgtaca 30055597  T
Q  220 atgacattaaaaattcagttctcatagtat 249  Q
    ||||||| |||| |||||| ||||||||||    
T  30055598 atgacatcaaaagttcagtcctcatagtat 30055627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 44413564 - 44413484
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgactttttt-agttaagttaacactataacataaaaaatataatgagtaacacc 204  Q
    |||||||||| ||||||||| ||||||||||||||| | | |||||||||||||||||| ||||||||| |||||||||||    
T  44413564 aaaattctatggtaaagtcatgaaaatgactttttttaatgaagttaacactataacatcaaaaatatagtgagtaacacc 44413484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 5657667 - 5657542
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||||| || |||||||||| |||| |||||||||||||||||| |||| | |  ||||||||||| | |||||||||||| ||    
T  5657667 ggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaacactataacatcaaaagtgttgtgagtaacacc-ccactgtttgtacagtg 5657569  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
     ||| |||| ||||||  |||||||||    
T  5657568 gcatcaaaagttcagtcttcatagtat 5657542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 238
Target Start/End: Original strand, 43686015 - 43686129
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || |||||| ||||||||||||||  || ||||||||||||||| || |||||| |  ||||||||||  | ||||||||||||||    
T  43686015 aggaaaattctatggtgaagtcacgaaaatgactttttgggtgaagttaacactataatatcaaaaatgttgtgagtaacac--ccactgtttgtacaat 43686112  T
Q  222 gacattaaaaattcagt 238  Q
    | ||| |||| ||||||    
T  43686113 ggcatcaaaagttcagt 43686129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 4582894 - 4583019
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||||| ||||||||||||| | || ||||||| ||||||  || |||||| |  ||||||||||| | ||| |||||||||||    
T  4582894 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaatactatagtatcaaaaatgttgtgagtaacacc-ccactatttgtacaatg 4582992  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| |||||| | ||||||||    
T  4582993 acatcaaaagttcagtccccatagtat 4583019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 249
Target Start/End: Original strand, 11071182 - 11071306
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatg-acttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 223  Q
    |||||||||| || |||||| ||||||| | |||||| || ||||||  |||||| ||| |||||||||  |||||||||  | |||||||||||| |||    
T  11071182 aaaattctatggtgaagtcatgaaaatgtatttttttggtaaagttagtactatatcatcaaaaatatagcgagtaacactcc-actgtttgtacagtga 11071280  T
Q  224 cattaaaaattcagttctcatagtat 249  Q
    ||| |||| |||||||||||||||||    
T  11071281 catcaaaagttcagttctcatagtat 11071306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 236
Target Start/End: Original strand, 23111167 - 23111277
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 224  Q
    |||||||| | || |||||| |||||||| |||| | || |||||||||||||||||| ||||||||  ||||||||| ||| ||| ||||||||||| |    
T  23111167 aaaattctgtggtgaagtcatgaaaatgatttttctggtgaagttaacactataacatcaaaaatattgtgagtaaca-caccactatttgtacaatggc 23111265  T
Q  225 attaaaaattca 236  Q
    || |||| ||||    
T  23111266 atcaaaagttca 23111277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 31520893 - 31520795
Alignment:
Q  139 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 238  Q
    |||||| ||||||||||||||| || ||||||| |||||| ||| ||||||||| ||||||||| | | | |||||||||| |||||| |||| ||||||    
T  31520893 aagtcatgaaaatgacttttttggtgaagttaatactataccatcaaaaatatagtgagtaaca-ctccattgtttgtacagtgacatcaaaagttcagt 31520795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 204
Target Start/End: Complemental strand, 31579256 - 31579174
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 204  Q
    ||||||||||||| || ||||||  | ||| | |||||| || |||||||||||||||||| |||||| ||||||||||||||    
T  31579256 aggaaaattctatggtgaagtcataagaataatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc 31579174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 27421563 - 27421451
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 224  Q
    |||||||||| || |||||  || ||||| |||||| || |||||||||||||||||| |||| | |  ||||||||| | | |||||||||||||||||    
T  27421563 aaaattctatggtgaagtcgtgataatgatttttttggtgaagttaacactataacatcaaaagtgttgtgagtaaca-ctccactgtttgtacaatgac 27421465  T
Q  225 attaaaaattcagt 238  Q
    || |||| ||||||    
T  27421464 atcaaaagttcagt 27421451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 245
Target Start/End: Complemental strand, 9356014 - 9355891
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||| ||| || |||||| || ||||||  |||| || || ||||||||||| |||||||||| || |||| || ||| | ||||||||||||     
T  9356014 aaggaaaattttatggtgaagtcatgagaatgaccattttggtgaatttaacactatagcataaaaaatgtagtgagcaatacc-ccactgtttgtacag 9355916  T
Q  221 tgacattaaaaattcagttctcata 245  Q
    |||||| |||| || ||||||||||    
T  9355915 tgacatcaaaagtttagttctcata 9355891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 231
Target Start/End: Complemental strand, 12390818 - 12390709
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || ||||||  | |  ||||||||| || |||||||||||||||||| |||| | |||||||||||| | | ||||||||| ||     
T  12390818 aaggaaaattctatggtgaagtcatcagatcgacttttttggtgaagttaacactataacatcaaaagtgtaatgagtaacatc-ccactgtttgtgcag 12390720  T
Q  221 tgacattaaaa 231  Q
    |||||| ||||    
T  12390719 tgacatcaaaa 12390709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 26524516 - 26524447
Alignment:
Q  120 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaat 189  Q
    ||||||||||||||| || |||||| || |||||||||| | || | |||||||||||||||| ||||||    
T  26524516 taaggaaaattctatggtgaagtcatgagaatgacttttctggtgatgttaacactataacatcaaaaat 26524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 8861260 - 8861385
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||||| || |||||||||| | |  |||||||||||||| ||| |||| | | |||| ||||||| | |||||||||||| ||    
T  8861260 ggaaaattctatggtgaagtcatgagaatgacttttctcgcgaagttaacactatagcatcaaaagtgttatgaataacacc-ccactgtttgtacagtg 8861358  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
     ||| |||| || ||| | ||||||||    
T  8861359 gcatcaaaagttaagtccccatagtat 8861385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 34362334 - 34362210
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || || | | || |||||||||| |||  |||||||||||||| ||| |||| | |  ||||||||||| | |||||||||||| ||    
T  34362334 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgagtaacacc-ccactgtttgtacagtg 34362236  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
     || | ||| |||||||||||||||||    
T  34362235 gca-tcaaagttcagttctcatagtat 34362210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 8299192 - 8299245
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactata 178  Q
    |||||||||| || |||||| ||||||||||||| | || ||||||||||||||    
T  8299192 aaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactata 8299245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 29173599 - 29173640
Alignment:
Q  208 actgtttgtacaatgacattaaaaattcagttctcatagtat 249  Q
    ||||||||||||||||||| |||| |||||| ||||||||||    
T  29173599 actgtttgtacaatgacatcaaaagttcagtcctcatagtat 29173640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 5e-31; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 125 - 249
Target Start/End: Original strand, 15752027 - 15752150
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 224  Q
    |||||||||| || |||||| || |||||||||||| || |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| |    
T  15752027 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatatagtgagtaacacctc-actgtttgtacaatggc 15752125  T
Q  225 attaaaaattcagttctcatagtat 249  Q
    || |||| |||||| ||||||||||    
T  15752126 atcaaaagttcagtcctcatagtat 15752150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 245
Target Start/End: Original strand, 18422646 - 18422768
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || ||||||  |||||||||||||| || |||||||||||||||||| |||||||||| |||||||||| | || |||||||||||    
T  18422646 aggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacacc-ccaccgtttgtacaat 18422744  T
Q  222 gacattaaaaattcagttctcata 245  Q
    ||||| |||| |||||| ||||||    
T  18422745 gacatcaaaagttcagtcctcata 18422768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 250
Target Start/End: Complemental strand, 37619078 - 37618948
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacac-cactactgtttgtaca 219  Q
    |||||||||||||| || |||| |  | |||||||||||| || |||||||||||||||||| |||||| |||||||||| || | | |||||||||| |    
T  37619078 aaggaaaattctatggtgaagttataagaatgacttttttggtgaagttaacactataacatcaaaaatttaatgagtaaaacaccccactgtttgtaaa 37618979  T
Q  220 atgacattaaaaattcagttctcatagtata 250  Q
    ||||||| |||| ||||||||||||||||||    
T  37618978 atgacatcaaaagttcagttctcatagtata 37618948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 249
Target Start/End: Original strand, 8222124 - 8222249
Alignment:
Q  120 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    ||||||||||||||  || ||||||  |||||||| |||||||| |||||||||||||||||| |||||| |||||||||||||||| || ||   ||||    
T  8222124 taaggaaaattctacggtgaagtcataaaaatgacctttttagtgaagttaacactataacatcaaaaatgtaatgagtaacaccac-accgt---taca 8222219  T
Q  220 atgacattaaaaattcagttctcatagtat 249  Q
    ||| ||| |||| |||||||||||||||||    
T  8222220 atggcatcaaaagttcagttctcatagtat 8222249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 249
Target Start/End: Complemental strand, 10182189 - 10182063
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || |||||| ||||||||||||||| || ||||||| ||| |||||||||||||||| || |||||| | | |||||||||||| |    
T  10182189 aggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactgtaacataaaaaatatagtgcgtaaca-cgccactgtttgtacagt 10182091  T
Q  222 gacattaaaaattcagttctcatagtat 249  Q
    | ||| |||| |||||| ||||||||||    
T  10182090 ggcatcaaaagttcagtcctcatagtat 10182063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 249
Target Start/End: Complemental strand, 28564938 - 28564836
Alignment:
Q  146 gaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcata 245  Q
    |||||||| ||||||  | |||||||||||||||||| |||||| ||||||||||||||  |||||||||||||||||||| |||| |||||| ||||||    
T  28564938 gaaaatgatttttttgatgaagttaacactataacatcaaaaatgtaatgagtaacacc-ttactgtttgtacaatgacatcaaaagttcagtcctcata 28564840  T
Q  246 gtat 249  Q
    ||||    
T  28564839 gtat 28564836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 249
Target Start/End: Original strand, 10922719 - 10922848
Alignment:
Q  119 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 218  Q
    |||| ||||||| ||| || || ||| || ||||| |||||| || ||||||||||||||||||||||||| |||||||||| ||| | |||||||||||    
T  10922719 ataacgaaaattttatggtgaaatcatgagaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaagacc-ccactgtttgtac 10922817  T
Q  219 aatgacattaaaaattcagttctcatagtat 249  Q
    |||||||| |||| |||| | ||||||||||    
T  10922818 aatgacatcaaaagttcaatcctcatagtat 10922848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 259
Target Start/End: Original strand, 32267028 - 32267165
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||| ||| || ||||||  | |||||||||||| || ||||||||| |||||||| |||||| |||||||||||||| | |||||||||||||    
T  32267028 aaggaaaattttatggtgaagtcataagaatgactttttttgtgaagttaacaatataacatcaaaaatgtaatgagtaacacc-ccactgtttgtacaa 32267126  T
Q  221 tgacattaaaaattcagttctcatagtataatctaccca 259  Q
    |||||| |||| |||| | |||||| ||| ||| |||||    
T  32267127 tgacatcaaaagttcactcctcatattatcatcaaccca 32267165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 249
Target Start/End: Original strand, 1547281 - 1547408
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || |||||| || |||||||||| | || ||||||||||||||||||||||||| |  ||||||||| | | ||||||||| ||     
T  1547281 aaggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgttgtgagtaaca-ctccactgtttgtgcag 1547379  T
Q  221 tgacattaaaaattcagttctcatagtat 249  Q
    || ||| |||| |||||||||||||||||    
T  1547380 tggcatcaaaagttcagttctcatagtat 1547408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 37451306 - 37451396
Alignment:
Q  147 aaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 238  Q
    |||||||||||||| || |||||||||||||||||| |||||| |||| ||||||||| |||| |||||||||||||||| |||| ||||||    
T  37451306 aaaatgacttttttggtaaagttaacactataacatcaaaaatgtaataagtaacacc-ctaccgtttgtacaatgacatcaaaagttcagt 37451396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 51128884 - 51128969
Alignment:
Q  152 gacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 238  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||| | | || |||||||||||||||| |||| ||||||    
T  51128884 gacttttttagtgaagttaacactataacataaaaaatgtaatgagtaaca-ctccaccgtttgtacaatgacatcaaaagttcagt 51128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 23999343 - 23999468
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||| ||| || ||||||  | ||||| |||||| || |||||||||||| |||||||||||||||| |||||||||| | ||| |||||| ||||    
T  23999343 ggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactacaacataaaaaatataacgagtaacacc-ccactatttgtagaatg 23999441  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| |||||  ||||||||||    
T  23999442 acatcaaaagttcagccctcatagtat 23999468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 30327132 - 30327007
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || ||||||  |||||||||||||| || || ||||||||||||||| |||||| |||||||||| ||| | || |||||||||||     
T  30327132 ggaaaattctatagtgaagtcataaaaatgactttttttgtgaatttaacactataacatcaaaaatgtaatgagtaatacc-caaccgtttgtacaata 30327034  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
     ||| |||| ||||||  |||||||||    
T  30327033 gcatcaaaagttcagtcatcatagtat 30327007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 42721035 - 42721160
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||||| |||||||| |||||| || |||||| | ||||| ||||||||||||| ||||||||||| | |||||||||||| |     
T  42721035 ggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttagccctatatcataaaaaatatagtgagtaacacc-ccactgtttgtacagta 42721133  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| |||| | | ||||||||    
T  42721134 acatcaaaagttcaatccccatagtat 42721160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 2959743 - 2959867
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || |||||| ||||||||||||| |  | |||||||||||||||||| |||| | || | ||||||| | | |||||||||||| |    
T  2959743 aggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtaagtaacatc-ccactgtttgtacagt 2959841  T
Q  222 gacattaaaaattcagttctcatagt 247  Q
    ||||| |||| |||||| ||||||||    
T  2959842 gacatcaaaagttcagtcctcatagt 2959867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 15382927 - 15383043
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || |||| |  |||||||||||||| || || ||||||||||||||| |||||| |||||||||||| | | || ||||||||||    
T  15382927 aaggaaaattctatggtgaagttataaaaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatc-ccaccgtttgtacaa 15383025  T
Q  221 tgacattaaaaattcagt 238  Q
    || ||| |||| ||||||    
T  15383026 tgtcatcaaaagttcagt 15383043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 249
Target Start/End: Complemental strand, 19899950 - 19899824
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || ||||||  | ||||| |||||| || |||||||||||||||||| |||||| ||| |||||||||| | |||||||||| |||    
T  19899950 aggaaaattctatggtgaagtcataataatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacacctc-actgtttgtagaat 19899852  T
Q  222 gacattaaaaattcagttctcatagtat 249  Q
    | ||| |||| ||||   ||||||||||    
T  19899851 ggcatcaaaagttcaaccctcatagtat 19899824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 249
Target Start/End: Original strand, 30254419 - 30254544
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || |||| |  | ||||||||||||  | ||||||||| |||||||| |||||| |||||||||| | ||| ||||||||||||||    
T  30254419 aggaaaattctatggtgaagttataagaatgacttttttgttgaagttaacaatataacatcaaaaatgtaatgagtaata-cac-actgtttgtacaat 30254516  T
Q  222 gacattaaaaattcagttctcatagtat 249  Q
    ||||| |||| |||||| |||| |||||    
T  30254517 gacatcaaaagttcagtcctcaaagtat 30254544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 249
Target Start/End: Complemental strand, 238690 - 238568
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 224  Q
    |||||||||| || |||||| |||||| |||||||| || ||||||||||||||  || |||||| |  |||||||||   | |||||||||||||||||    
T  238690 aaaattctatagtgaagtcacgaaaataacttttttggtgaagttaacactatagtattaaaaatgttgtgagtaaca--tccactgtttgtacaatgac 238593  T
Q  225 attaaaaattcagttctcatagtat 249  Q
    || |||| |||||| | ||||||||    
T  238592 atcaaaagttcagtccccatagtat 238568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 249
Target Start/End: Original strand, 28769651 - 28769773
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 224  Q
    |||||||||| || ||||||  ||||| |||||||| || ||||||||||||| |||| |||||| |||||||||||||  | || |||||||||||| |    
T  28769651 aaaattctatggtgaagtcataaaaataactttttttgtgaagttaacactatgacatcaaaaatgtaatgagtaacac--ccaccgtttgtacaatggc 28769748  T
Q  225 attaaaaattcagttctcatagtat 249  Q
    || |||  ||| || ||||||||||    
T  28769749 atcaaaggttcggtcctcatagtat 28769773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 30254853 - 30254952
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || ||||||  | ||||||||||||  | |||||||||||||||||| |||||| |||||  ||||||  | ||||||||||||||    
T  30254853 aggaaaattctatggtgaagtcataataatgacttttttgatgaagttaacactataacatcaaaaatgtaatggataacac--ccactgtttgtacaat 30254950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 3309144 - 3309225
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 204  Q
    |||||||||||| ||||||||| || |||||||||| | || |||||||||||||||||| |||| | |  |||||||||||    
T  3309144 ggaaaattctatggtaaagtcatgagaatgacttttctggtaaagttaacactataacatcaaaagtgttgtgagtaacacc 3309225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 27564053 - 27563969
Alignment:
Q  155 ttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttc 240  Q
    ||||||||| |||||||||||||||| | ||||||||| ||||||||| | | |||||||||| | |||||| |||| ||||||||    
T  27564053 ttttttagtgaagttaacactataactttaaaaatatagtgagtaaca-ctccactgtttgtatagtgacatcaaaagttcagttc 27563969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 32216093 - 32216176
Alignment:
Q  165 aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtat 249  Q
    |||||||||||||||||| |||||| || ||||||||| ||| ||||||||||||||| | | |||| |||||| ||| ||||||    
T  32216093 aagttaacactataacatcaaaaatgtagtgagtaaca-caccactgtttgtacaatggcgtcaaaagttcagtcctcgtagtat 32216176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 27763458 - 27763366
Alignment:
Q  155 ttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtat 249  Q
    |||||| || |||||||||||||||||| |||||| ||||||||||||||  ||  ||||||| |||||||| |||| | |||  ||||||||||    
T  27763458 tttttttgtgaagttaacactataacatcaaaaatgtaatgagtaacacccata--gtttgtagaatgacatcaaaagtccagccctcatagtat 27763366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 9903211 - 9903122
Alignment:
Q  146 gaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattca 236  Q
    |||||||||||||||  | |||||||||||||||||| |||| | || ||||||||||| |  ||||||||||| |||||| |||| ||||    
T  9903211 gaaaatgacttttttgatgaagttaacactataacatcaaaactgtagtgagtaacacc-ccgctgtttgtacagtgacatcaaaagttca 9903122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 22170748 - 22170814
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaa 187  Q
    |||||||||||||| || || ||| ||||||||||||| || | |||||||||||||||||| ||||    
T  22170748 aaggaaaattctatggtgaaatcatgaaaatgacttttctaatgaagttaacactataacatcaaaa 22170814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 46931439 - 46931520
Alignment:
Q  155 ttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcag 237  Q
    |||||| || |||||||||||||||||| |||||| |||||||||| ||| | |||||||||| || | ||| ||||||||||    
T  46931439 tttttttgtgaagttaacactataacatcaaaaatgtaatgagtaatacc-ccactgtttgtagaacggcatcaaaaattcag 46931520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 7079254 - 7079173
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 204  Q
    |||||||| ||| ||||||||| || |||||||||||| || ||||||||||||||| || |||| | |  |||||||||||    
T  7079254 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaacactataatatcaaaagtgttgtgagtaacacc 7079173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 48620631 - 48620747
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    ||||||||||||||  | |||| |  |||||||||||| | || ||||||||| |||||||| |||| | |  ||||||||||| | ||||||||||||     
T  48620631 aaggaaaattctatgttgaagttattaaaatgacttttcttgtgaagttaacaatataacatcaaaagtgttgtgagtaacacc-ccactgtttgtacag 48620729  T
Q  221 tgacattaaaaattcagt 238  Q
    |||||| |||| ||||||    
T  48620730 tgacatcaaaagttcagt 48620747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 16415639 - 16415755
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||  || |||||| || |||||||||| | || |||||||||||||| ||| |||| | || |||||||||||   | ||||||||||     
T  16415639 aaggaaaattctaaggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccctaaatgtttgtacag 16415738  T
Q  221 tgacattaaaaattcag 237  Q
    || ||| |||| |||||    
T  16415739 tggcatcaaaagttcag 16415755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 38823210 - 38823274
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaa 187  Q
    |||||||||||| || |||||| || |||||||||| | ||||||||||||||||| ||| ||||    
T  38823210 ggaaaattctatggtgaagtcatgagaatgacttttctggttaagttaacactatagcatcaaaa 38823274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 34012559 - 34012477
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacac 203  Q
    |||||||||||||| || |||||| ||||||||| ||| |  | |||||||||||||||||| || | | || ||||||||||    
T  34012559 aaggaaaattctatggtgaagtcatgaaaatgacgtttatgatgaagttaacactataacatcaacactgtagtgagtaacac 34012477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 3534926 - 3535042
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    ||||||||||||||  | ||||||  | ||| | |||| |||| |||||||||||||||||| |||| | |  |||||||||||  |||||||||| ||     
T  3534926 aaggaaaattctattatgaagtcattagaattaattttctagtgaagttaacactataacatcaaaagtgttgtgagtaacacc-ttactgtttgtgcag 3535024  T
Q  221 tgacattaaaaattcagt 238  Q
    |||||| |||| ||||||    
T  3535025 tgacatcaaaagttcagt 3535042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 11742532 - 11742416
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||| |||||| |||| | || |||||||||| | || ||||||||||||||  || |||| | |  | ||||||||| | ||||||||||||     
T  11742532 aaggaaaattttatcgtgaagttatgagaatgacttttctggtgaagttaacactatattatcaaaagtgttgtaagtaacacc-ccactgtttgtacag 11742434  T
Q  221 tgacattaaaaattcagt 238  Q
    |||||| |||| ||||||    
T  11742433 tgacatcaaaagttcagt 11742416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 27267361 - 27267265
Alignment:
Q  139 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 238  Q
    |||||| || ||||| |||||| || ||||||||||||   |||||||||| || ||||| ||||| | |||||||||||| || |||||||| ||||||    
T  27267361 aagtcatgagaatgatttttttggtgaagttaacactag--cataaaaaatgtagtgagtgacacccc-actgtttgtacagtggcattaaaagttcagt 27267265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 34361704 - 34361589
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || ||||||  | |||||||||||| || ||||||||||||||||||||||||| |||||||||||||| | |||||||||| ||    
T  34361704 aaggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacc-ccactgtttgtagaa 34361606  T
Q  221 tgacattaaaaattcag 237  Q
    ||||||||||| |||||    
T  34361605 tgacattaaaagttcag 34361589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 121 - 242
Target Start/End: Original strand, 50697240 - 50697360
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||  || ||||||  ||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||| |||| ||||||||||    
T  50697240 aaggaaaattctacggtgaagtcataaaaatgatttttttagtgaagtaaacactataacataaaaaatataacgagtaacacc-ctaccgtttgtacaa 50697338  T
Q  221 tgacattaaaaattcagttctc 242  Q
    |||||| |||| |||| |||||    
T  50697339 tgacatcaaaagttcaattctc 50697360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 4396324 - 4396407
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 204  Q
    |||||||||||||| || ||||||  ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  4396324 aaggaaaattctatagtgaagtcataaaaatgacttttttagtgaagttaacactataacataaaaaatgtaatgagtaacacc 4396407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 25184112 - 25184215
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || |||||| || ||||||| |||| || |||||||||||||||||| |||||| |||||||||||| | ||||||||||||||||    
T  25184112 aggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaaca-ctctactgtttgtacaat 25184210  T
Q  222 gacat 226  Q
    |||||    
T  25184211 gacat 25184215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 25701270 - 25701143
