View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20627_high_9 (Length: 230)

Name: NF20627_high_9
Description: NF20627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20627_high_9
NF20627_high_9
[»] chr4 (68 HSPs)
chr4 (3-135)||(33696279-33696411)
chr4 (3-135)||(32986262-32986394)
chr4 (1-135)||(27528795-27528929)
chr4 (1-135)||(34723862-34723996)
chr4 (1-135)||(34844758-34844892)
chr4 (1-135)||(40058852-40058986)
chr4 (1-134)||(52983682-52983815)
chr4 (1-135)||(5609202-5609336)
chr4 (1-135)||(20566413-20566547)
chr4 (1-135)||(44343577-44343711)
chr4 (1-135)||(45787704-45787838)
chr4 (1-128)||(9517648-9517775)
chr4 (1-135)||(25852277-25852412)
chr4 (2-133)||(20077986-20078117)
chr4 (1-135)||(32990498-32990632)
chr4 (1-135)||(36131510-36131644)
chr4 (3-135)||(54127342-54127474)
chr4 (4-135)||(46714459-46714590)
chr4 (2-135)||(12500059-12500191)
chr4 (2-135)||(19660532-19660665)
chr4 (14-135)||(35229243-35229365)
chr4 (1-135)||(13584254-13584388)
chr4 (1-83)||(35674793-35674875)
chr4 (1-135)||(49287921-49288054)
chr4 (2-135)||(12824464-12824597)
chr4 (7-135)||(55961754-55961881)
chr4 (1-135)||(21387487-21387619)
chr4 (1-135)||(34835592-34835726)
chr4 (1-135)||(51535676-51535818)
chr4 (1-135)||(18875517-18875650)
chr4 (17-135)||(22488028-22488146)
chr4 (1-83)||(33992689-33992771)
chr4 (1-135)||(4911985-4912123)
chr4 (10-135)||(51595094-51595219)
chr4 (2-126)||(25969512-25969633)
chr4 (11-83)||(29875827-29875899)
chr4 (3-122)||(13550273-13550392)
chr4 (16-135)||(27574396-27574515)
chr4 (1-120)||(32942433-32942552)
chr4 (1-135)||(7391965-7392097)
chr4 (73-135)||(52494623-52494685)
chr4 (1-135)||(13771482-13771617)
chr4 (1-135)||(1985899-1986031)
chr4 (1-96)||(22625100-22625204)
chr4 (68-135)||(4064990-4065057)
chr4 (2-49)||(20527119-20527166)
chr4 (72-135)||(23639758-23639821)
chr4 (72-135)||(23645416-23645479)
chr4 (68-135)||(43719087-43719154)
chr4 (74-135)||(23131436-23131497)
chr4 (2-135)||(30879166-30879298)
chr4 (75-135)||(7093508-7093568)
chr4 (59-135)||(9978509-9978585)
chr4 (1-113)||(13873317-13873429)
chr4 (77-135)||(13781125-13781183)
chr4 (74-135)||(28791250-28791311)
chr4 (74-135)||(37302623-37302684)
chr4 (1-117)||(41085089-41085204)
chr4 (38-116)||(4585732-4585808)
chr4 (69-135)||(55158343-55158409)
chr4 (66-135)||(13017841-13017909)
chr4 (74-135)||(17637852-17637912)
chr4 (102-135)||(24672305-24672338)
chr4 (74-135)||(33289190-33289251)
chr4 (50-135)||(40252401-40252486)
chr4 (1-64)||(37455640-37455702)
chr4 (50-110)||(42508406-42508466)
chr4 (16-135)||(53787057-53787177)
[»] chr8 (46 HSPs)
chr8 (1-135)||(20305975-20306109)
chr8 (1-135)||(21092608-21092742)
chr8 (1-135)||(4718712-4718846)
chr8 (1-135)||(8765526-8765660)
chr8 (1-134)||(15259407-15259540)
chr8 (1-135)||(34237655-34237789)
chr8 (2-135)||(42328072-42328205)
chr8 (1-135)||(3734623-3734757)
chr8 (1-135)||(21603297-21603431)
chr8 (1-135)||(39349323-39349457)
chr8 (1-135)||(2618253-2618387)
chr8 (2-135)||(19471677-19471811)
chr8 (2-135)||(19542601-19542735)
chr8 (2-135)||(19589961-19590095)
chr8 (1-135)||(32879346-32879480)
chr8 (1-134)||(28193541-28193674)
chr8 (1-135)||(6953008-6953141)
chr8 (1-135)||(42643118-42643252)
chr8 (1-135)||(34610687-34610821)
chr8 (1-127)||(28088353-28088479)
chr8 (1-135)||(264400-264533)
chr8 (1-135)||(651388-651521)
chr8 (1-135)||(837123-837256)
chr8 (1-135)||(4698723-4698857)
chr8 (1-135)||(20469984-20470117)
chr8 (1-135)||(18128580-18128714)
chr8 (1-135)||(27746335-27746469)
chr8 (1-135)||(14633021-14633155)
chr8 (1-135)||(28964100-28964233)
chr8 (1-94)||(24999301-24999394)
chr8 (17-135)||(24018465-24018584)
chr8 (47-135)||(2639411-2639499)
chr8 (1-135)||(2166766-2166897)
chr8 (1-135)||(10292122-10292255)
chr8 (1-135)||(25248416-25248547)
chr8 (14-122)||(26168862-26168969)
chr8 (1-134)||(7557952-7558077)
chr8 (7-126)||(36848759-36848877)
chr8 (1-135)||(18532174-18532299)
chr8 (2-135)||(9047279-9047411)
chr8 (1-116)||(21667617-21667731)
chr8 (3-123)||(28908892-28909012)
chr8 (33-125)||(43817759-43817851)
chr8 (84-135)||(9713604-9713655)
chr8 (68-135)||(33747016-33747083)
chr8 (1-135)||(1219416-1219550)
[»] chr7 (58 HSPs)
chr7 (1-135)||(21835218-21835352)
chr7 (1-135)||(17196950-17197084)
chr7 (1-135)||(22119955-22120089)
chr7 (1-135)||(40542910-40543044)
chr7 (1-135)||(2751338-2751472)
chr7 (1-135)||(7175862-7175996)
chr7 (1-135)||(7275344-7275478)
chr7 (1-135)||(654705-654838)
chr7 (1-135)||(11997916-11998050)
chr7 (1-135)||(29861737-29861871)
chr7 (1-135)||(22703553-22703687)
chr7 (1-135)||(2103122-2103254)
chr7 (17-135)||(3851840-3851958)
chr7 (5-135)||(23092167-23092297)
chr7 (2-135)||(23012508-23012641)
chr7 (1-135)||(28089883-28090020)
chr7 (1-135)||(27009426-27009561)
chr7 (1-135)||(10091255-10091388)
chr7 (1-135)||(16374061-16374195)
chr7 (1-135)||(18044174-18044308)
chr7 (1-135)||(21217833-21217967)
chr7 (1-135)||(27312219-27312353)
chr7 (5-135)||(28950942-28951072)
chr7 (9-134)||(19421306-19421431)
chr7 (1-135)||(27704069-27704202)
chr7 (1-135)||(2344366-2344500)
chr7 (1-135)||(31273981-31274114)
chr7 (1-135)||(41907514-41907647)
chr7 (11-135)||(42913513-42913637)
chr7 (3-126)||(17212122-17212245)
chr7 (14-135)||(36772303-36772424)
chr7 (1-134)||(22638359-22638488)
chr7 (8-135)||(33137825-33137951)
chr7 (1-135)||(39145652-39145786)
chr7 (1-135)||(9717987-9718121)
chr7 (17-135)||(31197673-31197791)
chr7 (2-134)||(32849659-32849791)
chr7 (13-112)||(21373789-21373888)
chr7 (5-135)||(23330739-23330869)
chr7 (1-135)||(22643342-22643476)
chr7 (31-135)||(31712902-31713006)
chr7 (3-122)||(9683895-9684014)
chr7 (1-135)||(28647036-28647170)
chr7 (1-64)||(42814931-42814994)
chr7 (68-126)||(8943410-8943468)
chr7 (43-135)||(38864446-38864538)
chr7 (1-131)||(43785303-43785433)
chr7 (1-62)||(13332496-13332557)
chr7 (1-64)||(7799903-7799966)
chr7 (50-124)||(25333519-25333593)
chr7 (1-62)||(14199739-14199800)
chr7 (2-62)||(6491675-6491735)
chr7 (2-135)||(22696388-22696522)
chr7 (74-135)||(11909954-11910015)
chr7 (90-135)||(22299958-22300003)
chr7 (68-135)||(21574102-21574169)
chr7 (1-121)||(36173102-36173223)
chr7 (89-135)||(36395501-36395547)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-135)||(97366-97500)
scaffold0026 (90-134)||(2478-2522)
[»] chr6 (35 HSPs)
chr6 (1-135)||(34147409-34147543)
chr6 (1-135)||(34160025-34160159)
chr6 (1-134)||(9239038-9239171)
chr6 (1-135)||(11448934-11449068)
chr6 (1-135)||(15360098-15360232)
chr6 (1-135)||(654146-654280)
chr6 (1-135)||(3222636-3222769)
chr6 (1-135)||(5360071-5360205)
chr6 (1-135)||(21148511-21148644)
chr6 (2-135)||(17081054-17081187)
chr6 (1-135)||(1344998-1345132)
chr6 (1-135)||(21982321-21982454)
chr6 (1-113)||(12390488-12390600)
chr6 (17-135)||(9690638-9690756)
chr6 (1-135)||(28672130-28672264)
chr6 (7-135)||(9844007-9844135)
chr6 (1-135)||(14212955-14213079)
chr6 (1-135)||(9208315-9208449)
chr6 (17-135)||(11007244-11007362)
chr6 (1-135)||(11840964-11841097)
chr6 (17-135)||(14504082-14504200)
chr6 (1-133)||(17149458-17149590)
chr6 (37-135)||(15730495-15730593)
chr6 (2-96)||(31039084-31039177)
chr6 (1-62)||(12591700-12591761)
chr6 (33-126)||(28741850-28741944)
chr6 (2-135)||(33499539-33499672)
chr6 (3-133)||(10377780-10377911)
chr6 (70-134)||(27866204-27866268)
chr6 (73-128)||(33718476-33718531)
chr6 (74-135)||(8479433-8479494)
chr6 (94-135)||(13753347-13753388)
chr6 (103-135)||(4797262-4797294)
chr6 (5-80)||(6383930-6384005)
chr6 (103-135)||(7491666-7491698)
[»] chr3 (69 HSPs)
chr3 (1-135)||(40133449-40133583)
chr3 (1-135)||(25289715-25289848)
chr3 (1-135)||(8097279-8097413)
chr3 (1-135)||(8456150-8456284)
chr3 (1-135)||(26174176-26174310)
chr3 (1-135)||(30257687-30257821)
chr3 (1-135)||(35492974-35493108)
chr3 (1-135)||(45529755-45529888)
chr3 (1-135)||(49258262-49258396)
chr3 (2-135)||(10190742-10190875)
chr3 (1-135)||(15566500-15566633)
chr3 (1-135)||(18176887-18177021)
chr3 (1-135)||(32151487-32151621)
chr3 (1-135)||(39041852-39041986)
chr3 (1-135)||(45272416-45272550)
chr3 (1-135)||(46576411-46576545)
chr3 (2-135)||(10083819-10083952)
chr3 (1-135)||(30807153-30807287)
chr3 (1-135)||(2511297-2511431)
chr3 (1-135)||(52821636-52821769)
chr3 (1-135)||(53233911-53234044)
chr3 (2-135)||(31537838-31537971)
chr3 (1-135)||(21363006-21363140)
chr3 (1-135)||(34492575-34492709)
chr3 (1-135)||(48977451-48977585)
chr3 (1-135)||(52455649-52455783)
chr3 (1-135)||(53424177-53424310)
chr3 (1-126)||(25379824-25379949)
chr3 (1-135)||(33398468-33398602)
chr3 (1-135)||(40940888-40941022)
chr3 (1-135)||(48972714-48972845)
chr3 (1-117)||(51532852-51532968)
chr3 (1-135)||(24407324-24407458)
chr3 (1-82)||(26108355-26108436)
chr3 (1-135)||(8958035-8958170)
chr3 (1-128)||(19857114-19857241)
chr3 (32-135)||(24165715-24165817)
chr3 (26-135)||(17579135-17579245)
chr3 (2-135)||(25344058-25344190)
chr3 (9-117)||(29915288-29915395)
chr3 (9-117)||(29964441-29964548)
chr3 (67-135)||(53848434-53848502)
chr3 (1-135)||(4462696-4462829)
chr3 (1-123)||(53288725-53288846)
chr3 (1-135)||(7485531-7485659)
chr3 (2-135)||(11390666-11390799)
chr3 (34-135)||(54475777-54475878)
chr3 (1-135)||(1178235-1178367)
chr3 (35-135)||(33698706-33698806)
chr3 (46-134)||(48104985-48105073)
chr3 (1-62)||(1242036-1242098)
chr3 (1-126)||(49167119-49167247)
chr3 (1-62)||(7470288-7470349)
chr3 (88-135)||(3747731-3747778)
chr3 (17-135)||(1692913-1693030)
chr3 (73-135)||(4048085-4048147)
chr3 (1-110)||(50583055-50583163)
chr3 (72-126)||(55371303-55371357)
chr3 (98-135)||(39206156-39206193)
chr3 (74-135)||(50731237-50731298)
chr3 (74-135)||(50781556-50781617)
chr3 (51-135)||(32094757-32094841)
chr3 (1-49)||(55287866-55287914)
chr3 (15-62)||(14343361-14343408)
chr3 (68-126)||(4252405-4252463)
chr3 (49-135)||(7195918-7196004)
chr3 (69-135)||(25017620-25017685)
chr3 (68-126)||(26158941-26158999)
chr3 (13-135)||(6041670-6041794)
[»] chr1 (57 HSPs)
chr1 (1-135)||(7766727-7766861)
chr1 (1-135)||(4621237-4621371)
chr1 (1-135)||(15059402-15059536)
chr1 (1-135)||(24122086-24122220)
chr1 (1-135)||(24674456-24674590)
chr1 (2-135)||(30677240-30677373)
chr1 (1-135)||(46607873-46608007)
chr1 (1-134)||(17935832-17935965)
chr1 (1-135)||(9500355-9500489)
chr1 (1-135)||(7578472-7578606)
chr1 (1-133)||(8077710-8077841)
chr1 (8-135)||(8254752-8254879)
chr1 (1-135)||(7197247-7197380)
chr1 (2-135)||(18533724-18533857)
chr1 (1-135)||(27454864-27455000)
chr1 (1-131)||(1378961-1379090)
chr1 (1-135)||(32729608-32729741)
chr1 (1-135)||(36155888-36156022)
chr1 (1-126)||(21726792-21726917)
chr1 (11-135)||(40802069-40802191)
chr1 (1-108)||(168264-168371)
chr1 (1-135)||(23734179-23734314)
chr1 (1-135)||(23741371-23741506)
chr1 (1-135)||(45859043-45859177)
chr1 (1-126)||(18646916-18647041)
chr1 (1-110)||(29057363-29057471)
chr1 (1-97)||(23232299-23232399)
chr1 (1-135)||(40145882-40146020)
chr1 (1-96)||(7946907-7947001)
chr1 (2-134)||(34778406-34778535)
chr1 (17-126)||(8779745-8779854)
chr1 (42-135)||(22909975-22910068)
chr1 (44-135)||(26513148-26513238)
chr1 (68-135)||(48699889-48699956)
chr1 (1-135)||(1486481-1486617)
chr1 (1-135)||(33905510-33905644)
chr1 (1-134)||(37351454-37351595)
chr1 (2-135)||(2272408-2272541)
chr1 (11-135)||(45331621-45331746)
chr1 (14-133)||(2783065-2783184)
chr1 (71-135)||(23041655-23041719)
chr1 (1-135)||(25236990-25237123)
chr1 (68-135)||(27159215-27159282)
chr1 (56-135)||(50202664-50202742)
chr1 (89-135)||(14603947-14603993)
chr1 (1-62)||(32930812-32930873)
chr1 (66-135)||(35138116-35138185)
chr1 (55-134)||(88498-88577)
chr1 (2-109)||(2537762-2537864)
chr1 (88-135)||(5315481-5315528)
chr1 (12-93)||(19480608-19480691)
chr1 (1-40)||(46113497-46113536)
chr1 (68-135)||(47091751-47091818)
chr1 (33-106)||(12876965-12877038)
chr1 (17-125)||(43769975-43770082)
chr1 (47-135)||(31162859-31162947)
chr1 (51-134)||(36921513-36921596)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-135)||(5082-5216)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-135)||(40388-40521)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-135)||(161872-162006)
[»] chr5 (57 HSPs)
chr5 (1-135)||(27498731-27498865)
chr5 (2-135)||(8484661-8484794)
chr5 (1-135)||(18207270-18207404)
chr5 (1-135)||(7085626-7085760)
chr5 (2-135)||(11926501-11926635)
chr5 (1-135)||(15641106-15641239)
chr5 (5-135)||(19456211-19456340)
chr5 (1-135)||(32059440-32059574)
chr5 (1-135)||(34310205-34310339)
chr5 (1-135)||(38684271-38684404)
chr5 (7-135)||(35425082-35425210)
chr5 (9-135)||(6014280-6014406)
chr5 (1-135)||(30485891-30486025)
chr5 (1-135)||(33709503-33709635)
chr5 (1-135)||(4603840-4603974)
chr5 (1-135)||(31287946-31288080)
chr5 (1-135)||(19145412-19145545)
chr5 (1-135)||(37495110-37495251)
chr5 (1-135)||(10869565-10869699)
chr5 (1-126)||(13108459-13108583)
chr5 (2-135)||(10399837-10399971)
chr5 (1-135)||(12398448-12398582)
chr5 (1-135)||(21236362-21236496)
chr5 (1-126)||(11464917-11465041)
chr5 (1-126)||(13038464-13038588)
chr5 (3-135)||(5049202-5049333)
chr5 (1-128)||(42193548-42193673)
chr5 (17-135)||(9659311-9659429)
chr5 (21-135)||(13659245-13659359)
chr5 (3-135)||(25750613-25750741)
chr5 (1-135)||(26009264-26009398)
chr5 (1-106)||(15971151-15971256)
chr5 (11-135)||(27487554-27487679)
chr5 (1-135)||(23270522-23270656)
chr5 (1-126)||(36954881-36955006)
chr5 (68-135)||(22693065-22693132)
chr5 (1-62)||(25586995-25587056)
chr5 (26-135)||(34049899-34050008)
chr5 (42-135)||(41351104-41351196)
chr5 (68-135)||(38630979-38631046)
chr5 (9-135)||(12317155-12317276)
chr5 (46-135)||(22392796-22392885)
chr5 (3-135)||(31206307-31206440)
chr5 (1-46)||(38631050-38631095)
chr5 (69-135)||(5067392-5067458)
chr5 (1-62)||(15931122-15931182)
chr5 (70-135)||(25548534-25548599)
chr5 (31-135)||(28614486-28614589)
chr5 (72-135)||(930486-930549)
chr5 (72-135)||(7151437-7151500)
chr5 (88-135)||(10631289-10631336)
chr5 (1-135)||(36895488-36895622)
chr5 (85-135)||(39229207-39229257)
chr5 (46-126)||(18172898-18172978)
chr5 (8-135)||(22253144-22253272)
chr5 (1-135)||(41568869-41569002)
chr5 (1-49)||(1827616-1827664)
[»] chr2 (55 HSPs)
chr2 (1-135)||(33827573-33827707)
chr2 (1-135)||(44946053-44946187)
chr2 (3-135)||(11941210-11941342)
chr2 (1-135)||(17324829-17324961)
chr2 (1-135)||(35171863-35171997)
chr2 (1-135)||(15038022-15038156)
chr2 (1-135)||(36390569-36390702)
chr2 (1-135)||(5394080-5394214)
chr2 (1-135)||(13266553-13266686)
chr2 (1-135)||(30466830-30466964)
chr2 (1-135)||(41329906-41330039)
chr2 (1-126)||(36242321-36242446)
chr2 (11-135)||(28668946-28669070)
chr2 (1-135)||(24196067-24196199)
chr2 (1-135)||(2140486-2140617)
chr2 (2-135)||(19054089-19054223)
chr2 (1-113)||(10582014-10582124)
chr2 (1-135)||(25293229-25293356)
chr2 (1-135)||(41314055-41314188)
chr2 (1-135)||(43374330-43374459)
chr2 (2-83)||(23787060-23787141)
chr2 (18-135)||(34516414-34516530)
chr2 (8-135)||(3943810-3943937)
chr2 (12-135)||(27269344-27269467)
chr2 (17-122)||(19849912-19850017)
chr2 (1-126)||(45271447-45271572)
chr2 (1-116)||(44976172-44976288)
chr2 (1-135)||(4567429-4567571)
chr2 (16-135)||(714125-714244)
chr2 (1-135)||(8192352-8192485)
chr2 (69-135)||(18976455-18976521)
chr2 (1-79)||(27290651-27290729)
chr2 (45-135)||(31778138-31778228)
chr2 (31-128)||(4769259-4769356)
chr2 (1-62)||(5608107-5608168)
chr2 (66-135)||(18692088-18692157)
chr2 (66-135)||(44929846-44929915)
chr2 (1-135)||(8258960-8259094)
chr2 (71-135)||(39957891-39957955)
chr2 (4-119)||(1191579-1191694)
chr2 (56-135)||(6714295-6714374)
chr2 (1-50)||(918782-918831)
chr2 (74-135)||(19605846-19605907)
chr2 (42-135)||(44610143-44610236)
chr2 (68-135)||(14486955-14487022)
chr2 (1-40)||(32845154-32845193)
chr2 (49-126)||(45132398-45132475)
chr2 (89-135)||(1845049-1845095)
chr2 (93-135)||(27290729-27290771)
chr2 (70-135)||(13089012-13089077)
chr2 (1-135)||(29361616-29361745)
chr2 (69-125)||(4852660-4852716)
chr2 (18-62)||(19517022-19517066)
chr2 (68-116)||(32845206-32845254)
chr2 (46-126)||(38341844-38341924)
[»] scaffold0623 (1 HSPs)
scaffold0623 (1-135)||(1057-1190)
[»] scaffold0366 (2 HSPs)
scaffold0366 (1-135)||(9300-9433)
scaffold0366 (1-117)||(12019-12134)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-135)||(7309-7443)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-135)||(39155-39289)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-135)||(52871-53005)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-135)||(32351-32484)
[»] scaffold0157 (1 HSPs)
scaffold0157 (2-135)||(20286-20418)
[»] scaffold0459 (1 HSPs)
scaffold0459 (1-135)||(10695-10827)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-135)||(41645-41778)
[»] scaffold0328 (2 HSPs)
scaffold0328 (1-135)||(13047-13178)
scaffold0328 (3-126)||(15056-15178)
[»] scaffold1175 (1 HSPs)
scaffold1175 (26-135)||(2426-2535)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-135)||(66825-66951)
[»] scaffold0199 (1 HSPs)
scaffold0199 (73-135)||(8451-8513)
[»] scaffold0717 (1 HSPs)
scaffold0717 (1-92)||(1-92)
[»] scaffold0160 (1 HSPs)
scaffold0160 (1-135)||(29143-29276)


