View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20627_low_5 (Length: 528)
Name: NF20627_low_5
Description: NF20627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20627_low_5 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 350; Significance: 0; HSPs: 11)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 134 - 511
Target Start/End: Original strand, 16184755 - 16185132
Alignment:
| Q |
134 |
caattggatggatacctccggcaaaagaaatgaatgcaattcatgaggtttacaagattgcaagagcacaaacacttattgcgttgtgcagtactgttcc |
233 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16184755 |
caattggatggatacctccggcaaaagaaatgaatgcaattcatgaggtttacaagattgcaagagcacaaacacttattgcgttgtgcagtactgttcc |
16184854 |
T |
|
| Q |
234 |
gggttactggttcacagtagcgtttatcgatcacatgggtcgtttcgctattcaaatgatgggattcttcttcatgactgttttcatgtttgctcttgca |
333 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
16184855 |
gggttactggttcacggtagcatttatcgatcacatgggtcgtttcgctattcaaatgatgggattcttcttcatgactgttttcatgtttgcacttgcc |
16184954 |
T |
|
| Q |
334 |
ataccatatgatcattggagcaaggaagagaatagaattgggtttgtggtaatgtactcactcacattcttctttgctaattttggtccaaatgctacga |
433 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16184955 |
ataccatatgatcattggagcaaggaagagaatagaattgggtttgttgtaatgtactcactcacattcttctttgctaattttggtccaaatgctacga |
16185054 |
T |
|
| Q |
434 |
catttgttgtaccggcagagatttttccggctaggttaaggtctacctgtcatggaatatcagctgctgcaggaaagg |
511 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
16185055 |
catttgttgtaccggcagagatttttccggctaggctaaggtctacctgtcatggaatctcagctgctgcaggaaagg |
16185132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 134 - 511
Target Start/End: Original strand, 16224145 - 16224522
Alignment:
| Q |
134 |
caattggatggatacctccggcaaaagaaatgaatgcaattcatgaggtttacaagattgcaagagcacaaacacttattgcgttgtgcagtactgttcc |
233 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16224145 |
caatcggatggatccctccggcaaaagaaatgaatgcaattcatgaggtttacaagattgcaagagcacaaacacttattgcgttgtgcagtactgttcc |
16224244 |
T |
|
| Q |
234 |
gggttactggttcacagtagcgtttatcgatcacatgggtcgtttcgctattcaaatgatgggattcttcttcatgactgttttcatgtttgctcttgca |
333 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
16224245 |
gggttactggttcacagtagcgtttatcgatcacatgggtcgtttcgctattcaaatgatgggattcttcttcatgactgttttcatgtttgcacttgcc |
16224344 |
T |
|
| Q |
334 |
ataccatatgatcattggagcaaggaagagaatagaattgggtttgtggtaatgtactcactcacattcttctttgctaattttggtccaaatgctacga |
433 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16224345 |
ataccatatgatcattggagcaaggaagagaatagaattgggtttgttgtaatatactcactcacattcttctttgctaattttggtccaaatgctacga |
16224444 |
T |
|
| Q |
434 |
catttgttgtaccggcagagatttttccggctaggttaaggtctacctgtcatggaatatcagctgctgcaggaaagg |
511 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
16224445 |
catttgttgtaccggcagagatttttccggctaggttaaggtctacctgtcatggaatctcagctgctgcaggaaagg |
16224522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 134 - 511
Target Start/End: Complemental strand, 16174607 - 16174230
Alignment:
| Q |
134 |
caattggatggatacctccggcaaaagaaatgaatgcaattcatgaggtttacaagattgcaagagcacaaacacttattgcgttgtgcagtactgttcc |
233 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16174607 |
caatcggatggatccctccggcaaaagaaatgaatgcaattcatgaggtttacaagattgcaagagcacaaacacttattgcgttgtgcagtactgttcc |
16174508 |
T |
|
| Q |
234 |
gggttactggttcacagtagcgtttatcgatcacatgggtcgtttcgctattcaaatgatgggattcttcttcatgactgttttcatgtttgctcttgca |
