View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20627_low_6 (Length: 440)

Name: NF20627_low_6
Description: NF20627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20627_low_6
NF20627_low_6
[»] chr7 (43 HSPs)
chr7 (1-430)||(1350111-1350542)
chr7 (1-430)||(1373409-1373835)
chr7 (216-430)||(1358066-1358280)
chr7 (1-117)||(1384080-1384196)
chr7 (1-117)||(1390185-1390301)
chr7 (1-117)||(1358332-1358448)
chr7 (1-111)||(1394437-1394547)
chr7 (361-430)||(1393722-1393791)
chr7 (360-430)||(1383685-1383755)
chr7 (360-430)||(1389790-1389860)
chr7 (162-271)||(27378856-27378965)
chr7 (199-271)||(17989051-17989123)
chr7 (205-271)||(36370645-36370711)
chr7 (204-305)||(44151476-44151575)
chr7 (199-271)||(12110330-12110402)
chr7 (199-271)||(30456478-30456550)
chr7 (211-257)||(1413120-1413166)
chr7 (160-271)||(47941250-47941365)
chr7 (204-253)||(5369737-5369786)
chr7 (161-265)||(44917570-44917675)
chr7 (222-271)||(46104595-46104644)
chr7 (199-271)||(7623108-7623180)
chr7 (216-264)||(25296971-25297019)
chr7 (205-265)||(28340878-28340938)
chr7 (199-271)||(29363488-29363560)
chr7 (199-271)||(31338478-31338550)
chr7 (199-271)||(38010684-38010756)
chr7 (199-271)||(40689014-40689086)
chr7 (199-263)||(44910574-44910638)
chr7 (216-271)||(4966143-4966198)
chr7 (204-271)||(10190770-10190837)
chr7 (176-246)||(47004033-47004104)
chr7 (160-265)||(3610774-3610880)
chr7 (204-246)||(9527143-9527185)
chr7 (199-265)||(23918927-23918993)
chr7 (197-271)||(47177604-47177678)
chr7 (204-265)||(3559010-3559071)
chr7 (230-271)||(12792591-12792632)
chr7 (205-266)||(39169449-39169509)
chr7 (160-193)||(47559715-47559748)
chr7 (160-223)||(7244632-7244696)
chr7 (216-268)||(18350738-18350790)
chr7 (167-265)||(36484069-36484169)
[»] chr5 (37 HSPs)
chr5 (162-304)||(17258880-17259021)
chr5 (216-304)||(32408589-32408675)
chr5 (216-268)||(2569726-2569778)
chr5 (199-263)||(14295476-14295540)
chr5 (160-246)||(32059642-32059728)
chr5 (166-258)||(26209454-26209546)
chr5 (216-271)||(13604877-13604932)
chr5 (160-271)||(33234292-33234403)
chr5 (199-266)||(38047888-38047955)
chr5 (229-271)||(3237093-3237135)
chr5 (161-246)||(10907310-10907396)
chr5 (204-269)||(18543226-18543292)
chr5 (216-313)||(41957439-41957534)
chr5 (162-246)||(18857453-18857538)
chr5 (216-304)||(21768194-21768280)
chr5 (199-271)||(9202776-9202848)
chr5 (205-312)||(10272420-10272525)
chr5 (204-236)||(13193774-13193806)
chr5 (216-264)||(16945018-16945066)
chr5 (228-272)||(29201532-29201576)
chr5 (220-315)||(32172644-32172737)
chr5 (199-266)||(12975317-12975384)
chr5 (224-271)||(30217077-30217124)
chr5 (160-234)||(35135727-35135802)
chr5 (204-266)||(8985636-8985698)
chr5 (199-304)||(28586763-28586866)
chr5 (217-271)||(29054896-29054950)
chr5 (229-271)||(32197720-32197762)
chr5 (235-304)||(36639528-36639595)
chr5 (217-254)||(18286779-18286816)
chr5 (216-257)||(36181219-36181260)
chr5 (229-270)||(41929729-41929770)
chr5 (215-271)||(2568644-2568700)
chr5 (199-271)||(3970708-3970780)
chr5 (199-271)||(12425541-12425613)
chr5 (199-263)||(36539716-36539780)
chr5 (199-271)||(41016149-41016221)
[»] chr6 (37 HSPs)
chr6 (1-111)||(7009741-7009851)
chr6 (161-271)||(4006645-4006756)
chr6 (1-111)||(7006647-7006757)
chr6 (205-311)||(3528779-3528883)
chr6 (216-314)||(4246397-4246493)
chr6 (199-265)||(2117373-2117439)
chr6 (199-271)||(1497951-1498023)
chr6 (367-423)||(7006346-7006402)
chr6 (367-423)||(7009427-7009483)
chr6 (199-271)||(31671102-31671174)
chr6 (205-315)||(10616527-10616635)
chr6 (220-271)||(33911310-33911361)
chr6 (238-272)||(29837111-29837145)
chr6 (199-317)||(281832-281948)
chr6 (216-271)||(1275136-1275191)
chr6 (199-246)||(2027459-2027506)
chr6 (199-262)||(3155146-3155209)
chr6 (204-271)||(13907822-13907889)
chr6 (204-271)||(18264304-18264371)