Alignment Details
Target: chr4 (Bit Score: 97; Significance: 8e-48; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 33696411 - 33696279
Alignment:
Q  3 attccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcga 102  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||| | |||||||||||||||| || ||||||||||||||     
T  33696411 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtgggcggtgagattggtcctctcgg 33696312  T
Q  103 attagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||| |||||||||||||||||||||||||    
T  33696311 attagtcaattcttggatcggatatcgagtttt 33696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 32986262 - 32986394
Alignment:
Q  3 attccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcga 102  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||| || ||||||||| ||||     
T  32986262 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcgg 32986361  T
Q  103 attagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||| ||||||||    
T  32986362 aatagtcgattcttggatcggataccgagtttt 32986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 27528929 - 27528795
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||| | | | |||||||||||||||| || ||||||||| |||    
T  27528929 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttatacggggcccccgcaagtgggcggtgagattggtcccctc 27528830  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  27528829 ggattagtcgattcttggatcggataccgagtttt 27528795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 34723862 - 34723996
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||||||| | | |||||||||||||| | || |||||||||||||    
T  34723862 cgattccctctggtgccaatttcggtgggctaagtccatacaaagcttgctctggctttaaacggggcccccgcaagtgggtggtgggattggtcctctc 34723961  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  34723962 ggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 34844892 - 34844758
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  34844892 cgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 34844793  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  34844792 ggattagtcgattcttggatcggataccgagtttt 34844758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 40058986 - 40058852
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  40058986 cgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 40058887  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  40058886 ggattagtcgattcttggatcggataccgagtttt 40058852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 52983682 - 52983815
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  52983682 cgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 52983781  T
Q  101 gaattagtcgattcttggatcggatatcgagttt 134  Q
    | |||||||||||||||||||||||| |||||||    
T  52983782 ggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 5609336 - 5609202
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||| | ||||||||||||| || || ||||| ||| |||    
T  5609336 cgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtggacggtgggattgatcccctc 5609237  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  5609236 ggattagtcgattcttggatcggataccgagtttt 5609202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 20566413 - 20566547
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||||| |   |||||||||||||||| || ||||||||| |||    
T  20566413 cgattccctctggtgccaatttcggtgggcaaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcgctgggattggtcccctc 20566512  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
      |||||||||||||||||||||||||||||||||    
T  20566513 agattagtcgattcttggatcggatatcgagtttt 20566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 44343577 - 44343711
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||| | | | |||||||||||||| || ||||||||| |||    
T  44343577 cgattccctctggtgctaattttggtgggctaagtccatacagagcttgctctgactttaaacggggctcccgcaagtgggcggtgggattggtcccctc 44343676  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||||||| |||||||| ||||||||    
T  44343677 gaattagtcgattcttgaatcggataccgagtttt 44343711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 45787838 - 45787704
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||| ||||||||||  ||||||||||||||| ||||||||||||| |||||||   | ||||||||||||| || || ||||||||| |||    
T  45787838 cgattccctctgatgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtggacggtgggattggtcccctc 45787739  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||||| ||||||||    
T  45787738 gaattagtcgattcttggatcggataccgagtttt 45787704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 9517775 - 9517648
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||| | | |||||||| ||||| | || ||||||||| |||    
T  9517775 cgattctctctggtgccaatttcagtgggctaagtccatacagagcttgctctgactttaaacggggcccccgcaggtgggtggtgagattggtcccctc 9517676  T
Q  101 gaattagtcgattcttggatcggatatc 128  Q
    | ||||||||||||||||||||||||||    
T  9517675 ggattagtcgattcttggatcggatatc 9517648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 25852277 - 25852412
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgacttt-aaatgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||| ||| | ||||| ||||||||||| ||| ||||||||| ||    
T  25852277 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaaacgggaccctcgcaagtgggcaatgggattggtcccct 25852376  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    || |||||||| |||||||| |||||| ||||||||    
T  25852377 cggattagtcggttcttggaccggataccgagtttt 25852412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 20078117 - 20077986
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    ||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||| ||||||||| || |||| || | ||||    
T  20078117 gattcccactggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgtaagtgggcggtgggattagttccctcg 20078018  T
Q  102 aattagtcgattcttggatcggatatcgagtt 133  Q
     |||||||||||||||||||||||| ||||||    
T  20078017 gattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 32990498 - 32990632
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| | |||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  32990498 cgattccctttagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 32990597  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | | |||||||||||||||||| |||  |||||||    
T  32990598 ggactagtcgattcttggatcgaatactgagtttt 32990632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 36131644 - 36131510
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| |||||||||||||| ||| ||||||||||| |||||||||| |||||||||| | |||||||| ||||||||| || ||||||||| |||    
T  36131644 cgattccctatggtgccaatttcggtggcctaagtccatacagagcttgctatgactttaaacgggacccccgtaagtgggcggtgggattggtcccctc 36131545  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||| || |||| |||| ||||||||    
T  36131544 ggattagtcgattattagatcagataccgagtttt 36131510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 54127474 - 54127342
Alignment:
Q  3 attccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcga 102  Q
    ||||||||| |||||||||||| ||||||||||| ||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| ||||     
T  54127474 attccctcttgtgccaatttcggtgggctaagtctatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 54127375  T
Q  103 attagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||| |||||||| ||||||  |||||||    
T  54127374 attagtcggttcttggaccggatactgagtttt 54127342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 46714459 - 46714590
Alignment:
Q  4 ttccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaa 103  Q
    |||||| |||||||||||||| ||||||||||||||| ||||||||| ||  ||||||| | | |||||||||||||||| || ||||||||| |||| |    
T  46714459 ttccctttggtgccaatttcggtgggctaagtccatacagagcttgcccttgctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgga 46714558  T
Q  104 ttagtcgattcttggatcggatatcgagtttt 135  Q
    |||||| ||||||| |||||||| ||||||||    
T  46714559 ttagtcaattcttgaatcggataccgagtttt 46714590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 12500191 - 12500059
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    |||||||||||||||||||||| |||||||||||||||| | ||||||||||| ||||||| | |||||||||||||||||| |   |||| | ||||||    
T  12500191 gattccctctggtgccaatttcaatgggctaagtccatacatagcttgctctggctttaaacgggacccccgcaagtgggcggtaaaattgat-ctctcg 12500093  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
     ||||||| ||||||||| |||||| ||||||||    
T  12500092 gattagtcaattcttggaccggataccgagtttt 12500059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 19660665 - 19660532
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    ||||| ||||| ||| ||||||| |||| |||||||||| ||||||||||||| |||||||   | |||||||||||||||| || ||||| ||| ||||    
T  19660665 gattctctctgatgcaaatttcggtgggataagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattgatcccctcg 19660566  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
     |||||||||||||||||||||||| ||||||||    
T  19660565 gattagtcgattcttggatcggataccgagtttt 19660532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 35229243 - 35229365
Alignment:
Q  14 tgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccg-caagtgggcgatgtgattggtcctctcgaattagtcgat 112  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||| | | |||||  |||||| ||| || ||||||||| |||||||||||||||    
T  35229243 tgccaatttcggtgggctaagtccatacatagcttgctctgactttaaacgggtccccccacaagtgagcggtgggattggtcccctcgaattagtcgat 35229342  T
Q  113 tcttggatcggatatcgagtttt 135  Q
    |||||||||||||| ||| ||||    
T  35229343 tcttggatcggataccgaatttt 35229365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 13584388 - 13584254
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| | | ||| | ||| || ||| ||  |||||||  |||    
T  13584388 cgattccctctggtgtcaatttcgatgggctaagtccatagagagcttgctctggctttaaacggggccctcacaaatgagcggtggaattggtctcctc 13584289  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||| |||||| |||| |||  |||||||    
T  13584288 gaattagtcggttcttgaatcgaatactgagtttt 13584254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 35674875 - 35674793
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcg 83  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||| ||||||| | | ||||||||||||||||    
T  35674875 cgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctgcctttaaacggggcccccgcaagtgggcg 35674793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 49287921 - 49288054
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||||||||||||||| ||||||||||||||| | |  ||||| || ||||||| | | | |||||||||||||| || ||||||||| |||    
T  49287921 cgattctctctggtgccaatttcggtgggctaagtccatacaaaatttgctatggctttaaacggg-ctcccgcaagtgggcgctgagattggtcccctc 49288019  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||||||||||| ||||  |||||||    
T  49288020 ggattagtcgattcttggatcagatactgagtttt 49288054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 12824464 - 12824597
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    |||||||||| ||| |||||| |||||||||||| ||||||||| |||||||  |||||||||   | || |||||||| || || ||||||||   |||    
T  12824464 gattccctcttgtgtcaattttgatgggctaagttcatatagagtttgctctagctttaaatggagctcctgcaagtggacggtgggattggtctcatcg 12824563  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||||  |||||||    
T  12824564 aattagtcgattcttggatcggatacggagtttt 12824597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 55961881 - 55961754
Alignment:
Q  7 cctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaatta 106  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | |  |||| |||||||||| || ||||||| |  ||| ||||    
T  55961881 cctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacg-gggccccacaagtgggcggtgggattggttccttcggatta 55961783  T
Q  107 gtcgattcttggatcggatatcgagtttt 135  Q
     |||||||||| |||| ||| ||| ||||    
T  55961782 atcgattcttgaatcgaataccgaatttt 55961754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 21387619 - 21387487
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| | ||| |||||| | ||||||||||| ||| ||||||||||||| ||||||| | || |||||||||||||||  |||  |||||| |||    
T  21387619 cgattccctatagtgtcaattttggtgggctaagtctatacagagcttgctctggctttaaacgggatccccgcaagtgggcg--gtgggtggtcccctc 21387522  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||| |||||||||||| | ||||||    
T  21387521 ggattagtcgattattggatcggataccaagtttt 21387487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 34835592 - 34835726
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaat-gcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    ||||||||||||||| |||||||| |||||||||||||||  |||||   |||| |||||||| | | |||||||||||||||| || ||||||||| ||    
T  34835592 cgattccctctggtgtcaatttcggtgggctaagtccatacggagctatgtctggctttaaatagggccccccgcaagtgggcg-tgagattggtcccct 34835690  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    || |||||||||||||| ||||| |||  |||||||    
T  34835691 cggattagtcgattcttagatcgaatactgagtttt 34835726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 51535676 - 51535818
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaa----gtccatatagagcttgc---tctgactttaaatgcgaccccc-gcaagtgggcgatgtgattg 92  Q
    |||||||||||||||||||||| | ||||||||    ||||||| |||||||||   |||| ||||||| | | ||||| ||||||||||| || |||||    
T  51535676 cgattccctctggtgccaattttggtgggctaattaagtccatacagagcttgcagctctggctttaaacggggcccccagcaagtgggcggtgggattg 51535775  T
Q  93 gtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||| ||||||||||||||||||| ||||||||| ||| ||||    
T  51535776 gtcccctcgaattagtcgattcttagatcggataccgaatttt 51535818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 18875650 - 18875517
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||| || |||||||| ||||||||||||||| ||||||||||||| ||||||| | | ||||| ||||||||   || ||||| ||| |||    
T  18875650 cgattccctctgatgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacg-ggcccccacaagtgggtagtgggattgatcccctc 18875552  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||| ||| ||||||| |||| ||||||||    
T  18875551 ggattagtcaatttttggatcagataccgagtttt 18875517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 22488146 - 22488028
Alignment:
Q  17 caatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattctt 116  Q
    |||||||| ||| |||||||||||||||||||| |||| ||||||| | | ||||||||| |||||| || ||||| ||| ||| ||||||||| | |||    
T  22488146 caatttcggtggactaagtccatatagagcttgttctggctttaaacggggcccccgcaaatgggcggtgggattgatcccctcaaattagtcggtcctt 22488047  T
Q  117 ggatcggatatcgagtttt 135  Q
    |||||||||| | ||||||    
T  22488046 ggatcggataccaagtttt 22488028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 33992689 - 33992771
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcg 83  Q
    |||||| ||||||||||||||||| ||||||||||||||| | ||||||||||| ||||||| | | ||||||||||||||||    
T  33992689 cgattctctctggtgccaatttcggtgggctaagtccatacatagcttgctctggctttaaacggggcccccgcaagtgggcg 33992771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 4911985 - 4912123
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgct----ctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcc 96  Q
    |||||||||||||||  ||||| | ||| ||| ||||||||||||||||||    ||| ||||||| |   |||||||||||||| | |||||||| |||    
T  4911985 cgattccctctggtgttaattttggtggcctatgtccatatagagcttgcttgctctggctttaaacggagcccccgcaagtgggtggtgtgattgatcc 4912084  T
Q  97 tctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
     | |||||||||||||||||||||| |||| ||||||||    
T  4912085 ccccgaattagtcgattcttggatcagataccgagtttt 4912123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 51595094 - 51595219
Alignment:
Q  10 ctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtc 109  Q
    ||||||||||||||||||| |||| || ||| ||| ||||||||||||||||| | || |||||||||||| || ||  |||| ||   ||| |||| ||    
T  51595094 ctggtgccaatttcgatggactaaatcaatagagaacttgctctgactttaaacgggatccccgcaagtggacggtggaattgatctcttcggattaatc 51595193  T
Q  110 gattcttggatcggatatcgagtttt 135  Q
    ||||||||||||||||| ||||||||    
T  51595194 gattcttggatcggataccgagtttt 51595219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 25969633 - 25969512
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    ||||||| ||||||||||||||| ||| | ||||||||| ||| ||||||||| ||||||| | | |||||| ||||| ||| || ||||||||| ||||    
T  25969633 gattccccctggtgccaatttcggtggcc-aagtccatacagaacttgctctggctttaaacggg-cccccgtaagtgagcggtgggattggtcc-ctcg 25969537  T
Q  102 aattagtcgattcttggatcggata 126  Q
    |||||||||||||||| ||||||||    
T  25969536 aattagtcgattcttgaatcggata 25969512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 29875899 - 29875827
Alignment:
Q  11 tggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcg 83  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||||||||||  |||||||||||| ||||    
T  29875899 tggtgccaatttcggtgggctaagtccatacagagcttgttctgactttaaatggaacccccgcaagttggcg 29875827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 13550273 - 13550392
Alignment:
Q  3 attccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcga 102  Q
    ||||||||| |||||||||||| |||||||||||||||  |||||| ||||| ||||||| | |  |||| |||||||||| |  ||| ||||| ||||     
T  13550273 attccctctagtgccaatttcggtgggctaagtccataccgagcttactctggctttaaacggggtccccacaagtgggcggtaggataggtcccctcgg 13550372  T
Q  103 attagtcgattcttggatcg 122  Q
    |||| |||||||||||||||    
T  13550373 attaatcgattcttggatcg 13550392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 27574396 - 27574515
Alignment:
Q  16 ccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattct 115  Q
    ||||||||| | |||||| | |||| ||||||||||||| ||||||| | | |||||||||||||||| || | ||||||| |||| |||| || |||||    
T  27574396 ccaatttcggtaggctaaattcatacagagcttgctctggctttaaaaggggcccccgcaagtgggcggtgagtttggtcccctcggattaatcaattct 27574495  T
Q  116 tggatcggatatcgagtttt 135  Q
    |||||||||||  |||||||    
T  27574496 tggatcggatactgagtttt 27574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 32942433 - 32942552
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||| ||||||||||| ||||||||||||||| ||||||| ||||| ||||||| |   ||||| ||||||| || || ||||||||| |||    
T  32942433 cgattctctctgatgccaatttcggtgggctaagtccatacagagcttactctggctttaaacggcccccccacaagtggacggtgggattggtcccctc 32942532  T
Q  101 gaattagtcgattcttggat 120  Q
    | || | |||||||||||||    
T  32942533 ggataaatcgattcttggat 32942552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 7392097 - 7391965
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| |||||||||||||| | || |||||||||| |||| |||||||| ||||||||| |||||||   |||||||| || ||||| ||| |||    
T  7392097 cgattccctatggtgccaatttcggt-ggttaagtccatacagagtttgctctggctttaaatgggaccccc-atagtgggcggtgggattgttcccctc 7392000  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||| ||||| ||| ||||| ||||||||    
T  7391999 ggattagtcggttcttcgattggataccgagtttt 7391965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 52494623 - 52494685
Alignment:
Q  73 gcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||| || ||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  52494623 gcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 52494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 13771617 - 13771482
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagct-tgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    |||||||||||| || |||| ||| |||||||||||||||   |||| ||||||| ||||||| | | | |||||||||||  |||| ||||||||| ||    
T  13771617 cgattccctctgatgtcaatctcggtgggctaagtccatacgaagctatgctctggctttaaacggggctcccgcaagtggatgatgagattggtcccct 13771518  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
      ||||||||| ||||||||||||||| ||| ||||    
T  13771517 ataattagtcggttcttggatcggataccgaatttt 13771482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 1985899 - 1986031
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||    ||||| ||||||| |   ||||| |||||||||| ||  |||||| || ||    
T  1985899 cgattccctttggtgcgaatttcgatgggctaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtggaattggt-ctatc 1985997  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||| ||||| ||||||||    
T  1985998 ggattagtcgattcttggat-ggataccgagtttt 1986031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 22625204 - 22625100
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagctt---------gctctgactttaaatgcgacccccgcaagtgggcgatgtgatt 91  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||||         |||||| ||||||||| | |||||||||||||||| || ||||    
T  22625204 cgattccctctggagccaatttcggtgggctaagtccatacagagcttgctcagccagctctgcctttaaatggggcccccgcaagtgggcggtgggatt 22625105  T
Q  92 ggtcc 96  Q
    |||||    
T  22625104 ggtcc 22625100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 4064990 - 4065057
Alignment:
Q  68 cccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||| |||||||||| || ||||||||| |||| ||||||||||| |||||||||||||||| ||||    
T  4064990 cccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggatatcgaatttt 4065057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 20527166 - 20527119
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttg 49  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  20527166 gattccctctggcgccaatttcggtgggctaagtccatatagagcttg 20527119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 135
Target Start/End: Original strand, 23639758 - 23639821
Alignment:
Q  72 cgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||| || || ||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  23639758 cgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 135
Target Start/End: Original strand, 23645416 - 23645479
Alignment:
Q  72 cgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||| || || ||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  23645416 cgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 43719154 - 43719087
Alignment:
Q  68 cccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||| ||||||||| || |||||||| ||||| |||||||||||||||||||||||| ||| ||||    
T  43719154 cccccgaaagtgggcggtgggattggtcatctcggattagtcgattcttggatcggataccgaatttt 43719087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 23131497 - 23131436
Alignment:
Q  74 caagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||| |  ||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  23131497 caagtgggcggtaggattggtcccctcgaattagtcgattcttcgatcggataccgagtttt 23131436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 30879298 - 30879166
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    |||||||||||||||||||||||||||| ||| |||||| | || |||||||| ||||||| | |   || |||||||| || || ||||||| | |||     
T  30879298 gattccctctggtgccaatttcgatgggttaaatccatacaaagtttgctctggctttaaa-gggggtcctgcaagtggacggtgggattggttccctca 30879200  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
     |||| |||||||||||||| |||| ||| ||||    
T  30879199 gattaatcgattcttggatcagataccgaatttt 30879166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 7093508 - 7093568
Alignment:
Q  75 aagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||| || |||||||||  |||||||||||| | ||||||||||||||||||||||    
T  7093508 aagtgggcggtgggattggtcccttcgaattagtcggtccttggatcggatatcgagtttt 7093568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 9978585 - 9978509
Alignment:
Q  59 taaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||| | |||||||||||||||| || |||||||||  ||| |||||| ||||||| ||||||||| ||||||||    
T  9978585 taaatgggtcccccgcaagtgggcggtgggattggtcccatcggattagttgattcttagatcggataccgagtttt 9978509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 13873429 - 13873317
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| | |||||||| |||| |||| |||||||  ||| |||   | |||||||||||||| | ||  |||| ||||||     
T  13873429 cgattccctctggtgccaatttcggtaggctaagttcatacagagtttgctctagcttcaaacagggcccccgcaagtgggtggtggaattgatcctctg 13873330  T
Q  101 gaattagtcgatt 113  Q
    | |||||||||||    
T  13873329 ggattagtcgatt 13873317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 13781125 - 13781183
Alignment:
Q  77 gtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||| ||||| ||||||||| ||||||||| |||||||||| |||||||||||| ||||    
T  13781125 gtggacgatgagattggtcccctcgaattaatcgattcttgaatcggatatcgaatttt 13781183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 28791250 - 28791311
Alignment:
Q  74 caagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||| || ||||||| || |||||||||||| | |||| |||||||||||||||||    
T  28791250 caagtgggcggtgagattggttctttcgaattagtcggtccttgaatcggatatcgagtttt 28791311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 37302623 - 37302684
Alignment:
Q  74 caagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||| |||||||||  ||| ||||||||||||||| |||||||| ||| ||||    
T  37302623 caagtgggcgatgggattggtcccttcggattagtcgattcttgaatcggataccgaatttt 37302684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41085089 - 41085204
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagctt-gctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    |||||| ||||| |||| |||||||||| | ||||||||||||||||| |||||  |||||| || | || | || ||||| || || ||||||||||||    
T  41085089 cgattctctctgatgccgatttcgatggac-aagtccatatagagctttgctctagctttaagtgag-ccactgctagtggacggtgggattggtcctct 41085186  T
Q  100 cgaattagtcgattcttg 117  Q
    ||||||||| ||||||||    
T  41085187 cgaattagtggattcttg 41085204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 4585808 - 4585732
Alignment:
Q  38 atatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattctt 116  Q
    |||| ||||||||| || ||||||| | | |||||||||||||||| || |||||||||| ||| ||||||||||||||    
T  4585808 atatggagcttgctttggctttaaacggg-cccccgcaagtgggcggtg-gattggtcctttcggattagtcgattctt 4585732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 55158409 - 55158343
Alignment:
Q  69 ccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||| |||| | || ||||||||| |||| ||||||||||| |||||||||| | ||||||||    
T  55158409 ccccgcaaatgggtggtgggattggtcccctcggattagtcgatttttggatcggaaaccgagtttt 55158343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 135
Target Start/End: Original strand, 13017841 - 13017909
Alignment:
Q  66 gacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||  || ||||||||| |||| |||||||| | |||||||| |||| ||||||||    
T  13017841 gacccccgcaagtgggcagtgggattggtccactcggattagtcggtccttggatc-gataccgagtttt 13017909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 17637912 - 17637852
Alignment:
Q  74 caagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||| ||  |||||||| |||| |||||||||||||| ||||||||| ||||||||    
T  17637912 caagtgggcggtgatattggtcccctcggattagtcgattctt-gatcggataccgagtttt 17637852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 24672338 - 24672305
Alignment:
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||||||||||||||| ||||||||    
T  24672338 aattagtcgattcttggatcggataccgagtttt 24672305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 33289190 - 33289251
Alignment:
Q  74 caagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||| || || |||| |||| |||| |||||||||||||||||||||||| || |||||    
T  33289190 caagtggacggtgagattagtcccctcggattagtcgattcttggatcggataccgggtttt 33289251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 135
Target Start/End: Original strand, 40252401 - 40252486
Alignment:
Q  50 ctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||| ||||||||| | | |||||||||||||| || ||||||||  ||| ||||||||| || || ||||| |||| |||||||    
T  40252401 ctctggctttaaatgggtcacccgcaagtgggcggtgagattggtctcctcaaattagtcggtttttagatcgaatattgagtttt 40252486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37455640 - 37455702
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagag-cttgctctgactttaaatg 64  Q
    |||||||| |||||||||||||| ||||||||| |||||||||||  |||||||| |||||||||    
T  37455640 cgattccc-ctggtgccaatttcaatgggctaa-tccatatagagatttgctctggctttaaatg 37455702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 42508466 - 42508406
Alignment:
Q  50 ctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcg 110  Q
    ||||||||||||||| | ||||| |||||||||| |   |||||||| |||||||||||||    
T  42508466 ctctgactttaaatgggccccccacaagtgggcggttgaattggtcccctcgaattagtcg 42508406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 53787177 - 53787057
Alignment:
Q  16 ccaatttcgatgggctaagtccatatagagct-tgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattc 114  Q
    ||||||||| ||||||||||||||   ||||| ||||||| ||||||| |   ||||||||| |||||| || |||| |||| |||  |||||||| ||     
T  53787177 ccaatttcggtgggctaagtccatgcggagctatgctctggctttaaacggagcccccgcaaatgggcggtgggattagtcccctcagattagtcggttt 53787078  T
Q  115 ttggatcggatatcgagtttt 135  Q
    |||||||| ||| || |||||    
T  53787077 ttggatcgaataccgggtttt 53787057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 20305975 - 20306109
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | |||||||||||||||||| || ||||||||| |||    
T  20305975 cgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctc 20306074  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||| ||||||||||||| ||||||||    
T  20306075 gaattagtcgatccttggatcggataccgagtttt 20306109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 21092608 - 21092742
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | |||||||||||||||||| || ||||||||| |||    
T  21092608 cgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctc 21092707  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||| ||||||||||||| ||||||||    
T  21092708 gaattagtcgatccttggatcggataccgagtttt 21092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 4718712 - 4718846
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  4718712 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 4718811  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  4718812 ggattagtcgattcttggatcggataccgagtttt 4718846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 8765660 - 8765526
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | | | |||||||||||||| || ||||||||| |||    
T  8765660 cgattccctctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctc 8765561  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  8765560 ggattagtcgattcttggatcggataccgagtttt 8765526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 15259540 - 15259407
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| ||| |||||||| |||    
T  15259540 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgtaattggtcccctc 15259441  T
Q  101 gaattagtcgattcttggatcggatatcgagttt 134  Q
    |||||||||||||||||||||||||  |||||||    
T  15259440 gaattagtcgattcttggatcggatgccgagttt 15259407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 34237789 - 34237655
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||| ||| || ||||||||| |||    
T  34237789 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgagcggtgggattggtcccctc 34237690  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  34237689 ggattagtcgattcttggatcggataccgagtttt 34237655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 42328072 - 42328205
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | ||||| ||||||| ||||| ||||||||| ||||    
T  42328072 gattccctctgttgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtggacgatgggattggtcccctcg 42328171  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||||||||||||||| ||||||||    
T  42328172 aattagtcgattcttggatcggataccgagtttt 42328205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 3734757 - 3734623
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | ||||||||| |||||  || ||||||||| |||    
T  3734757 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcagtgggattggtcccctc 3734658  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  3734657 ggattagtcgattcttggatcggataccgagtttt 3734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 21603297 - 21603431
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  21603297 cgattccctatggtgccaatttcggtgggctaagcccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 21603396  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  21603397 ggattagtcgattcttggatcggataccgagtttt 21603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 39349323 - 39349457