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||| ||| || |||||| || |||||||||||| || ||||||||| |||||||| |||| | || ||||||||||| ||||||||||||||     
T  25701270 aaggaaaattttatggtgaagtcatgataatgacttttttggtaaagttaacattataacatcaaaagtgtagtgagtaacacc-ctactgtttgtacag 25701172  T
Q  221 tgacattaaaaattcagttctcatagtat 249  Q
    |||||| |||| |||||| ||||||||||    
T  25701171 tgacatcaaaagttcagtcctcatagtat 25701143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 249
Target Start/End: Complemental strand, 55478110 - 55477977
Alignment:
Q  119 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaaca--ccact-actgtttg 215  Q
    |||||||||||||||| || |||||| || ||||| |||||| || |||||||||||||||||| |||||| ||| ||||||||  |||||   ||||||    
T  55478110 ataaggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacactccactgtttgtttg 55478011  T
Q  216 tacaatgacattaaaaattcagttctcatagtat 249  Q
    ||||||||||| |||| |||||| ||||||||||    
T  55478010 tacaatgacatcaaaagttcagtcctcatagtat 55477977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 3042609 - 3042725
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || || |||  ||||||| |||||| || ||||||||||||||||||| ||||| |||||||||| ||| | || |||| |||||    
T  3042609 aaggaaaattctatggtgaaatcataaaaatgatttttttggtgaagttaacactataacatacaaaatgtaatgagtaatacc-ccaccgtttatacaa 3042707  T
Q  221 tgacattaaaaattcagt 238  Q
    |||||| |||||||||||    
T  3042708 tgacatcaaaaattcagt 3042725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 32912793 - 32912678
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || ||||||  | |||||||||||| || |||||||||||||||||| |||||| |||||||||||||| ||| | |||||| ||    
T  32912793 aaggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ctagtatttgtagaa 32912695  T
Q  221 tgacattaaaaattcag 237  Q
    ||| || |||| |||||    
T  32912694 tgatatcaaaagttcag 32912678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 249
Target Start/End: Complemental strand, 36493897 - 36493774
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 224  Q
    |||||||||| || |||||| |||||| |||||||| || ||||||| |||||| ||| ||||||||| ||||||||||| | | |||||||||| ||||    
T  36493897 aaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacacc-ccattgtttgtacagtgac 36493799  T
Q  225 attaaaaattcagttctcatagtat 249  Q
    || |||| |||||| | ||||||||    
T  36493798 atcaaaagttcagtccccatagtat 36493774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 249
Target Start/End: Complemental strand, 37663951 - 37663827
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || ||||||  | ||||||||||||  | ||||||||||||  |||| |||| | |||||||||||||| | ||||||||||||||    
T  37663951 aggaaaattctatggtgaagtcataagaatgacttttttgatgaagttaacacta--acattaaaactgtaatgagtaacacccc-actgtttgtacaat 37663855  T
Q  222 gacattaaaaattcagttctcatagtat 249  Q
    ||||| |||| |||||| ||||||||||    
T  37663854 gacatcaaaagttcagtcctcatagtat 37663827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 19089664 - 19089539
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || ||||||  | ||| ||||||||  | ||||||||||||||| || |||| | |||||||||||||| | |||||||||| ||||    
T  19089664 ggaaaattctatggtgaagtcataagaataacttttttgatgaagttaacactataatatcaaaattgtaatgagtaacacc-ccactgtttgtataatg 19089566  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| |||||| ||||||||||    
T  19089565 acatcaaaagttcagtcctcatagtat 19089539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 249
Target Start/End: Original strand, 27396612 - 27396741
Alignment:
Q  119 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 218  Q
    ||||| |||||||||| || |||||| || |||||||||| | || ||||||||| |||| ||| |||| | | |||||||||||| |||||||||||||    
T  27396612 ataagaaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattatagcattaaaagtgttatgagtaacacc-ctactgtttgtac 27396710  T
Q  219 aatgacattaaaaattcagttctcatagtat 249  Q
    |||||||| |||| ||  || ||||||||||    
T  27396711 aatgacatcaaaagtttcgtcctcatagtat 27396741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 219
Target Start/End: Complemental strand, 35021248 - 35021151
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    |||||||||||||| || |||||| ||||||||||||| | || ||||||||| |||||||| |||||| || ||||||||| ||| ||||||||||||    
T  35021248 aaggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacattataacatcaaaaatgtagtgagtaaca-caccactgtttgtaca 35021151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 4205114 - 4205218
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || |||||||||||||||||||| |  | ||||||||||||||| || |||||| |  ||| ||||||| | |||||||||||||    
T  4205114 aaggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttctgaataacacc-ccactgtttgtacaa 4205212  T
Q  221 tgacat 226  Q
    ||||||    
T  4205213 tgacat 4205218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 245
Target Start/End: Complemental strand, 19440860 - 19440738
Alignment:
Q  123 ggaaaattctatcgt-aaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    |||||||||||| || ||||||| || |||||||||||| || | |||||||||||||||| |||||| |||||| ||||| | | || |||||||||||    
T  19440860 ggaaaattctatggtgaaagtcatgagaatgacttttttggtgatgttaacactataacatcaaaaatgtaatgattaaca-ctccaccgtttgtacaat 19440762  T
Q  222 gacattaaaaattcagttctcata 245  Q
    | ||| |||| |||||| ||||||    
T  19440761 ggcatcaaaagttcagtcctcata 19440738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 53124311 - 53124368
Alignment:
Q  147 aaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 204  Q
    ||||||| |||||| || |||||||||||||||||| |||||||||||||||||||||    
T  53124311 aaaatgatttttttggtgaagttaacactataacatcaaaaatataatgagtaacacc 53124368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 7703517 - 7703642
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    ||||||||||||  |||||||| || |||||||||| | || |||||||||||||||||| |||| | |  | ||||||||| | |||||||||||  ||    
T  7703517 ggaaaattctatgttaaagtcatgagaatgacttttctggtgaagttaacactataacatcaaaagtgttgtcagtaacacc-ccactgtttgtacggtg 7703615  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| |||||| | ||||||||    
T  7703616 acatcaaaagttcagtccccatagtat 7703642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 249
Target Start/End: Original strand, 9139244 - 9139370
Alignment:
Q  120 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    ||||||||||||||| || |||||| |||| |||||||||| || ||||||||  |||| ||||||||  ||| ||||||||||| | || |||||||||    
T  9139244 taaggaaaattctatggtgaagtcatgaaattgacttttttggtgaagttaacgttatagcataaaaa--atagtgagtaacacc-ccaccgtttgtaca 9139340  T
Q  220 atgacattaaaaattcagttctcatagtat 249  Q
     |||||| |||| |||| | | ||||||||    
T  9139341 gtgacataaaaagttcaatccccatagtat 9139370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 879760 - 879652
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||| ||  || |||||| || ||| | |||||| || |||| ||||||||||||| |||||| |||||||||||||| | | ||||||||||||    
T  879760 aggaaaattttaaggtgaagtcatgagaataatttttttggtgaagtaaacactataacatcaaaaatgtaatgagtaacacctc-attgtttgtacaat 879662  T
Q  222 gacattaaaa 231  Q
    ||||| ||||    
T  879661 gacatcaaaa 879652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 29584411 - 29584286
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || |||||  |  |||||||||| | || |||||||||||||||||| |||| | |  ||||||||||| | |||||||||||||    
T  29584411 aaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgt--tgagtaacacctc-actgtttgtacaa 29584315  T
Q  221 tgacattaaaaattcagttctcatagtat 249  Q
    || ||| |||| ||||||  |||||||||    
T  29584314 tggcatcaaaagttcagtcttcatagtat 29584286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 249
Target Start/End: Original strand, 47253751 - 47253873
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 224  Q
    |||||||||| || |||||| || |||||||||||| || |||||||||||||| ||| |||| | |  ||||||||||  | | ||||| |||| ||||    
T  47253751 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactatatcatcaaaagtgttgtgagtaacac--ccattgtttatacagtgac 47253848  T
Q  225 attaaaaattcagttctcatagtat 249  Q
    || |||| |||||| ||||||||||    
T  47253849 atcaaaagttcagtcctcatagtat 47253873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 7152319 - 7152236
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 204  Q
    |||||||||||||| || |||||| |  |||||||||| | || ||||||||| |||||||| |||| |||| |||||||||||    
T  7152319 aaggaaaattctatggtgaagtcatgctaatgacttttctggtaaagttaacattataacatcaaaagtatagtgagtaacacc 7152236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 236
Target Start/End: Original strand, 17167715 - 17167825
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 224  Q
    |||||||||| || |||| | ||||||||||||| |  | ||||||||| ||||| || |||||| |  ||||||||||| | |||||||||||||||||    
T  17167715 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacacc-ccactgtttgtacaatgac 17167813  T
Q  225 attaaaaattca 236  Q
    || |||| ||||    
T  17167814 atcaaaagttca 17167825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 236
Target Start/End: Original strand, 17173292 - 17173402
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 224  Q
    |||||||||| || |||| | ||||||||||||| |  | ||||||||| ||||| || |||||| |  ||||||||||| | |||||||||||||||||    
T  17173292 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacacc-ccactgtttgtacaatgac 17173390  T
Q  225 attaaaaattca 236  Q
    || |||| ||||    
T  17173391 atcaaaagttca 17173402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 238
Target Start/End: Original strand, 39397918 - 39398032
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || ||||||  | |||||||||| | || |||||||||||||||||| |||| | |  ||||||||||| | | |||||||||| ||    
T  39397918 ggaaaattctatggtgaagtcattagaatgacttttatggtgaagttaacactataacattaaaagtgttgtgagtaacacc-ccattgtttgtacagtg 39398016  T
Q  223 acattaaaaattcagt 238  Q
    |||| |||| ||||||    
T  39398017 acatcaaaagttcagt 39398032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 6864061 - 6864160
Alignment:
Q  149 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagta 248  Q
    |||||||||||| || |||||| ||||||||||| |||||| |||||| ||||| | | ||| ||||||||||  ||| |||| | |||| |||||||||    
T  6864061 aatgacttttttggtgaagttatcactataacatcaaaaatttaatgaataacatc-caactttttgtacaatagcatcaaaagtccagtcctcatagta 6864159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 245
Target Start/End: Original strand, 37287732 - 37287855
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaa-gttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    ||||||||||||| || |||| | || |||||||||||| | ||| |||||||||||||||| |||| | |  ||||||||||| | ||||||||||||     
T  37287732 aggaaaattctatggtgaagtaatgagaatgactttttttggtaaagttaacactataacatcaaaagtgttgtgagtaacacc-ccactgtttgtacag 37287830  T
Q  221 tgacattaaaaattcagttctcata 245  Q
    || ||| |||| |||| | ||||||    
T  37287831 tggcatcaaaagttcaatcctcata 37287855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 47073707 - 47073656
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaac 172  Q
    |||||||||||||| ||||||||| || |||||||||||| || ||||||||    
T  47073707 aaggaaaattctatggtaaagtcatgataatgacttttttggtgaagttaac 47073656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 46884245 - 46884179
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaat 189  Q
    |||||||||||| || ||||||  |||||||||||||| |  ||||||||||  |||||||||||||    
T  46884245 ggaaaattctatagtgaagtcataaaaatgacttttttggcgaagttaacaccgtaacataaaaaat 46884179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 249
Target Start/End: Original strand, 23761089 - 23761197
Alignment:
Q  140 agtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagtt 239  Q
    ||||| || ||||||| || | || |||||||||||||||||| |||| | |  ||||||||||| | |||||||||| | |||||| |||| ||||||     
T  23761089 agtcatgagaatgactattcttgtaaagttaacactataacatcaaaagtgttgtgagtaacacctc-actgtttgtatagtgacatcaaaagttcagtc 23761187  T
Q  240 ctcatagtat 249  Q
    | ||||||||    
T  23761188 cccatagtat 23761197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 30002837 - 30002721
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||| ||||| || ||||||  ||||||| |||| | || ||||||||||| || ||| |||| | |  ||||||||||| | ||||||||||||     
T  30002837 aaggaaaactctatggtgaagtcattaaaatgatttttctggtgaagttaacactgtagcatcaaaagtgttgtgagtaacacctc-actgtttgtacag 30002739  T
Q  221 tgacattaaaaattcagt 238  Q
    |||||| |||| ||||||    
T  30002738 tgacatcaaaagttcagt 30002721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 53337624 - 53337559
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaa 188  Q
    |||||||||||| ||||||||| || ||||| |||| |  | |||||||||||| |||||||||||    