chr6 (163-315)||(5328907-5329057)
chr6 (219-265)||(7149507-7149553)
chr6 (216-258)||(10860958-10861000)
chr6 (199-304)||(27894017-27894119)
chr6 (199-311)||(725645-725755)
chr6 (201-270)||(2167989-2168058)
chr6 (201-270)||(2179622-2179691)
chr6 (222-271)||(2735062-2735111)
chr6 (204-245)||(5550107-5550148)
chr6 (216-265)||(24838777-24838826)
chr6 (166-246)||(29274282-29274363)
chr6 (210-271)||(31324437-31324498)
chr6 (171-271)||(33887771-33887872)
chr6 (222-266)||(1401102-1401146)
chr6 (160-271)||(8420225-8420337)
chr6 (199-271)||(10400239-10400311)
chr6 (220-268)||(13907409-13907457)
chr6 (199-271)||(33787773-33787845)
[»] chr3 (39 HSPs)
chr3 (175-315)||(24887270-24887408)
chr3 (161-271)||(36101499-36101610)
chr3 (210-303)||(20502066-20502157)
chr3 (160-304)||(27290898-27291039)
chr3 (199-271)||(25453887-25453959)
chr3 (216-304)||(33405163-33405250)
chr3 (175-312)||(3044248-3044384)
chr3 (160-271)||(24158531-24158642)
chr3 (162-241)||(20192664-20192744)
chr3 (216-311)||(52618990-52619083)
chr3 (161-271)||(36139809-36139920)
chr3 (160-265)||(27792802-27792908)
chr3 (199-266)||(33965522-33965591)
chr3 (199-244)||(2201098-2201143)
chr3 (216-264)||(20874339-20874387)
chr3 (160-271)||(22232756-22232868)
chr3 (205-265)||(43875624-43875684)
chr3 (216-264)||(47904098-47904146)
chr3 (221-315)||(43115048-43115140)
chr3 (216-313)||(1217788-1217883)
chr3 (161-246)||(33674710-33674792)
chr3 (199-253)||(38462251-38462305)
chr3 (163-315)||(54775061-54775211)
chr3 (163-247)||(1395604-1395689)
chr3 (199-252)||(19679375-19679428)
chr3 (222-271)||(22203423-22203472)
chr3 (210-271)||(22343589-22343650)
chr3 (199-264)||(28306128-28306193)
chr3 (199-271)||(1816553-1816625)
chr3 (231-271)||(2071058-2071098)
chr3 (199-271)||(2197806-2197878)
chr3 (204-252)||(19679807-19679855)
chr3 (199-271)||(21367637-21367709)
chr3 (207-255)||(21872315-21872363)
chr3 (199-271)||(23315596-23315668)
chr3 (199-271)||(24785175-24785247)
chr3 (199-271)||(32064410-32064481)
chr3 (198-254)||(42753575-42753631)
chr3 (216-272)||(52440689-52440745)
[»] chr1 (52 HSPs)
chr1 (204-315)||(6231802-6231912)
chr1 (161-268)||(33527178-33527286)
chr1 (160-264)||(17269180-17269285)
chr1 (199-271)||(7218102-7218174)
chr1 (175-271)||(44422646-44422741)
chr1 (169-262)||(48830113-48830207)
chr1 (206-271)||(4078177-4078242)
chr1 (199-260)||(37272625-37272686)
chr1 (160-271)||(10854663-10854775)
chr1 (279-315)||(43771885-43771921)
chr1 (199-305)||(30257653-30257757)
chr1 (208-263)||(47960660-47960715)
chr1 (208-317)||(4622072-4622179)
chr1 (216-270)||(25005826-25005880)
chr1 (199-304)||(27887115-27887218)
chr1 (180-317)||(29723440-29723575)
chr1 (207-260)||(4363671-4363724)
chr1 (222-271)||(4700094-4700143)
chr1 (222-271)||(7137026-7137075)
chr1 (222-271)||(7472304-7472353)
chr1 (175-271)||(10199436-10199533)
chr1 (222-271)||(34290229-34290278)
chr1 (199-251)||(10581125-10581177)
chr1 (216-315)||(11695848-11695945)
chr1 (163-312)||(30259475-30259624)
chr1 (199-271)||(34179900-34179972)
chr1 (175-246)||(49517015-49517087)
chr1 (216-314)||(4549217-4549313)
chr1 (160-270)||(7273968-7274079)
chr1 (204-271)||(24913438-24913505)
chr1 (217-311)||(31517730-31517822)
chr1 (216-271)||(35017563-35017618)
chr1 (209-271)||(3924604-3924666)
chr1 (204-246)||(15361688-15361730)
chr1 (199-265)||(25006068-25006134)
chr1 (204-265)||(4549576-4549637)
chr1 (204-304)||(6292468-6292566)
chr1 (206-271)||(16322826-16322891)
chr1 (218-271)||(25479570-25479623)
chr1 (176-244)||(29007771-29007840)
chr1 (199-272)||(44032026-44032099)
chr1 (160-272)||(4019620-4019731)
chr1 (219-271)||(5592713-5592765)
chr1 (204-264)||(6074449-6074509)
chr1 (204-252)||(8130411-8130459)
chr1 (199-255)||(9656620-9656676)
chr1 (163-234)||(15360827-15360899)
chr1 (199-310)||(36151496-36151605)