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||| ||| |||    
T  39349323 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctc 39349422  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| | ||||||    
T  39349423 ggattagtcgattcttggatcggataccaagtttt 39349457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 2618253 - 2618387
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||||| |   |||||||||||||||| || ||||||||| |||    
T  2618253 cgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcggtgggattggtcccctc 2618352  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||  ||||||||    
T  2618353 ggattagtcgattcttggatcggattccgagtttt 2618387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 19471677 - 19471811
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccc-cgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||||||||| | || |||||||||||| ||||||||||||| ||||||| | | |||| ||||||||||||||| ||||||||| |||    
T  19471677 gattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctc 19471776  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||| ||||||||||||| ||||||||    
T  19471777 gaattagtcgatacttggatcggataccgagtttt 19471811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 19542601 - 19542735
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccc-cgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||||||||| | || |||||||||||| ||||||||||||| ||||||| | | |||| ||||||||||||||| ||||||||| |||    
T  19542601 gattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctc 19542700  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||| ||||||||||||| ||||||||    
T  19542701 gaattagtcgatacttggatcggataccgagtttt 19542735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 19590095 - 19589961
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgaccccc-gcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||||||||| | || |||||||||||| ||||||||||||| ||||||| | | ||||| |||||||||||||| ||||||||| |||    
T  19590095 gattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctc 19589996  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||| ||||||||||||| ||||||||    
T  19589995 gaattagtcgatacttggatcggataccgagtttt 19589961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 32879346 - 32879480
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||||| | | ||||| |||||||||| || ||||||||| |||    
T  32879346 cgattccctctggtgccaatttcggtgggctaagttcatacagagcttgctctgacattaaacggggcccccacaagtgggcggtgggattggtcccctc 32879445  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||| ||||| ||||||||    
T  32879446 ggattagtcgattcttggattggataccgagtttt 32879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 28193541 - 28193674
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||| | | ||||  |||||||||| || ||||||||| |||    
T  28193541 cgattccctctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaacggggcccctacaagtgggcggtgggattggtcccctc 28193640  T
Q  101 gaattagtcgattcttggatcggatatcgagttt 134  Q
    | |||||||||||||||||||||||| |||||||    
T  28193641 ggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 6953141 - 6953008
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||   | ||||||||||| |||| || ||||||||| |||    
T  6953141 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagttggcggtgggattggtcc-ctc 6953043  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||| ||| ||||||||    
T  6953042 ggattagtcgattcttggatcgaataccgagtttt 6953008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 42643252 - 42643118
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||| ||| | |  ||||||||||||||| || ||||||||| |||    
T  42643252 cgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctgtcttgaaacgggggccccgcaagtgggcggtgggattggtcccctc 42643153  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||| ||||||||||||||||| ||||||||    
T  42643152 gcattagttgattcttggatcggataccgagtttt 42643118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 34610821 - 34610687
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||| ||||||||||| ||| ||||||| ||| ||||||||||||| ||||||| | | ||| |||||||||||| |   |||||||| |||    
T  34610821 cgattccctctgatgccaatttcggtggtctaagtctatacagagcttgctctggctttaaacgagcccctcgcaagtgggcggtagaattggtcccctc 34610722  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||||| ||||||||    
T  34610721 gaattagtcgattcttggatcggataccgagtttt 34610687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 28088353 - 28088479
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| ||||| |||||||| |||| |||||||||| ||||||||||||||||||||||| | || ||||||||||||| || ||||| ||| |||    
T  28088353 cgattccctttggtgtcaatttcggtgggttaagtccatacagagcttgctctgactttaaatggggcctccgcaagtgggcggtgggattgatcccctc 28088452  T
Q  101 gaattagtcgattcttggatcggatat 127  Q
      | |||||||||||||||||||||||    
T  28088453 agaatagtcgattcttggatcggatat 28088479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 264533 - 264400
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||| |||||||||||| ||||||||||| ||| | ||||||||||| ||||||| | | ||||| ||| |||||| || ||||| ||| |||    
T  264533 cgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaacg-ggcccccacaaatgggcggtgagattgatcccctc 264435  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||||| ||| ||||    
T  264434 gaattagtcgattcttggatcggataccgaatttt 264400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 651388 - 651521
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||| |||||||||||| ||||||||||| ||| | ||||||||||| ||||||| | | ||||| ||| |||||| || ||||| ||| |||    
T  651388 cgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaacg-ggcccccacaaatgggcggtgagattgatcccctc 651486  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||||| ||| ||||    
T  651487 gaattagtcgattcttggatcggataccgaatttt 651521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 837123 - 837256
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||| |||||||||||| ||||||||||| ||| | ||||||||||| ||||||| | | ||||| ||| |||||| || ||||| ||| |||    
T  837123 cgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaacg-ggcccccacaaatgggcggtgagattgatcccctc 837221  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||||| ||| ||||    
T  837222 gaattagtcgattcttggatcggataccgaatttt 837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 4698857 - 4698723
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||| |||||||| ||||||||||||||  ||| ||||||||| ||||||| |   |||||||||||| ||| || ||||||||| |||    
T  4698857 cgattccctctggtgtcaatttcggtgggctaagtccatgaagaacttgctctggctttaaacggagcccccgcaagtgagcggtgggattggtcccctc 4698758  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||| ||||| ||||| ||||||||    
T  4698757 ggattagtcgattcatggattggataccgagtttt 4698723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 20469984 - 20470117
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||| | |||||||| ||||||||||||||||| ||||||||||||| |||||||     |||||||||||||||| || ||||||| | |||    
T  20469984 cgattccctctagagccaatttagatgggctaagtccatacagagcttgctctggctttaaacagagcccccgcaagtgggcggtgggattggttc-ctc 20470082  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||| |||||||||||| ||||||||    
T  20470083 ggattagtcgatttttggatcggataccgagtttt 20470117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 18128580 - 18128714
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagctt-gctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    |||||| ||||||||||||||||| ||||| || |||||| ||||||| |||||| ||||||| | | |||||||||||||||| || ||||||||||||    
T  18128580 cgattctctctggtgccaatttcggtgggcgaa-tccataaagagctttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctct 18128678  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |  |||||||| ||||||||||| ||| ||||||||    
T  18128679 cagattagtcggttcttggatcgaataccgagtttt 18128714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 27746469 - 27746335
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagt-gggcgatgtgattggtcctct 99  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | |  |||| ||||| ||||||||  ||| |||| ||    
T  27746469 cgattccctttggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaaag-gggccccacaagtggggcgatggaattagtcccct 27746371  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    || |||||||||||||||||||| ||||||| ||||    
T  27746370 cggattagtcgattcttggatcgaatatcgattttt 27746335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 14633021 - 14633155
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||| || |   |  || |||||||||| || ||||||||| ||     
T  14633021 cgattccctctggtgccaatttcggtgggctaagtctatacagagcttgctctggctttgaacggagcgtccacaagtgggcggtgggattggtcccctt 14633120  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| | ||||||    
T  14633121 ggattagtcgattcttggatcggataccaagtttt 14633155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 28964100 - 28964233
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||| |||||||||||||||| |||||||||||||||  |||||   |||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  28964100 cgattccatctggtgccaatttcggtgggctaagtccatacggagctatgtctggctttaaacggggcccccgcaagtgggcg-tgggattggtcccctc 28964198  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||| ||||| |||  |||||||    
T  28964199 gaattagtcgattcttagatcgaatactgagtttt 28964233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 24999301 - 24999394
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggt 94  Q
    |||||||||||| ||||||||| |||||||||||| |||||||||||||||||| ||||||| | | |||||||||||||||| || |||||||    
T  24999301 cgattccctctgatgccaattttgatgggctaagttcatatagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt 24999394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 24018465 - 24018584
Alignment:
Q  17 caatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgac-ccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattct 115  Q
    |||||||  ||||||||||||||| ||||||||||||| ||||||| | | | |||| |||||||||| || ||||||||| || |||||||||| ||||    
T  24018465 caatttcagtgggctaagtccatacagagcttgctctggctttaaacgggcctccccacaagtgggcggtgagattggtccccttgaattagtcggttct 24018564  T
Q  116 tggatcggatatcgagtttt 135  Q
    |||| |||||||||||||||    
T  24018565 tggaccggatatcgagtttt 24018584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 2639499 - 2639411
Alignment:
Q  47 ttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||| ||||||| | | |||||||||||||||| || ||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  2639499 ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 2639411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 2166766 - 2166897
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||  |||||||||||  | ||||||||||||| ||||||||||||| ||||||||  || ||||||||||||||| || ||||||||| |||    
T  2166766 cgattccctc--gtgccaatttcagtaggctaagtccatacagagcttgctctggctttaaataaga-ccccgcaagtgggcggtgggattggtcccctc 2166862  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
      ||||||||||| || ||| ||||| ||||||||    
T  2166863 agattagtcgattttttgattggataccgagtttt 2166897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 10292122 - 10292255
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||| ||||||||||  |||||| |||||||  |||| |||||||| ||||||| | | ||||| |||||||||| || |||||||||  ||    
T  10292122 cgattccctctgatgccaatttcagtgggctgagtccatc-agagattgctctggctttaaacggggcccccacaagtgggcggtgggattggtcccttc 10292220  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||| ||||||||||||| ||| ||||||||    
T  10292221 ggattagttgattcttggatcgaataccgagtttt 10292255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 25248416 - 25248547
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||| |||||||| | ||||||||| ||| |||| |||||||| ||||||| | | ||| |||||||||||| || ||||||||| |||    
T  25248416 cgattccctctggtgtcaatttcggtaggctaagtc-atacagagtttgctctggctttaaacggg-ccctcgcaagtgggcggtgggattggtcccctc 25248513  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||| || ||||||||| ||||||||    
T  25248514 ggattagtcgatt-tttgatcggataccgagtttt 25248547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 26168969 - 26168862
Alignment:
Q  14 tgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgatt 113  Q
    ||||||||||| ||||| |||| |||| |||||||| |||| ||||||||| | ||| |||||||||| |||| ||||||||| |||| | |||||||||    
T  26168969 tgccaatttcggtgggc-aagttcatacagagcttgttctggctttaaatgagcccctcgcaagtgggggatgagattggtcccctcggagtagtcgatt 26168871  T
Q  114 cttggatcg 122  Q
    |||||||||    
T  26168870 cttggatcg 26168862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 7558077 - 7557952
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||| |||||||||||||||| | ||||||||||||       ||||| |||| ||||||| | ||||||||||||||| || || ||||||||| |||    
T  7558077 cgatttcctctggtgccaattttggtgggctaagtcc-------gcttgttctggctttaaacg-gacccccgcaagtggacggtgggattggtcccctc 7557986  T
Q  101 gaattagtcgattcttggatcggatatcgagttt 134  Q
    ||||||||||||| ||| |||||||| |||||||    
T  7557985 gaattagtcgatttttgcatcggataccgagttt 7557952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 36848877 - 36848759
Alignment:
Q  7 cctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaatta 106  Q
    |||||||||||||||||| |||||||||||||||  ||| |||||| | ||||||||| |  | || |||||||||| || |||| |||| ||| |||||    
T  36848877 cctctggtgccaatttcggtgggctaagtccatacggagtttgctcgggctttaaatgag-gcaccacaagtgggcggtgggattagtcccctcaaatta 36848779  T
Q  107 gtcgattcttggatcggata 126  Q
    |||| || ||||||||||||    
T  36848778 gtcggtttttggatcggata 36848759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 18532174 - 18532299
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||| | || |||||||| ||||||||||||||| ||| |||||||||  |||||| | | |||| ||||||||||| || ||||||           
T  18532174 cgattccctcagatgtcaatttcggtgggctaagtccatacagaacttgctctggatttaaacggggcccctgcaagtgggcggtgagattgg------- 18532266  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
      |||||||||||||||||||||||| ||||||||    
T  18532267 --attagtcgattcttggatcggataccgagtttt 18532299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 9047411 - 9047279
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    ||||||||||  ||||||||| | ||| ||||||||||| | ||||| ||||||||||||| |  ||||||||| |||| |  ||  |||||||| || |    
T  9047411 gattccctctaatgccaattttggtggactaagtccatacaaagcttactctgactttaaacggaacccccgcatgtggacagtggaattggtcc-cttg 9047313  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||| ||||||||||||||| ||| ||||    
T  9047312 aattagtcggttcttggatcggataccgaatttt 9047279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 21667617 - 21667731
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||| ||| |||||| ||||||| ||||||||||||||| ||||||||||||| ||||||| |   |  ||||||||||||| ||  |||||||| |||    
T  21667617 cgatttcctttggtgctaatttcggtgggctaagtccatacagagcttgctctgcctttaaacggagcatccgcaagtgggcggtggaattggtcc-ctc 21667715  T
Q  101 gaattagtcgattctt 116  Q
      ||||||||||||||    
T  21667716 agattagtcgattctt 21667731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 28908892 - 28909012
Alignment:
Q  3 attccctctggtgccaatttcgatgggctaagtccatatagagctt-gctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    ||||||||||||| ||||| |  ||||| ||||||||| ||||||| | |||| ||||||| | | | ||||||||||||||||||||||| ||| |||     
T  28908892 attccctctggtgtcaattacagtgggc-aagtccatacagagctttgttctggctttaaacggggctcccgcaagtgggcgatgtgattgatcccctca 28908990  T
Q  102 aattagtcgattcttggatcgg 123  Q
     |||||||| | ||||||||||    
T  28908991 gattagtcggtccttggatcgg 28909012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 43817851 - 43817759
Alignment:
Q  33 agtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggat 125  Q
    ||||||||||||| | |||||  |||||||   |||||||||||||||||| ||  |||||||  ||| ||||| ||||||||||||||||||    
T  43817851 agtccatatagagttcgctctagctttaaacaggacccccgcaagtgggcggtggaattggtctcctcaaattaatcgattcttggatcggat 43817759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 9713604 - 9713655
Alignment:
Q  84 atgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||| |||||||| |||| |||||||||||||||||||||||| ||||||||    
T  9713604 atgttattggtccactcggattagtcgattcttggatcggataccgagtttt 9713655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 33747016 - 33747083
Alignment:
Q  68 cccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||| || ||  |||||| |||||| |||||||||| ||||||||||||| ||||||||    
T  33747016 cccccgcaagtggacggtggaattggttctctcggattagtcgatccttggatcggataccgagtttt 33747083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 1219416 - 1219550
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||| |  |||||||  ||||||||||||||| |||  ||| |||| ||||||| | | |||||  ||||||||| |  ||| |||||  ||    
T  1219416 cgattccctctgatatcaatttcagtgggctaagtccatacagaatttgttctggctttaaacggggcccccataagtgggcggtaggatcggtcccttc 1219515  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||| ||||| ||| ||| ||||    
T  1219516 ggattagtcgattcttagatcgaataccgaatttt 1219550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 21835218 - 21835352
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  21835218 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 21835317  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||||||||||||    
T  21835318 ggattagtcgattcttggatcggatatcgagtttt 21835352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 17197084 - 17196950
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  17197084 cgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 17196985  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||||| ||||||||    
T  17196984 gaattagtcgattcttggatcggataccgagtttt 17196950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 22119955 - 22120089
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  22119955 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 22120054  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  22120055 ggattagtcgattcttggatcggataccgagtttt 22120089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 40543044 - 40542910
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  40543044 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 40542945  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  40542944 ggattagtcgattcttggatcggataccgagtttt 40542910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 2751338 - 2751472
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | ||||||||| |||||| || ||||||||| |||    
T  2751338 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctc 2751437  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  2751438 ggattagtcgattcttggatcggataccgagtttt 2751472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 7175996 - 7175862
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||   |||||||||||||||||| || ||||||||| |||    
T  7175996 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacaggacccccgcaagtgggcggtgggattggtcccctc 7175897  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||||||||||||||||  |||||||    
T  7175896 ggattagtcgattcttggatcggatactgagtttt 7175862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 7275344 - 7275478
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||   | |||||||||||||||| || ||||||||| |||    
T  7275344 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctc 7275443  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  7275444 ggattagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 654838 - 654705
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  654838 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacg-ggcccccgcaagtgggcggtgggattggtcccctc 654740  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||| ||||||||||||||| ||||||||    
T  654739 ggattagtcggttcttggatcggataccgagtttt 654705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 11997916 - 11998050
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| | ||||||||||||| | ||||||||||| |||||||   | |||||||||||||||| || ||||||||| |||    
T  11997916 cgattccctctggtgccaatttcggttggctaagtccatacatagcttgctctggctttaaactgggcccccgcaagtgggcggtgggattggtcccctc 11998015  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||||| ||||||||    
T  11998016 gaattagtcgattcttggatcggataccgagtttt 11998050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 29861737 - 29861871
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||| | | |||||||||||||||| || ||||| ||| |||    
T  29861737 cgattccctctggtgccaatttcggtgggctaagtccatacagaacttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctc 29861836  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||| ||||||||| ||||||||    
T  29861837 gaattagtcgattcttagatcggataccgagtttt 29861871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 22703553 - 22703687
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||| | |||||||||||||||||| || ||||||||| |||    
T  22703553 cgattccctctggtgtcaatttcggtgggctaagtccatacaaagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctc 22703652  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||| ||||||||| | ||||||    
T  22703653 ggattagtcgattctttgatcggatacccagtttt 22703687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 2103122 - 2103254
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||| | |||||||||||||||| || ||||||||| |||    
T  2103122 cgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtgggcggtgggattggtcc-ctc 2103220  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||| | ||||||||| ||||||||    
T  2103221 ggattagtcgattcat-gatcggataccgagtttt 2103254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 3851840 - 3851958
Alignment:
Q  17 caatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattctt 116  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||| | | |||||||||||||||| || ||||| ||| |||| ||||||||||||||    
T  3851840 caatttcggtgggctaagtccatatagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattctt 3851939  T
Q  117 ggatcggatatcgagtttt 135  Q
    |||||||||| ||||||||    
T  3851940 ggatcggataccgagtttt 3851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 23092167 - 23092297
Alignment:
Q  5 tccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaat 104  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | ||||||||| ||| || || ||||||||| |||| ||    
T  23092167 tccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatggacggtgggattggtcccctcggat 23092266  T
Q  105 tagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||| ||||||||||| ||||||||    
T  23092267 tagtcgattcatggatcggataccgagtttt 23092297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 23012641 - 23012508
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    |||||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||||| | ||||| |||||||||| || ||||||||| ||||    
T  23012641 gattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccacaagtgggcggtgggattggtcccctcg 23012542  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
     ||||||| |||| | ||||||||| ||||||||    
T  23012541 tattagtcaattcattgatcggataccgagtttt 23012508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 28089883 - 28090020
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatata----gagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcc 96  Q
    |||| |||||||||| |||||||| ||||||||||||||| |    |||||||||||| ||||||||| | ||||||||||||||||||| |||||||||    
T  28089883 cgataccctctggtgtcaatttcggtgggctaagtccatacaaagtgagcttgctctggctttaaatggg-cccccgcaagtgggcgatgagattggtcc 28089981  T
Q  97 tctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
     |||| |||||||||||||||||||||||| ||||||||    
T  28089982 cctcggattagtcgattcttggatcggataccgagtttt 28090020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 27009426 - 27009561
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgc-aagtgggcgatgtgattggtcctct 99  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | | |||| || |||||| || || ||||||||| ||    
T  27009426 cgatcccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacggggcccctgcaaagtggacggtgggattggtcccct 27009525  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||||||||||| ||||| ||||||||    
T  27009526 caaattagtcgattcttggattggataccgagtttt 27009561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 10091255 - 10091388
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||| |  ||||||||||||||| || ||||| ||| |||    
T  10091255 cgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggtccccgcaagtgggcggtgggattgatcccctc 10091354  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||| |||| |||| ||||||||    
T  10091355 ggattagtcgattctt-gatccgataccgagtttt 10091388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 16374061 - 16374195
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| |||  ||||| || ||||||| | ||||||||||| ||| || || ||||||||| |||    
T  16374061 cgattccctctggtgccaatttcggtgggttaagtccatacagaatttgctatggctttaaacgggacccccgcaaatggacggtgggattggtcccctc 16374160  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  16374161 ggattagtcgattcttggatcggataccgagtttt 16374195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 18044174 - 18044308
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | ||||| |||||||| | ||  |||||||| |||    
T  18044174 cgattccctcttgtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtgggtggtggaattggtcccctc 18044273  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
      |||||||||||||||||||||||| ||||||||    
T  18044274 agattagtcgattcttggatcggataccgagtttt 18044308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 21217967 - 21217833
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||||||  ||||||| | | ||||| |||||||||| || ||||| ||| |||    
T  21217967 cgattccctctgatgccaatttcggtgggctaagtccatacagagcttgctctagctttaaacgggccccccacaagtgggcggtgggattgatcccctc 21217868  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||| ||||||||||||||||| ||||||||    
T  21217867 ggattagttgattcttggatcggataccgagtttt 21217833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 27312219 - 27312353
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||| ||||||||||||||| || ||||||||| ||||||  ||||||||||||| |   |||||||||||||||| || ||||||||| |||    
T  27312219 cgattccctctagtgccaatttcgatgtgccaagtccatacagagctacctctgactttaaacggagcccccgcaagtgggcggtgggattggtcccctc 27312318  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
      |||||||||||||||||||||||| ||||||||    
T  27312319 agattagtcgattcttggatcggataccgagtttt 27312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 28950942 - 28951072
Alignment:
Q  5 tccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaat 104  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| | | ||| ||||||| |||| || ||||||||| ||||||     
T  28950942 tccctctggtgccaatttcggtgggctaagttcatatagagcttgctctggctttaaacgggtccctcgcaagtcggcggtgggattggtcccctcgaac 28951041  T
Q  105 tagtcgattcttggatcggatatcgagtttt 135  Q
    ||| | |||||||||||||||| ||||||||    
T  28951042 tagacaattcttggatcggataccgagtttt 28951072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 19421306 - 19421431
Alignment:
Q  9 tctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagt 108  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | | ||| |||||||||| || ||||||||  |||| ||||||    
T  19421306 tctggtgtcaatttcgatgggctaagtccatacagagcttgctctgactttaaatggggcgcccacaagtgggcggtgggattggtctcctcggattagt 19421405  T
Q  109 cgattcttggatcggatatcgagttt 134  Q
    ||||||||| ||| |||| |||||||    
T  19421406 cgattcttgaatcagataccgagttt 19421431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 27704069 - 27704202
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||| ||| |||||||||||||| ||||||||||||||| |||||||||| || ||||||||| |||||||||||||||| | |||||||| ||| |||    
T  27704069 cgatttcctttggtgccaatttcggtgggctaagtccatagagagcttgctttggctttaaatg-gacccccgcaagtgggtggtgtgattgatcccctc 27704167  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
      ||||||||||||||| ||| |||| ||||||||    
T  27704168 agattagtcgattcttgaatcagataccgagtttt 27704202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 2344366 - 2344500
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||| |||||||||||||| | ||||||||||||||| |||||||  | || ||||||| | |||||||||||||| ||| || ||||||||| |||    
T  2344366 cgattccttctggtgccaattttggtgggctaagtccatacagagctttttttggctttaaacgggacccccgcaagtgagcggtgggattggtcccctc 2344465  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||| | ||||||||||||| ||||||||    
T  2344466 ggattagtcggtccttggatcggataccgagtttt 2344500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 31273981 - 31274114
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||| || |||||||  |||||||||||||| ||||||||||||| ||||||| | |  | ||||||||||||  || ||||||||| |||    
T  31273981 cgattccctctggagctaatttcggcgggctaagtccatacagagcttgctctggctttaaacg-gggctccgcaagtgggcagtgagattggtcccctc 31274079  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||||||||| |||||| ||||||||    
T  31274080 gaattagtcgattcttggaccggataccgagtttt 31274114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 41907647 - 41907514
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||||||||||||||  ||||||||||||||| |||| |||||||| ||||||| | | |||||||||||||| | || ||||||||| | |    
T  41907647 cgattctctctggtgccaatttcagtgggctaagtccatacagaggttgctctggctttaaacgtggcccccgcaagtgggtggtgggattggtcc-ccc 41907549  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
      |||||||||||||||||||||||| ||||||||    
T  41907548 agattagtcgattcttggatcggataccgagtttt 41907514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 42913637 - 42913513
Alignment:
Q  11 tggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcg 110  Q
    ||||||||||||||||||| ||||||||||  || ||||||||| ||||||| | | ||||||||||||| || || ||||||||| |||| |||||| |    
T  42913637 tggtgccaatttcgatgggataagtccatacggaacttgctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagttg 42913538  T
Q  111 attcttggatcggatatcgagtttt 135  Q
    |||||| ||||||||| ||||||||    
T  42913537 attcttagatcggataccgagtttt 42913513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 17212122 - 17212245
Alignment:
Q  3 attccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcga 102  Q
    |||| ||||||||||||||||| ||||||||||||||| |||| |||||||| ||| ||| | |||||| ||||||| | | || ||||||||| ||||     
T  17212122 attctctctggtgccaatttcggtgggctaagtccatacagagattgctctggcttaaaacgggacccctgcaagtgagtggtgggattggtcccctcgg 17212221  T
Q  103 attagtcgattcttggatcggata 126  Q
    ||||||||||||||||||| ||||    
T  17212222 attagtcgattcttggatcagata 17212245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 36772424 - 36772303
Alignment:
Q  14 tgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgatt 113  Q
    ||||||||||| |||||||||| |||| ||||||||||||| ||||||| | | ||||||  |||||||| ||  ||| ||||||||| |||||||||||    
T  36772424 tgccaatttcggtgggctaagttcatacagagcttgctctggctttaaacggggcccccgggagtgggcggtggaattagtcctctcggattagtcgatt 36772325  T
Q  114 cttggatcggatatcgagtttt 135  Q
    ||| ||||||||| ||||||||    
T  36772324 ctttgatcggataccgagtttt 36772303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 22638359 - 22638488
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||| ||||||| |||| ||||| ||    |||||||||||| ||||||| | | || ||||||||||||| || ||||| ||  |||    
T  22638359 cgattccctctggtgctaatttcggtgggttaagttca----gagcttgctctggctttaaacggggcctccgcaagtgggcggtgggattgatctcctc 22638454  T
Q  101 gaattagtcgattcttggatcggatatcgagttt 134  Q
    |||||||||||||||||||||||||| |||||||    
T  22638455 gaattagtcgattcttggatcggataccgagttt 22638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 33137951 - 33137825
Alignment:
Q  8 ctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattag 107  Q
    |||||||| ||||||   ||||||||||||||| |||||| |||||  ||||||||| | |||  ||||||||||| ||  |||||||| ||||||||||    