T  53337624 ggaaaattctatggtaaagtcatgataatgatttttctgataaagttaacactaaaacataaaaaa 53337559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 17272007 - 17272075
Alignment:
Q  119 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaa 187  Q
    |||||||||||||||| || |||||  |  |||||||||| | || |||||||||||||||||| ||||    
T  17272007 ataaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaa 17272075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 245
Target Start/End: Complemental strand, 34948306 - 34948187
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 224  Q
    |||||| ||| || |||||| || |||||||||| | |  |||||||||||||||||| |||| | |  ||||||||||| | |||||||||| | || |    
T  34948306 aaaattttatggtgaagtcatgagaatgacttttctggcgaagttaacactataacatcaaaagtgttgtgagtaacacc-ccactgtttgtaaagtggc 34948208  T
Q  225 attaaaaattcagttctcata 245  Q
    || |||| |||||| ||||||    
T  34948207 atcaaaagttcagtcctcata 34948187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 5e-28; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 249
Target Start/End: Complemental strand, 3655388 - 3655262
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||| ||| || ||||||  ||||||||||||||  | ||||||||||||||||||||||||| |||||||||||||| | || |||||||||||    
T  3655388 aggaaaattttatggtgaagtcataaaaatgacttttttgataaagttaacactataacataaaaaatgtaatgagtaacacc-ccaccgtttgtacaat 3655290  T
Q  222 gacattaaaaattcagttctcatagtat 249  Q
    ||||| |||| |||||| ||||||||||    
T  3655289 gacatcaaaagttcagtcctcatagtat 3655262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 51213166 - 51213041
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||||| || |||||||||||| || ||||||||||| ||||||||||||| ||||||| |||||| | |||||||||||||||    
T  51213166 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactgtaacataaaaaatgtaatgagcaacacc-ccactgtttgtacaatg 51213068  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
     ||| |||| || ||| ||||||||||    
T  51213067 gcatcaaaagttgagtcctcatagtat 51213041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 249
Target Start/End: Original strand, 48354930 - 48355057
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || |||||| || ||||| |||| | || ||||||||||||||| || |||||| |||||||||||||| | | |||||||||||    
T  48354930 aaggaaaattctatggtgaagtcatgagaatgatttttatggtgaagttaacactataatattaaaaatgtaatgagtaacacc-ccattgtttgtacaa 48355028  T
Q  221 tgacattaaaaattcagttctcatagtat 249  Q
    || ||| |||| |||||||||||||||||    
T  48355029 tggcatcaaaagttcagttctcatagtat 48355057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 245
Target Start/End: Complemental strand, 40552445 - 40552323
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || |||||| || |||||||||||| |  |||||||||||||||||| |||||| |||||||||||| | | || |||||||||||    
T  40552445 aggaaaattctatggtgaagtcatgagaatgacttttttggagaagttaacactataacatcaaaaatgtaatgagtaaca-ctccaccgtttgtacaat 40552347  T
Q  222 gacattaaaaattcagttctcata 245  Q
    ||||| |||| |||||| ||||||    
T  40552346 gacatcaaaagttcagtcctcata 40552323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 46297945 - 46297849
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||| || |||||| ||||||||||||| | || |||||||||||||||||| ||||||||| ||||||||| ||| |||||||||||||||    
T  46297945 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacactataacatcaaaaatatagtgagtaaca-caccactgtttgtacaatg 46297849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 122 - 249
Target Start/End: Complemental strand, 26941446 - 26941320
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || ||||||  | ||||| |||||| || ||||||||||||||| || |||| |||||||||||||||| | |||||||||| |||    
T  26941446 aggaaaattctatggtgaagtcataagaatgatttttttggtgaagttaacactataaaatcaaaattataatgagtaacacc-ccactgtttgtataat 26941348  T
Q  222 gacattaaaaattcagttctcatagtat 249  Q
    ||||| |||| |||||| ||||| ||||    
T  26941347 gacatcaaaagttcagtcctcatggtat 26941320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 20373481 - 20373356
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||| ||| || ||||||  | ||||| |||||| || ||||||| |||||||||| |||||| ||| |||||||||| | |||||||||||||||    
T  20373481 ggaaaattttatagtgaagtcataagaatgatttttttggtgaagttaatactataacatcaaaaatgtaacgagtaacacccc-actgtttgtacaatg 20373383  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| |||||||||||| ||||    
T  20373382 acatcaaaagttcagttctcatggtat 20373356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 37203058 - 37203183
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || ||||||  ||||||| ||||||  | |||||||||||||||||| |||| | || ||||||||||| | |||||||||||| ||    
T  37203058 ggaaaattctatggtgaagtcataaaaatgatttttttgatgaagttaacactataacatcaaaattgtagtgagtaacacc-ccactgtttgtacagtg 37203156  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
     ||| |||| |||||| ||||||||||    
T  37203157 gcatcaaaagttcagtcctcatagtat 37203183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 34132924 - 34133040
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    ||||||||||||||  | |||||| ||||||||||||||| || || |||||||||||  || |||||| |  ||||||||||| | |||||||||||||    
T  34132924 aaggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacacc-ccactgtttgtacaa 34133022  T
Q  221 tgacattaaaaattcagt 238  Q
    |||||| |||| ||||||    
T  34133023 tgacatcaaaagttcagt 34133040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 249
Target Start/End: Original strand, 35844315 - 35844442
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || |||||| || |||||||||| | || |||||||||||||||||  |||||| |  ||||||||||| | ||||||||||||     
T  35844315 aaggaaaattctatggtgaagtcatgataatgacttttctggtgaagttaacactataacaacaaaaatgttgtgagtaacacctc-actgtttgtacag 35844413  T
Q  221 tgacattaaaaattcagttctcatagtat 249  Q
    |||||| |||| || ||| | ||||||||    
T  35844414 tgacatcaaaagtttagtccccatagtat 35844442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 4761838 - 4761709
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgactttttta--gttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 218  Q
    |||||||||||||| || || ||| || | ||||||||||   || ||||||| ||||||| || |||||| |||||||||||||  | |||||||||||    
T  4761838 aaggaaaattctatggtgaattcatgagattgacttttttttggtgaagttaatactataatatcaaaaatgtaatgagtaacacttc-actgtttgtac 4761740  T
Q  219 aatgacattaaaaattcagttctcatagtat 249  Q
    |||||||| |||| |||||| ||||||||||    
T  4761739 aatgacatcaaaagttcagtcctcatagtat 4761709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 47481546 - 47481638
Alignment:
Q  156 tttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtat 249  Q
    ||||| || |||||||||||||||||| |||||| |||||||||||||| | |||||||||| |||||||| |||| || ||  ||||||||||    
T  47481546 tttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ccactgtttgtagaatgacatcaaaagtttagccctcatagtat 47481638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 42506214 - 42506135
Alignment:
Q  169 taacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtat 249  Q
    |||||||||||||| |||| | |||||||||| ||| | ||||||||||||||||||| |||| |||||| ||||||||||    
T  42506214 taacactataacatcaaaattgtaatgagtaatacccc-actgtttgtacaatgacatcaaaagttcagtcctcatagtat 42506135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 4015451 - 4015576
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||||| || |||||||||| |  | |||||||||||||| ||| |||| | |  ||||||||||| | |||||||||| | ||    
T  4015451 ggaaaattctatggtgaagtcatgagaatgacttttctgatgaagttaacactatagcatcaaaagtgttgtgagtaacacc-caactgtttgtagagtg 4015549  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| |||||| ||||||||||    
T  4015550 acatcaaaagttcagtcctcatagtat 4015576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 11357534 - 11357424
Alignment:
Q  139 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 238  Q
    |||||| || |||||||||| | || |||||||||||||| ||| |||| |||| ||||||||||| | |||||||||||| |  ||| |||| ||||||    
T  11357534 aagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtatagtgagtaacacccccactgtttgtacagttgcatcaaaagttcagt 11357435  T
Q  239 tctcatagtat 249  Q
      |||||||||    
T  11357434 catcatagtat 11357424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 37157699 - 37157823
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||||| ||||||| |||||||  | |||||||||||||||||| |||| | || ||||||||||| | |||| ||||||| ||    
T  37157699 ggaaaattctatggtgaagtcatgaaaatggcttttttgatgaagttaacactataacatcaaaattgtagtgagtaacacc-ccactg-ttgtacagtg 37157796  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
     ||| |||| ||||||  |||||||||    
T  37157797 gcatcaaaagttcagtcatcatagtat 37157823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 29099372 - 29099448
Alignment:
Q  149 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacat 226  Q
    |||||||||| | || ||||||||||||||||||||||||| |  ||||||||||| | |||||||||||| ||||||    
T  29099372 aatgacttttctggtgaagttaacactataacataaaaaatgtcgtgagtaacacc-ccactgtttgtacagtgacat 29099448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 54505825 - 54505912
Alignment:
Q  149 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcag 237  Q
    ||||||||||||  | |||||||||||||||||| |||||| |||||||||||||| | | | ||| || |||||||| ||||||||||    
T  54505825 aatgacttttttgttgaagttaacactataacatcaaaaatgtaatgagtaacacc-ccattatttatagaatgacatcaaaaattcag 54505912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 41585449 - 41585411
Alignment:
Q  166 agttaacactataacataaaaaatataatgagtaacacc 204  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  41585449 agttaacactataacatcaaaaatataatgagtaacacc 41585411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 55343471 - 55343401
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatat 191  Q
    |||||||||||||| || |||||| ||||||||||||| |  | ||||||||||||||| || ||||||||    
T  55343471 aaggaaaattctatggtgaagtcacgaaaatgacttttctgatgaagttaacactataatatcaaaaatat 55343401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 249
Target Start/End: Complemental strand, 7327669 - 7327542
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagtt-aacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    ||||||||||||| || |||| | || ||||||||||||||| ||||| ||||||||||||| |||| | |  ||||||||| | | | | ||||||||     
T  7327669 aggaaaattctatggtgaagttatgagaatgacttttttagtgaagttaaacactataacatcaaaagtgttgtgagtaaca-ctccattatttgtacag 7327571  T
Q  221 tgacattaaaaattcagttctcatagtat 249  Q
    |||||| |||| |||||| | ||||||||    
T  7327570 tgacatcaaaagttcagtccccatagtat 7327542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 21193593 - 21193649
Alignment:
Q  119 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacact 175  Q
    |||||||||||||||| ||||||||| || |||||||||| | || |||||||||||    
T  21193593 ataaggaaaattctatggtaaagtcatgagaatgacttttctggtgaagttaacact 21193649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 54828888 - 54828805
Alignment:
Q  120 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 204  Q
    |||| |||||| ||| || ||||||  ||||| | |||||| || ||||||||||||||||||| ||||| ||||||||||||||    
T  54828888 taagaaaaattttatggtgaagtcataaaaataatttttttggtaaagttaacactataacata-aaaatgtaatgagtaacacc 54828805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 22446247 - 22446168
Alignment:
Q  126 aaattctatcgtaaagtcaggaaaatgacttttttagtt-aagttaacactataacataaaaaatataatgagtaacacc 204  Q
    ||||||||  || |||||| ||||||||||||||| | | ||||||||| |||| ||| ||||||||| |||||||||||    
T  22446247 aaattctacggtgaagtcatgaaaatgactttttttggtgaagttaacattatatcatcaaaaatatagtgagtaacacc 22446168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 21009939 - 21009874
Alignment:
Q  171 acactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcag 237  Q
    |||||||||||| |||||| |||||||||||||| | ||| |||||| |||||||| |||| |||||    
T  21009939 acactataacatcaaaaatgtaatgagtaacacc-ccactatttgtagaatgacatcaaaagttcag 21009874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 27480564 - 27480439
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    ||||||||||||  | |||||| || |||||  ||||| || |||| ||||||||||||| |||| ||||||||||| || | | | |||||||||  ||    
T  27480564 ggaaaattctatgatgaagtcatgagaatgatatttttggtaaagtcaacactataacatcaaaagtataatgagtagcatc-caattgtttgtacggtg 27480466  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| |||||| | ||||||||    
T  27480465 acatcaaaagttcagtccccatagtat 27480439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 245
Target Start/End: Original strand, 39282640 - 39282764