chr1 (161-193)||(37818395-37818427)
chr1 (219-271)||(39347995-39348047)
chr1 (231-271)||(43332486-43332526)
chr1 (160-271)||(52286608-52286720)
[»] scaffold0024 (1 HSPs)
scaffold0024 (162-252)||(27508-27599)
[»] chr2 (51 HSPs)
chr2 (160-266)||(28803539-28803646)
chr2 (199-304)||(33256710-33256813)
chr2 (161-266)||(10143103-10143209)
chr2 (204-313)||(43141846-43141953)
chr2 (160-271)||(3235412-3235522)
chr2 (160-255)||(17952745-17952841)
chr2 (204-315)||(43205284-43205393)
chr2 (216-271)||(9395117-9395172)
chr2 (216-271)||(15377752-15377807)
chr2 (216-271)||(39983329-39983384)
chr2 (161-271)||(41817099-41817210)
chr2 (175-310)||(1939323-1939457)
chr2 (229-271)||(4026817-4026859)
chr2 (205-271)||(13736321-13736387)
chr2 (229-271)||(44644278-44644320)
chr2 (208-265)||(6561340-6561397)
chr2 (160-311)||(9478229-9478379)
chr2 (226-271)||(10884549-10884594)
chr2 (216-265)||(15780064-15780113)
chr2 (183-271)||(36415701-36415790)
chr2 (167-246)||(39621890-39621968)
chr2 (160-243)||(11344340-11344424)
chr2 (160-267)||(13630313-13630421)
chr2 (205-257)||(13866865-13866917)
chr2 (199-271)||(22681213-22681285)
chr2 (205-315)||(1742018-1742126)
chr2 (199-246)||(3102663-3102710)
chr2 (204-271)||(16353837-16353903)
chr2 (216-271)||(18066115-18066170)
chr2 (216-271)||(18179268-18179323)
chr2 (216-259)||(25800816-25800859)
chr2 (199-309)||(33942120-33942228)
chr2 (204-271)||(35486391-35486458)
chr2 (216-271)||(43985031-43985086)
chr2 (229-271)||(3049974-3050016)
chr2 (199-269)||(5043590-5043660)
chr2 (205-271)||(25790102-25790168)
chr2 (199-252)||(11513868-11513921)
chr2 (222-271)||(42419990-42420039)
chr2 (205-266)||(42817409-42817470)
chr2 (199-271)||(8017404-8017476)
chr2 (199-271)||(9556209-9556281)
chr2 (279-315)||(11344756-11344792)
chr2 (199-271)||(13869123-13869195)
chr2 (203-271)||(26626847-26626915)
chr2 (211-271)||(30552672-30552732)
chr2 (161-264)||(34054936-34055040)
chr2 (199-271)||(35485887-35485959)
chr2 (199-271)||(36863653-36863725)
chr2 (205-261)||(37276722-37276778)
chr2 (199-267)||(37292379-37292447)
[»] chr4 (34 HSPs)
chr4 (204-271)||(21157743-21157810)
chr4 (163-304)||(23819023-23819162)
chr4 (175-271)||(49219084-49219181)
chr4 (165-311)||(2996508-2996653)
chr4 (160-272)||(44319880-44319992)
chr4 (208-246)||(17883546-17883584)
chr4 (229-271)||(47800623-47800665)
chr4 (229-271)||(56480348-56480390)
chr4 (169-265)||(35958594-35958691)
chr4 (228-272)||(12650311-12650355)
chr4 (160-303)||(30207569-30207710)
chr4 (211-271)||(36722697-36722757)
chr4 (228-271)||(1706621-1706664)
chr4 (210-245)||(10365753-10365788)
chr4 (216-271)||(29778782-29778837)
chr4 (222-269)||(35507355-35507402)
chr4 (222-269)||(35507487-35507534)
chr4 (208-271)||(53315305-53315368)
chr4 (199-266)||(54325070-54325137)
chr4 (205-271)||(7694038-7694104)
chr4 (221-271)||(25309233-25309283)
chr4 (161-242)||(42321936-42322018)
chr4 (208-266)||(42866047-42866105)
chr4 (232-292)||(3155606-3155664)
chr4 (160-265)||(3891507-3891611)
chr4 (160-193)||(4663803-4663836)
chr4 (199-315)||(24929463-24929577)
chr4 (238-271)||(40008546-40008579)
chr4 (205-246)||(41097296-41097337)
chr4 (223-271)||(1137706-1137754)
chr4 (199-263)||(3175921-3175985)
chr4 (229-304)||(11264301-11264374)
chr4 (199-271)||(16200009-16200081)
chr4 (235-271)||(21043263-21043299)
[»] chr8 (39 HSPs)
chr8 (175-265)||(6509337-6509426)
chr8 (204-271)||(10075579-10075646)
chr8 (204-271)||(39389204-39389271)
chr8 (161-266)||(4763849-4763955)
chr8 (205-255)||(30013194-30013244)
chr8 (161-271)||(34522082-34522195)
chr8 (163-315)||(41620277-41620428)
chr8 (204-304)||(11795067-11795165)
chr8 (199-271)||(1470884-1470956)
chr8 (205-304)||(12361168-12361265)
chr8 (230-270)||(25097387-25097427)
chr8 (199-271)||(29973051-29973123)
chr8 (199-271)||(42215334-42215406)
chr8 (204-312)||(43704365-43704473)