T  33137951 ctctggtgtcaattttagtgggctaagtccatacagagctcgctctagctttaaatggggccct-gcaagtgggcggtgaaattggtcccctcgaattag 33137853  T
Q  108 tcgattcttggatcggatatcgagtttt 135  Q
    ||||||||| ||||||||||||||||||    
T  33137852 tcgattcttagatcggatatcgagtttt 33137825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 39145786 - 39145652
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatat-agagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    ||||||||| |||||||||||||| ||||||||||| |||  ||||||||||||| ||||||| | | |||| |||||||| || || ||||||||| ||    
T  39145786 cgattccctgtggtgccaatttcggtgggctaagtcaataacagagcttgctctggctttaaacggg-cccctgcaagtggacggtgggattggtcccct 39145688  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||| ||| |||| | ||||||    
T  39145687 cgaattagtcgattcttgaatcagataccaagtttt 39145652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 9718121 - 9717987
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| | | ||| | ||| || ||| ||  |||||||  |||    
T  9718121 cgattccctctggtgtcaatttcgatgggctaagtccatagagagcttgctctggctttaaacggggccctcacaaatgagcggtggaattggtctcctc 9718022  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||| |||||| |||| |||  |||||||    
T  9718021 gaattagtcggttcttgaatcgaatactgagtttt 9717987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 31197673 - 31197791
Alignment:
Q  17 caatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattctt 116  Q
    |||||||| |||  |||||||||| ||| ||||||||  ||||||| | | ||||||||||||| || || ||||||||| |||  ||||||||||||||    
T  31197673 caatttcggtggattaagtccatacagatcttgctcttgctttaaacggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgattctt 31197772  T
Q  117 ggatcggatatcgagtttt 135  Q
    |||||||||||||||||||    
T  31197773 ggatcggatatcgagtttt 31197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 32849659 - 32849791
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    |||||||||| ||  |||||| | ||||||||||||| |  |||||||||||| ||||||||| ||| |||  ||||||||  || ||||||||| |||     
T  32849659 gattccctctagtctcaattttggtgggctaagtccacactgagcttgctctggctttaaatgggactcccataagtgggcagtgggattggtcccctca 32849758  T
Q  102 aattagtcgattcttggatcggatatcgagttt 134  Q
     |||||||||||||||||||||||| |||||||    
T  32849759 gattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 21373789 - 21373888
Alignment:
Q  13 gtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgat 112  Q
    |||||||||||| ||||||||||| ||| ||||||||||||| ||||||| | | ||||||||||||| || || ||||||||||| || ||||||||||    
T  21373789 gtgccaatttcggtgggctaagtctatacagagcttgctctggctttaaacggggcccccgcaagtggacggtgagattggtcctcacggattagtcgat 21373888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 23330869 - 23330739
Alignment:
Q  5 tccctctggtgccaatttcgatgggctaagtccatatagagctt-gctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaa 103  Q
    |||||| ||||||||||||| ||||| ||||||||| ||||||| |||||| ||| ||| | |||| ||||||||||||| |  ||||||||| ||| ||    
T  23330869 tccctccggtgccaatttcggtgggc-aagtccatacagagctttgctctggcttaaaacgggacctccgcaagtgggcggtaagattggtcccctcaaa 23330771  T
Q  104 ttagtcgattcttggatcggatatcgagtttt 135  Q
    |||||| || ||||||||||||| ||||||||    
T  23330770 ttagtcaatccttggatcggataccgagtttt 23330739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 22643476 - 22643342
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||| |||||| || |||||||| | ||||||||||||| ||||||||||||||||||||| |   ||| ||||||||| || ||||||| |||| |||    
T  22643476 cgatttcctctgatgtcaatttcggtaggctaagtccatacagagcttgctctgactttaaacggagccctcgcaagtggccggtgtgattagtcccctc 22643377  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||| ||||||||| |||| |||| | ||||||    
T  22643376 ggattaatcgattctttgatcagataccaagtttt 22643342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 31713006 - 31712902
Alignment:
Q  31 taagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcga 130  Q
    |||||||||| |  |||| ||||| ||||||  | ||||| |||||||||||| || ||||||||| |||| |||||||||||||||||||||||| |||    
T  31713006 taagtccatacaacgcttactctggctttaagcgggaccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccga 31712907  T
Q  131 gtttt 135  Q
    |||||    
T  31712906 gtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 9683895 - 9684014
Alignment:
Q  3 attccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcga 102  Q
    ||||||||| |||||||||||| |||||||||||||||  |||||| ||||| ||||||| | |  |||| |||||||||| |  ||| ||||| ||||     
T  9683895 attccctctagtgccaatttcggtgggctaagtccataccgagcttactctggctttaaacggggtccccacaagtgggcggtaggataggtcccctcgg 9683994  T
Q  103 attagtcgattcttggatcg 122  Q
    |||| |||||||||||||||    
T  9683995 attaatcgattcttggatcg 9684014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 28647036 - 28647170
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagctt-gctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    |||||||||||||||||||||||| ||||| ||||| ||| |||| || |||||| |||  || | | ||||| |||||||||| || ||||||| | ||    
T  28647036 cgattccctctggtgccaatttcggtgggc-aagtcaatacagagttttgctctggcttataacggggcccccacaagtgggcggtgggattggttccct 28647134  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||  | ||||||||||||||||||||||    
T  28647135 cgaattagtctgtccttggatcggatatcgagtttt 28647170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 42814931 - 42814994
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatg 64  Q
    ||||||||||||||| |||||||| ||||||||||||||| | |||||||||||||||||||||    
T  42814931 cgattccctctggtgtcaatttcggtgggctaagtccatacaaagcttgctctgactttaaatg 42814994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 8943468 - 8943410
Alignment:
Q  68 cccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggata 126  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  8943468 cccccgcaagtgggcggtgtgattggtccccttgaattagtcgattcttggatcggata 8943410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 43 - 135
Target Start/End: Complemental strand, 38864538 - 38864446
Alignment:
Q  43 gagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||| |  | ||| |||| ||| || ||  ||||||||||||||||||||| |||||||||||||||||||| ||||    
T  38864538 gagcttgctctgactttaaacggaatccctgcaaatggacggtgatattggtcctctcgaattagtcaattcttggatcggatatcgaatttt 38864446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 43785433 - 43785303
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||| || |||| ||||||  ||| ||||||||||| ||||||| |||||  |||||| | | || |||||||||| || || ||||||||| ||     
T  43785433 cgattcccacttgtgctaatttcagtggactaagtccatacagagcttactctggttttaaacggggcctccgcaagtggacggtgagattggtcccctt 43785334  T
Q  101 gaattagtcgattcttggatcggatatcgag 131  Q
    | ||||||||||| |||||||||||| ||||    
T  43785333 ggattagtcgatttttggatcggataccgag 43785303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13332557 - 13332496
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaa 62  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||| |||||||    
T  13332557 cgattccctctggagccaatttcggtgggctaagtccatacagagcttactctggctttaaa 13332496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7799966 - 7799903
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatg 64  Q
    |||||||||||||||||||||||  |||| |||||||||| |||||||||| || |||||||||    
T  7799966 cgattccctctggtgccaatttcagtgggttaagtccatagagagcttgctatggctttaaatg 7799903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 25333519 - 25333593
Alignment:
Q  50 ctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcgga 124  Q
    |||||||||||||   | |||||||||||||||  || ||||||||| |||| ||||||||||||||||||||||    
T  25333519 ctctgactttaaacaggccccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttggatcgga 25333593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14199800 - 14199739
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaa 62  Q
    |||||||||||  ||||||||| | ||||||||||| ||||||||||||||||| |||||||    
T  14199800 cgattccctctaatgccaattttggtgggctaagtctatatagagcttgctctgcctttaaa 14199739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 6491675 - 6491735
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaa 62  Q
    |||||||||||||| ||||||||||||||||| | |||| |||||||||| || |||||||    
T  6491675 gattccctctggtgtcaatttcgatgggctaaattcatacagagcttgctttggctttaaa 6491735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 22696388 - 22696522
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagctt-gctctgactttaaatgcgacccccgc--aagtgggcgatgtgattggtcctc 98  Q
    ||||||||||||||||||||||| ||||   | |||||| ||||||| |||||| |||  || | | |||||||  |||| ||||  | |||||||||||    
T  22696388 gattccctctggtgccaatttcggtgggg--actccatacagagctttgctctggcttagaacgaggcccccgcgcaagtaggcggcgggattggtcctc 22696485  T
Q  99 tcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||| |||||||| | ||||||||||||| ||||||||    
T  22696486 tcggattagtcggtccttggatcggataccgagtttt 22696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 11910015 - 11909954
Alignment:
Q  74 caagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||| || || ||||||||||||||||||||||||| |||| ||  |||||||||||||    
T  11910015 caagtggacggtgggattggtcctctcgaattagtcgatccttgaattagatatcgagtttt 11909954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 22299958 - 22300003
Alignment:
Q  90 ttggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||||    
T  22299958 ttggtcctctcggattagtcgattcttgaatcggataccgagtttt 22300003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 21574169 - 21574102
Alignment:
Q  68 cccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||| ||||| |||| || ||||||||| |||| |||||||| | ||||||||||||| ||||||||    
T  21574169 cccccacaagtaggcggtgagattggtcccctcggattagtcggtccttggatcggataccgagtttt 21574102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 36173102 - 36173223
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagctt-gctctgactttaaatgcgaccccc-gcaagtgggcgatgtgattggtcctc 98  Q
    ||||||||||| |||||||||| | ||||| ||||||||| ||||||  |||||   || ||||| | ||||| | |||| |||| || |||||||||||    
T  36173102 cgattccctcttgtgccaattttggtgggc-aagtccatacagagctaagctcttgtttaaaatgggcccccccgtaagttggcgctgggattggtcctc 36173200  T
Q  99 tcgaattagtcgattcttggatc 121  Q
    ||||||||||| |||||| ||||    
T  36173201 tcgaattagtcaattcttcgatc 36173223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 36395501 - 36395547
Alignment:
Q  89 attggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||| |||||||||||||||||| ||||| ||| ||||    
T  36395501 attggtcctctcggattagtcgattcttggattggataccgaatttt 36395547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 97500 - 97366
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||| || |||||||||||||    
T  97500 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacgggacccccgcaagtgggcggtgggattggtcctctc 97401  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||| || ||||| |||||| ||||||||    
T  97400 gtattagtcggtttttggaccggataccgagtttt 97366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 2522 - 2478
Alignment:
Q  90 ttggtcctctcgaattagtcgattcttggatcggatatcgagttt 134  Q
    |||||| ||||| ||||||||||||||| ||||||||||||||||    
T  2522 ttggtcttctcggattagtcgattcttgaatcggatatcgagttt 2478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 3e-44; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 34147409 - 34147543
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  34147409 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctc 34147508  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  34147509 ggattagtcgattcttggatcggataccgagtttt 34147543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 34160025 - 34160159
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  34160025 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctc 34160124  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  34160125 ggattagtcgattcttggatcggataccgagtttt 34160159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 9239038 - 9239171
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||| || ||||||||| | |||||||||||||||| || ||||||||| |||    
T  9239038 cgattccctctggtgccaatttcggtgggttaagtccatatagagcttgctttggctttaaatggggcccccgcaagtgggcggtgggattggtcccctc 9239137  T
Q  101 gaattagtcgattcttggatcggatatcgagttt 134  Q
    | |||||||||||||||||||||||| |||||||    
T  9239138 ggattagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 11448934 - 11449068
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  11448934 cgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 11449033  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||||||| |||||||||||||||||    
T  11449034 ggattagtcgattcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 15360232 - 15360098
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | ||||||||| |||||| || ||||||||| |||    
T  15360232 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctc 15360133  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  15360132 ggattagtcgattcttggatcggataccgagtttt 15360098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 654280 - 654146
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | | |||||||||||||| || ||||||||| |||    
T  654280 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctc 654181  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||| |||||||||||| ||||||||    
T  654180 ggattagtcgattattggatcggataccgagtttt 654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 3222769 - 3222636
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | |  ||||||||||||||| || ||||||||| |||    
T  3222769 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgtctttaaacg-gggccccgcaagtgggcggtgggattggtcccctc 3222671  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  3222670 ggattagtcgattcttggatcggataccgagtttt 3222636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 5360205 - 5360071
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||  ||||||||||| ||||||||||||||| ||||||||||||||||||||| |  |||||| |||||||||| || ||||||||| |||    
T  5360205 cgattccctctaatgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacggaacccccacaagtgggcggtgggattggtcccctc 5360106  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||| ||||||||| ||||||||    
T  5360105 gaattagtcgattcttagatcggataccgagtttt 5360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 21148644 - 21148511
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | |  ||||||||||||||| || ||||||||| |||    
T  21148644 cgattccctctagtgccaatttcgatgggctaagtccatacagagcttgctctgactttaaacg-gggccccgcaagtgggcggtgggattggtcccctc 21148546  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||||||| |||||||| ||||||||    
T  21148545 ggattagtcgattcttgaatcggataccgagtttt 21148511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 17081187 - 17081054
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||| || ||||||||| ||||    
T  17081187 gattccctctggtgtcaatttcggtgggctaagtccatacagagcttgctctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcg 17081088  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
    ||| ||| | ||||||||||| ||| ||||||||    
T  17081087 aataagttgtttcttggatcgaataccgagtttt 17081054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 1344998 - 1345132
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||  ||||||||||||||| | ||||||||||| ||||||| | | ||||||||||||| || || ||||||||| ||     
T  1344998 cgattccctctggtgccaatttcagtgggctaagtccatacaaagcttgctctggctttaaacgggccccccgcaagtggacggtgggattggtcccctt 1345097  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  1345098 ggattagtcgattcttggatcggataccgagtttt 1345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 21982454 - 21982321
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||  |||||||||||||  ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  21982454 cgattcccgatggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc-ctc 21982356  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  21982355 ggattagtcgattcttggatcggataccgagtttt 21982321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 12390488 - 12390600
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||   | |||||||||||||||| || ||||||||| |||    
T  12390488 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctc 12390587  T
Q  101 gaattagtcgatt 113  Q
    | |||||||||||    
T  12390588 ggattagtcgatt 12390600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 9690756 - 9690638
Alignment:
Q  17 caatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattctt 116  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| | | ||| | ||||||| || || |||||||||||||| ||||||||||||||    
T  9690756 caatttcggtgggctaagtccatacagagcttgctctggctttaaacggggccctcacaagtggacggtgggattggtcctctcggattagtcgattctt 9690657  T
Q  117 ggatcggatatcgagtttt 135  Q
    |||||||||| ||||||||    
T  9690656 ggatcggataccgagtttt 9690638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 28672130 - 28672264
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||| |||||| | ||||||||||||||| |||||||| | || ||||||| | | ||| |||||||||||| || ||||||||| |||    
T  28672130 cgattccctctggtgtcaattttggtgggctaagtccatacagagcttgttttggctttaaacgggcccctcgcaagtgggcggtgggattggtcccctc 28672229  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||||||||||| |||| ||||||||    
T  28672230 ggattagtcgattcttggatcagataccgagtttt 28672264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 9844007 - 9844135
Alignment:
Q  7 cctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaatta 106  Q
    ||||||||| |||||| | |||| |||||||||| |||||||| |||| ||||||| | | ||||| |||||||||| || |||||||||  ||| ||||    
T  9844007 cctctggtgtcaattttggtgggttaagtccatacagagcttgttctggctttaaacggggccccctcaagtgggcggtgagattggtcccttcggatta 9844106  T
Q  107 gtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||||||||    
T  9844107 gtcgattcttggatcggatatcgagtttt 9844135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 14212955 - 14213079
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||          ||||||| | |  ||||||||||||| | || ||||||||| |||    
T  14212955 cgattccctctggtgccaattttgatgggctaagtccatatagag----------ctttaaacgggggccccgcaagtgggtggtgggattggtccactc 14213044  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  14213045 ggattagtcgattcttggatcggataccgagtttt 14213079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 9208315 - 9208449
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagc-ttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    |||||||| ||||||||||||||| ||||| ||||||||| ||||| ||||| || ||||||||| | |||||||||||||||| || ||||||||  ||    
T  9208315 cgattccccctggtgccaatttcggtgggc-aagtccatacagagccttgctttggctttaaatggggcccccgcaagtgggcggtgggattggtctcct 9208413  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |  | |||||||||||||||||  ||| ||||||||    
T  9208414 cagaatagtcgattcttggatcaaataccgagtttt 9208449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 11007244 - 11007362
Alignment:
Q  17 caatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattctt 116  Q
    |||||||| ||||||||||||||| | ||||||||||  ||||||  | | |||||||||||||||| || |||||| || |||| ||||||||||||||    
T  11007244 caatttcggtgggctaagtccatacaaagcttgctctagctttaagcggggcccccgcaagtgggcggtgggattggccccctcggattagtcgattctt 11007343  T
Q  117 ggatcggatatcgagtttt 135  Q
     ||||||||| | ||||||    
T  11007344 tgatcggatacctagtttt 11007362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 11840964 - 11841097
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| | |||||||| ||  |||||| | |  ||||  |||||| || || |||| |||| |||    
T  11840964 cgattccctctggtgccaatttcggtgggttaagtccatacaaagcttgctttggttttaaacg-gggccccataagtggacggtgggattagtcccctc 11841062  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||| |||||||||||| ||||||||    
T  11841063 gaattagtcgattattggatcggataccgagtttt 11841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 14504200 - 14504082
Alignment:
Q  17 caatttcgatgggctaagtccatatagagctt-gctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattct 115  Q
    ||||||||||||| |||||||||| || | || ||||||  |||||||| |  ||||||||||||||| || ||||| ||||||||||||||||||| ||    
T  14504200 caatttcgatggg-taagtccatacagtgttttgctctggttttaaatggggtccccgcaagtgggcggtgggattgatcctctcgaattagtcgatcct 14504102  T
Q  116 tggatcggatatcgagtttt 135  Q
    || |||||||| ||||||||    
T  14504101 tgtatcggataccgagtttt 14504082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 17149590 - 17149458
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagc-ttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    |||||||||||||||| ||||||| | ||| ||||||||| ||||| ||||| || ||||||||| | ||||||||||||  || || ||||||||| ||    
T  17149590 cgattccctctggtgctaatttcggttggc-aagtccatacagagccttgctttggctttaaatggggcccccgcaagtgaacggtgggattggtcccct 17149492  T
Q  100 cgaattagtcgattcttggatcggatatcgagtt 133  Q
    ||||||||||| | |||| ||| |||| ||||||    
T  17149491 cgaattagtcggtccttgaatcagataccgagtt 17149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 15730593 - 15730495
Alignment:
Q  37 catatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||| |||||||| |||| ||||||| | | ||||| || ||||||| || ||||||||  |||| |||||||||||||| ||||||||||||||||||    
T  15730593 catacagagcttgttctggctttaaacgtggcccccacacgtgggcggtgggattggtcacctcggattagtcgattctttgatcggatatcgagtttt 15730495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 31039084 - 31039177
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcc 96  Q
    |||||||||| ||  |||||||||||||||||||||||| |||| ||||| || || | |||| ||||||| |||||||||| ||||||||||||    
T  31039084 gattccctctagtatcaatttcgatgggctaagtccatacagagtttgctatggctatgaatg-gacccccacaagtgggcggtgtgattggtcc 31039177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12591700 - 12591761
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaa 62  Q
    ||||||||||| |||||||||||  ||||||||||||||| ||||||||||||| |||||||    
T  12591700 cgattccctctcgtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaa 12591761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 28741944 - 28741850
Alignment:
Q  33 agtccatatagagct-tgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggata 126  Q
    |||||||||||| || ||||||| ||| ||| |  |||||| ||| |||  | |||||||||||||||||||||||||| | |||||||||||||    
T  28741944 agtccatatagaactctgctctggcttaaaacggaacccccacaaatggatggtgtgattggtcctctcgaattagtcggtccttggatcggata 28741850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 33499539 - 33499672
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagc-ttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||| |||||||| |||||| |||||||| | | | ||||| || ||||||||| | || || |||||||||| || ||||||||| |||    
T  33499539 gattccctctggtgtcaatttcggtgggct-agtccatacaaatctttgctttggctttaaatgggccctccacaagtgggcggtgggattggtcccctc 33499637  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||  ||  |||| |||||| ||||||||    
T  33499638 ggattagtcagttgatggaccggataccgagtttt 33499672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 10377780 - 10377911
Alignment:
Q  3 attccctctggtgccaatttcgatgggctaagtccatatagagc-ttgctctgactttaaa-tgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||| |||||||||||||| ||||| ||||||||| | ||| |||||||||||| |||  | | ||||| |||||||||| ||  |||||||| |||    
T  10377780 attccctatggtgccaatttcggtgggc-aagtccatacatagctttgctctgacttaaaacggggccccccacaagtgggcggtggcattggtcccctc 10377878  T
Q  101 gaattagtcgattcttggatcggatatcgagtt 133  Q
    | | |||||| | ||||||| ||||| ||||||    
T  10377879 ggagtagtcggtccttggattggataccgagtt 10377911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 27866268 - 27866204
Alignment:
Q  70 cccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagttt 134  Q
    |||||||||||||| || |||| |||| |||||||||||||||| |||||||  |||||| ||||    
T  27866268 cccgcaagtgggcggtgggattagtcccctcgaattagtcgatttttggatcaaatatcgtgttt 27866204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 33718531 - 33718476
Alignment:
Q  73 gcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatc 128  Q
    |||||||| || || ||||| ||| |||| ||||||||||||||||||||||||||    
T  33718531 gcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggatatc 33718476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 8479433 - 8479494
Alignment:
Q  74 caagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||| ||||||||| |||  |||||||| | ||| ||||||||||||| ||||    
T  8479433 caagtgggcgatgagattggtcccctcagattagtcgttccttagatcggatatcgattttt 8479494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 13753347 - 13753388
Alignment:
Q  94 tcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||| || ||||| ||||||||    
T  13753347 tcctctcgaattagtcgattcttgaattggataccgagtttt 13753388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 4797262 - 4797294
Alignment:
Q  103 attagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||| ||||||||    
T  4797262 attagtcgattcttggatcggataacgagtttt 4797294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 6384005 - 6383930
Alignment:
Q  5 tccctctggtgccaatttcgatgggctaagtccatatagagc-ttgctctgactttaaatgcgacccccgcaagtgg 80  Q
    |||||| ||||||||||||  |||||| |||||||| ||||| ||||| || ||||||||| ||||||| |||||||    
T  6384005 tccctcgggtgccaatttcagtgggct-agtccataaagagctttgctttggctttaaatgggacccccacaagtgg 6383930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 7491698 - 7491666
Alignment:
Q  103 attagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||| ||||||||    
T  7491698 attagtcgattcttggatcggataccgagtttt 7491666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 40133583 - 40133449
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  40133583 cgattccctctggtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 40133484  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||||| ||||||||    
T  40133483 gaattagtcgattcttggatcggataccgagtttt 40133449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 25289848 - 25289715
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  25289848 cgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc-ctc 25289750  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||||| ||||||||    
T  25289749 gaattagtcgattcttggatcggataccgagtttt 25289715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 8097413 - 8097279
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||| ||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  8097413 cgattccctcttgtgctaatttcgatgggctaagtccatacagagcatgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 8097314  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  8097313 ggattagtcgattcttggatcggataccgagtttt 8097279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 8456284 - 8456150
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||  || ||||||||| |||    
T  8456284 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcagtgggattggtcccctc 8456185  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||||||| |||||||| ||||||||    
T  8456184 ggattagtcgattcttgaatcggataccgagtttt 8456150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 26174176 - 26174310
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||| |||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||  | |||||||||||||||| || ||||||||| |||    
T  26174176 cgatttcctctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaatagggcccccgcaagtgggcggtgggattggtcccctc 26174275  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  26174276 ggattagtcgattcttggatcggataccgagtttt 26174310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 30257687 - 30257821
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| |||||||||||||||||| ||||||||||| ||||||||||||| ||||||||| | |||||||||||||||| ||  |||||||| |||    
T  30257687 cgattccctttggtgccaatttcgatggactaagtccatacagagcttgctctggctttaaatggggcccccgcaagtgggcggtggcattggtcccctc 30257786  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||| ||||    
T  30257787 ggattagtcgattcttggatcggataccgaatttt 30257821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 35492974 - 35493108
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  35492974 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 35493073  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||| | ||| ||||||||    
T  35493074 ggattagtcgattcttggattgaataccgagtttt 35493108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 45529888 - 45529755
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  45529888 cgattccctctggagccaatttcgatgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctc 45529789  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||| ||||||||| ||||||||    
T  45529788 ggattagtcgattctt-gatcggataccgagtttt 45529755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 49258396 - 49258262
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | ||||| |||||||||| || ||||||||| |||    
T  49258396 cgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtgggcggtgggattggtcccctc 49258297  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  49258296 ggattagtcgattcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 10190875 - 10190742
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    |||||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | ||||||||||||| || || ||||||||| ||||    
T  10190875 gattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcg 10190776  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
     |||||||||||||||||||||||| ||||||||    
T  10190775 gattagtcgattcttggatcggataccgagtttt 10190742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 15566633 - 15566500
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  15566633 cgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacg-ggcccccgcaagtgggcggtgggattggtcccctc 15566535  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
      |||||||||||||||||||||||| ||||||||    
T  15566534 agattagtcgattcttggatcggataccgagtttt 15566500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 18177021 - 18176887
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || |||||||||  ||    
T  18177021 cgattccctctggtgccaatttcggtggactaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccatc 18176922  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||||||||||||||||  |||||||    
T  18176921 ggattagtcgattcttggatcggatacagagtttt 18176887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 32151487 - 32151621
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| |||| |||||||||||| |||||||||  |||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  32151487 cgattctctctagtgccaatttcggtgggctaagctcatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgagattggtcccctc 32151586  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||||| ||||||||    
T  32151587 gaattagtcgattcttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 39041986 - 39041852
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||||||||||||||| ||||||||||||||  ||||||||||||| ||||||| | | |||||||||||||| | || ||||||||| |||    
T  39041986 cgattctctctggtgccaatttcggtgggctaagtccatgcagagcttgctctggctttaaacggggcccccgcaagtgggtggtgggattggtccactc 39041887  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  39041886 ggattagtcgattcttggatcggataccgagtttt 39041852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 45272550 - 45272416
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| |||||||||||||||  |||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  45272550 cgattccctctggtgccaatttcggtgggctaagtccatacggagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 45272451  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||| || |||||||||||||| ||||||||    
T  45272450 ggattagttgactcttggatcggataccgagtttt 45272416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 46576411 - 46576545
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| |  ||||||||| ||     
T  46576411 cgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtcggattggtcccctt 46576510  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  46576511 ggattagtcgattcttggatcggataccgagtttt 46576545  T