Alignment:
Q  119 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 218  Q
    |||||||||||||||| || |||||| |||||||| |||| |  | || ||||||||||||||| |||| | |  ||||||| ||| | ||||||| |||    
T  39282640 ataaggaaaattctatggtgaagtcatgaaaatgatttttctgataaaattaacactataacatcaaaactgt-gtgagtaatacc-ccactgtttatac 39282737  T
Q  219 aatgacattaaaaattcagttctcata 245  Q
    | || ||| |||| |||||||||||||    
T  39282738 agtggcatcaaaagttcagttctcata 39282764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 49359676 - 49359628
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaa 171  Q
    |||||||||||| || |||||| ||||||||||||||| || |||||||    
T  49359676 ggaaaattctatggtgaagtcatgaaaatgactttttttgtgaagttaa 49359628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 10555393 - 10555268
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||  || |||||| || |||||||||||| || ||||||||||||||||||||||||| |||||||||||| | | |||||||||||||||    
T  10555393 ggaaaattctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaaca-ctccactgtttgtacaatg 10555295  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| |||| | ||||||||||    
T  10555294 acatcaaaagttcaatcctcatagtat 10555268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 23854606 - 23854497
Alignment:
Q  139 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 238  Q
    |||||| || |||||||||||| || ||||||||||||||||||||||||| |||||||||||||| | ||||||||| ||||||||| |||| ||||||    
T  23854606 aagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacc-caactgtttgtgcaatgacatcaaaagttcagt 23854508  T
Q  239 tctcatagtat 249  Q
     ||||||||||    
T  23854507 cctcatagtat 23854497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 12876108 - 12876233
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||||| ||||||||||||| |  | ||||||||||||||| ||||||||| |  ||||||||||| | |||||||||||||||    
T  12876108 ggaaaattctatggttaagtcacgaaaatgacttttctgatgaagttaacactataatataaaaaatgttgtgagtaacacc-caactgtttgtacaatg 12876206  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| |||||| ||||||||||    
T  12876207 acatcaaaagttcagtcctcatagtat 12876233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 249
Target Start/End: Complemental strand, 36695160 - 36695032
Alignment:
Q  120 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    ||||||||||||||| || |||||||||||||||||||| |  | ||||||||||||||| || |||||| |  ||||||||||| | ||||||||||||    
T  36695160 taaggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttgtgagtaacacc-ccactgtttgtaca 36695062  T
Q  220 atgacattaaaaattcagttctcatagtat 249  Q
    ||||||| |||| |||||| | ||||||||    
T  36695061 atgacatcaaaagttcagtccccatagtat 36695032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 43643788 - 43643684
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || |||||| || ||||||| |||| || |||||||||||||||||| |||||| |||||||||||| | |||||||||||||||    
T  43643788 aaggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaaca-ctctactgtttgtacaa 43643690  T
Q  221 tgacat 226  Q
    ||||||    
T  43643689 tgacat 43643684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 249
Target Start/End: Original strand, 1204924 - 1205051
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||| ||  || |||||| || |||||||||| | || ||||||||||||||||||||||||| || ||||||||| ||  |||||||||||||    
T  1204924 aaggaaaattttacggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgtagtgagtaaca-catcactgtttgtacaa 1205022  T
Q  221 tgacattaaaaattcagttctcatagtat 249  Q
    |||||| |||| |||||| ||||||||||    
T  1205023 tgacatcaaaagttcagtcctcatagtat 1205051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 129 - 249
Target Start/End: Complemental strand, 37970704 - 37970585
Alignment:
Q  129 ttctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacatta 228  Q
    |||||| || |||||| || |||||||||||| || |||||||||||||||||| |||||| |||||||||||||| | ||||||||||||||| ||| |    
T  37970704 ttctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ccactgtttgtacaatgccatca 37970606  T
Q  229 aaaattcagttctcatagtat 249  Q
    ||| |||||  ||||||||||    
T  37970605 aaagttcagccctcatagtat 37970585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 6098709 - 6098584
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||||| |||||| |||||||| || ||||||| |||||| ||| ||||||||| ||||||||||| | |||||||||||| ||    
T  6098709 ggaaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactatagcatcaaaaatatagtgagtaacacc-ccactgtttgtacagtg 6098611  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| |||||| | ||||||||    
T  6098610 acatcaaaagttcagtccccatagtat 6098584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 122 - 249
Target Start/End: Complemental strand, 1150297 - 1150171
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || ||||||  | |||||||||||| || |||||||| ||||||||| |||||| |||||||||||| | | |||||||||||||     
T  1150297 aggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacgctataacatcaaaaatgtaatgagtaacatc-ccactgtttgtacaac 1150199  T
Q  222 gacattaaaaattcagttctcatagtat 249  Q
    ||||| |||| ||||||  |||||||||    
T  1150198 gacatcaaaagttcagtcatcatagtat 1150171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 4953511 - 4953395
Alignment:
Q  1 cttcatgcggtcatctatcataaggaattattggttctaagagttttctatttttaaaattgtatatgaaattgggtaaggaccccaagataccacaact 100  Q
    |||||||| ||||| ||||||||| ||||||| ||||||||||||||  ||||| |||||||  |||| || |||||| |||||||||||||  ||||||    
T  4953511 cttcatgccgtcatatatcataagaaattattagttctaagagtttttaattttcaaaattgcttatgtaa-tgggtagggaccccaagata-aacaact 4953414  T
Q  101 cttctataggattgacaca 119  Q
    ||| |||||||||||||||    
T  4953413 cttatataggattgacaca 4953395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 9864145 - 9864261
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    ||||||||||||||  | |||||| ||||||||||||||| || || |||||||||||  || |||||| |  ||||||||||| | |||||||||||||    
T  9864145 aaggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacacc-ccactgtttgtacaa 9864243  T
Q  221 tgacattaaaaattcagt 238  Q
    |||||| |||| ||||||    
T  9864244 tgacatcaaaagttcagt 9864261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 249
Target Start/End: Original strand, 16222860 - 16222987
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||  || || ||| || |||||||||| | || || ||||||||||||||||||||||||| ||||||   || | || ||||||||||    
T  16222860 aaggaaaattctacggtgaaatcatgagaatgacttttctggtgaatttaacactataacataaaaaatatagtgagtagttcc-ccacagtttgtacaa 16222958  T
Q  221 tgacattaaaaattcagttctcatagtat 249  Q
    |||||| |||| |||||| ||||||||||    
T  16222959 tgacatcaaaagttcagtcctcatagtat 16222987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 237
Target Start/End: Complemental strand, 30654775 - 30654661
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||| ||| || ||||||  | | ||| |||||| || ||||||||||||||||||||||||| |||||||||||||| | |||||||||  |||    
T  30654775 aggaaaattttatggtgaagtcataagagtgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacc-ccactgtttgttgaat 30654677  T
Q  222 gacattaaaaattcag 237  Q
    ||||| |||| |||||    
T  30654676 gacatcaaaagttcag 30654661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 238
Target Start/End: Complemental strand, 31934076 - 31933963
Alignment:
Q  124 gaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 223  Q
    |||||||||| ||| |||| | || ||||| |||||| || ||||||||||||| | || ||||||||||||||||||||| | ||| ||| ||||||||    
T  31934076 gaaaattctaacgtgaagttatgagaatgatttttttggtgaagttaacactatgatatcaaaaatataatgagtaacacc-ccactctttatacaatga 31933978  T
Q  224 cattaaaaattcagt 238  Q
    ||| |||| ||||||    
T  31933977 catcaaaagttcagt 31933963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 40862416 - 40862533
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacat-aaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    |||||||||||||| || |||||| |||||| |||||| | || ||||||||||||||| || ||||||| |  ||||||||||| | ||||||||||||    
T  40862416 aaggaaaattctatagtgaagtcacgaaaataacttttctggtgaagttaacactataatatcaaaaaatgttgtgagtaacacc-ccactgtttgtaca 40862514  T
Q  220 atgacattaaaaattcagt 238  Q
    ||| ||| |||| ||||||    
T  40862515 atggcatcaaaagttcagt 40862533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 16447067 - 16446959
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || |||||| ||||||||||||| |  | |||||||||||||||||| |||| | || ||||||||||| | |||||||||| |||    
T  16447067 aggaaaattctatggtgaagtcatgaaaatgacttttctgataaagttaacactataacatcaaaattgtagtgagtaacacc-ccactgtttgtataat 16446969  T
Q  222 gacattaaaa 231  Q
    | ||| ||||    
T  16446968 ggcatcaaaa 16446959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 238
Target Start/End: Complemental strand, 34952223 - 34952108
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| |||||||||  |||||||||||| | || |||||||||||||| ||| |||| | |  ||||||||| | | |||||||||||| |    
T  34952223 aggaaaattctatagtaaagtcattaaaatgacttttctggtcaagttaacactatatcatcaaaagtgttgtgagtaacagc-ccactgtttgtacagt 34952125  T
Q  222 gacattaaaaattcagt 238  Q
    ||||| |||| ||||||    
T  34952124 gacatcaaaagttcagt 34952108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 8803974 - 8803888
Alignment:
Q  150 atgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcag 237  Q
    ||||||||||| || |||||||||||||||||| |||||| |||||||||||| | | ||| |||||| |||||||| |||| |||||    
T  8803974 atgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaaca-ctccactatttgtagaatgacatcaaaagttcag 8803888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 249
Target Start/End: Complemental strand, 27083030 - 27082904
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || ||||||  | | |||||||| | || |||||||||||||| ||| |||| | || ||||||||||| | ||||||||| || |    
T  27083030 aggaaaattctatggtgaagtcatcagactgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacacc-ccactgtttgtgcagt 27082932  T
Q  222 gacattaaaaattcagttctcatagtat 249  Q
    | |||||||| |||||| ||||||||||    
T  27082931 ggcattaaaagttcagtcctcatagtat 27082904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 13307622 - 13307747
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||||| || ||||| |||| | || |||||||||||||||||| |||| | |  ||||||||||| | ||| |||||||| ||    
T  13307622 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacctc-actatttgtacagtg 13307720  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| |||||| | ||||||||    
T  13307721 acatcaaaagttcagtccccatagtat 13307747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 7891137 - 7891072
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaata 190  Q
    |||||||||| || |||||| || |||||||||||| || |||||||||||||||||| |||||||    
T  7891137 aaaattctatggtgaagtcatgagaatgactttttttgtgaagttaacactataacatcaaaaata 7891072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 38643975 - 38644058
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 204  Q
    |||||||||||||| || || ||| || |||||||||||| || |||||||||||||||||| |||| | |  |||||||||||    
T  38643975 aaggaaaattctatggtgaaatcatgagaatgacttttttggtcaagttaacactataacatcaaaagtgttgtgagtaacacc 38644058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 5300137 - 5300012
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||||| || ||||||||||||| | |||||||||||||| ||| |||| | |  | |||| || | |||||||||||||| ||    
T  5300137 ggaaaattctatggtgaagtcatgagaatgacttttttaatgaagttaacactatagcatcaaaagtgttgtaagtagca-ctctactgtttgtacagtg 5300039  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
     ||| |||| |||||| || |||||||    
T  5300038 gcatcaaaagttcagtccttatagtat 5300012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 34894964 - 34895046
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacac 203  Q
    |||||||||||||| || |||||| ||||||||||||| |  | |||||||||||||||||| || | | || ||||||||||    
T  34894964 aaggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaacactgtagtgagtaacac 34895046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 465843 - 465955
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 224  Q
    |||||| ||| || ||||||  |||||||||||| | || |||||||||| ||||||| |||| | |  ||||||||||| | |||||||||||| || |    
T  465843 aaaattttatggtgaagtcattaaaatgacttttgtggtgaagttaacacgataacatcaaaagtgttgtgagtaacacc-ccactgtttgtacagtggc 465941  T
Q  225 attaaaaattcagt 238  Q
    || |||||||||||    
T  465942 atcaaaaattcagt 465955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 15009241 - 15009306
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaa 188  Q