chr8 (216-271)||(5227522-5227577)
chr8 (204-271)||(9836882-9836949)
chr8 (228-271)||(27028830-27028873)
chr8 (204-271)||(31862468-31862535)
chr8 (225-315)||(31875581-31875669)
chr8 (222-257)||(38537584-38537619)
chr8 (216-271)||(41309772-41309827)
chr8 (162-271)||(4558730-4558840)
chr8 (205-251)||(28769387-28769433)
chr8 (218-315)||(39551195-39551290)
chr8 (210-264)||(42764248-42764302)
chr8 (206-271)||(1433525-1433590)
chr8 (160-264)||(4390143-4390248)
chr8 (218-271)||(9562291-9562344)
chr8 (199-311)||(11183515-11183625)
chr8 (228-269)||(40014919-40014960)
chr8 (160-193)||(42476035-42476068)
chr8 (239-271)||(1470029-1470061)
chr8 (199-271)||(8062494-8062566)
chr8 (199-271)||(10383855-10383927)
chr8 (160-252)||(26717187-26717278)
chr8 (175-246)||(26820144-26820216)
chr8 (217-261)||(30043784-30043828)
chr8 (205-257)||(32143087-32143139)
chr8 (199-271)||(33209248-33209320)
[»] scaffold0352 (1 HSPs)
scaffold0352 (220-271)||(12060-12111)
[»] scaffold0091 (1 HSPs)
scaffold0091 (216-271)||(6939-6994)
[»] scaffold0020 (1 HSPs)
scaffold0020 (219-317)||(159957-160053)
[»] scaffold0092 (1 HSPs)
scaffold0092 (228-274)||(40230-40276)
[»] scaffold0254 (1 HSPs)
scaffold0254 (201-270)||(2641-2710)
[»] scaffold0110 (1 HSPs)
scaffold0110 (199-251)||(4271-4323)


Alignment Details
Target: chr7 (Bit Score: 379; Significance: 0; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 1 - 430
Target Start/End: Complemental strand, 1350542 - 1350111
Alignment:
Q  1 ccatcccttccttataaggtattcaacttctttcgccaattgttctctggtcaatggtggaaggtatgaaagagtctcaaacttcttcttgccaatagga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1350542 ccatcccttccttataaggtattcaacttctttcgccaattgttctctggtcaatggtggaagatatgaaagagtctcaaacttcttcttgccaatagga 1350443  T
Q  101 ggccacacctaaaattgnnnnnnn-gggtcaacaaacttgtgtacttttgccaacaaatctataagtgcttatgaataagttatttctataaca-ttgac 198  Q
    |||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1350442 ggccacacctaaaattgaaaaaaaagggtcaacaaacttgtgtacttttgccaacaaatctataagtgcttatgaataagttatttctataacaattgac 1350343  T
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 298  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  1350342 aaaagaaagtcaaacttttttcacataatctataagctgttttcataaactatcctgaagagcttatgaaaatataagaagaaaacagtttacgggcatg 1350243  T
Q  299 tcataaattgtttccattatgctaataatatactcaaataaactaaaatagtaggcatgttttttctcacctgcatgcagtttactcttccgccattgct 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1350242 tcataaattgtttccattatgctaataatatactcaaataaactaaaatagtaggcatgttttttctcacctgcatgcagtttactcttccgccattgct 1350143  T
Q  399 tgtaatggaggtaatgtctttgttgacctttg 430  Q
    ||||||||||||||||||||||||||||||||    
T  1350142 tgtaatggaggtaatgtctttgttgacctttg 1350111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 430
Target Start/End: Complemental strand, 1373835 - 1373409
Alignment:
Q  1 ccatcccttccttataaggtattcaacttctttcgccaattgttctctggtcaatggtggaaggtatgaaagagtctcaaacttcttcttgccaatagga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1373835 ccatcccttccttataaggtattcaacttctttcgccaattgttctctggtcaatggtggaagatatgaaagagtctcaaacttcttcttgccaatagga 1373736  T
Q  101 ggccacacctaaaattgnnnnnnngggtcaacaaacttgtgtacttttgccaacaaatctataagtgcttatgaataagttatttctataacatt-gaca 199  Q
    |||||||||||||||||        ||| ||||||||||||| | |||  |||| ||||| ||| |    ||| | ||||||||| ||| |||   || |    
T  1373735 ggccacacctaaaattgcacaaaatggttaacaaacttgtgtgcatttttcaacgaatctctaaat----atgtaaaagttatttttatgacaaaagata 1373640  T
Q  200 aaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgt 299  Q
    ||  |||||||||||||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||| ||||| |||||||||||||||||||||    
T  1373639 aattaaagtcaaacttttttcatatagtctataacctgttttcataaactatcttgaagggcttatgaaaatataagatgaaaacagtttacggacatgt 1373540  T