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Target: chr3; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 10083952 - 10083819
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    |||||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | ||||| ||||||| || || ||||||||| ||||    
T  10083952 gattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtggacggtgggattggtcccctcg 10083853  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
     |||||||||||||||||||||||| ||||||||    
T  10083852 gattagtcgattcttggatcggataccgagtttt 10083819  T

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Target: chr3; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 30807287 - 30807153
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaa-tgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||  | | |||||||||||||||| |  ||||||||| ||    
T  30807287 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcggtaggattggtcc-ct 30807189  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    || |||||||||||||||||||||||| ||||||||    
T  30807188 cggattagtcgattcttggatcggataccgagtttt 30807153  T

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Target: chr3; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 2511431 - 2511297
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||| |||||||||||||| | |||| ||||||||||||| || ||||||||  |||    
T  2511431 cgattccctctggtgccaatttcggtgggctaagttcatacagagctcgctctgactttaaacgggacctccgcaagtgggcggtgggattggtctcctc 2511332  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||| |||||||| |||||||| | ||||||    
T  2511331 gaattagtagattcttgaatcggataccaagtttt 2511297  T

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Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 52821769 - 52821636
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||||||| ||||||| | |  ||||| ||||||||| || ||||||||| |||    
T  52821769 cgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacg-gggccccgtaagtgggcggtgggattggtcccctc 52821671  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  52821670 ggattagtcgattcttggatcggataccgagtttt 52821636  T

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Target: chr3; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 53234044 - 53233911
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| || |||| | | |||||||||||||||| || ||||||||| |||    
T  53234044 cgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctctaaacggggcccccgcaagtgggcggtgggattggtcccctc 53233945  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||| ||||||||| ||||||||    
T  53233944 ggattagtcgattctt-gatcggataccgagtttt 53233911  T

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Target: chr3; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 31537971 - 31537838
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    ||||||||||||||||||||| | ||||||||||| ||| ||||||| ||||| ||||||| |   |||| ||||||||||| || ||||||||| ||||    
T  31537971 gattccctctggtgccaattttggtgggctaagtctatacagagcttactctggctttaaacggagcccctgcaagtgggcggtgagattggtcccctcg 31537872  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||| |||||||||||||||||||||||||    
T  31537871 aattagtcaattcttggatcggatatcgagtttt 31537838  T

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Target: chr3; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 21363006 - 21363140
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||| |||||||| | ||||||||||||| ||||||||||||| ||||||| |   |||||||||||||||| || ||||||| | |||    
T  21363006 cgattccctctggtgtcaatttcggtaggctaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcggtgggattggttccctc 21363105  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||| ||||||||||||||||||| ||||||||    
T  21363106 ggattaatcgattcttggatcggataccgagtttt 21363140  T

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Target: chr3; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 34492709 - 34492575
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || |||||||||  ||    
T  34492709 cgattccctctgctgccaatttcgttgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtccattc 34492610  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
      |||||| |||||||||||| |||| ||||||||    
T  34492609 agattagttgattcttggatctgataccgagtttt 34492575  T

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Target: chr3; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 48977451 - 48977585
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||| |||||||||||||||| |||| |||||||||| ||||||||||||| ||||||| | | |||| ||||||||||| || ||||||||| |||    
T  48977451 cgattccttctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaacggggcccctgcaagtgggcggtgggattggtcccctc 48977550  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||| | ||||||||||||| ||||||||    
T  48977551 ggattagtcggtccttggatcggataccgagtttt 48977585  T

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Target: chr3; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 52455783 - 52455649
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||| ||||||||||||| | | ||||||||||||||||||||| | | ||||||||||||   | || ||||||||| |||    
T  52455783 cgattccctctggtgccaattttgatgggctaagtctacacagagcttgctctgactttaaacggggcccccgcaagtgactggtgggattggtcccctc 52455684  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||| ||||| ||||||||    
T  52455683 ggattagtcgattcttggattggataccgagtttt 52455649  T

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Target: chr3; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 53424310 - 53424177
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||| ||||| || ||||||| | | |||||||||||| ||| || ||||||||| |||    
T  53424310 cgattccctttggtgccaatttcggtgggctaagtccatacagagtttgctatggctttaaacggg-cccccgcaagtgagcggtgggattggtcccctc 53424212  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  53424211 ggattagtcgattcttggatcggataccgagtttt 53424177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 25379824 - 25379949
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||| ||| ||||||||||||  |||||||||||||| ||||||||||||| ||||||| | | |||||||||| ||||| || ||||||||| |||    
T  25379824 cgattccttctagtgccaatttcggagggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagcgggcggtgggattggtcccctc 25379923  T
Q  101 gaattagtcgattcttggatcggata 126  Q
    | ||||||||||||||||||||||||    
T  25379924 ggattagtcgattcttggatcggata 25379949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 33398602 - 33398468
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||| |||||||||| | |||| || ||||||| ||||||||||||  ||||||| | | |||||||||||||||| || ||||||| | |||    
T  33398602 cgattccctctagtgccaattttggtgggttatgtccatacagagcttgctctagctttaaacggggcccccgcaagtgggcggtgggattggttccctc 33398503  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||||| ||| ||||    
T  33398502 gaattagtcgattcttggatcggataccgaatttt 33398468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 40940888 - 40941022
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| | | ||||| |||||||| | |  ||||||||| |||    
T  40940888 cgattccctctggtgccaatttcggtggactaagtccatacagagcttgctctgactttaaacggggcccccacaagtgggtggtaggattggtcccctc 40940987  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||| || ||||||| ||| |||| ||||||||    
T  40940988 gaattactcaattcttgaatcagataccgagtttt 40941022  T

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Target: chr3; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 48972845 - 48972714
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| | || |||  |||||||| | ||  ||||||||  ||    
T  48972845 cgattccctctggtgccaatttcgatgggttaagttcatatagagtttgctctgactttaaacg-gatccc--caagtggggggtgaaattggtccattc 48972749  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||||||| |||||||| ||||||||    
T  48972748 gaattagtcgattcttgaatcggataccgagtttt 48972714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 51532852 - 51532968
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||  ||||||||||| ||||||||||||||| |||||||||||| |||||||||| ||||||||||||||| || || ||||||||| |||    
T  51532852 cgattctctctaatgccaatttcggtgggctaagtccatacagagcttgctctaactttaaatgggacccccgcaagtggacggtgggattggtcccctc 51532951  T
Q  101 gaattagtcgattcttg 117  Q
      |||||||| ||||||    
T  51532952 agattagtcggttcttg 51532968  T

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Target: chr3; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 24407324 - 24407458
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||||||| ||||||| |||| |||||  ||| |||  |||||||||||||||| | | ||  |||||||||||| || ||||||||| |||    
T  24407324 cgattctctctggtgctaatttcggtgggttaagtatatacagaatttgctctgactttaaacggggccatcgcaagtgggcggtgggattggtcccctc 24407423  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  24407424 ggattagtcgattcttggatcggataccgagtttt 24407458  T

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Target: chr3; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 26108355 - 26108436
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggc 82  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||    
T  26108355 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggc 26108436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 8958170 - 8958035
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaa-tgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    ||||| ||||||||| |||||| | ||||||||||||||| | ||||||||||  ||||||| || | |||||||||||||||| || ||||||||| ||    
T  8958170 cgatttcctctggtgtcaattttggtgggctaagtccatacaaagcttgctctagctttaaaatggggcccccgcaagtgggcggtgggattggtcccct 8958071  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |  |||| |||||||||||||| |||| ||||||||    
T  8958070 ctgattaatcgattcttggatcagataccgagtttt 8958035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 19857114 - 19857241
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| ||||| |||||||| |||||||||| ||  ||||||||||||| |||||||||| |  | ||||||||||||| ||  |||||||| |||    
T  19857114 cgattccctttggtgtcaatttcggtgggctaagttcagttagagcttgctctaactttaaatggggtctccgcaagtgggcggtggaattggtcccctc 19857213  T
Q  101 gaattagtcgattcttggatcggatatc 128  Q
    | | ||||||||||||| || |||||||    
T  19857214 gcaatagtcgattcttgaattggatatc 19857241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 24165817 - 24165715
Alignment:
Q  32 aagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgag 131  Q
    ||||||||| ||||||||||||| ||||||| | | |||| ||||||||||| || ||||| ||| |||| |||||||||||||||||||||||| ||||    
T  24165817 aagtccatacagagcttgctctggctttaaacggggcccc-gcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgag 24165719  T
Q  132 tttt 135  Q
    ||||    
T  24165718 tttt 24165715  T