333 |
Q |
| |
|
||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16174507 |
gggctactggttcacagtcgcatttatcgatcacatgggtcgtttcgctattcaaatgatgggattcttcttcatgactgttttcatgtttgctcttgcc |
16174408 |
T |
|
| Q |
334 |
ataccatatgatcattggagcaaggaagagaatagaattgggtttgtggtaatgtactcactcacattcttctttgctaattttggtccaaatgctacga |
433 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
16174407 |
ataccatatgatcattggagcaaggaagagaatagaattgggtttgttgtaatgtactcactaacattcttctttgctaattttggtccaaatgctacaa |
16174308 |
T |
|
| Q |
434 |
catttgttgtaccggcagagatttttccggctaggttaaggtctacctgtcatggaatatcagctgctgcaggaaagg |
511 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16174307 |
catttgttgtaccggcagagatttttccggctaggttaaggtctacctgtcatggaatatcagctgctgcaggaaagg |
16174230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 136 - 511
Target Start/End: Original strand, 33109857 - 33110232
Alignment:
| Q |
136 |
attggatggatacctccggcaaaagaaatgaatgcaattcatgaggtttacaagattgcaagagcacaaacacttattgcgttgtgcagtactgttccgg |
235 |
Q |
| |
|
||||| ||||| ||||| ||||||||||||||||||||| | || | || | |||||||||||||||||| ||||| || ||||||||||| || || | |
|
|
| T |
33109857 |
attgggtggatccctccagcaaaagaaatgaatgcaattaacgaactgtataggattgcaagagcacaaacccttatagcattgtgcagtacagtgccag |
33109956 |
T |
|
| Q |
236 |
gttactggttcacagtagcgtttatcgatcacatgggtcgtttcgctattcaaatgatgggattcttcttcatgactgttttcatgtttgctcttgcaat |
335 |
Q |
| |
|
|||||||||| ||||| || ||||||||| ||||||||||||| || || ||| ||||||| |||||||||||||| || |||||||||||||| || || |
|
|
| T |
33109957 |
gttactggtttacagtggcatttatcgattacatgggtcgttttgcgatccaattgatgggtttcttcttcatgaccgtcttcatgtttgctctagctat |
33110056 |
T |
|
| Q |
336 |
accatatgatcattggagcaaggaagagaatagaattgggtttgtggtaatgtactcactcacattcttctttgctaattttggtccaaatgctacgaca |
435 |
Q |
| |
|
||| ||||||||||||| ||| |||| || |||||||||||||| |||||||||||| | || ||||| ||||| ||||| |||||||||||||| ||| |
|
|
| T |
33110057 |
accttatgatcattggactaagaaagaaaacagaattgggtttgttgtaatgtactcattaactttcttttttgccaatttcggtccaaatgctaccaca |
33110156 |
T |
|
| Q |
436 |
tttgttgtaccggcagagatttttccggctaggttaaggtctacctgtcatggaatatcagctgctgcaggaaagg |
511 |
Q |
| |
|
|||||||| || || |||||||| ||||| ||| | || ||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
33110157 |
tttgttgttccagccgagattttcccggcaaggcttagatctacctgtcacggaatctcagctgctgcaggaaagg |
33110232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 16174783 - 16174900
Alignment:
| Q |
20 |
ttcaagttcaacttgcaataccttagacatatccgcggcagcttgtttcgcgttcttagcaacaagagccgtgtaacgagctgtttctggcattttcatt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16174783 |
ttcaagttcaacttgcaataccttagacatatccgcagcagcttgtttcgcgttcttagcaacaagagccgtgtaacgagctgtttctggcattttcatt |
16174882 |
T |
|
| Q |
120 |
cgccagtagtacgtcaat |
137 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
16174883 |
cgccagtagtacgtcaat |
16174900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 16184579 - 16184462
Alignment:
| Q |
20 |
ttcaagttcaacttgcaataccttagacatatccgcggcagcttgtttcgcgttcttagcaacaagagccgtgtaacgagctgtttctggcattttcatt |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
16184579 |
ttcaagttcaacttgcaataccttagacatatccgcggcagcttgtttcgcgttcttagcaacaagagcggtgtaacgggctgtttctggcattttcatt |
16184480 |
T |
|
| Q |
120 |
cgccagtagtacgtcaat |
137 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
16184479 |
cgccagtagtacgtcaat |
16184462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 16223969 - 16223852