Q  300 cataaattgtttccattatgctaataatatactcaaataaactaaaatagtaggcatgttttttctcacctgcatgcagtttactcttccgccattgctt 399  Q
    ||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1373539 cataaattgtttcgattatgctaataacaaactcaaataaactaaaatagtaggcatgttttttctcacctgcatgcagtttactcttccgccattgctt 1373440  T
Q  400 gtaatggaggtaatgtctttgttgacctttg 430  Q
    |||||||||||||||||||||||||||||||    
T  1373439 gtaatggaggtaatgtctttgttgacctttg 1373409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 216 - 430
Target Start/End: Complemental strand, 1358280 - 1358066
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcct--------gaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaatt 307  Q
    |||||||||||||||||||||||||||||||||||||||        ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||    
T  1358280 ttttcatataatctataagctgttttcataaactatcctactatcctgaagagcttatgaaaatataagatgaaaacagtttacagacatgtcataaatt 1358181  T
Q  308 gtttccattatgctaataatatactcaaataaactaaaatagtaggc--atgttttttctcacctgcatgcagtttactcttccgccattgcttgtaatg 405  Q
    |||||||||||||||||          ||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||| ||||||||||||||     
T  1358180 gtttccattatgctaat----------aataaactaaaatagtaggcctattatttttctcacctgcatgcagtttactcttccaccattgcttgtaata 1358091  T
Q  406 gaggtaatgtctttgttgacctttg 430  Q
    ||||||||||| |||||||||||||    
T  1358090 gaggtaatgtccttgttgacctttg 1358066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1384196 - 1384080
Alignment:
Q  1 ccatcccttccttataaggtattcaacttctttcgccaattgttctctggtcaatggtggaaggtatgaaagagtctcaaacttcttcttgccaatagga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1384196 ccatcccttccttataaggtattcaacttctttcgccaattgttctctggtcaatggtggaaggtatgaaagagtctcaaacttcttcttgccaatagga 1384097  T
Q  101 ggccacacctaaaattg 117  Q
    |||||||||||||||||    
T  1384096 ggccacacctaaaattg 1384080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1390301 - 1390185
Alignment:
Q  1 ccatcccttccttataaggtattcaacttctttcgccaattgttctctggtcaatggtggaaggtatgaaagagtctcaaacttcttcttgccaatagga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1390301 ccatcccttccttataaggtattcaacttctttcgccaattgttctctggtcaatggtggaaggtatgaaagagtctcaaacttcttcttgccaatagga 1390202  T
Q  101 ggccacacctaaaattg 117  Q
    |||||||||||||||||    
T  1390201 ggccacacctaaaattg 1390185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1358448 - 1358332
Alignment:
Q  1 ccatcccttccttataaggtattcaacttctttcgccaattgttctctggtcaatggtggaaggtatgaaagagtctcaaacttcttcttgccaatagga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1358448 ccatcccttccttataaggtattcaacttctttggccaattgttctctggtcaatggtggaaggtatgaaagtgtctcaaacttcttcttgccaatagga 1358349  T
Q  101 ggccacacctaaaattg 117  Q
    |||||||||||||||||    
T  1358348 ggccacacctaaaattg 1358332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 1394547 - 1394437
Alignment:
Q  1 ccatcccttccttataaggtattcaacttctttcgccaattgttctctggtcaatggtggaaggtatgaaagagtctcaaacttcttcttgccaatagga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1394547 ccatcccttccttataaggtattcaacttctttcgccaattgttctctggtcaatggtggaagatatgaaagagtctcaaacttcttcttgccaatagga 1394448  T
Q  101 ggccacaccta 111  Q
    |||||||||||    
T  1394447 ggccacaccta 1394437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 361 - 430
Target Start/End: Complemental strand, 1393791 - 1393722
Alignment:
Q  361 tttctcacctgcatgcagtttactcttccgccattgcttgtaatggaggtaatgtctttgttgacctttg 430  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1393791 tttctcacctgcatgcagtttactcttccaccattgcttgtaatggaggtaatgtctttgttgacctttg 1393722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 1383755 - 1383685
Alignment:
Q  360 ttttctcacctgcatgcagtttactcttccgccattgcttgtaatggaggtaatgtctttgttgacctttg 430  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  1383755 ttttctcacctgcatgcagtttactcttccaccattgcttgtaatggaagtaatgtctttgttaacctttg 1383685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 1389860 - 1389790
Alignment:
Q  360 ttttctcacctgcatgcagtttactcttccgccattgcttgtaatggaggtaatgtctttgttgacctttg 430  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  1389860 ttttctcacctgcatgcagtttactcttccaccattgcttgtaatggaagtaatgtctttgttaacctttg 1389790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 271
Target Start/End: Complemental strand, 27378965 - 27378856
Alignment:
Q  162 taagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagc 261  Q
    |||||||||||| ||||| ||||||||| |||     |||| |||||  |||| ||||||||||| ||| || ||||||||||||||||||||| |||||    
T  27378965 taagtgcttatgtataagctatttctattacaaaagtaaaataaagtagaactgttttcatataaactacaatctgttttcataaactatcctggagagc 27378866  T
Q  262 ttatgaaaat 271  Q
    ||||||||||    
T  27378865 ttatgaaaat 27378856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 17989123 - 17989051
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||||| ||||||||||| ||||||  ||||||||||| || |||||||||||||||||||||    
T  17989123 aaaataaagtcaaactgttttcatataaactataatttgttttcataagctctcctgaagagcttatgaaaat 17989051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 36370645 - 36370711
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||| |||||| |||| ||||||| ||||| ||||||||||||||||||||||||| ||||    
T  36370645 aagttaaactgttttcacataagctataagttgtttccataaactatcctgaagagcttatggaaat 36370711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 44151575 - 44151476
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 303  Q
    ||||| ||||| ||| ||||||| ||||||| ||||||||||||||||| |||| |||||||| |||  ||||  |||||||  ||| ||||||||||||    
T  44151575 aaagtaaaactgtttccatataagctataagttgttttcataaactatcttgaaaagcttatggaaa--taagctgaaaacatcttatggacatgtcata 44151478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 12110330 - 12110402
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||| | ||||  ||||| ||||||||||||||||||| ||||| |||||| |||||||||||    
T  12110330 aaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaaat 12110402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 30456550 - 30456478
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||| | |||||||||||  ||||||  |||||||||||||||| || |||||||||||||||    
T  30456550 aaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaaat 30456478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 1413166 - 1413120
Alignment:
Q  211 aacttttttcatataatctataagctgttttcataaactatcctgaa 257  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||    
T  1413166 aacttttttcatataatctataagctgtttcaataaactatcttgaa 1413120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 47941250 - 47941365
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacatt----gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctg 255  Q
    |||||| ||||| ||||||| |||||||||||||      ||||||| || |||||| | ||||  |||||||||||| |||||||||||| |||||| |    
T  47941250 tataagcgcttaagaataagctatttctataacacaacaagacaaaataaggtcaaattattttagtataatctataaactgttttcataagctatcccg 47941349  T
Q  256 aagagcttatgaaaat 271  Q
     |||| ||||||||||    
T  47941350 gagagtttatgaaaat 47941365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 5369786 - 5369737
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcc 253  Q
    ||||||||||| ||||||||||  ||||||||||||||||||| ||||||    
T  5369786 aaagtcaaactgttttcatatatgctataagctgttttcataagctatcc 5369737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 161 - 265
Target Start/End: Complemental strand, 44917675 - 44917570
Alignment:
Q  161 ataagtgcttatgaataagttatttctataacattgacaaaag-aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 259  Q