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Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 17579245 - 17579135
Alignment:
Q  26 tgggctaagtccatatagagcttgctctgactttaaatgcgaccc-ccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcgga 124  Q
    ||||||||||||||| |||||||||| |  ||||||| | ||||| ||||||||||||| || ||||||||| |||  ||||||||||| |||||||| |    
T  17579245 tgggctaagtccatacagagcttgctttagctttaaacgggaccctccgcaagtgggcggtgagattggtcccctcagattagtcgatttttggatcgaa 17579146  T
Q  125 tatcgagtttt 135  Q
    |||||||||||    
T  17579145 tatcgagtttt 17579135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 25344190 - 25344058
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    |||||||| ||||| ||||||   ||| ||||||||||| |||| |||||||| ||||||| | | ||||||| ||||||||||| ||||||| | ||||    
T  25344190 gattccctttggtgtcaatttttgtggtctaagtccatacagagtttgctctggctttaaacggggcccccgctagtgggcgatgggattggttc-ctcg 25344092  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
     |||||||||||||| ||||| ||| ||||||||    
T  25344091 gattagtcgattcttagatcgaataccgagtttt 25344058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 29915395 - 29915288
Alignment:
Q  9 tctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagt 108  Q
    |||||||||| ||||| |||||||||| |||| ||||||||| ||| ||||||| | | |||||||||||||||| || ||||| |||  ||||||||||    
T  29915395 tctggtgccattttcggtgggctaagtacatacagagcttgccctggctttaaacggg-cccccgcaagtgggcggtgggattgatcccatcgaattagt 29915297  T
Q  109 cgattcttg 117  Q
    |||||||||    
T  29915296 cgattcttg 29915288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 29964548 - 29964441
Alignment:
Q  9 tctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagt 108  Q
    |||||||||| ||||| |||||||||| |||| ||||||||| ||| ||||||| | | |||||||||||||||| || ||||| |||  ||||||||||    
T  29964548 tctggtgccattttcggtgggctaagtacatacagagcttgccctggctttaaacggg-cccccgcaagtgggcggtgggattgatcccatcgaattagt 29964450  T
Q  109 cgattcttg 117  Q
    |||||||||    
T  29964449 cgattcttg 29964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 53848502 - 53848434
Alignment:
Q  67 acccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||||||| || ||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  53848502 acccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 53848434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 4462696 - 4462829
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||  |||||||||||||||||||| |||| ||||||| ||||  ||||||| | |  |||||||||||| || || ||||| ||| |||    
T  4462696 cgattccctctggcaccaatttcgatgggctaagttcatacagagcttactctagctttaaacg-gggccccgcaagtggacggtgggattgatccactc 4462794  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||  |||||||||| ||||| ||||||||    
T  4462795 ggattagtttattcttggattggataccgagtttt 4462829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 53288846 - 53288725
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||| ||||||||||| | |||||||| || ||||||| | |  ||||||||  || || || |||| |||| |||    
T  53288846 cgattccctctggtgccaatttcggtggactaagtccatacaaagcttgctttggctttaaacg-gggccccgcaaacggacggtgagattagtcccctc 53288748  T
Q  101 gaattagtcgattcttggatcgg 123  Q
    ||||||||||||| |||||||||    
T  53288747 gaattagtcgattattggatcgg 53288725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 7485659 - 7485531
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||| ||||||||||| |||||||||| ||||    ||||| |||| |||||||   | |||| |||||||| || || ||||||||| |||    
T  7485659 cgattccctctgatgccaatttcggtgggctaagttcata----gcttgatctggctttaaacagg-cccctgcaagtggccggtgggattggtcc-ctc 7485566  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  7485565 ggattagtcgattcttggatcggataccgagtttt 7485531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 11390666 - 11390799
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    |||| ||||||||| |||||| | ||||||||||||||| ||||||||||||| ||||||||| | || |||||| ||     || ||||  ||| ||||    
T  11390666 gatttcctctggtgtcaattttggtgggctaagtccatacagagcttgctctgtctttaaatgggtcctccgcaaatgattcgtgagattattcccctcg 11390765  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
     ||||||||||||||||||||||||  |||||||    
T  11390766 gattagtcgattcttggatcggatactgagtttt 11390799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 54475777 - 54475878
Alignment:
Q  34 gtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtt 133  Q
    ||||||| |||||||||| || ||||||| | | || ||||||||||||| || ||||||||| || | ||||||||||||||||||| |||| ||||||    
T  54475777 gtccatacagagcttgctttggctttaaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagtt 54475876  T
Q  134 tt 135  Q
    ||    
T  54475877 tt 54475878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 1178235 - 1178367
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagctt-gctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    |||||| | ||||||||||||||| ||||| ||||||||| ||| ||| |||||| ||||||||| | ||||  || ||||||| || ||||||||| ||    
T  1178235 cgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggggcccca-cacgtgggcggtgggattggtcc-ct 1178331  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    || ||||||||| |||||||||||||| ||||||||    
T  1178332 cggattagtcgaatcttggatcggataccgagtttt 1178367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 33698806 - 33698706
Alignment:
Q  35 tccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagttt 134  Q
    ||||||||||| |||||||| ||||||| | | | ||||||| |||| | || ||||||||| ||| |||||||||||||| |||||||||  |||||||    
T  33698806 tccatatagagtttgctctggctttaaacggggctcccgcaaatgggtggtgggattggtcccctcaaattagtcgattctcggatcggatgccgagttt 33698707  T
Q  135 t 135  Q
    |    
T  33698706 t 33698706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 48104985 - 48105073
Alignment:
Q  46 cttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagttt 134  Q
    ||||||||| |||||||   | ||||| |||||||||| || |||||||||  ||| |||||||||||||||||||||||| |||||||    
T  48104985 cttgctctggctttaaacagggcccccacaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1242036 - 1242098
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagc-ttgctctgactttaaa 62  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||| |||||||| |||||||    
T  1242036 cgattccctctggtgccaattttggtgggctaagtccatacagagctttgctctggctttaaa 1242098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 49167119 - 49167247
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagc---ttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcct 97  Q
    |||||| |||||||| |||||||| ||| ||||||||||| | |||   |||||||| ||||||| | |||||||||||||||| | || | ||||| |     
T  49167119 cgattctctctggtgtcaatttcggtggactaagtccatacatagcgttttgctctggctttaaacgggacccccgcaagtgggtggtggggttggttcc 49167218  T
Q  98 ctcgaattagtcgattcttggatcggata 126  Q
    || |||||||||| ||| |||||| ||||    
T  49167219 cttgaattagtcggttcatggatcagata 49167247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7470349 - 7470288
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaa 62  Q
    |||||||||||  ||||||||||| |||||||||| |||| ||||||||||||| |||||||    
T  7470349 cgattccctctaatgccaatttcggtgggctaagttcatacagagcttgctctggctttaaa 7470288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 3747731 - 3747778
Alignment:
Q  88 gattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  3747731 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 3747778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 1692913 - 1693030
Alignment:
Q  17 caatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattctt 116  Q
    |||||||| ||| ||||||| ||| ||| ||||||||| ||||| |   | |||||||||||||||| || |||| | || |||  ||||||||||||||    
T  1692913 caatttcggtggactaagtctatacagaacttgctctggctttagacagg-cccccgcaagtgggcggtgggatttgccccctcagattagtcgattctt 1693011  T
Q  117 ggatcggatatcgagtttt 135  Q
    | |||||||| ||||||||    
T  1693012 gaatcggataccgagtttt 1693030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 4048085 - 4048147
Alignment:
Q  73 gcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||| || || ||||||||| |||| |||||| ||||||||||||||||| ||||||||    
T  4048085 gcaagtggacggtgggattggtcccctcggattagttgattcttggatcggataccgagtttt 4048147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 50583055 - 50583163
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagctt-gctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    ||||| |||||| ||||||||||| |||| |||||||||| | | ||| | | |||||||||||| || ||||| ||||| ||| || ||||||||||||    
T  50583055 cgatttcctctgttgccaatttcgttggg-taagtccatacaaaactttgatttgactttaaatg-gagccccgtaagtgagcggtgggattggtcctct 50583152  T
Q  100 cgaattagtcg 110  Q
    |||||||||||    
T  50583153 cgaattagtcg 50583163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 55371357 - 55371303
Alignment:
Q  72 cgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggata 126  Q
    |||||||||||| || ||||||||| |||| |||||||||| |||||||||||||    
T  55371357 cgcaagtgggcggtgggattggtcccctcggattagtcgatccttggatcggata 55371303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 39206193 - 39206156
Alignment:
Q  98 ctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  39206193 ctcgaattagtcgattcttagatcggatatcgagtttt 39206156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 50731298 - 50731237
Alignment:
Q  74 caagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||| || ||||||||| |||  |||||||||| ||||||||||||| ||||||||    
T  50731298 caagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50731237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 50781556 - 50781617
Alignment:
Q  74 caagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||| || ||||||||| |||  |||||||||| ||||||||||||| ||||||||    
T  50781556 caagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50781617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 32094841 - 32094757
Alignment:
Q  51 tctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||| ||||||||| | | |||| ||| ||| | || |||||||||||||  |||||||| ||||||||||||||| ||||||||    
T  32094841 tctgcctttaaatggggctcccgtaagcgggtggtgggattggtcctctcatattagtcggttcttggatcggataccgagtttt 32094757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 55287866 - 55287914
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttg 49  Q
    |||||||||||||||||||||| ||||||||| ||||||| | ||||||    
T  55287866 cgattccctctggtgccaattttgatgggctaggtccatacaaagcttg 55287914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 14343408 - 14343361
Alignment:
Q  15 gccaatttcgatgggctaagtccatatagagcttgctctgactttaaa 62  Q
    ||||||||| |||||||||||||||| ||| ||||||||| |||||||    
T  14343408 gccaatttcaatgggctaagtccatacagaacttgctctgcctttaaa 14343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 4252463 - 4252405
Alignment:
Q  68 cccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggata 126  Q
    ||||| ||||||| || || ||||||||| |||| |||||||||| |||||||||||||    
T  4252463 cccccacaagtggacggtgggattggtcccctcggattagtcgatccttggatcggata 4252405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 7195918 - 7196004
Alignment:
Q  49 gctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||| | ||||| || ||||||  || ||||||||| |||  |||||||||||||| |||  |||| ||||||||    
T  7195918 gctctgactttaaatgggccccccacatgtgggcagtgggattggtcccctcagattagtcgattctttgattagataccgagtttt 7196004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 25017620 - 25017685
Alignment:
Q  69 ccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||||| || ||||||| | || | |||||||||||||||||||| ||| ||||||||    
T  25017620 ccccgcaagtgggcggtgggattggttc-cttggattagtcgattcttggatcgaataccgagtttt 25017685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 26158941 - 26158999
Alignment:
Q  68 cccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggata 126  Q
    |||||||||||||||| || ||||| ||| |||| |||||||| | |||||||||||||    
T  26158941 cccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggata 26158999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 6041794 - 6041670
Alignment:
Q  13 gtgccaatttcgatgggctaagtccatatagagct-tgctctgactttaaatg-cgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcg 110  Q
    |||||||||||| |||  |||||||||| |||| | ||||||||||||||| |  | ||||| ||| |||||| || ||||| ||| ||   ||||||||    
T  6041794 gtgccaatttcggtggattaagtccatacagagttatgctctgactttaaacgaagcccccctcaaatgggcggtgagattgttccccttagattagtcg 6041695  T
Q  111 attcttggatcggatatcgagtttt 135  Q
     |||||||||| |||| ||||||||    
T  6041694 gttcttggatcagataccgagtttt 6041670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 3e-44; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 7766861 - 7766727
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||| | | |||||||||||||||| || ||||||||| |||    
T  7766861 cgattccctctggtgctaatttcggtgggctaagtccatacagagcttgctctgactttaaacggggcccccgcaagtgggcggtgggattggtcccctc 7766762  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||||||| |||||||||||||||||    
T  7766761 ggattagtcgattcttgaatcggatatcgagtttt 7766727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 4621371 - 4621237
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | |  ||||||||||||||| || ||||||||| |||    
T  4621371 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggtccccgcaagtgggcggtgggattggtcccctc 4621272  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  4621271 ggattagtcgattcttggatcggataccgagtttt 4621237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 15059536 - 15059402
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | |  ||||||||||||||| || ||||||||| |||    
T  15059536 cgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggtccccgcaagtgggcggtgagattggtcccctc 15059437  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||||| ||||||||    
T  15059436 gaattagtcgattcttggatcggataccgagtttt 15059402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 24122086 - 24122220
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | | |||||||||||||| || ||||||||| |||    
T  24122086 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctc 24122185  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  24122186 ggattagtcgattcttggatcggataccgagtttt 24122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 24674456 - 24674590
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  24674456 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 24674555  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||| ||||    
T  24674556 gtattagtcgattcttggatcggataccgaatttt 24674590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 30677240 - 30677373
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||| || ||||||||| |||||||||||||||||| || ||||||||| |||     
T  30677240 gattccctctggtgccaatttcggtgggctaagtccatacagagcttgctttggctttaaatgggacccccgcaagtgggcggtgggattggtcccctca 30677339  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
     |||||||| |||||||| |||||||||||||||    
T  30677340 gattagtcggttcttggaccggatatcgagtttt 30677373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 46607873 - 46608007
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |   |||||||||||||||| || ||||| ||| |||    
T  46607873 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaaaggcccccccgcaagtgggcggtgggattgatcccctc 46607972  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||| | ||||||||||||||||||||||    
T  46607973 ggattagtcggtccttggatcggatatcgagtttt 46608007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 17935832 - 17935965
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||| ||| |||||||||||| ||||||||||||||| |||| |||||||| ||||||| | | ||||||||||||||||||| ||||||||| |||    
T  17935832 cgattccttctagtgccaatttcggtgggctaagtccatacagagtttgctctggctttaaacggggcccccgcaagtgggcgatgggattggtccactc 17935931  T
Q  101 gaattagtcgattcttggatcggatatcgagttt 134  Q
    | |||||||||||||||||||||||| |||||||    
T  17935932 ggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 9500489 - 9500355
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| |   ||||| |||||||||| || ||||||||   ||    
T  9500489 cgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggagcccccacaagtgggcggtgagattggtctcttc 9500390  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||||||||||||    
T  9500389 ggattagtcgattcttggatcggatatcgagtttt 9500355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 7578472 - 7578606
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| |||||||||||||| ||||||||||||||| | ||||||||||||||||||| | | ||| |||||||||| | || ||||||| | |||    
T  7578472 cgattccctatggtgccaatttcggtgggctaagtccatacaaagcttgctctgactttaaacggggccctcgcaagtgggtggtgggattggttccctc 7578571  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||| |||| |||||||||||| ||||||||    
T  7578572 ggattagttgatttttggatcggataccgagtttt 7578606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 8077710 - 8077841
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||   | |||||||||||||||| || ||||||||| |||    
T  8077710 cgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctc 8077809  T
Q  101 gaattagtcgattcttggatcggatatcgagtt 133  Q
    | |||| |||||| |||||||||| | ||||||    
T  8077810 g-attaatcgattattggatcggagaccgagtt 8077841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 8254879 - 8254752
Alignment:
Q  8 ctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattag 107  Q
    |||||||| |||||||| |||||||||| |||| ||| ||||||||| ||||||| | | |||||||||||||||| || ||||| ||| || |||||||    
T  8254879 ctctggtgtcaatttcggtgggctaagttcatacagaacttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatccccttgaattag 8254780  T
Q  108 tcgattcttggatcggatatcgagtttt 135  Q
    |||||||||| |||||||| ||||||||    
T  8254779 tcgattcttgaatcggataccgagtttt 8254752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 7197380 - 7197247
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||| ||||||||||| |||| |||||| ||| ||| ||||||||| ||||||| | | |||| ||||||||||| || ||||||||| |||    
T  7197380 cgattccctctgatgccaatttcggtggg-taagtcaatacagaccttgctctggctttaaacgaggcccctgcaagtgggcggtgagattggtcccctc 7197282  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||| ||||||||||| ||||||||    
T  7197281 ggattagtcgattcatggatcggataccgagtttt 7197247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 18533857 - 18533724
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    ||||| |||| |||||||||||||||| |||||||||||||||||||| |||||||||||| | | |||| ||||||||||  || ||||||||| |||     
T  18533857 gattctctctagtgccaatttcgatggactaagtccatatagagcttgttctgactttaaacggggcccctgcaagtgggccgtgggattggtcccctca 18533758  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
     |||| ||||||||| ||||||||| | ||||||    
T  18533757 tattaatcgattcttagatcggataccaagtttt 18533724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 27455000 - 27454864
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaa--tgcgacccccgcaagtgggcgatgtgattggtcctc 98  Q
    |||||| ||||| ||||||||||| || |||||||||||| ||||||||||||| |||||||   ||  |||||||| ||||||| || ||||||||| |    
T  27455000 cgattcactctgatgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacgggccccccccgcatgtgggcggtgggattggtcccc 27454901  T
Q  99 tcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||| |||||||||||||||||||||||| | ||||||    
T  27454900 tcggattagtcgattcttggatcggatacctagtttt 27454864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 1378961 - 1379090
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||| ||||||||| |||||||| ||||||||||||||| ||| ||||||||| ||||||| | | ||||||||||||| || || ||||||||| |||    
T  1378961 cgatttcctctggtgtcaatttcggtgggctaagtccatacagaacttgctctggctttaaacg-ggcccccgcaagtggacggtgagattggtcccctc 1379059  T
Q  101 gaattagtcgattcttggatcggatatcgag 131  Q
      |||||||||||||| ||||||||| ||||    
T  1379060 agattagtcgattcttagatcggataccgag 1379090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 32729608 - 32729741
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||| ||||||||| |  ||||||||||||||| || ||||| ||| ||     
T  32729608 cgattccctatggtgccaatttcggtgggc-aagtccatacagagcttgctctggctttaaatggggtccccgcaagtgggcggtgggattgatcccctt 32729706  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||| |  |||||||||||| ||||||||    
T  32729707 ggattagtcggtctttggatcggataccgagtttt 32729741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 36156022 - 36155888
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||| ||||||||  |||||||||| |   ||||||   | |||||||| ||||||| || |||||||||  ||    
T  36156022 cgattccctctggtgccaatttcggtgggccaagtccatgcagagcttgctttagttttaaacagggcccccgcaggtgggcggtgggattggtcccttc 36155923  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
     ||||||||||||||||||||||||| ||||||||    
T  36155922 aaattagtcgattcttggatcggataccgagtttt 36155888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 21726792 - 21726917
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||| |||  ||||||| | | ||||| |||||||||| || | ||| ||| |||    
T  21726792 cgattccctttggtgccaatttcgatgggttaagtccatatagagcttgttctagctttaaacgggtcccccacaagtgggcggtggggttgatcccctc 21726891  T
Q  101 gaattagtcgattcttggatcggata 126  Q
      |||| |||||||||||||||||||    
T  21726892 agattaatcgattcttggatcggata 21726917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 40802191 - 40802069
Alignment:
Q  11 tggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcg 110  Q
    |||||||||||| |||| || ||||||||| ||||||||||||||||||||| | | |||| ||||||||| | || |||||||||||| ||||||||||    
T  40802191 tggtgccaattttgatgagc-aagtccatacagagcttgctctgactttaaacgggtcccc-gcaagtgggtggtgagattggtcctctagaattagtcg 40802094  T
Q  111 attcttggatcggatatcgagtttt 135  Q
    ||||||| |||| ||| ||||||||    
T  40802093 attcttgaatcgaataccgagtttt 40802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 168264 - 168371
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||||| |||||||||||| | ||| ||||| ||||| || || ||||||||| |||    
T  168264 cgattccctctggtgccaatttcggtgggctaagttcatacagagcttgttctgactttaaacgggactcccgctagtggccggtgggattggtcccctc 168363  T
Q  101 gaattagt 108  Q
    | ||||||    
T  168364 ggattagt 168371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 23734179 - 23734314
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaa-tgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    |||||||||||| ||||||||||| ||||||||||||||| |||| ||||| || |||||||  | | |||||||||||||||| ||  |||||||| ||    
T  23734179 cgattccctctgatgccaatttcggtgggctaagtccatacagagtttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattggtcccct 23734278  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |  ||||||||||||||| |||||||| | ||||||    
T  23734279 cagattagtcgattcttgaatcggataccaagtttt 23734314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 23741371 - 23741506
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaa-tgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    |||||||||||| ||||||||||| ||||||||||||||| |||| ||||| || |||||||  | | |||||||||||||||| ||  |||||||| ||    
T  23741371 cgattccctctgatgccaatttcggtgggctaagtccatacagagtttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattggtcccct 23741470  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |  ||||||||||||||| |||||||| | ||||||    
T  23741471 cagattagtcgattcttgaatcggataccaagtttt 23741506  T

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Target: chr1; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 45859177 - 45859043
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |  |||||||||  |||||||   | |||||||||||||| | |  ||||||||| |||    
T  45859177 cgattccctctggtgccaatttcggtgggctaagtccatacatcgcttgctcttgctttaaacagggcccccgcaagtgggtggtaggattggtcccctc 45859078  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||| |||| |||||||||||| ||| ||||    
T  45859077 ggattagttgattattggatcggataccgaatttt 45859043  T

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Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 18646916 - 18647041
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||||||||||||||| ||||||||||| ||| | || |||||||| ||||||| |   |||| | ||||||||| || ||||| ||| |||    
T  18646916 cgattctctctggtgccaatttcggtgggctaagtctatacaaagtttgctctggctttaaacggagcccctgtaagtgggcggtgagattgatcccctc 18647015  T
Q  101 gaattagtcgattcttggatcggata 126  Q
    ||||||||||||||||| ||||||||    
T  18647016 gaattagtcgattcttgaatcggata 18647041  T

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Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 29057471 - 29057363
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||| ||||||||||||||||   ||||| ||| ||||||||||||| |||| || | ||||||||||| ||||||||||||||||||| |||    
T  29057471 cgattccctcttgtgccaatttcgatggta-aagtctatacagagcttgctctggctttcaacgggacccccgcaaatgggcgatgtgattggtcccctc 29057373  T
Q  101 gaattagtcg 110  Q
     |||||||||    
T  29057372 aaattagtcg 29057363  T

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Target: chr1; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 23232399 - 23232299
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagctt----gctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcc 96  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||||    |||||| ||||||||| |||||||||||||||| | || |||||||||    
T  23232399 cgattccctctggcgccaatttcggtgggctaagtccatacagagcttgcaagctctggctttaaatgggacccccgcaagtgggtggtgggattggtcc 23232300  T
Q  97 t 97  Q
    |    
T  23232299 t 23232299  T

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Target: chr1; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 40146020 - 40145882
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgaccc-----ccgcaagtgggcgatgtgattggtc 95  Q
    ||||| ||||| ||||||||||   ||||||||||||||| ||||||||||||||||||||||| | |||     || |||||||| | || | ||||||    
T  40146020 cgatttcctctagtgccaatttatgtgggctaagtccatacagagcttgctctgactttaaatgggcccccacaaccacaagtgggtggtgagtttggtc 40145921  T
Q  96 ctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||| |||||||||||||||||||||||| ||||||||    
T  40145920 ccctcggattagtcgattcttggatcggata-cgagtttt 40145882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 7946907 - 7947001
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcc 96  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||  ||||||||| |  ||||||||||||| | || |||||||||    
T  7946907 cgattccctctggtgccaatttcggtgggctaagtctatacagagcttgctctcgctttaaatg-gggccccgcaagtgggtggtgagattggtcc 7947001  T

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Target: chr1; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 34778406 - 34778535
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    ||||||||||||| ||||||| | |||| |   |||||| |||| ||||| || ||||||| | | ||||||||||||| || || ||||||||| || |    
T  34778406 gattccctctggtaccaattttggtgggtt---tccatacagagtttgctttggctttaaacggggcccccgcaagtggacggtgggattggtccccttg 34778502  T
Q  102 aattagtcgattcttggatcggatatcgagttt 134  Q
     |||||||||||||||||||||||| |||||||    
T  34778503 gattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 8779854 - 8779745
Alignment:
Q  17 caatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattctt 116  Q
    |||||||| ||||||||||||||| | ||||| ||||  ||||||| | | ||||| ||||| |||| || ||||||||| |||| ||||||||||||||    
T  8779854 caatttcggtgggctaagtccatacacagcttactctagctttaaacggggcccccacaagtaggcggtgggattggtcccctcggattagtcgattctt 8779755  T
Q  117 ggatcggata 126  Q
     |||||||||    
T  8779754 agatcggata 8779745  T

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Target: chr1; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 22909975 - 22910068
Alignment:
Q  42 agagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||||||||||| |   |||||||||||||||| || |||| |||| |||| |||||||||| ||| ||||||||| ||||||||    
T  22909975 agagcttgctctgactttaaacggagcccccgcaagtgggcggtgggatttgtcccctcggattagtcgatacttcgatcggataccgagtttt 22910068  T

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Target: chr1; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 26513238 - 26513148
Alignment:
Q  44 agcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||||||||| | | ||||| |||||||||| || || |||||| |||| |||||||||||||||||||| ||| ||||||||    
T  26513238 agcttgctctgactttaaacggg-cccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagtttt 26513148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 48699889 - 48699956
Alignment:
Q  68 cccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||| || ||||| |||  ||| |||||||||||||||||||||||||||||||||    
T  48699889 cccccgcaagtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagtttt 48699956  T

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Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 1486481 - 1486617
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagc-ttgctctgactttaaatgcg--acccccgcaagtgggcgatgtgattggtcct 97  Q
    ||||||||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||  || | |   ||||||||||||| || || ||| |||||     
T  1486481 cgattccctttggtgccaatttcgatggg-taagtccatacagagctttgctctgacttagaacggggcccccccgcaagtggacggtgggatcggtccc 1486579  T
Q  98 ctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||  |||||||| | ||||||||||||| ||||||||    
T  1486580 ctccgattagtcggtccttggatcggataccgagtttt 1486617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 33905644 - 33905510
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||  |||||||| |||| |||||||||| |||| ||| |||| ||||||| | | || ||| |||||| || || ||||| ||| |||    
T  33905644 cgattccctctggtatcaatttcggtgggttaagtccatacagagtttgttctggctttaaacggggcctccgtaagtggacggtgggattgatcccctc 33905545  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
     ||||  ||||||||| ||||||||| ||||||||    
T  33905544 aaatttatcgattctttgatcggataccgagtttt 33905510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 37351595 - 37351454
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgc---------tctgactttaaatgcgacccccgcaagtgggcgatgtgatt 91  Q
    ||||||| |||| ||||||||||| ||||||||||||||| |||||||||         |||| ||||||| | | ||||| |||||||||| || ||||    
T  37351595 cgattccttctgatgccaatttcggtgggctaagtccatacagagcttgctctggaagctctggctttaaacg-ggcccccacaagtgggcggtgggatt 37351497  T
Q  92 ggtcctctcgaattagtcgattcttggatcggatatcgagttt 134  Q
    ||||| |||| |||||||| | ||||||||||||| |||||||    
T  37351496 ggtcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

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Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 2272408 - 2272541
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    ||||||||||| ||||||||||| |||||||||| |||| | || |||||||||||||||| | | ||||  |||| ||||| |  ||||| |||  |||    
T  2272408 gattccctctgatgccaatttcgctgggctaagttcatacaaagtttgctctgactttaaacggggcccctacaagggggcggtaggattgatcccatcg 2272507  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
     |||||||||||||  |||||||||  |||||||    
T  2272508 gattagtcgattctaagatcggatactgagtttt 2272541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 45331746 - 45331621
Alignment:
Q  11 tggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgac-ccccgcaagtgggcgatgtgattggtcctctcgaattagtc 109  Q
    ||||| |||||||| ||||||||||||||| |||||||||| || ||||||| | | | |||||||||||| || || ||||  ||| |||  |||| ||    
T  45331746 tggtggcaatttcggtgggctaagtccatacagagcttgctttggctttaaacggggctccccgcaagtggacggtgggattaatcccctcagattaatc 45331647  T
Q  110 gattcttggatcggatatcgagtttt 135  Q
    |||||||| |||||||| ||||||||    
T  45331646 gattcttgaatcggataccgagtttt 45331621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 133
Target Start/End: Original strand, 2783065 - 2783184
Alignment:
Q  14 tgccaatttcgatgggctaagtccatatagagctt-gctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgat 112  Q
    ||||||||||| ||| | ||||||||||||||||| ||||||  |||||||||  |  |||||||||| ||||| ||||  | ||||| ||||||||| |    
T  2783065 tgccaatttcggtggac-aagtccatatagagctttgctctggttttaaatgcagcatccgcaagtggacgatgagattaattctctcaaattagtcggt 2783163  T
Q  113 tcttggatcggatatcgagtt 133  Q
    |||||||||||||| ||||||    
T  2783164 tcttggatcggataacgagtt 2783184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 23041655 - 23041719
Alignment:
Q  71 ccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||| |  || ||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  23041655 ccgcaagtggacagtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 23041719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 25237123 - 25236990
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagag-cttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    ||||||||||| |||||||||||| ||||| ||||||||| ||||  ||||||||||||  ||||   || |||||||||| || ||  |||||||||||    
T  25237123 cgattccctctagtgccaatttcggtgggc-aagtccatacagagttttgctctgacttagaatggtgcctccgcaagtggacggtggaattggtcctct 25237025  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |  |||||||| | ||| ||||||||| ||||||||    
T  25237024 catattagtcggtcctttgatcggata-cgagtttt 25236990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 27159215 - 27159282
Alignment:
Q  68 cccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||| || || ||||||||| |||  ||||||||||  |||||||||||||||||||||    
T  27159215 cccccgcaagtggacggtgggattggtcccctcagattagtcgatctttggatcggatatcgagtttt 27159282  T

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Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 50202664 - 50202742
Alignment:
Q  56 ctttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||| | ||||| |||||||||||| ||  |||||||| |||| |||| ||||||||| ||||||||||||||||||    
T  50202664 ctttaaacgggaccctcgcaagtgggcggtggaattggtcccctcggattaatcgattctt-gatcggatatcgagtttt 50202742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 14603947 - 14603993
Alignment:
Q  89 attggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||| |||| |||||||||||||||||||||||| ||||||||    
T  14603947 attggtcccctcggattagtcgattcttggatcggataccgagtttt 14603993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32930812 - 32930873
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaa 62  Q
    ||||| ||||||||||| |||| | ||||||||||||||  ||||||||||||| |||||||    
T  32930812 cgatttcctctggtgcccattttggtgggctaagtccatgcagagcttgctctggctttaaa 32930873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 135
Target Start/End: Original strand, 35138116 - 35138185
Alignment:
Q  66 gacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||| || ||||| | | |||| |||||||| | ||||||||||||| ||||||||    
T  35138116 gacccccgcaagtgggcggtgggattgattccctcggattagtcggtccttggatcggataccgagtttt 35138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 88498 - 88577
Alignment:
Q  55 actttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagttt 134  Q
    |||||||||| | | || ||||||||||| |||||||||| |||||  ||||||||||   || ||||||||||||||||    
T  88498 actttaaatggggctccagcaagtgggcggtgtgattggttctctcagattagtcgatctatgaatcggatatcgagttt 88577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 2537762 - 2537864
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    |||||| | |||||||||||||| ||||||| |||||     |||||||| || ||||||| | | ||||||||||||||||  | ||||||||| ||||    
T  2537762 gattccatttggtgccaatttcggtgggctatgtcca-----agcttgctttggctttaaacgggccccccgcaagtgggcggagggattggtcccctcg 2537856  T
Q  102 aattagtc 109  Q
     |||||||    
T  2537857 gattagtc 2537864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 5315481 - 5315528
Alignment:
Q  88 gattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||| |||| || ||||||||||||||||||||| ||||||||    
T  5315481 gattggtcccctcggataagtcgattcttggatcggataccgagtttt 5315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 19480608 - 19480691
Alignment:
Q  12 ggtgccaatttcgatgggctaagtccatatagagct-tgctctgactttaaatgcg-acccccgcaagtgggcgatgtgattgg 93  Q
    |||||||||||   |||||||||||||||||||||| ||||||| ||||||||| | ||||||||| |||| || || ||||||    
T  19480608 ggtgccaattttagtgggctaagtccatatagagctatgctctggctttaaatgggtacccccgcacgtggacggtgggattgg 19480691  T

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Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 46113536 - 46113497
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccata 40  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  46113536 cgattccctctggtaccaatttcggtgggctaagtccata 46113497  T

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Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 47091751 - 47091818
Alignment:
Q  68 cccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||| | || |||||||||  |||| |||||  |||||||||||||||||||| ||||    
T  47091751 cccccgcaagtggggggtgggattggtccattcgatttagtaaattcttggatcggatatcgaatttt 47091818  T

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Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 12877038 - 12876965
Alignment:
Q  33 agtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaatta 106  Q
    |||||||| ||||||||||||  ||||||| | | ||||||||||||| || || ||||||||| |||| ||||    
T  12877038 agtccatacagagcttgctctagctttaaacggggcccccgcaagtggacggtgggattggtcccctcggatta 12876965  T

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Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 43770082 - 43769975
Alignment:
Q  17 caatttcgatgggctaagtccatatagagcttg-ctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattct 115  Q
    ||||||| |||||| ||||||||| ||||| |  ||||||| || |||| ||||||  ||| |||||| || |||||||||  |||||||||||||||||    
T  43770082 caatttcaatgggc-aagtccatacagagcataactctgaccttgaatgggacccca-caaatgggcggtgggattggtcccttcgaattagtcgattct 43769985  T
Q  116 tggatcggat 125  Q
     |||||||||    
T  43769984 aggatcggat 43769975  T

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Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 31162859 - 31162947
Alignment:
Q  47 ttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||  ||||||||| | ||| | |||||| ||  || |||||||| |||| ||||||||||| |||| |||||||| ||||||||    
T  31162859 ttgctctagctttaaatggggcccacacaagtgagcagtgagattggtcatctctaattagtcgatccttgaatcggataccgagtttt 31162947  T

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Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 36921596 - 36921513
Alignment:
Q  51 tctgactttaaatgcgaccccc-gcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagttt 134  Q
    |||| ||||||||| ||||||| |||||||| || || |||| |||| ||| |||||||||||| ||| |||||||| |||||||    
T  36921596 tctggctttaaatgggaccccccgcaagtggacggtgggattagtcc-ctcaaattagtcgattattgaatcggataccgagttt 36921513  T

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Target: scaffold0576 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 5216 - 5082
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | ||||||||| |||||| || ||||||||| |||    
T  5216 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctc 5117  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  5116 ggattagtcgattcttggatcggataccgagtttt 5082  T

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Target: scaffold0070 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 40388 - 40521
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  40388 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc-ctc 40486  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  40487 ggattagtcgattcttggatcggataccgagtttt 40521  T