    |||||||||||| || ||||||  | |||||||||||| || |||||||||||||||||| |||||    
T  15009241 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaa 15009306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 35459888 - 35459823
Alignment:
Q  124 gaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaat 189  Q
    ||||||||||| || |||||| || |||||||||||| || ||||||| ||||||| |||||||||    
T  35459888 gaaaattctatggtgaagtcatgagaatgacttttttcgtaaagttaatactataatataaaaaat 35459823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 24823467 - 24823407
Alignment:
Q  119 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataa 179  Q
    ||||||||||| |||| ||||||| | || |||||||||||| || |||||||||||||||    
T  24823467 ataaggaaaatactatggtaaagttatgagaatgacttttttggtgaagttaacactataa 24823407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 41362517 - 41362639
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||| | ||||||||||||||| || ||||||||||  || ||| |||||| || ||||||||||| | ||| |||||| | ||    
T  41362517 ggaaaattctatggtgaagttatgaaaatgacttttttggtgaagttaacac--tagcat-aaaaatgtagtgagtaacacc-ccactatttgtatagtg 41362612  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| |||||  ||||||||||    
T  41362613 acatcaaaagttcagacctcatagtat 41362639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 248
Target Start/End: Complemental strand, 4133199 - 4133077
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||| ||| || ||||||  | |||||||||||| || ||||||||||  || ||||||||| ||| ||||||| |||   |||||||||||| ||    
T  4133199 ggaaaattttatggtcaagtcatcagaatgacttttttggtgaagttaacac--tagcataaaaaagatagtgagtaatacc-tgactgtttgtacagtg 4133103  T
Q  223 acattaaaaattcagttctcatagta 248  Q
     ||| |||| |||||| |||||||||    
T  4133102 gcatcaaaagttcagtcctcatagta 4133077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 1149762 - 1149698
Alignment:
Q  184 aaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtat 249  Q
    |||||| |||||||||||| | | ||||||||||||||||||| |||| ||| || ||||||||||    
T  1149762 aaaaatgtaatgagtaacaaccc-actgtttgtacaatgacatcaaaagttctgtcctcatagtat 1149698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 121 - 249
Target Start/End: Original strand, 5627389 - 5627516
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||  || ||||||  | |||||||||||| || |||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||    
T  5627389 aaggaaaattctaaggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatataatgagtaacacc-ccactatttgtagaa 5627487  T
Q  221 tgacattaaaaattcagttctcatagtat 249  Q
    |||||| |||| |||||  ||||||||||    
T  5627488 tgacatcaaaagttcagccctcatagtat 5627516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 119 - 249
Target Start/End: Original strand, 1945829 - 1945959
Alignment:
Q  119 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagtt-aagttaacactataacataaaaaatataatgagtaacaccactactgtttgta 217  Q
    |||||||||||||||  || ||||||  | |||||||||||| | | |||||||||||||||||| |||||| |||||||||||||| | ||||||||||    
T  1945829 ataaggaaaattctacggtgaagtcataagaatgactttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ccactgtttgta 1945927  T
Q  218 caatgacattaaaaattcagttctcatagtat 249  Q
     |||||||| |||| |||||  ||||||||||    
T  1945928 gaatgacatcaaaagttcagccctcatagtat 1945959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 4319009 - 4318895
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || |||||| || |||||||||||| || |||||||||||||||||| |||| | | |||||||||||| | ||||||||||||     
T  4319009 aaggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaagtgttatgagtaacacc-ccactgtttgtacag 4318911  T
Q  221 tgacattaaaaattca 236  Q
    |||||| |||| ||||    
T  4318910 tgacatcaaaagttca 4318895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 122 - 249
Target Start/End: Complemental strand, 7055400 - 7055274
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||| ||| || ||||||  | ||||| |||||| || |||||||||||||||||||||||||||||| ||||||||| | ||| |||||| |||    
T  7055400 aggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactataacataaaaaatataattagtaacacctc-actatttgtagaat 7055302  T
Q  222 gacattaaaaattcagttctcatagtat 249  Q
    ||||| |||| |||||  ||||||||||    
T  7055301 gacatcaaaagttcagccctcatagtat 7055274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 238
Target Start/End: Complemental strand, 33893186 - 33893072
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| |||||||||  | ||| | ||||||||| |||||||||||||||||| |||| | |  ||||||||||| | ||| |||||||||||    
T  33893186 ggaaaattctatggtaaagtcattagaataatttttttagtgaagttaacactataacatcaaaagtgttgtgagtaacacc-ccactatttgtacaatg 33893088  T
Q  223 acattaaaaattcagt 238  Q
    | ||||||| ||||||    
T  33893087 atattaaaagttcagt 33893072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 238
Target Start/End: Original strand, 8513232 - 8513347
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || |||||| || |||||||||| | || ||||||||||||||| || |||| | |  ||||||||||| | |||||||||||| |    
T  8513232 aggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataatatcaaaagtgttgtgagtaacacc-ccactgtttgtacagt 8513330  T
Q  222 gacattaaaaattcagt 238  Q
    ||||| |||| ||||||    
T  8513331 gacatcaaaagttcagt 8513347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 249
Target Start/End: Complemental strand, 3880124 - 3879998
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || |||||| || |||||||||| | || ||||||||| ||||  || |||| | |  ||||||||||| ||||||||||||||||    
T  3880124 aggaaaattctatggtgaagtcacgagaatgacttttctggtgaagttaacattatagtatcaaaagtgttgtgagtaacacc-ctactgtttgtacaat 3880026  T
Q  222 gacattaaaaattcagttctcatagtat 249  Q
    ||||| |||| |||| | | ||||||||    
T  3880025 gacatcaaaagttcaatccccatagtat 3879998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 249
Target Start/End: Complemental strand, 6091363 - 6091242
Alignment:
Q  126 aaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgaca 225  Q
    ||||||||| || |||||| |||||| | |||||| || ||||||||| | ||||||||||||| || |||||||||| || | ||||||||||||| ||    
T  6091363 aaattctattgtgaagtcatgaaaataatttttttggtaaagttaaca-tgtaacataaaaaatgtagtgagtaacac-accattgtttgtacaatgcca 6091266  T
Q  226 ttaaaaattcagttctcatagtat 249  Q
    | |||| |||||| ||| ||||||    
T  6091265 tcaaaagttcagtactcgtagtat 6091242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 21017280 - 21017171
Alignment:
Q  139 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 238  Q
    |||||| ||||||||||||||| || ||||||||| | ||  ||||||||| |  ||||||||||| | | | ||||||||||| ||| |||| ||||||    
T  21017280 aagtcacgaaaatgacttttttggtgaagttaacattgtagtataaaaaatgttgtgagtaacacc-ccattatttgtacaatggcatcaaaagttcagt 21017182  T
Q  239 tctcatagtat 249  Q
     | ||||||||    
T  21017181 ccccatagtat 21017171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 24662238 - 24662189
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaac 172  Q
    |||||||||||| ||||||||| || |||||||||| |||| ||||||||    
T  24662238 ggaaaattctatggtaaagtcatgataatgacttttctagtgaagttaac 24662189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 5112490 - 5112363
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||| ||| || |||||| ||||||||||||||| || ||||||| |||||||||||||||||||| ||||||||||| | ||||||||||||     
T  5112490 aaggaaaattttatggtgaagtcatgaaaatgacttttttggtgaagttaatactataacataaaaaatatagtgagtaacacc-ccactgtttgtacag 5112392  T
Q  221 tgacattaaaaattcagttctcatagtat 249  Q
    || ||| |||| |||||| | ||||||||    
T  5112391 tggcatcaaaagttcagtccccatagtat 5112363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 117 - 249
Target Start/End: Original strand, 36860417 - 36860548
Alignment:
Q  117 acataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgt 216  Q
    |||||||||||||||||| || |||||| |||||||| |||| | || ||||||||||||||  ||||||||| |  ||||||||||| | |||||||||    
T  36860417 acataaggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactatagtataaaaaatgttgtgagtaacacc-ccactgtttgt 36860515  T
Q  217 acaatgacattaaaaattcagttctcatagtat 249  Q
    |||||||||| |||| |||||| | ||||||||    
T  36860516 acaatgacatcaaaagttcagtccccatagtat 36860548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 249
Target Start/End: Original strand, 39572818 - 39572944
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || |||||| || |||||||||| |||||||||||| ||||||| ||||||||| |  ||||||||| | | ||||||||| || |    
T  39572818 aggaaaattctatggtgaagtcatgagaatgacttttctagttaagttaatactataatataaaaaatgttgtgagtaaca-ctccactgtttgtgcagt 39572916  T
Q  222 gacattaaaaattcagttctcatagtat 249  Q
    ||||| |||| |||||||||||||||||    
T  39572917 gacatcaaaagttcagttctcatagtat 39572944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 238
Target Start/End: Complemental strand, 1429321 - 1429206
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||| ||||| || |||||| |||||||||| |||| || |||||||||||||| ||| ||||||||| ||||||||||| | |||||||||||| |    
T  1429321 aggaaaaatctatggtgaagtcatgaaaatgactcttttggtgaagttaacactatagcatcaaaaatatagtgagtaacacc-ccactgtttgtacact 1429223  T
Q  222 gacattaaaaattcagt 238  Q
    | ||| |||||||||||    
T  1429222 ggcatcaaaaattcagt 1429206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 35826660 - 35826533
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || |||||| || |||||||||||| || ||||||| |||||||||| |||||| || ||||||||||  | | ||||||||||     
T  35826660 aaggaaaattctatggtgaagtcatgataatgactttttttgtgaagttaatactataacatcaaaaatgtactgagtaacacttc-attgtttgtacag 35826562  T
Q  221 tgacattaaaaattcagttctcatagtat 249  Q
    |||||| |||| |||||| ||||||||||    
T  35826561 tgacatcaaaagttcagtcctcatagtat 35826533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 121 - 249
Target Start/End: Original strand, 24886100 - 24886229
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgactttttta--gttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 218  Q
    |||||||||| ||| || || ||| || ||||||||||||   || ||||||| |||||||||| |||||| |||||||||||||| | |||||||||||    
T  24886100 aaggaaaattttatggtgaaatcatgagaatgacttttttttggtgaagttaatactataacatcaaaaatgtaatgagtaacacc-ccactgtttgtac 24886198  T
Q  219 aatgacattaaaaattcagttctcatagtat 249  Q
    |||||||| |||| |||||| ||||||||||    
T  24886199 aatgacatcaaaagttcagtcctcatagtat 24886229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 31705785 - 31705679
Alignment:
Q  124 gaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 223  Q
    ||||||||||| || ||||||  ||||||| |||||| || |||||||||||||||||| |||||| ||| |||||||||| |||| |||||||||||||    
T  31705785 gaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacacc-ctaccgtttgtacaatga 31705687  T
Q  224 cattaaaa 231  Q
    ||| ||||    
T  31705686 catcaaaa 31705679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 12910348 - 12910445
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    |||||||||||||| || |||||| ||||||||||||||| || ||||||| |||||||||| ||||||||| || |||||||| | ||||||||||||    
T  12910348 aaggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactataacatcaaaaatatagtgcgtaacacc-ccactgtttgtaca 12910445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 26317859 - 26317778
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 204  Q
    ||||||||||||  | |||||| ||||||||||||||| || |||||||||||||||||| |||||||||| ||||||||||    
T  26317859 ggaaaattctatgatgaagtcatgaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacacc 26317778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 245
Target Start/End: Complemental strand, 22974259 - 22974136
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || |||| | || ||||| |||||| || |||||||||||||||||| |||||  |||||||||||| | | |||||||||||||    
T  22974259 aaggaaaattctatggtgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaaaagtaatgagtaacatc-ccactgtttgtacaa 22974161  T
Q  221 tgacattaaaaattcagttctcata 245  Q
    | |||| |||| |||| ||||||||    
T  22974160 taacatcaaaagttcaattctcata 22974136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 238
Target Start/End: Original strand, 36866762 - 36866876
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||||| |||||||| |||| | || ||||||||||||||| || ||||||||  ||||||||||| | |||||||||||||||    
T  36866762 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactataatatcaaaaatattgtgagtaacacc-ccactgtttgtacaatg 36866860  T
Q  223 acattaaaaattcagt 238  Q
     ||| |||| ||||||    
T  36866861 gcatcaaaagttcagt 36866876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 27318646 - 27318537
Alignment:
Q  139 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 238  Q
