View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20625_low_44 (Length: 232)
Name: NF20625_low_44
Description: NF20625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20625_low_44 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 32227467 - 32227686
Alignment:
| Q |
1 |
gaaagatgaaagtgtgnnnnnnngttctttttgtggttgtcatgacaatgggaggaattgtgtagaataaaagagtagtcagtggacatgtttttgtgtt |
100 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32227467 |
gaaagatgaaagtgtgtttttttgttctttttgtggttgtcatgacaatgggaggaattgtgtagaataaaagagtagtcagtggacatgtttttgtgtt |
32227566 |
T |
|
| Q |
101 |
cctctctcttgaactaaggttgggactgctctacgatgtattgtttataatttttggtggataacatctacataaattatcttgaatgtttcagtataga |
200 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
32227567 |
cctctctcttgaac-aaggttgggactgctctacgatgtattgtttataatttttggtggataacatctacataaattatcttgaatgttccagtataga |
32227665 |
T |
|
| Q |
201 |
tcgtttgatgttaaagttcat |
221 |
Q |
| |
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||||||||||||||||||||| |
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|
| T |
32227666 |
tcgtttgatgttaaagttcat |
32227686 |
T |
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