    ||||| |||||| |||||||| |||||||||||  |   |||| ||||||||||| ||||  ||||||||||||| ||||| ||||||| ||||| ||||    
T  44917675 ataagcgcttataaataagttgtttctataacacaggataaagcaaagtcaaactgtttttgtataatctataagttgtttccataaaccatcctaaaga 44917576  T
Q  260 gcttat 265  Q
    | ||||    
T  44917575 gattat 44917570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 46104644 - 46104595
Alignment:
Q  222 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||| ||||||| ||||||||||| |||| |||||||||||||||||||    
T  46104644 tataagctataagttgttttcataagctatgctgaagagcttatgaaaat 46104595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 7623108 - 7623180
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| |||||| |||| |||| |||||| || |||||| ||||||||||||||| ||||||| ||| ||||||    
T  7623108 aaaataaagtccaactctttttatataagctgtaagctattttcataaactatcttgaagagtttacgaaaat 7623180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 25296971 - 25297019
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagctta 264  Q
    ||||||||||| ||||||||||||||||||||||| | || ||||||||    
T  25296971 ttttcatataaactataagctgttttcataaactaccatgtagagctta 25297019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 28340938 - 28340878
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 265  Q
    |||||||| | || |||||||| ||||||||||||||||||| |||||||  |||||||||    
T  28340938 aagtcaaattgttgtcatataagctataagctgttttcataagctatcctagagagcttat 28340878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 29363488 - 29363560
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||||| ||||||||| |  ||||||||||| ||||||  ||||||| |||||||||| ||||    
T  29363488 aaaataaagtcaaactgttttcatattagttataagctgttatcataagttatcctggagagcttatggaaat 29363560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 31338478 - 31338550
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||||| |||| ||||||  |||||| ||||| |||||||||||||   ||||||||||||||    
T  31338478 aaaataaagtcaaactgtttttatataagttataagttgtttccataaactatcctatggagcttatgaaaat 31338550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 38010684 - 38010756
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| |||| |||| | ||||||||||| ||||||||||||||||||| |||||||  ||| |||||| ||||    
T  38010684 aaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaat 38010756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 40689086 - 40689014
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||| ||| | ||||||||||| ||||||||||| ||||||| |||||||| | | |||||||||||    
T  40689086 aaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaat 40689014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 44910574 - 44910638
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 263  Q
    |||| |||||||||||||||||| | || ||| ||| ||||||||||||||||| || |||||||    
T  44910574 aaaataaagtcaaacttttttcacacaagctaaaagttgttttcataaactatcatggagagctt 44910638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 4966143 - 4966198
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||| |  |||||||||||||||||| | ||||||||||||||||| ||||    
T  4966143 ttttcatattaggtataagctgttttcataagccatcctgaagagcttatggaaat 4966198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 10190770 - 10190837
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||| ||||||||||| || |||  |||||||||||||||| || || |||||||| ||||    
T  10190770 aaagtcaaactgttttcatataaactgtaaattgttttcataaactattcttaaaagcttatggaaat 10190837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 47004033 - 47004104
Alignment:
Q  176 taagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataa 246  Q
    |||| ||||||||||||| | || |||| ||||||||||| |||| |||| | |||||||||||||||||||    
T  47004033 taagctatttctataacaatagataaaataaagtcaaactatttttatatgaactataagctgttttcataa 47004104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 3610880 - 3610774