    |||||| || ||||| |||| | || |||||||||||| |||||||||||| || ||||||||| ||| ||||||||||||||||||| |||| || |||    
T  27318646 aagtcatgagaatgatttttctggtgaagttaacactaaaacataaaaaatgtagtgagtaaca-caccactgtttgtacaatgacatcaaaagtttagt 27318548  T
Q  239 tctcatagtat 249  Q
    ||||| |||||    
T  27318547 tctcacagtat 27318537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 245
Target Start/End: Original strand, 22255179 - 22255303
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacat-aaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    |||||||| ||||  || ||||||  ||||| |||||||| || ||||||||| |||||||| ||||||| |||||||||||||| | || |||||||||    
T  22255179 aaggaaaactctacggtgaagtcataaaaataacttttttggtgaagttaacattataacatcaaaaaatgtaatgagtaacacccc-accgtttgtaca 22255277  T
Q  220 atgacattaaaaattcagttctcata 245  Q
    ||| ||| |||| |||||||||||||    
T  22255278 atggcatcaaaagttcagttctcata 22255303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 17158209 - 17158098
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagtt---aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 218  Q
    ||||||||||||| || ||||||  ||||||| ||||||  ||   ||||||||||||||||||||||||| |||||||||||| | | || ||||||||    
T  17158209 aggaaaattctatggtgaagtcataaaaatgatttttttttttgtgaagttaacactataacataaaaaatgtaatgagtaaca-ctccaccgtttgtac 17158111  T
Q  219 aatgacattaaaa 231  Q
    |||||||| ||||    
T  17158110 aatgacatcaaaa 17158098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 249
Target Start/End: Original strand, 5829921 - 5830026
Alignment:
Q  147 aaaatgacttttttagttaagttaacactataa----cataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctc 242  Q
    ||||||| |||||| || ||||||||| |||||    |||||||||| |||||||||||||| |||| |||||||||||||||| |||| || ||| |||    
T  5829921 aaaatgatttttttggtgaagttaacattataattaacataaaaaatgtaatgagtaacacc-ctaccgtttgtacaatgacatcaaaagtttagtcctc 5830019  T
Q  243 atagtat 249  Q
    |||||||    
T  5830020 atagtat 5830026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 8742064 - 8741947
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || |||||| || |||||||||| | || |||||||||||||| ||| |||| | |  ||||||||||| | | |||||||||||    
T  8742064 aaggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacacccccattgtttgtacaa 8741965  T
Q  221 tgacattaaaaattcagt 238  Q
    || ||| |||| ||||||    
T  8741964 tggcatcaaaagttcagt 8741947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 14919706 - 14919578
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagtt-aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    |||||||||| ||| || |||||| || ||| | |||||| | | ||||||||| |||||||| |||||| |||||||||||||| | ||||||| || |    
T  14919706 aaggaaaattatatggtgaagtcatgagaattattttttttgatgaagttaacattataacatcaaaaatgtaatgagtaacacctc-actgtttatata 14919608  T
Q  220 atgacattaaaaattcagttctcatagtat 249  Q
    ||||||| |||| |||||| ||||||||||    
T  14919607 atgacatcaaaagttcagtcctcatagtat 14919578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 38528413 - 38528287
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || |||||| |||||||  |||| |  | |||||||||||||||||| |||| | |||||||||||||| | | ||||| ||||     
T  38528413 aaggaaaattctatggtgaagtcatgaaaatggtttttctgatgaagttaacactataacatcaaaattgtaatgagtaacacc-ccattgtttatacag 38528315  T
Q  221 tgacattaaaaattcagttctcatagtat 249  Q
    |||||| |||| ||||| |||||||||||    
T  38528314 tgacatcaaaagttcag-tctcatagtat 38528287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 13956523 - 13956425
Alignment:
Q  120 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    ||||||||||||||  || |||||| ||||||||||||| |  | |||||||||||||||||| |||| | || ||||||||||| | ||||||||||||    
T  13956523 taaggaaaattctacggtgaagtcatgaaaatgacttttctcatgaagttaacactataacatcaaaactgtagtgagtaacacctc-actgtttgtaca 13956425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 15724490 - 15724592
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||| | || |||||||||||| || |||||||||||||||||| |||| | |  ||||||||||| | ||||||| |||||||    
T  15724490 ggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaacactataacatcaaaagttttgtgagtaacacc-ccactgtttatacaatg 15724588  T
Q  223 acat 226  Q
    ||||    
T  15724589 acat 15724592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 249
Target Start/End: Original strand, 27330303 - 27330429
Alignment:
Q  120 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    ||||||||||||||| || |||||  |  |||||||||| | || |||||||||||||||||| |||| | |  |||||||||||  |||||||||||||    
T  27330303 taaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgt--tgagtaacacc-ttactgtttgtaca 27330399  T
Q  220 atgacattaaaaattcagttctcatagtat 249  Q
    ||| ||| |||| ||||||  |||||||||    
T  27330400 atggcatcaaaagttcagtcttcatagtat 27330429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 699192 - 699264
Alignment:
Q  165 aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 238  Q
    |||||||||||||| |||||||||| || ||||||||||| | |||||||||||| |||||| |||| ||||||    
T  699192 aagttaacactatagcataaaaaatctagtgagtaacacc-ccactgtttgtacagtgacatcaaaagttcagt 699264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 238
Target Start/End: Original strand, 40133385 - 40133499
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||||| ||||||||||||| | || ||||||||| ||||  || |||||| |  ||||||||||| | ||| |||||||||||    
T  40133385 ggaaaattctatggtgaagtcacgaaaatgacttttgtggtgaagttaacattatagtatcaaaaatgttgtgagtaacacc-ccactatttgtacaatg 40133483  T
Q  223 acattaaaaattcagt 238  Q
     ||| |||| ||||||    
T  40133484 gcatcaaaagttcagt 40133499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 7209037 - 7208924
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagtt-aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 223  Q
    |||||||||  || ||||||  |||||||||||||| | | ||||||||| | |||||||||||||  || |||||||||| |||| ||||||||| |||    
T  7209037 aaaattctacggtgaagtcataaaaatgactttttttggtgaagttaacattgtaacataaaaaatgcaacgagtaacacc-ctaccgtttgtacattga 7208939  T
Q  224 cattaaaaattcagt 238  Q
    ||| |||| ||||||    
T  7208938 catcaaaagttcagt 7208924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 7693230 - 7693355
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || ||||||  |||||||||||| | || |||||||||||||||||| |||| | |  ||||||||| | | |||||||||||| ||    
T  7693230 ggaaaattctatggtgaagtcattaaaatgacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacatc-ccactgtttgtacagtg 7693328  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
     ||| |||| |||| | ||| ||||||    
T  7693329 gcatcaaaagttcaatcctcttagtat 7693355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 247
Target Start/End: Original strand, 19119857 - 19119982
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || |||||| || |||||||||| | || |||||||||||||| ||| |||| | |    ||||||||| | ||||||||||||     
T  19119857 aaggaaaattctatggtgaagtcatgagaatgacttttgtggtgaagttaacactatagcatcaaaagtgttgctagtaacacc-ccactgtttgtacag 19119955  T
Q  221 tgacattaaaaattcagttctcatagt 247  Q
    |||||| |||| |||||| | ||||||    
T  19119956 tgacatcaaaagttcagtccccatagt 19119982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 23116397 - 23116272
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || | |||| |||||||||||||||  | ||||||||| |||||||| |||| | || |||||| |||| | |||||||||||| ||    
T  23116397 ggaaaattctatggtgacgtcatgaaaatgactttttttatgaagttaacattataacatcaaaactgtagtgagtagcacc-ccactgtttgtacagtg 23116299  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
      || |||| |||||||  ||||||||    
T  23116298 gaatcaaaagttcagtttacatagtat 23116272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 249
Target Start/End: Complemental strand, 30969502 - 30969374
Alignment:
Q  120 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    ||||||||||||||   | |||||| || ||||| || | | || |||||||||||||||||| |||| | |  ||||||||||| | ||| ||| ||||    
T  30969502 taaggaaaattctacaatgaagtcatgagaatgatttatctggtgaagttaacactataacatcaaaagtgttgtgagtaacacccc-actatttataca 30969404  T
Q  220 atgacattaaaaattcagttctcatagtat 249  Q
    ||||||| |||| |||||| ||||||||||    
T  30969403 atgacatcaaaagttcagtcctcatagtat 30969374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 249
Target Start/End: Original strand, 9200232 - 9200358
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||| ||| || ||||||  ||||| |||||| | || |||||||||||||||||| |||| | |  ||||||||||| | || ||||||||| |    
T  9200232 aggaaaattttatggtgaagtcattaaaataacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacc-ccacagtttgtacagt 9200330  T
Q  222 gacattaaaaattcagttctcatagtat 249  Q
    ||||| |||| || ||| ||| ||||||    
T  9200331 gacatcaaaagtttagtcctcttagtat 9200358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 16004552 - 16004485
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaat-gacttttttagttaagttaacactataacataaaaaat 189  Q
    |||||||||||| ||||||||| || ||| ||||||| | || |||||||||||||||||| ||||||    
T  16004552 ggaaaattctatggtaaagtcatgagaattgacttttctggtgaagttaacactataacatcaaaaat 16004485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 204
Target Start/End: Original strand, 22255617 - 22255656
Alignment:
Q  165 aagttaacactataacataaaaaatataatgagtaacacc 204  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  22255617 aagttaacactataacatcaaaaatgtaatgagtaacacc 22255656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 5748478 - 5748516
Alignment:
Q  166 agttaacactataacataaaaaatataatgagtaacacc 204  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  5748478 agttaacactataacgtcaaaaatataatgagtaacacc 5748516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 14409501 - 14409420
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 204  Q
    |||||||||||| || |||||| || ||||| |||| | || |||| ||||||||||||| |||||| || |||||| ||||    
T  14409501 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactataacatcaaaaatgtagtgagtagcacc 14409420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 22980819 - 22980918
Alignment:
Q  149 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagta 248  Q
    |||||||||| | || ||||||||||||||  || ||||||| | ||||||| ||| | ||||||||  ||||||||| |||| |||||| | |||||||    
T  22980819 aatgacttttctggtgaagttaacactatagtatcaaaaatacagtgagtaatacc-ccactgtttgagcaatgacatcaaaagttcagtccccatagta 22980917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 33551189 - 33551064
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||  || |||||| || ||||||||||||||| |||||||||||||||||| |||||| || ||||||||||| | |||||||||||||||    
T  33551189 ggaaaattctacggtgaagtcatgagaatgacttttttagtgaagttaacactataacatcaaaaatgtagtgagtaacacc-ccactgtttgtacaatg 33551091  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| ||| ||  |||||||||    
T  33551090 acatcaaaagttcggtcttcatagtat 33551064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 35958909 - 35959022
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    ||||||||||||  | ||||||  |||||||||||||| || |||||  |||||||||||||||||| ||||||| |||||| | |||||||||||||||    
T  35958909 ggaaaattctatgatgaagtcataaaaatgacttttttggtgaagttgccactataacataaaaaatgtaatgagcaacacc-ccactgtttgtacaatg 35959007  T
Q  223 acattaaaaattcag 237  Q
    ||||||||| |||||    
T  35959008 acattaaaagttcag 35959022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 37905709 - 37905833
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||| |  ||||||| |||||| || ||||||||||||||||||||||||| ||| |||||||||| | || ||||||||||||    
T  37905709 ggaaaattctatggtgaagttataaaaatga-ttttttggtgaagttaacactataacataaaaaatgtaacgagtaacacc-ccaccgtttgtacaatg 37905806  T
Q  223 acattaaaaattcagttctcatagtat 249  Q
    |||| |||| |||||| ||||||||||    
T  37905807 acatcaaaagttcagtcctcatagtat 37905833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 19289523 - 19289401
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || |||||     ||||||||||||  | |||||||||||||||||| ||||||||||||||||||||| | | |||||||||||    
T  19289523 aaggaaaattctatggtgaagtc-----aatgacttttttgatgaagttaacactataacatcaaaaatataatgagtaacacc-ccattgtttgtacaa 19289430  T
Q  221 tgacattaaaaattcagttctcatagtat 249  Q
    |||||| |||| || |||||||| |||||    
T  19289429 tgacatcaaaagttaagttctcacagtat 19289401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 249
Target Start/End: Original strand, 4166918 - 4167047
Alignment:
Q  119 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 218  Q
    |||||||||||||||| || |||||| ||||||||||||| | || ||||||||| ||||  || ||||||||  ||||||||||| | |||||||||||    
