View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20626_high_7 (Length: 514)
Name: NF20626_high_7
Description: NF20626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20626_high_7 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 459; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 13 - 514
Target Start/End: Complemental strand, 1497514 - 1497013
Alignment:
| Q |
13 |
aaaatagtaatacttagctaagtgaaacatgtgttgtttttgacatataatgcattgaatggaattatatttcctaaagcaaggtgtttgagccttttgg |
112 |
Q |
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| T |
1497514 |
aaaatagtaatacttagcta-gtgaaacatgtgttgtttttgacatataatgcattgaatggaattatatttcctaaagcaaggtgtttgagccttttgg |
1497416 |
T |
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| Q |
113 |
ctactcataggggaaacactgaatgttatactagatgttggcaaacttggggttataggcacatgaatgtgtaaaacaaagttagaaaatagtttctcaa |
212 |
Q |
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| T |
1497415 |
ctactcataggggaaacagtgaatgttatactagatgttgtaaaacttggggttataggcacatgaatgtgtaaaacaaagttagaaaatagtttctcaa |
1497316 |
T |
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| Q |
213 |
atgtaatttatttgttaagacattcaagtgatccggtttttccttcactagtttgattttttgtggcatatatagacagaaatgtgtaaaggtaaaacta |
312 |
Q |
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| T |
1497315 |
atgtaatttatttgttaagacattcaagtgatccagtttttccttcactagtttgattttttgtggcatatatagacagaaatgtgtaaaggtaaaacta |
1497216 |
T |
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| Q |
313 |
ctaatatcgagtatataacaatagatgatacaaaagatttcaaggaaagttctaatttctaaagccaataaaactgcagcaagttctatacatagtgtat |
412 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
1497215 |
ctaatatcaagtatataacaatagatgatacaaaagatttcaaggaaagttctgatttctaaagccaataaaactgcagcaagttctatacatagggtat |
1497116 |
T |
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| Q |
413 |
cgaaacttgaaagtgattgaagttgaagccgtcgtatcaaagtagaagttcgc-cacttctttgttctaccaagtgagctgaatgcttaactcaaacaca |
511 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1497115 |
cgaaacttgaaagtgattgaagttgaagccgtcgtatcaaagtagaagttcgcacacttctttgttctaccaagtgagctgaatgcttaactcaaacaca |
1497016 |
T |
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| Q |
512 |
cat |
514 |
Q |
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| T |
1497015 |
cat |
1497013 |
T |
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