Alignment:
| Q |
20 |
ttcaagttcaacttgcaataccttagacatatccgcggcagcttgtttcgcgttcttagcaacaagagccgtgtaacgagctgtttctggcattttcatt |
119 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16223969 |
ttcaagttcaacttgcaacaccttagacatatccgcagcagcttgtttcgcgttcttagcaacaagagccgtgtaacgagctgtttctggcattttcatt |
16223870 |
T |
|
| Q |
120 |
cgccagtagtacgtcaat |
137 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
16223869 |
cgccagtagtacgtcaat |
16223852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 178 - 509
Target Start/End: Original strand, 33115940 - 33116271
Alignment:
| Q |
178 |
gaggtttacaagattgcaagagcacaaacacttattgcgttgtgcagtactgttccgggttactggttcacagtagcgtttatcgatcacatgggtcgtt |
277 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| || || | |||||||||||||| ||||||||||||||||| || | || ||| || || | | |
|
|
| T |
33115940 |
gaggtttacaagattgctagagcacagacactcatagcactttgcagtactgttcctggttactggttcacagtggcactcattgatagaattggaagat |
33116039 |
T |
|
| Q |
278 |
tcgctattcaaatgatgggattcttcttcatgactgttttcatgtttgctcttgcaataccatatgatcattggagcaaggaagagaatagaattgggtt |
377 |
Q |
| |
|
| | || ||| |||||||||| ||||||||||| ||||||||||||| | || || |||||| | ||||||| || | ||| || |||||| || |
|
|
| T |
33116040 |
ttacaatccaattgatgggatttttcttcatgaccgttttcatgtttggattggccattccatatcaccattggaccatgaaaggaaaccaaattggttt |
33116139 |
T |
|
| Q |
378 |
tgtggtaatgtactcactcacattcttctttgctaattttggtccaaatgctacgacatttgttgtaccggcagagatttttccggctaggttaaggtct |
477 |
Q |
| |
|
||| || ||||| ||| | |||||||||||||||||||||||||||||||| ||||| ||||| || |||||||||||||| ||||| ||| ||||||| |
|
|
| T |
33116140 |
tgttgtcatgtattcattgacattcttctttgctaattttggtccaaatgcaacgacgtttgtggttccggcagagattttcccggcaaggctaaggtca |
33116239 |
T |
|
| Q |
478 |
acctgtcatggaatatcagctgctgcaggaaa |
509 |
Q |
| |
|
|| |||||||| ||||| |||||||| ||||| |
|
|
| T |
33116240 |
acatgtcatggtatatccgctgctgctggaaa |
33116271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 163 - 494
Target Start/End: Complemental strand, 30620106 - 30619775
Alignment:
| Q |
163 |
atgaatgcaattcatgaggtttacaagattgcaagagcacaaacacttattgcgttgtgcagtactgttccgggttactggttcacagtagcgtttatcg |
262 |
Q |
| |
|
||||||||| || | |||||||| || ||||| || || |||||||||||||| || |||||||| ||||| ||||||||||||||||| || || || | |
|
|
| T |
30620106 |
atgaatgcacttgaagaggtttataaaattgcgagggcgcaaacacttattgcattatgcagtacagttcctggttactggttcacagttgcattcattg |
30620007 |
T |
|
| Q |
263 |
atcacatgggtcgtttcgctattcaaatgatgggattcttcttcatgactgttttcatgtttgctcttgcaataccatatgatcattggagcaaggaaga |
362 |
Q |
| |
|
|| || || | ||| ||||||| | |||||||| ||||| ||||| ||||| |||||||| ||||| || || |||||||| |||| | |||| |
|
|
| T |
30620006 |
atagaattggaaggttcactattcagttaatgggatttttctttatgacagtttttatgtttgcacttgctattccttatgatcactggacacataaaga |
30619907 |
T |
|
| Q |
363 |
gaatagaattgggtttgtggtaatgtactcactcacattcttctttgctaattttggtccaaatgctacgacatttgttgtaccggcagagatttttccg |
462 |
Q |
| |
|
||| ||||| || ||||| ||| | || || | || |||||||| || ||||| || || ||||| || || || ||||| || || |||||||| ||| |
|
|
| T |
30619906 |
gaacagaatcggatttgttgtactttattccttaactttcttcttcgcgaatttcggacctaatgcaaccactttcgttgtgcctgccgagattttcccg |
30619807 |
T |
|
| Q |
463 |
gctaggttaaggtctacctgtcatggaatatc |
494 |
Q |
| |
|
|||||||| || || || ||||| |||||||| |
|
|
| T |
30619806 |
gctaggtttagatcaacttgtcacggaatatc |
30619775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 33109679 - 33109572
Alignment:
| Q |
20 |