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Target: scaffold0019 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 161872 - 162006
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||| |||| | |||||||||||||||| || ||||||||| |||    
T  161872 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggcttttaatggggcccccgcaagtgggcggtgggattggtcccctc 161971  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||||||||||| |||| ||||||||    
T  161972 ggattagtcgattcttggatcagataccgagtttt 162006  T

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Target: chr5 (Bit Score: 87; Significance: 7e-42; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 27498865 - 27498731
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  27498865 cgattccctctggtgccaatttcggtgggctaagtccatacatagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 27498766  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  27498765 ggattagtcgattcttggatcggataccgagtttt 27498731  T

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Target: chr5; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 8484794 - 8484661
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| ||||    
T  8484794 gattccctctggtgccaatttcggtgggctaagttcatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcg 8484695  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
     |||||||||||||||||||||||| ||||||||    
T  8484694 gattagtcgattcttggatcggataccgagtttt 8484661  T

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Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 18207270 - 18207404
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||| |||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  18207270 cgattccctccggtgccaatttcggtgggctaagtccatacagagcttgttctggctttaaacgaggcccccgcaagtgggcggtgggattggtcccctc 18207369  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  18207370 ggattagtcgattcttggatcggataccgagtttt 18207404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 7085760 - 7085626
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||| ||| |||||||| ||||||||||||||| ||||||||||||||||||||| | |  ||||||||||||||| || ||||||||| |||    
T  7085760 cgattccctctagtgtcaatttcggtgggctaagtccatacagagcttgctctgactttaaacggggtccccgcaagtgggcggtgggattggtcccctc 7085661  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||||||| |||||||| ||||||||    
T  7085660 ggattagtcgattcttgaatcggataccgagtttt 7085626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 11926635 - 11926501
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaa-tgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||  | | |||||||||||||| | || ||||||||| |||    
T  11926635 gattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggtggtgggattggtcccctc 11926536  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  11926535 ggattagtcgattcttggatcggataccgagtttt 11926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 15641239 - 15641106
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  15641239 cgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 15641140  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||| ||||||||| ||||||||    
T  15641139 ggattagtcgattctt-gatcggataccgagtttt 15641106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 19456340 - 19456211
Alignment:
Q  5 tccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaat 104  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||| ||||||||||| || ||||||||| |||| ||    
T  19456340 tccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccc-gcaagtgggcggtgggattggtcccctcggat 19456242  T
Q  105 tagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||| ||||||||    
T  19456241 tagtcgattcttggatcggataccgagtttt 19456211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 32059574 - 32059440
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||| |||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  32059574 cgattccttctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 32059475  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||| | ||||||||||||| ||||||||    
T  32059474 ggattagtcggtccttggatcggataccgagtttt 32059440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 34310205 - 34310339
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||||||||||| ||||||| | |||||||  |||||| || || ||||||||| |||    
T  34310205 cgattccctctggtgccaattttggtgggctaagtccatacagagcttgctctggctttaaacgggacccccataagtggacggtgggattggtcccctc 34310304  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||| ||||||||||||||||||| ||||||||    
T  34310305 gaattaatcgattcttggatcggataccgagtttt 34310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 38684271 - 38684404
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||| ||| || ||||||||| |||    
T  38684271 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacg-ggcccccgcaagtgagcggtgggattggtcccctc 38684369  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||| ||||    
T  38684370 ggattagtcgattcttggatcggataccgattttt 38684404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 35425082 - 35425210
Alignment:
Q  7 cctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaatta 106  Q
    ||||| |||||||||||| ||||||||||||||| |||||| |||||| ||||||| | | |||||||||||||||| || |||||||||||||| ||||    
T  35425082 cctctagtgccaatttcggtgggctaagtccatacagagctcgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggatta 35425181  T
Q  107 gtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||| ||| ||||    
T  35425182 gtcgattcttggatcggataccgaatttt 35425210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 6014406 - 6014280
Alignment:
Q  9 tctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagt 108  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||| ||||||| | |  || |||||||||||| || |||| |||| |||||||||||    
T  6014406 tctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaacggggtccacgcaagtgggcggtgagattagtcccctcgaattagt 6014307  T
Q  109 cgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||||||    
T  6014306 cgattcttggatcggatatcgagtttt 6014280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 30485891 - 30486025
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| |||||||| |||||||| ||||||||||||||| ||||||||||||| ||||||| |   |||||||||||||||| || ||||||||| |||    
T  30485891 cgattcactctggtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacgatgcccccgcaagtgggcggtgggattggtcccctc 30485990  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||| |||||||||||||||| ||||||||    
T  30485991 ggattagtcaattcttggatcggataccgagtttt 30486025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 33709635 - 33709503
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||   |||||| ||||||| | ||||||| |||||||||| || ||||||||| |||    
T  33709635 cgattccctctggtgccaatttcggtgggctaagtccatacagaga--gctctggctttaaacgggacccccacaagtgggcggtgggattggtcccctc 33709538  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| || |||||    
T  33709537 ggattagtcgattcttggatcggataccgtgtttt 33709503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 4603840 - 4603974
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||| |||||| ||||||| | | |||| |||||||| || || ||||||||| |||    
T  4603840 cgattccttctggtgccaatttcgatgggctaagtccatacagagctcgctctggctttaaacggggcccctgcaagtggacggtgggattggtcccctc 4603939  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||| | ||||||||||||| ||||||||    
T  4603940 ggattagtcggtccttggatcggataccgagtttt 4603974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 31288080 - 31287946
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| |||||||||||||| |||| |||||||||| | |||||||| |||||||||| | | |||||||||||||||| || ||||||||  |||    
T  31288080 cgattccctttggtgccaatttcggtgggttaagtccatacaaagcttgctttgactttaaacggggcccccgcaagtgggcggtgggattggtctcctc 31287981  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||| |||||||| |||||| ||||||||    
T  31287980 gaattagtcggttcttggaccggataccgagtttt 31287946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 19145545 - 19145412
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagctt-gctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||| ||||||||| | |||||||||||||||| || ||||||||| ||    
T  19145545 cgattccctctggtgccaatttcggtgggc-aagtccatacagagctttgctctggctttaaatg-gtcccccgcaagtgggcggtgggattggtcccct 19145448  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    || |||||| | ||||||||||||||| ||||||||    
T  19145447 cggattagttggttcttggatcggataccgagtttt 19145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 37495110 - 37495251
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacc-------cccgcaagtgggcgatgtgattgg 93  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||||||||||| ||||||| ||  ||       |||||||||||||| || ||||||    
T  37495110 cgattccctctggtgccaattttggtgggctaagtccatacagagcttgctctggctttaaacgcccccccccccgcccgcaagtgggcggtgggattgg 37495209  T
Q  94 tcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||| |||| |||||||||||||||||||||||| ||||||||    
T  37495210 tcccctcggattagtcgattcttggatcggataccgagtttt 37495251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 10869699 - 10869565
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||| |||||| ||||||||| ||||||||||||| |  |||||||||||| ||||||||| | || ||||||||||||| || ||||||||| |||    
T  10869699 cgattccatctggttccaatttcggtgggctaagtccacactgagcttgctctggctttaaatggggcctccgcaagtgggcggtgggattggtcccctc 10869600  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||| ||||||||||||||| | ||||||    
T  10869599 ggattagtcggttcttggatcggataccaagtttt 10869565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 13108583 - 13108459
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||  | |||| ||||||| | | |||||||||||||||| || ||||| ||| |||    
T  13108583 cgattccctctggtgccaattttgatgggctaagttcatacagagcaag-tctgcctttaaacggggcccccgcaagtgggcggtgggattgatcccctc 13108485  T
Q  101 gaattagtcgattcttggatcggata 126  Q
    ||||||||||||||||||||||||||    
T  13108484 gaattagtcgattcttggatcggata 13108459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 10399837 - 10399971
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtc-ctctc 100  Q
    ||||| |||||| ||||||||||||||||||||||||||  |||| ||||||||||||||| | | |||||| |||||| || || |||||||| | |||    
T  10399837 gattctctctggcgccaatttcgatgggctaagtccatacggagcatgctctgactttaaacggggcccccgtaagtggacggtgggattggtcaccctc 10399936  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||  ||| ||||||||    
T  10399937 gaattagtcgattcttggatcaaatagcgagtttt 10399971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 12398582 - 12398448
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| ||||| |||||||| ||| |||||| |||| ||||||||||||| ||||||||| | ||||||||| ||| || || ||||| |||||||    
T  12398582 cgattccctatggtgtcaatttcggtggcctaagttcatacagagcttgctctggctttaaatggggcccccgcaaatggacggtgagattgatcctctc 12398483  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
     ||||||||| ||||||||| ||||| ||||||||    
T  12398482 aaattagtcggttcttggattggataccgagtttt 12398448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 21236496 - 21236362
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| |||| ||| ||||||| |||||||||||||||| |||| || ||||||||||||| | | |||||||||||||||| || |||| |||| |||    
T  21236496 cgattctctctagtgtcaatttcaatgggctaagtccatacagagttttctctgactttaaacggggcccccgcaagtgggcggtgggattagtcccctc 21236397  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
      ||||||||||||||| |||||||| ||||||||    
T  21236396 agattagtcgattcttgaatcggataccgagtttt 21236362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 11465041 - 11464917
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||| |||||||||||||||| | |||||||||| |||| ||||||| ||||| ||||||| | | |||| ||||||||| | || ||||||||| |||    
T  11465041 cgatttcctctggtgccaattttggtgggctaagttcatacagagcttactctggctttaaacggggcccc-gcaagtgggtggtgggattggtcccctc 11464943  T
Q  101 gaattagtcgattcttggatcggata 126  Q
    ||||||||||||||||||||||||||    
T  11464942 gaattagtcgattcttggatcggata 11464917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 13038588 - 13038464
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||  | | || ||||||| | | |||||||||||||||| || ||||| ||| |||    
T  13038588 cgattccctctggtgccaattttgatgggctaagttcatacagagcaag-tatggctttaaacggggcccccgcaagtgggcggtgggattgatcccctc 13038490  T
Q  101 gaattagtcgattcttggatcggata 126  Q
    ||||||||||||||||||||||||||    
T  13038489 gaattagtcgattcttggatcggata 13038464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 5049202 - 5049333
Alignment:
Q  3 attccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcga 102  Q
    |||||||||||| ||||||||||||| |||||| |||| ||||||||||||| ||||||| | | ||||||||| ||| || || |||||||||  ||||    
T  5049202 attccctctggtaccaatttcgatggtctaagttcatacagagcttgctctggctttaaacg-ggcccccgcaaatggacggtgggattggtcccatcga 5049300  T
Q  103 attagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||| ||| | ||||||    
T  5049301 attagtcgattcttggatcgaataccaagtttt 5049333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 42193548 - 42193673
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||| |||||| ||||||||||| ||||||||||| ||| |||| ||||| || ||||||||| |||||| ||||||||||| || | |||||||||||    
T  42193548 cgatttcctctgatgccaatttcggtgggctaagtctatacagagtttgctttggctttaaatg-gacccc-gcaagtgggcggtggggttggtcctctc 42193645  T
Q  101 gaattagtcgattcttggatcggatatc 128  Q
    | ||||||||||||||||||| ||||||    
T  42193646 ggattagtcgattcttggatcagatatc 42193673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 9659429 - 9659311
Alignment:
Q  17 caatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattctt 116  Q
    |||||||| ||||||||||||||| | ||||||||||| ||||||||| | ||||||||||||| || || |||||||||  ||| |||||| |||||||    
T  9659429 caatttcggtgggctaagtccatacacagcttgctctggctttaaatgggccccccgcaagtggacggtgggattggtcccttcggattagttgattctt 9659330  T
Q  117 ggatcggatatcgagtttt 135  Q
    |||| ||||| ||||||||    
T  9659329 ggatgggataccgagtttt 9659311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 13659359 - 13659245
Alignment:
Q  21 ttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggat 120  Q
    ||||||||| |||||||||| ||| |||||| |||||||||| | |||||||||||||||||| || ||||| ||| |||| |||| |||||||||||||    
T  13659359 ttcgatgggttaagtccatagagaacttgctttgactttaaacgggacccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttggat 13659260  T
Q  121 cggatatcgagtttt 135  Q
    |||||| ||| ||||    
T  13659259 cggataccgaatttt 13659245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 25750741 - 25750613
Alignment:
Q  3 attccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcga 102  Q
    ||||| |||||||||||||||| |||| |||||||||||||||||||||||| |||  || | ||||||  |||||||| | || |||||||||  ||      
T  25750741 attccttctggtgccaatttcggtgggttaagtccatatagagcttgctctggctt--aacgggacccc--caagtggggggtgagattggtcccttcag 25750646  T
Q  103 attagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||| ||||||||    
T  25750645 attagtcgattcttggatcggataccgagtttt 25750613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 26009398 - 26009264
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| |||||||||||||  ||||||||||||||  ||||||| ||||| ||||||| | | ||||||||||||||   || |||| |||| |||    
T  26009398 cgattccctttggtgccaatttcagtgggctaagtccatgcagagcttactctggctttaaacggggcccccgcaagtgggtagtgggattagtcccctc 26009299  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||| |||||| |||| ||||||||||||    
T  26009298 ggattagtcggttcttgaatcgaatatcgagtttt 26009264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 15971256 - 15971151
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||| |||||| || |||||||| ||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||| || ||||| ||| |||    
T  15971256 cgatttcctctgatgtcaatttcggtgggctaagtccatacatagcttgctctgactttaaacgggacccccgcaagtgggcggtgagattgatcccctc 15971157  T
Q  101 gaatta 106  Q
    | ||||    
T  15971156 ggatta 15971151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 27487679 - 27487554
Alignment:
Q  11 tggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgaccccc-gcaagtgggcgatgtgattggtcctctcgaattagtc 109  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||  ||||||| | |  |||  ||||||||||| || ||||||||| |||| |||||||    
T  27487679 tggtgccaatttcggtggactaagtccatacagagcttgctctagctttaaacgggggcccttgcaagtgggcggtgggattggtcccctcggattagtc 27487580  T
Q  110 gattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||  |||||||    
T  27487579 gattcttggatcggatacagagtttt 27487554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 23270656 - 23270522
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||| |||| | ||||||||||| ||||||||||||||| |||||||||| || ||||||| |   ||||||||| ||| || || ||||||||| |||    
T  23270656 cgatttcctccgatgccaatttcggtgggctaagtccatacagagcttgctttggctttaaacggagcccccgcaaatggacggtgggattggtcccctc 23270557  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||| ||||||||||| ||||| | ||||||    
T  23270556 ggattagttgattcttggattggataccaagtttt 23270522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 36954881 - 36955006
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||| | |||||||  | |||||||||||| |||| ||||| || ||||||||| | ||||||||||||| |  || |||| |||| |||    
T  36954881 cgattccctctggttctaatttcggcgtgctaagtccatacagagtttgctttggctttaaatgggccccccgcaagtggactgtgggattagtcccctc 36954980  T
Q  101 gaattagtcgattcttggatcggata 126  Q
      ||||||||||||||||||||||||    
T  36954981 atattagtcgattcttggatcggata 36955006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 22693065 - 22693132
Alignment:
Q  68 cccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||| || ||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  22693065 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 22693132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25586995 - 25587056
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaa 62  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  25586995 cgatttcctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaa 25587056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 34049899 - 34050008
Alignment:
Q  26 tgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggat 125  Q
    ||||||||||||||| ||||||||||||| ||||||| | | ||||||||||||| || |  ||||||||| |||| |||||| ||||||   |||||||    
T  34049899 tgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtggtcggtaggattggtcccctcggattagttgattctcaaatcggat 34049998  T
Q  126 atcgagtttt 135  Q
    | ||||||||    
T  34049999 accgagtttt 34050008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 41351196 - 41351104
Alignment:
Q  42 agagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||| ||||||| | |  | ||||||||||||| || ||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  41351196 agagcttgctctggctttaaacg-gggctccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 41351104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 38631046 - 38630979
Alignment:
Q  68 cccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||| || ||||||||| |||| |||| ||||||||||||||||||| ||||||||    
T  38631046 cccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagtttt 38630979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 12317276 - 12317155
Alignment:
Q  9 tctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagt 108  Q
    ||||||| |||||||| |||| ||||||||    |||||||||||||||||||  | | |||||||||||||| | || ||||| ||| |||| ||||||    
T  12317276 tctggtgtcaatttcggtgggttaagtcca----gagcttgctctgactttaagcgggccccccgcaagtgggtggtgggattgatcc-ctcggattagt 12317182  T
Q  109 cgattcttggatcggatatcgagtttt 135  Q
    | |||||| ||||||||| ||||||||    
T  12317181 caattcttagatcggataccgagtttt 12317155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 22392796 - 22392885
Alignment:
Q  46 cttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||| ||||||| | | |||||||||||||||| ||  |||||||| |||  ||||||||||| |||||||||||| ||||||||    
T  22392796 cttgctctggctttaaacggggcccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagtttt 22392885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 31206307 - 31206440
Alignment:
Q  3 attccctctggtgccaatttcgatgggctaagtccatatagagct-tgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    |||||| ||||||||||||||  ||| ||||||||||| |||||| ||||||  ||||||||| ||||||| ||||||| || || |||||| |  ||||    
T  31206307 attccccctggtgccaatttcattggcctaagtccatacagagctatgctcttgctttaaatgggacccccacaagtggacggtgggattggactcctcg 31206406  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
     |||||||| | |||||  |||||| ||||||||    
T  31206407 gattagtcggtccttgggccggataccgagtttt 31206440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 38631095 - 38631050
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagc 46  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  38631095 cgattccctctggtgccaatttcgatgggctaagtccatacagagc 38631050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 5067392 - 5067458
Alignment:
Q  69 ccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||||| || ||||||||| |||  |||||||||||||||||||||| ||||| ||||    
T  5067392 ccccgcaagtgggcggtgggattggtcccctctgattagtcgattcttggatcggagatcgaatttt 5067458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15931122 - 15931182
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaa 62  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||| ||||||| |||||||    
T  15931122 cgattccctctggtgccaatttcggt-ggctaagtccatacagagcctgctctggctttaaa 15931182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 25548599 - 25548534
Alignment:
Q  70 cccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||  ||| || |||||||| |||||||||||||||||||||||||| ||| ||||||||    
T  25548599 cccgcaagtacgcggtgggattggtcatctcgaattagtcgattcttggatcgaataccgagtttt 25548534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 28614589 - 28614486
Alignment:
Q  31 taagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcga 130  Q
    |||||||||| | |||||| |||||||||||| | || ||| |||  ||| || || ||||| ||| |||||||||||||||| |||||||||||| |||    
T  28614589 taagtccatacaaagcttgttctgactttaaacgggatccc-gcagatggacggtgggattgatcccctcgaattagtcgatttttggatcggataccga 28614491  T
Q  131 gtttt 135  Q
    |||||    
T  28614490 gtttt 28614486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 930549 - 930486
Alignment:
Q  72 cgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||| |  |||||||||||| |||| |||||||| | ||||||||||||||||||||||    
T  930549 cgcaagtggacagtgtgattggtcccctcggattagtcggtccttggatcggatatcgagtttt 930486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 135
Target Start/End: Original strand, 7151437 - 7151500
Alignment:
Q  72 cgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||| ||| ||||  |||||||| || |||||||||||||||||||||||||| ||||||||    
T  7151437 cgcaagcgggtgatgaaattggtcccctagaattagtcgattcttggatcggataccgagtttt 7151500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 10631336 - 10631289
Alignment:
Q  88 gattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  10631336 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 10631289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 36895488 - 36895622
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagctt-gctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    |||||||||||||| ||||||||| ||| | ||||||||| | ||||| |||||| |||  || |   || |||||||||||||  | ||||| ||  ||    
T  36895488 cgattccctctggtaccaatttcggtggtc-aagtccatacaaagctttgctctggcttagaacgtagccgccgcaagtgggcggggggattgttctcct 36895586  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||| ||||||||||||||| ||||||||    
T  36895587 cgaattagtcggttcttggatcggataccgagtttt 36895622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 39229257 - 39229207
Alignment:
Q  85 tgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||| |||||||||||||| || || ||||||||||||||||||    
T  39229257 tgtgattggtcatctcgaattagtcggtttttagatcggatatcgagtttt 39229207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 18172898 - 18172978
Alignment:
Q  46 cttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggata 126  Q
    ||||||||||||||||||| ||||| || |||||| ||||  ||||||||  || | | |||||||||||||||| |||||    
T  18172898 cttgctctgactttaaatgggaccctcgtaagtggacgattggattggtctccttggagtagtcgattcttggattggata 18172978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 22253272 - 22253144
Alignment:
Q  8 ctctggtgccaatttcgatgggctaagtccatatagagct-tgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaatta 106  Q
    |||| |||||||||||||||||||||||||||| | |||| || ||||  |||||||| | ||||| ||| ||| |   | |||| |||| ||| |||||    
T  22253272 ctctagtgccaatttcgatgggctaagtccatacaaagctatgttctggatttaaatgaggcccccacaactggacagcgggattcgtcccctcaaatta 22253173  T
Q  107 gtcgattcttggatcggatatcgagtttt 135  Q
    ||||  |||||||||| ||| ||||||||    
T  22253172 gtcggatcttggatcgaataacgagtttt 22253144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 41569002 - 41568869
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||| ||||| ||| |||||||| ||| ||||||||||| |||  ||| | || ||||||||| || |||||||| |||| | || ||||||||| ||     
T  41569002 cgatttcctcttgtgtcaatttcggtggactaagtccatacagaatttgttttgtctttaaatg-gaaccccgcaaatgggtggtgggattggtccccta 41568904  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
      |||||| |||| || |||| |||||||||||||    
T  41568903 agattagttgattattcgatcagatatcgagtttt 41568869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1827664 - 1827616
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttg 49  Q
    |||||||||||| | ||||||||| |||| |||||||||| ||||||||    
T  1827664 cgattccctctgataccaatttcggtgggttaagtccatacagagcttg 1827616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 7e-42; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 33827707 - 33827573
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | |||||| ||||||||||| || ||||||||| ||     
T  33827707 cgattccctctggtgccaatttcgttgggctaagtccatacagagcttgctctggctttaaacgggacccctgcaagtgggcggtgggattggtcccctt 33827608  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  33827607 ggattagtcgattcttggatcggataccgagtttt 33827573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 44946187 - 44946053
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||| ||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  44946187 cgattccctttggtgccaatttcggtgggctaagtccatacagaacttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctc 44946088  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  44946087 ggattagtcgattcttggatcggataccgagtttt 44946053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 11941342 - 11941210
Alignment:
Q  3 attccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcga 102  Q
    ||||||| |||||||||||| | |||| |||||||||| ||||||||||||| ||||||| | |||||||||||||||||| || ||||||||| ||||     
T  11941342 attccctatggtgccaattttggtgggttaagtccatacagagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgg 11941243  T
Q  103 attagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||||||||||| ||||||||    
T  11941242 attagtcgattcttggatcggataccgagtttt 11941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 17324829 - 17324961
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||| | ||||| |||||||||| || |||| |||| |||    
T  17324829 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatg-ggcccccacaagtgggcggtgggattagtcccctc 17324927  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
     ||||||||||||||| ||||||||||||||||||    
T  17324928 aaattagtcgattctt-gatcggatatcgagtttt 17324961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 35171863 - 35171997
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||  ||||||||| ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  35171863 cgattccctctggcaccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 35171962  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||||||| |||||||| ||||||||    
T  35171963 ggattagtcgattcttgaatcggataccgagtttt 35171997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 15038022 - 15038156
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||| || ||||||| |   |||||||||||||||| || ||||||||| |||    
T  15038022 cgattccctttggtgccaatttcggtgggctaagtccatacagagcttgctttggctttaaacggagcccccgcaagtgggcggtgggattggtcccctc 15038121  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
      |||||||||||||||||||||||| ||||||||    
T  15038122 agattagtcgattcttggatcggataccgagtttt 15038156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 36390702 - 36390569
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||| |||||||||||||||||| ||| ||||||||||| | ||||||||||||||||||||| |||||||||||||||||| || ||||||||| |||    
T  36390702 cgatttcctctggtgccaatttcggtggactaagtccatacaaagcttgctctgactttaaatgggacccccgcaagtgggcggtgggattggtcc-ctc 36390604  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | || ||||||| |||| |||||||| ||||||||    
T  36390603 ggatcagtcgatacttgaatcggataccgagtttt 36390569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 5394080 - 5394214
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||| | || ||||||||||||| || |||||||||  ||    
T  5394080 cgattccctctggtgtcaatttcgatgggctaagtccatacagagtttgctctgactttaaatggggccgccgcaagtgggcggtgggattggtccgttc 5394179  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||| | ||| ||||||||| ||| ||||    
T  5394180 ggattagtcggtccttagatcggataccgaatttt 5394214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 13266553 - 13266686
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| |||||||||||||| || ||| ||||||||||| ||||||||||||| ||||||| | | |||| |||||||||  ||| ||||||||| |||    
T  13266553 cgattcactctggtgccaattccggtggactaagtccatacagagcttgctctggctttaaacggggcccc-gcaagtgggtaatgggattggtcccctc 13266651  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
     ||||||||||||||||||||||||||||||||||    
T  13266652 aaattagtcgattcttggatcggatatcgagtttt 13266686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 30466964 - 30466830
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| ||||| ||||||||||| ||||||||||||||| ||||||||||||| |||||||   | |||||||||||||||  || |||||||||  ||    
T  30466964 cgattctctctgctgccaatttcggtgggctaagtccatacagagcttgctctggctttaaaccgggcccccgcaagtgggcagtgggattggtcccttc 30466865  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  30466864 ggattagtcgattcttggatcggataccgagtttt 30466830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41329906 - 41330039
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||| |  |||||||||||||| ||||||||||||| ||||||||| | ||||| |||||||||| || ||||||||| |||    
T  41329906 cgattccctctggtgccaattttggcgggctaagtccata-agagcttgctctggctttaaatggggcccccacaagtgggcggtgagattggtcccctc 41330004  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
      |||||||| |||||||| |||||| ||||||||    
T  41330005 agattagtcggttcttggaccggataccgagtttt 41330039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 36242446 - 36242321
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||| |||||||| |||||||||||||   ||||||||||||| ||||||| | |  ||||||||||||||| || ||||||||| |||    
T  36242446 cgattccctctggtgtcaatttcggtgggctaagtccagccagagcttgctctggctttaaacggggtccccgcaagtgggcggtgggattggtcccctc 36242347  T
Q  101 gaattagtcgattcttggatcggata 126  Q
    | |||| |||||||||||||||||||    
T  36242346 ggattaatcgattcttggatcggata 36242321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 28668946 - 28669070
Alignment:
Q  11 tggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcg 110  Q
    |||||||||||||| ||| ||||||||||| |||||||||| || ||||||| | | ||||| |||||||||| || ||||||||| |||| ||||||||    
T  28668946 tggtgccaatttcggtggactaagtccatacagagcttgctttggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcg 28669045  T
Q  111 attcttggatcggatatcgagtttt 135  Q
    ||| |||||||||||| ||||||||    
T  28669046 atttttggatcggataccgagtttt 28669070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 24196067 - 24196199
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||| |||||||  ||  ||||||||||||||| || ||||||||| |||    
T  24196067 cgattccctctggtgcaaatttcggtgggctaagtccatacagaacttgctctggctttaaa--cgggccccgcaagtgggcggtgggattggtcccctc 24196164  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||| || ||| ||||| ||||||||    
T  24196165 ggattagtcgattttttgattggataccgagtttt 24196199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 2140617 - 2140486
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgaccccc-gcaagtgggcgatgtgattggtcctct 99  Q
    ||||||||||||||| |||||||| |||    |||||||| ||||||||||||| ||||||||| | ||||| ||||||||||| || ||||||||| ||    
T  2140617 cgattccctctggtgtcaatttcggtgg----agtccatacagagcttgctctggctttaaatgggcccccccgcaagtgggcggtgggattggtcccct 2140522  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    || ||||||||||| |||||||||||| ||||||||    
T  2140521 cggattagtcgattattggatcggataccgagtttt 2140486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 19054089 - 19054223
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccc-cgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||| |||||||  || |||| ||||||||||||||| |||||||||| || |||||||||  ||||| |||||||||||| || ||||||||| |||    
T  19054089 gattccttctggtgttaacttcggtgggctaagtccatacagagcttgctttggctttaaatggaaccccccgcaagtgggcggtgggattggtccgctc 19054188  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||||||||||| |||| ||||||||    
T  19054189 ggattagtcgattcttggatcagataccgagtttt 19054223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 10582124 - 10582014
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||  ||||||| | | ||| |||||||||||| || ||||||||| |||    
T  10582124 cgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctagctttaaacg-ggccctcgcaagtgggcg-tgggattggtcccctc 10582027  T
Q  101 gaattagtcgatt 113  Q
    |||||||||||||    
T  10582026 gaattagtcgatt 10582014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 25293229 - 25293356
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccc-cgcaagtgggcgatgtgattggtcctct 99  Q
    |||||||||||||||||||||||| |||||||||| ||||        |||||| ||||||| | | |||| ||||||||||||||| ||||||||| ||    
T  25293229 cgattccctctggtgccaatttcggtgggctaagttcata--------gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccct 25293320  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    || |||||||||||||||||||||||| ||||||||    
T  25293321 cggattagtcgattcttggatcggataccgagtttt 25293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41314055 - 41314188
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||||||| | ||  ||||||||||| || || ||||||||| |||    
T  41314055 cgattccctctggtgtcaatttcggtgggctaagtctatacagagcttgctctgactttaaacggga-tcccgcaagtggacggtgggattggtcccctc 41314153  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
      |||| ||||||||| ||||||||| | ||||||    
T  41314154 agattaatcgattcttcgatcggataccaagtttt 41314188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 43374459 - 43374330
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||||||  ||| | ||||||||||| ||||||      |||||||||||| ||| || |||||||||  ||    
T  43374459 cgattccctctggtgccaatttcggtgggctaagtttatacaaagcttgctctggctttaag-----cccccgcaagtgagcggtgggattggtcccttc 43374365  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| ||||||||    
T  43374364 ggattagtcgattcttggatcggataccgagtttt 43374330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 23787141 - 23787060
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcg 83  Q
    ||||||||||||||||||||||| |||||||| |||||| |||| |||||||||||||||||| |||| |||||||||||||    
T  23787141 gattccctctggtgccaatttcggtgggctaaatccatacagagtttgctctgactttaaatgggacctccgcaagtgggcg 23787060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 34516530 - 34516414
Alignment:
Q  18 aatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttg 117  Q
    ||||||| ||||||||||||||| ||||||||||||  ||||||| | | |||| ||||||||||| || ||||||||| |||| |||||||||||||||    
T  34516530 aatttcggtgggctaagtccatacagagcttgctctcgctttaaacggg-cccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 34516432  T
Q  118 gatcggatatcgagtttt 135  Q
    ||||||||| | ||||||    
T  34516431 gatcggataccaagtttt 34516414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 3943810 - 3943937
Alignment:
Q  8 ctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattag 107  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||||| ||||||| | | | |||||||||||| | || ||||||||| || | |||||    
T  3943810 ctctggtgccaatttcggttggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggtggtgggattggtccccttggattag 3943909  T
Q  108 tcgattcttggatcggatatcgagtttt 135  Q
    ||| || |||||||||||| | ||||||    
T  3943910 tcggttattggatcggataccaagtttt 3943937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 27269467 - 27269344
Alignment:
Q  12 ggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcga 111  Q
    |||| |||||||| ||||||||||||||||||| ||||||||| |||||||     | |||||||||||||| || ||||| ||| |||| |||||||||    
T  27269467 ggtgtcaatttcggtgggctaagtccatatagaacttgctctggctttaaacagccctcccgcaagtgggcggtgggattgatcccctcggattagtcga 27269368  T
Q  112 ttcttggatcggatatcgagtttt 135  Q
    ||||||||| ||||| ||||||||    
T  27269367 ttcttggataggataccgagtttt 27269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 19849912 - 19850017
Alignment:
Q  17 caatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattctt 116  Q
    |||||| ||||| ||||||| ||| ||||||||||||| |||||||   | |||||||||||||||| || ||||||||||||| ||||| |||||||||    
T  19849912 caattttgatggactaagtctatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgagattggtcctctcaaattaatcgattctt 19850011  T
Q  117 ggatcg 122  Q
    ||||||    
T  19850012 ggatcg 19850017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 45271447 - 45271572
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||||| |   |||| ||||||| |||  | ||||| ||| |||    
T  45271447 cgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacgaagcccctgcaagtgagcggagagattgatcccctc 45271546  T
Q  101 gaattagtcgattcttggatcggata 126  Q
     ||||||||||||||| ||| |||||    
T  45271547 aaattagtcgattctttgattggata 45271572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 44976288 - 44976172
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgac-ccccgcaagtgggcgatgtgattggtcctct 99  Q
    |||||||||||||||||||||| | ||||||||||||||| |||| |||||||| ||||||| | | | ||||||||||||||| || ||||| |||  |    
T  44976288 cgattccctctggtgccaattttggtgggctaagtccatacagagtttgctctggctttaaacggggctccccgcaagtgggcggtgggattgatccctt 44976189  T
Q  100 cgaattagtcgattctt 116  Q
    || ||||||||||||||    
T  44976188 cggattagtcgattctt 44976172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 4567571 - 4567429
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcg--------atgtgattg 92  Q
    ||||| |||||||||||||||||| |||||||| |||||| |||||||| |||| ||||||| | | ||||| ||||||||||         || |||||    
T  4567571 cgatttcctctggtgccaatttcggtgggctaaatccatacagagcttgttctggctttaaacggggcccccacaagtgggcggtgggattgtgggattg 4567472  T
Q  93 gtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||| ||||||| |||||||||||||||| | ||||||    
T  4567471 gtcctctcggattagtcaattcttggatcggatacccagtttt 4567429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 714244 - 714125
Alignment:
Q  16 ccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattct 115  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||||| |   ||||||||| |||||| || | || |||| |||  |||||||||||||    
T  714244 ccaatttcggtgggctaagtccatagagagtttgctctgactttaaacggagcccccgcaaatgggcggtgggtttcgtcccctcagattagtcgattct 714145  T
Q  116 tggatcggatatcgagtttt 135  Q
    | ||| ||||| ||||||||    
T  714144 tagattggataccgagtttt 714125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 8192485 - 8192352
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagctt-gctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||| |||  || | | ||| |||||||||||| || |||||| || ||    
T  8192485 cgattccctctggtgccaatgtcggtgggc-aagtccatatagagctttgctctggcttagaacg-gcccctcgcaagtgggcggtgggattgggcccct 8192388  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    || |||||||| | ||||||||||||| ||||||||    
T  8192387 cggattagtcggtccttggatcggataccgagtttt 8192352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 18976521 - 18976455
Alignment:
Q  69 ccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  18976521 ccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaatttt 18976455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 27290651 - 27290729
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtg 79  Q
    |||||||||  ||||||||||||| ||||||||||||||| ||||||||||||| ||||||| | | ||||||||||||    
T  27290651 cgattcccttcggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtg 27290729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 31778138 - 31778228
Alignment:
Q  45 gcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||| ||||||||| | ||||||||||||| || || |||||||||||||  |||||||  ||||||||||||||| ||||||||    
T  31778138 gcttgctctggctttaaatggggcccccgcaagtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagtttt 31778228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 4769259 - 4769356
Alignment:
Q  31 taagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatc 128  Q
    |||||||||| ||||||||||||| ||||||| | |  |||||||||||| || || | ||||||| ||| ||||||||||||||| |||||||||||    
T  4769259 taagtccatacagagcttgctctggctttaaacgggggccccgcaagtggacggtgaggttggtcccctcaaattagtcgattcttagatcggatatc 4769356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5608168 - 5608107
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaa 62  Q
    |||||| |||||||| |||||| | |||||||||||||||||||||||||||||||||||||    
T  5608168 cgattctctctggtgtcaattttggtgggctaagtccatatagagcttgctctgactttaaa 5608107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 135
Target Start/End: Original strand, 18692088 - 18692157
Alignment:
Q  66 gacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||| |||||||||| || ||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  18692088 gacccccacaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagtttt 18692157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 135
Target Start/End: Complemental strand, 44929915 - 44929846
Alignment:
Q  66 gacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||||| || || ||||||||| || |||||||||||||||||||||||||| ||||||||    
T  44929915 gacccccgcaagtggacggtgggattggtccccttgaattagtcgattcttggatcggataccgagtttt 44929846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 8258960 - 8259094
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||  |||||||| | |||| |||||||||| ||| |||| |||| ||||||  | | ||||||||||| |||| || |||| || |  ||    
T  8258960 cgattccctctgacgccaattttggtgggttaagtccatacagatcttgttctggctttaatcggggcccccgcaagtaggcggtgggattagttccttc 8259059  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||||||||||||||||  |||||||    
T  8259060 ggattagtcgattcttggatcggatactgagtttt 8259094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 39957891 - 39957955
Alignment:
Q  71 ccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||| ||||||| | |||| |||||||||||||||||| ||||| ||||||||    
T  39957891 ccgcaagtgggcgatgggattggttccctcggattagtcgattcttggattggataccgagtttt 39957955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 1191579 - 1191694
Alignment:
Q  4 ttccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaa 103  Q
    |||||||| || ||||||||| ||||||||||||||| |||| |||||||| ||||||| |    ||||| |||||  || ||  |||| ||| ||||||    
T  1191579 ttccctctagtaccaatttcggtgggctaagtccatacagagtttgctctggctttaaacggtgtccccgaaagtgaacggtggaattgttcccctcgaa 1191678  T
Q  104 ttagtcgattcttgga 119  Q
    ||||||||||||||||    
T  1191679 ttagtcgattcttgga 1191694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 6714374 - 6714295
Alignment:
Q  56 ctttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||| | ||| ||||||||||| || || ||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  6714374 ctttaaacgggactcccgcaagtggacggtgagattggtcccctcaaattagtcgattcttggattggataccgagtttt 6714295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 918831 - 918782
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgc 50  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||||||||    
T  918831 cgattccctcttgtgccaatttcgttgggctaagtccatacagagcttgc 918782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 19605907 - 19605846
Alignment:
Q  74 caagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||| || ||||||||| ||||||||||| ||  ||||||||||||||||||||||    
T  19605907 caagtgggcggtgagattggtcccctcgaattagttgacacttggatcggatatcgagtttt 19605846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 44610143 - 44610236
Alignment:
Q  42 agagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||||  ||||||||| | |||| ||||||||||| || |||||||||  ||| |||||||| |||||||| || ||| ||||||||    
T  44610143 agagcttgctctagctttaaatggggcccctgcaagtgggcggtgggattggtcccatcggattagtcggttcttggaccgaataccgagtttt 44610236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 14486955 - 14487022
Alignment:
Q  68 cccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||| ||||||||||| || ||||||||| |||| |||||||| | ||||||||||||| ||||||||    
T  14486955 cccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 14487022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 32845154 - 32845193
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccata 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  32845154 cgattccctctggtgccaatttcggtgggctaagtccata 32845193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 45132398 - 45132475
Alignment:
Q  49 gctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggata 126  Q
    |||||| ||||||| | | ||||| |||||||||  |  |||||||||||||| |||| |||||||||||||||||||    
T  45132398 gctctggctttaaacggggcccccacaagtgggcagtaggattggtcctctcggattaatcgattcttggatcggata 45132475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 1845095 - 1845049
Alignment:
Q  89 attggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||| ||| ||||||||||||||||| ||||||| ||||||||    
T  1845095 attggtcccctcaaattagtcgattcttggctcggataccgagtttt 1845049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 27290729 - 27290771
Alignment:
Q  93 gtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||| |||| |||||||||||||||||||||||| ||||||||    
T  27290729 gtcccctcggattagtcgattcttggatcggataccgagtttt 27290771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 13089012 - 13089077
Alignment:
Q  70 cccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||| || |||||||||||||  |||| ||| || |||| ||||||| ||||||||    
T  13089012 cccgcaagtgggcggtgagattggtcctctcagattattcggtttttgggtcggataccgagtttt 13089077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 29361616 - 29361745
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||| |||||| || |||||||| ||| |||||||||    ||||||||  || ||||||| | || ||||||||||||||  || ||||| ||  |||    
T  29361616 cgatttcctctgatgtcaatttcggtggactaagtcca----gagcttgccgtggctttaaacg-gagccccgcaagtgggcagtgggattgatctcctc 29361710  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||| | ||||| ||||||||||||||||||||    
T  29361711 ggattaattgattcctggatcggatatcgagtttt 29361745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 4852660 - 4852716
Alignment:
Q  69 ccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggat 125  Q
    |||||||||||| || ||  |||||||| |||| |||| ||||||||||||||||||    
T  4852660 ccccgcaagtggacggtggaattggtcccctcggattaatcgattcttggatcggat 4852716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 19517022 - 19517066
Alignment:
Q  18 aatttcgatgggctaagtccatatagagcttgctctgactttaaa 62  Q
    ||||| ||||||||||||||||| |||||||||| || |||||||    
T  19517022 aattttgatgggctaagtccatacagagcttgctttggctttaaa 19517066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 32845206 - 32845254
Alignment:
Q  68 cccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattctt 116  Q
    |||| ||||||||||| || |||||||||  ||||||||||||||||||    
T  32845206 cccctgcaagtgggcggtgggattggtcccttcgaattagtcgattctt 32845254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 38341844 - 38341924
Alignment:
Q  46 cttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggata 126  Q
    |||||||||||||||||||    |||||||||||  || ||||||||  |||||| ||||| || |||||| |||||||||    
T  38341844 cttgctctgactttaaatggcttccccgcaagtgaacggtgtgattgaccctctcaaattaatcaattcttagatcggata 38341924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 1190 - 1057
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||| | ||||||||||||| || || ||||||||| |||    
T  1190 cgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtggacggtgggattggtcccctc 1091  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||| ||||||||| ||||||||    
T  1090 gaattagtcgattctt-gatcggataccgagtttt 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 9433 - 9300
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||| | ||||||||||||| || || ||||||||| |||    
T  9433 cgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtggacggtgggattggtcccctc 9334  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    |||||||||||||||| ||||||||| ||||||||    
T  9333 gaattagtcgattctt-gatcggataccgagtttt 9300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 12134 - 12019
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||| ||||||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||| |  |||| ||||||| || || ||||||||| |||    
T  12134 cgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatg-gggccccacaagtggacggtgggattggtcccctc 12036  T
Q  101 gaattagtcgattcttg 117  Q
    ||||||||| |||||||    
T  12035 gaattagtcaattcttg 12019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 7443 - 7309
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  7443 cgattccctccggtgccaatttcggtgggctaagtccatacagagctttctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 7344  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||||||||||||| | ||||||    
T  7343 ggattagtcgattcttggatcggataccaagtttt 7309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 39155 - 39289
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||| |||| |||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  39155 cgattccctctggtgccaatttcggtgggctatgtccatacagaacttgttctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 39254  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||||||||||| |||| ||||||||    
T  39255 ggattagtcgattcttggatcagataccgagtttt 39289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 53005 - 52871
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| ||||| || |||||| ||||||||||||| ||||||| | | |||||||| ||||||| |  |||||||||||||    
T  53005 cgattccctctggtgccaatttcggtgggcaaaatccatacagagcttgctctggctttaaacggggcccccgcaggtgggcggtaggattggtcctctc 52906  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | ||||||||||||||| |||||||| ||||||||    
T  52905 ggattagtcgattcttgaatcggataccgagtttt 52871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 32351 - 32484
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||| ||||||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||| | |||||||||||||| | || ||||||||| |||    
T  32351 cgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatgtggcccccgcaagtgggtggtgggattggtcccctc 32450  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||| ||||||||| ||||||||    
T  32451 ggattagtcgattctt-gatcggataccgagtttt 32484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 20286 - 20418
Alignment:
Q  2 gattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcg 101  Q
    |||||||||||||||||||||| |||||||||||||||| | ||||||||||| ||||||| | |||||||||||||||||| |   |||| | ||||||    
T  20286 gattccctctggtgccaatttcaatgggctaagtccatacatagcttgctctggctttaaacgggacccccgcaagtgggcggtaaaattgat-ctctcg 20384  T
Q  102 aattagtcgattcttggatcggatatcgagtttt 135  Q
     ||||||| ||||||||| |||||| ||||||||    
T  20385 gattagtcaattcttggaccggataccgagtttt 20418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 10827 - 10695
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||| ||||||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||| |  |||| ||||||| || || ||||||||| |||    
T  10827 cgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatg-gggccccacaagtggacggtgggattggtcccctc 10729  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||| |||||| ||||||||| ||||||||    
T  10728 gaattagtcaattctt-gatcggataccgagtttt 10695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 41778 - 41645
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||||||| || ||||||||| || |||||||||||| ||||||||||||| ||||||| | | |||| |||||||||| ||| ||||||||| |||    
T  41778 cgattccctcttgttccaatttcgttgtgctaagtccatacagagcttgctctggctttaaacggggcccctgcaagtgggcaatgggattggtcccctc 41679  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||||||||| |||||||||  |||||||    
T  41678 ggattagtcgattctt-gatcggatacagagtttt 41645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 13178 - 13047
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||   |||||||| | | ||||||||||||| || || ||||| ||| |||    
T  13178 cgattccctctggtgccaatttcggtgggttaagtccatacagagcttgct---actttaaacggggcccccgcaagtggacggtgggattgatcccctc 13082  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
      |||||| ||||||||||||||||| ||||||||    
T  13081 agattagttgattcttggatcggataccgagtttt 13047  T