T  4166918 ataaggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacattatagtatcaaaaatattgtgagtaacacc-ccactgtttgtac 4167016  T
Q  219 aatgacattaaaaattcagttctcatagtat 249  Q
    |||| ||| |||| |||||| | ||||||||    
T  4167017 aatggcatcaaaagttcagtccccatagtat 4167047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 249
Target Start/End: Complemental strand, 29242344 - 29242216
Alignment:
Q  120 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    ||||||||||||||| || |||||| |||||||  |||||| || ||||||| |||||||||||||||||||| || |||||||| | ||||||||||||    
T  29242344 taaggaaaattctatggtgaagtcatgaaaatggtttttttggtgaagttaaaactataacataaaaaatatagtgcgtaacacc-ccactgtttgtaca 29242246  T
Q  220 atgacattaaaaattcagttctcatagtat 249  Q
     ||  || |||| ||||||  |||||||||    
T  29242245 gtggtatcaaaagttcagtcttcatagtat 29242216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 249
Target Start/End: Complemental strand, 33660569 - 33660446
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 224  Q
    |||||||||| || ||||||  |||||||||||| ||||||||||||||||||||||| |||| | |  ||||||||||| | |||||||||||| || |    
T  33660569 aaaattctatggtgaagtcattaaaatgacttttctagttaagttaacactataacatcaaaagtgttgtgagtaacacc-caactgtttgtacagtggc 33660471  T
Q  225 attaaaaattcagttctcatagtat 249  Q
    || |||| |||||| ||| ||||||    
T  33660470 atcaaaagttcagtcctcttagtat 33660446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 43648415 - 43648323
Alignment:
Q  156 tttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtat 249  Q
    ||||| || |||||||||||||||||| |||||| |||||||||||||| | |||||||||| |||||||| |||| ||||||  |||||||||    
T  43648415 tttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacctc-actgtttgtataatgacatcaaaagttcagtcatcatagtat 43648323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 249
Target Start/End: Complemental strand, 11366585 - 11366459
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || || |||  | |||||||||||| || || ||||||||||||||| |||||| |||||||||||| | | ||| |||||| |||    
T  11366585 aggaaaattctatggtgaaatcataagaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatctc-actatttgtataat 11366487  T
Q  222 gacattaaaaattcagttctcatagtat 249  Q
    ||||| |||| |||||  ||||||||||    
T  11366486 gacatcaaaagttcagccctcatagtat 11366459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 246
Target Start/End: Original strand, 26357577 - 26357699
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||| ||| || |||||| ||||||||||||| |  | |||||||||||||||||| |||| | || ||||||||| | | |||||||||||| ||    
T  26357577 ggaaaattttatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtgagtaacatc-ccactgtttgtacagtg 26357675  T
Q  223 acattaaaaattcagttctcatag 246  Q
    |||| |||| ||||||||| ||||    
T  26357676 acatcaaaagttcagttcttatag 26357699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 249
Target Start/End: Original strand, 3176941 - 3177064
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 224  Q
    |||||||||| || |||| | ||||||||||||| |  | ||||||| ||||||| || |||||| |  ||||||||||  | |||||||||||||||||    
T  3176941 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaatactataatatcaaaaatgttttgagtaacacg-caactgtttgtacaatgac 3177039  T
Q  225 attaaaaattcagttctcatagtat 249  Q
    || |||| |||||| ||||||||||    
T  3177040 atcaaaagttcagtcctcatagtat 3177064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 17054300 - 17054192
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || |||||| |  |||||||||||| || ||||||| |||||||||| |||||| || | ||||||| | | | ||||||||||||    
T  17054300 aggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaatactataacatcaaaaatgtagtaagtaacatctc-attgtttgtacaat 17054202  T
Q  222 gacattaaaa 231  Q
    ||||| ||||    
T  17054201 gacatcaaaa 17054192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 2325575 - 2325448
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||||||| || |||| | |  |||||||||| | || ||||||||| |||||||| | |||| || ||||||||||| | | ||||||||||     
T  2325575 aaggaaaattctatggtgaagttatgtgaatgacttttctcgtgaagttaacaatataacatcataaatgtattgagtaacacc-ccattgtttgtacac 2325477  T
Q  221 tgacattaaaaattcagttctcatagtat 249  Q
    || ||| |||| |||||| ||||||||||    
T  2325476 tggcatcaaaagttcagtcctcatagtat 2325448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 39167568 - 39167441
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 220  Q
    |||||||||| ||| || |||||| || ||||| ||||||  | |||||||||  |||  || |||| |||  ||||||||||| | |||||||||||||    
T  39167568 aaggaaaattttatggtgaagtcacgagaatgatttttttgatgaagttaacagaatagtatcaaaagtattgtgagtaacacctc-actgtttgtacaa 39167470  T
Q  221 tgacattaaaaattcagttctcatagtat 249  Q
    |||||| |||| |||||| ||||||||||    
T  39167469 tgacatcaaaagttcagtcctcatagtat 39167441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 253
Target Start/End: Original strand, 4763628 - 4763760
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaaca---ctataacataaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    ||||||||||||  | |||||| ||||||||||||| |  | |||||||||   ||||| ||  |||| | || ||||||||||| | ||||||||||||    
T  4763628 ggaaaattctatgatgaagtcatgaaaatgacttttctgatgaagttaacaacactatatcaacaaaactgtagtgagtaacacccc-actgtttgtaca 4763726  T
Q  220 atgacattaaaaattcagttctcatagtataatc 253  Q
     |||||| |||| |||||||| ||||||||||||    
T  4763727 gtgacatcaaaagttcagttcccatagtataatc 4763760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 249
Target Start/End: Complemental strand, 17071941 - 17071815
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || |||||| |  |||||||||||| || |||||||||||||||||  |||||| || | ||||||| | | | | ||||||||||    
T  17071941 aggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaacactataacaacaaaaatgtagtaagtaacatctc-attatttgtacaat 17071843  T
Q  222 gacattaaaaattcagttctcatagtat 249  Q
    ||||| |||| ||| ||  |||||||||    
T  17071842 gacatcaaaagttcggtattcatagtat 17071815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 27350109 - 27350027
Alignment:
Q  155 ttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 238  Q
    |||||| || |||||||||||||| ||| |||||| |  ||||||||||||| |||||||||||| |||||| |||| ||||||    
T  27350109 ttttttggtgaagttaacactatagcatcaaaaatgttgtgagtaacaccac-actgtttgtacagtgacatcaaaagttcagt 27350027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 33902094 - 33902191
Alignment:
Q  149 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagta 248  Q
    |||||||||| | || ||||||||||  ||||||||||||| || ||||||| ||| | |||||||||| |||||||| |||| |||||| |||| ||||    
T  33902094 aatgacttttctggtgaagttaacac--taacataaaaaatgtagtgagtaatacc-ccactgtttgtaaaatgacatcaaaagttcagtcctcaaagta 33902190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 249
Target Start/End: Original strand, 36641983 - 36642111
Alignment:
Q  120 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 219  Q
    |||| |||||||||| || |||||| || |||||||||| | || || |||| |||||| ||| |||| | |   |||||||||| | ||||||||||||    
T  36641983 taagaaaaattctatggtgaagtcatgagaatgacttttctggtgaaattaatactatagcatcaaaagtgttgcgagtaacacctc-actgtttgtaca 36642081  T
Q  220 atgacattaaaaattcagttctcatagtat 249  Q
     |||||| |||| |||||| ||||||||||    
T  36642082 gtgacatcaaaagttcagtcctcatagtat 36642111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 238
Target Start/End: Complemental strand, 4264281 - 4264166
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || ||||||  | |||||||||| | || |||||||||||||| ||| |||| | |  ||||||||| | | |||||||||||| |    
T  4264281 aggaaaattctatggtgaagtcatcataatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgagtaacatc-ccactgtttgtacagt 4264183  T
Q  222 gacattaaaaattcagt 238  Q
    ||||| |||| ||||||    
T  4264182 gacatcaaaagttcagt 4264166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 18494473 - 18494390
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 204  Q
    |||||||||||| | || |||||| ||||||||||||| | || |||||||||||||| ||| |||| | |  |||||||||||    
T  18494473 aaggaaaattctgtggtgaagtcatgaaaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacacc 18494390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 34441972 - 34441921
Alignment:
Q  120 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaa 171  Q
    ||||||||||||||| || |||||| ||||||||||||||| || |||||||    
T  34441972 taaggaaaattctatggtgaagtcatgaaaatgacttttttggtaaagttaa 34441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 41960880 - 41960947
Alignment:
Q  120 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaa 187  Q
    ||||||||||||||| || ||||||   |||||||||||||  | |||||||||||||||||| ||||    
T  41960880 taaggaaaattctatggtgaagtcatagaaatgacttttttgatgaagttaacactataacatcaaaa 41960947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 44913662 - 44913774
Alignment:
Q  123 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 222  Q
    |||||||||||| || |||||| ||||||||||||| | || ||||||||||| ||  || |||||| |  ||||||||||| |   |||||||| ||||    
T  44913662 ggaaaattctatggtgaagtcacgaaaatgacttttat-gtgaagttaacactgtagtatcaaaaatgttgtgagtaacacctcacttgtttgtaaaatg 44913760  T
Q  223 acattaaaaattca 236  Q
    |||| |||| ||||    
T  44913761 acataaaaagttca 44913774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 249
Target Start/End: Complemental strand, 41464051 - 41463928
Alignment:
Q  125 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 224  Q
    |||||||||| || |||||  || |||||| ||||| || ||||||| ||||||| || |||| | |  ||||||||||| | |||||||||||| || |    
T  41464051 aaaattctatggtgaagtcgtgagaatgacatttttggtgaagttaatactataaaatcaaaagtgttgtgagtaacacctc-actgtttgtacagtggc 41463953  T
Q  225 attaaaaattcagttctcatagtat 249  Q
    || |||| |||| | ||||||||||    
T  41463952 atcaaaagttcaatcctcatagtat 41463928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 7913 - 8012
Alignment:
Q  149 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagta 248  Q
    ||||||||||||  | |||||||||||||||||| |||| | |||||||||||||| | ||||||||||||||||||| |||| |||||| |||||||||    
T  7913 aatgacttttttgatgaagttaacactataacatcaaaattgtaatgagtaacacc-ccactgtttgtacaatgacatcaaaagttcagtcctcatagta 8011  T

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Target: scaffold0002 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 249
Target Start/End: Original strand, 133 - 259
Alignment:
Q  122 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 221  Q
    ||||||||||||| || |||||| ||||||||||||| | || ||||||||||| ||  ||||||||| |  ||||||||| | | ||||||||||||||    
T  133 aggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactgtagtataaaaaatgttgtgagtaaca-ctccactgtttgtacaat 231  T
Q  222 gacattaaaaattcagttctcatagtat 249  Q
    | ||| |||| |||||| ||||||||||    
T  232 ggcatcaaaagttcagtcctcatagtat 259  T

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Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 146175 - 146088
Alignment:
Q  149 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcag 237  Q
    ||||| |||||| |||||||||||| ||||||||||||||| |||||||||||||| | | | |||||| |||||||| |||| |||||    
T  146175 aatgatttttttggttaagttaacattataacataaaaaatgtaatgagtaacacc-ccattatttgtagaatgacatcaaaagttcag 146088  T

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Target: scaffold0061 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 43986 - 44082
Alignment:
Q  152 gacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtat 249  Q
    ||||||||| || |||||||| |||||| || |||||| |||||||||||||| |   ||||||||||||| ||| |||| |||||| ||||||||||    
T  43986 gacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacacc-ccgttgtttgtacaatggcataaaaagttcagtcctcatagtat 44082  T

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Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 249
Target Start/End: Complemental strand, 154801 - 154705
Alignment:
Q  152 gacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtat 249  Q
    ||||||||| || |||||||| |||||| || |||||| |||||||||||||| |   ||||||||||||| ||| |||| |||||| ||||||||||    
T  154801 gacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacacc-ccgttgtttgtacaatggcataaaaagttcagtcctcatagtat 154705  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 100819 - 100886
Alignment:
Q  121 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaa 188  Q
    |||||||||||||| || |||||| || ||||| |||||| || |||||||| ||||||||| |||||    
T  100819 aaggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacgctataacatcaaaaa 100886  T

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