ttcaagttcaacttgcaataccttagacatatccgcggcagcttgtttcgcgttcttagcaacaagagccgtgtaacgagctgtttctggcattttcatt |
119 |
Q |
| |
|
||||| ||||||||| || |||||||||||||| | ||||||||||| | |||||||||||||| ||||||||||||||||| || ||||| ||||| |
|
|
| T |
33109679 |
ttcaatttcaacttgtaacaccttagacatatcagaagcagcttgtttaccattcttagcaacaagtgccgtgtaacgagctgtctcaggcatcttcata |
33109580 |
T |
|
| Q |
120 |
cgccagta |
127 |
Q |
| |
|
|||||||| |
|
|
| T |
33109579 |
cgccagta |
33109572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 491
Target Start/End: Complemental strand, 30615313 - 30615024
Alignment:
| Q |
202 |
caaacacttattgcgttgtgcagtactgttccgggttactggttcacagtagcgtttatcgatcacatgggtcgtttcgctattcaaatgatgggattct |
301 |
Q |
| |
|
|||||||||||||| || || ||||| ||||| ||||||||||||||||| || | || ||| ||||| | ||| ||||||| | |||||||||| |
|
|
| T |
30615313 |
caaacacttattgctttatgtagtacagttcctggttactggttcacagtggcactcattgatagaatgggaaggttcactattcagttaatgggattct |
30615214 |
T |
|
| Q |
302 |
tcttcatgactgttttcatgtttgctcttgcaataccatatgatcattggagcaagga-agagaatagaattgggtttgtggtaatgtactcactcacat |
400 |
Q |
| |
|
|||| ||||| ||||| |||||||| |||| || || | |||||| |||| ||| | |||||| | ||||||||||| || | || | | || | |
|
|
| T |
30615213 |
tctttatgacagtttttatgtttgcaattgctattccttttgatcactgga-caataacagagaacaaaattgggtttgctgtgctttatgccttaacct |
30615115 |
T |
|
| Q |
401 |
tcttctttgctaattttggtccaaatgctacgacatttgttgtaccggcagagatttttccggctaggttaaggtctacctgtcatggaat |
491 |
Q |
| |
|
||||||| || ||||| || || ||| |||| ||||||||||| || || |||||||| ||||||||||| || || || ||||||||||| |
|
|
| T |
30615114 |
tcttcttcgcaaatttcgggcctaatactaccacatttgttgtgcctgccgagattttcccggctaggtttagatcaacttgtcatggaat |
30615024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 229 - 494
Target Start/End: Complemental strand, 37315095 - 37314830
Alignment:
| Q |
229 |
gttccgggttactggttcacagtagcgtttatcgatcacatgggtcgtttcgctattcaaatgatgggattcttcttcatgactgttttcatgtttgctc |
328 |
Q |
| |
|
||||| || ||||||||||| || || |||||||| || |||||||| || |||||| | |||||||||||||| |||||||| ||||||||||| | |
|
|
| T |
37315095 |
gttcccggatactggttcacggtggcttttatcgacgttattggtcgttttgcaattcaactaatgggattcttctttatgactgtgttcatgtttgcgc |
37314996 |
T |
|
| Q |
329 |
ttgcaataccatatgatcattggagcaaggaagagaatagaattgggtttgtggtaatgtactcactcacattcttctttgctaattttggtccaaatgc |
428 |
Q |
| |
|
| || || || ||||||||||||| ||| ||| || |||||||| ||| | || |||||| || | || || |||||||| ||||||||||||||| | |
|
|
| T |
37314995 |
tcgctattccgtatgatcattggactaagagagaaaacagaattggatttcttgttatgtacgcaatgacttttttctttgcaaattttggtccaaattc |
37314896 |
T |
|
| Q |
429 |
tacgacatttgttgtaccggcagagatttttccggctaggttaaggtctacctgtcatggaatatc |
494 |
Q |
| |
|
|| || ||||||||||| || |||||||| ||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
37314895 |
aaccacttttgttgtacctgccgagattttcccggctaggttgaggtctacatgtcatggtatatc |
37314830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 54; Significance: 9e-22; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 290 - 495
Target Start/End: Original strand, 38894093 - 38894298
Alignment:
| Q |
290 |
tgatgggattcttcttcatgactgttttcatgtttgctcttgcaataccatatgatcattggagcaaggaagagaatagaattgggtttgtggtaatgta |
389 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||| |||| | | || | |||| || || |||||| |||| |
|
|
| T |
38894093 |
tgatgggattcttctttatgactgtcttcatgtttgctcttgccattccatatgatcactggactcataaggatcaccgaatcggattcgtggtattgta |
38894192 |
T |
|
| Q |
390 |