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Target: scaffold0328; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 15056 - 15178
Alignment:
Q  3 attccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcga 102  Q
    |||||||||||||| ||||||| |||| |||||||||  ||||||||||||| ||||||||| | ||||||||||||||||  | ||||||||  ||||     
T  15056 attccctctggtgctaatttcggtgggttaagtccatccagagcttgctctggctttaaatgggccccccgcaagtgggcg-ggggattggtctcctcgg 15154  T
Q  103 attagtcgattcttggatcggata 126  Q
    ||||||| ||||||||||||||||    
T  15155 attagtcaattcttggatcggata 15178  T

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Target: scaffold1175 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 2535 - 2426
Alignment:
Q  26 tgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggat 125  Q
    ||||||||||||||| ||||||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||| |||||||  | |||| |||||||    
T  2535 tgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggat 2436  T
Q  126 atcgagtttt 135  Q
    | ||||||||    
T  2435 accgagtttt 2426  T

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Target: scaffold0049 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 66825 - 66951
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctctc 100  Q
    ||||||| |||||||||||||| | |||||||||||        |||||||||| ||||||| | | |||||||||||||||| || ||||||||| |||    
T  66825 cgattccttctggtgccaattttggtgggctaagtc--------gcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctc 66916  T
Q  101 gaattagtcgattcttggatcggatatcgagtttt 135  Q
    | |||||||| | ||||||||||||| ||||||||    
T  66917 ggattagtcggtccttggatcggataccgagtttt 66951  T

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Target: scaffold0199 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 8513 - 8451
Alignment:
Q  73 gcaagtgggcgatgtgattggtcctctcgaattagtcgattcttggatcggatatcgagtttt 135  Q
    ||||||||||| || ||||||||| |||| |||||||||||||| ||||||||| ||||||||    
T  8513 gcaagtgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagtttt 8451  T

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Target: scaffold0717 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 92 - 1
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagcttgctctgactttaaatgcgacccccgcaagtgggcgatgtgattg 92  Q
    |||||||||||  || |||||||||||||||||||||||| |||| |||||||  ||||||| | | ||||| || ||||||| || |||||    
T  92 cgattccctcttatgtcaatttcgatgggctaagtccatacagagtttgctctagctttaaacggggcccccacatgtgggcggtgggattg 1  T

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Target: scaffold0160 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 29276 - 29143
Alignment:
Q  1 cgattccctctggtgccaatttcgatgggctaagtccatatagagctt-gctctgactttaaatgcgacccccgcaagtgggcgatgtgattggtcctct 99  Q
    |||||||| ||| ||||| ||||| | || |||||||||| ||||||| |||||| ||| ||||| ||||||||||| ||| |  || ||||||||| ||    
T  29276 cgattcccgctgatgccattttcggtcgg-taagtccatacagagctttgctctggcttaaaatg-gacccccgcaaatggacagtgggattggtcccct 29179  T
Q  100 cgaattagtcgattcttggatcggatatcgagtttt 135  Q
    |  |||||||  | ||||||||||||| ||||||||    
T  29178 cagattagtcagtccttggatcggataccgagtttt 29143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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