ctcactcacattcttctttgctaattttggtccaaatgctacgacatttgttgtaccggcagagatttttccggctaggttaaggtctacctgtcatgga |
489 |
Q |
| |
|
||| | || ||||||||||| ||||| || || |||||||| || |||||||| || ||||| |||||||| ||||| || | |||||||| |||||| |
|
|
| T |
38894193 |
ttcattgaccttcttctttgcaaatttcgggcctaatgctaccacctttgttgtgccagcagaaatttttcctgctagattccgttctacctgccatgga |
38894292 |
T |
|
| Q |
490 |
atatca |
495 |
Q |
| |
|
|||||| |
|
|
| T |
38894293 |
atatca |
38894298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 290 - 467
Target Start/End: Original strand, 38884907 - 38885084
Alignment:
| Q |
290 |
tgatgggattcttcttcatgactgttttcatgtttgctcttgcaataccatatgatcattggagcaaggaagagaatagaattgggtttgtggtaatgta |
389 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||||| || || ||||| || |||| | | || || |||| || |||||||| || || |
|
|
| T |
38884907 |
tgatgggattcttctttatgactgccttcatgtttgctcttgccattccttatgaacactggactcataaggaaaaccgaataggatttgtggtgatata |
38885006 |
T |
|
| Q |
390 |
ctcactcacattcttctttgctaattttggtccaaatgctacgacatttgttgtaccggcagagatttttccggctag |
467 |
Q |
| |
|
|| | || ||||||||||| |||||||| || |||||||| ||||||||||| || |||||||||||||| ||||| |
|
|
| T |
38885007 |
ttccttgaccttcttctttgcaaattttgggcctaatgctacaacatttgttgtgccagcagagatttttccagctag |
38885084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 38893769 - 38893661
Alignment:
| Q |
27 |
tcaacttgcaataccttagacatatccgcggcagcttgtttcgcgttcttagcaacaagagccgtgtaacgagctgtttctggcattttcattcgccagt |
126 |
Q |
| |
|
||||| ||||| |||||||||||||| || ||||| || || | || ||||||||| ||||| ||||||||||| ||||||||||| ||||| ||||| | |
|
|
| T |
38893769 |
tcaacctgcaaaaccttagacatatctgctgcagcctgcttggtgtccttagcaactagagcagtgtaacgagcagtttctggcatcttcatccgccaat |
38893670 |
T |
|
| Q |
127 |
agtacgtca |
135 |
Q |
| |
|
|||| |||| |
|
|
| T |
38893669 |
agtaagtca |
38893661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 245
Target Start/End: Original strand, 38893937 - 38894048
Alignment:
| Q |
134 |
caattggatggatacctccggcaaaagaaatgaatgcaattcatgaggtttacaagattgcaagagcacaaacacttattgcgttgtgcagtactgttcc |
233 |
Q |
| |
|
||||||| |||||||| || ||| || ||||||||| || | ||||||||||| || |||||||| |||||||||||||| | |||||||| ||||| |
|
|
| T |
38893937 |
caattggttggataccacctgcacaaactatgaatgcacttgaggaggtttacaaaatcgcaagagctcaaacacttattgctctatgcagtacagttcc |
38894036 |
T |
|
| Q |
234 |
gggttactggtt |
245 |
Q |
| |
|
|| |||||||| |
|
|
| T |
38894037 |
aggctactggtt |
38894048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 38884577 - 38884469
Alignment:
| Q |
27 |
tcaacttgcaataccttagacatatccgcggcagcttgtttcgcgttcttagcaacaagagccgtgtaacgagctgtttctggcattttcattcgccagt |
126 |
Q |
| |
|
||||| ||||| ||||||||||||||||| ||||| || | |||||||||||| | ||| || |||||||| ||||||||||| ||| | ||| ||| |
|
|
| T |
38884577 |
tcaacctgcaaaaccttagacatatccgctgcagcctgcgctgtgttcttagcaactaaagctgtataacgagcagtttctggcatcttcgtccgcgagt |
38884478 |
T |
|
| Q |
127 |
agtacgtca |
135 |
Q |
| |
|
|||| |||| |
|
|
| T |
38884477 |
agtaagtca |
38884469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 38884780 - 38884862
Alignment:
| Q |
163 |
atgaatgcaattcatgaggtttacaagattgcaagagcacaaacacttattgcgttgtgcagtactgttccgggttactggtt |
245 |
Q |
| |
|
||||||||| || | ||||||||||| ||||| |||| |||||||||||||| | |||||||| ||||| ||||| ||||| |
|
|
| T |
38884780 |
atgaatgcacttgaggaggtttacaaaattgctcgagctcaaacacttattgctctatgcagtacagttccaggttattggtt |
38884862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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