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 258  Q
    |||||||||||||| ||||| |||||||| ||||   || ||||  ||| |||||| ||||  ||||| ||||||| ||||||| |||||||||||  ||    
T  3610880 tataagtgcttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttcgtaaactatcctagag 3610781  T
Q  259 agcttat 265  Q
    |||||||    
T  3610780 agcttat 3610774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 9527185 - 9527143
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataa 246  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||    
T  9527185 aaagtcaaactgttttcatataaactataagttgttttcataa 9527143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 23918927 - 23918993
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 265  Q
    |||| ||||||||| | ||||||||||| |||||| ||||  ||||||||||| |||||| ||||||    
T  23918927 aaaataaagtcaaattgttttcatataagctataatctgtaatcataaactattctgaagggcttat 23918993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 47177604 - 47177678
Alignment:
Q  197 acaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||| ||||| ||| | ||||||||||| |||||||||||||||| || ||||| || |||  ||||||||||    
T  47177604 acaaaacaaagttaaattgttttcatataagctataagctgttttcaaaagctatcttggagaatttatgaaaat 47177678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 3559010 - 3559071
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 265  Q
    ||||||| ||| ||| |||||||||||||||| |||||||| ||||||| || | |||||||    
T  3559010 aaagtcagactgtttacatataatctataagccgttttcattaactatcttgtatagcttat 3559071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 12792632 - 12792591
Alignment:
Q  230 ataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||    
T  12792632 ataagctattttcataagctatcttgaagagcttatgaaaat 12792591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 39169509 - 39169449
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 266  Q
    |||||| ||| ||||  |||||||||||| |||||||||||| |||||||| ||||||||||    
T  39169509 aagtcagactgtttttgtataatctataaactgttttcataagctatcctg-agagcttatg 39169449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 47559748 - 47559715
Alignment:
Q  160 tataagtgcttatgaataagttatttctataaca 193  Q
    ||||||||||||||||||||||||||||| ||||    
T  47559748 tataagtgcttatgaataagttatttctacaaca 47559715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 7244632 - 7244696
Alignment:
Q  160 tataagtgcttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcata 223  Q
    |||||||||||||| ||||| |||||||||| | |  || |||||||||||||||| ||||||||    
T  7244632 tataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcata 7244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 18350790 - 18350738
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaa 268  Q
    ||||| |||||  |||||||||||||||||| ||||| || ||||||||||||    
T  18350790 ttttcgtataagttataagctgttttcataagctatcatggagagcttatgaa 18350738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 265
Target Start/End: Complemental strand, 36484169 - 36484069
Alignment:
Q  167 gcttatgaataagttatttctataaca-ttgacaaaagaaagtcaa-acttttttcatataatctataagctgttttcataaactatcctgaagagctta 264  Q
    ||||||||||||| | |||||||||||   || |||| ||||||||   ||||||| || |||||||||| |||||||| ||  ||||||||||||||||    
T  36484169 gcttatgaataagctctttctataacacacgaaaaaataaagtcaatttttttttcgtagaatctataagttgttttcacaagttatcctgaagagctta 36484070  T
Q  265 t 265  Q
    |    
T  36484069 t 36484069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 304
Target Start/End: Complemental strand, 17259021 - 17258880
Alignment:
Q  162 taagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagag 260  Q
    ||||||||||||||||||  ||||| ||||||   ||||||| ||||||||||| ||||| || |||| |||||||||||||||||||||||||||||||    
T  17259021 taagtgcttatgaataagccatttccataacacgcgacaaaataaagtcaaactattttcgtacaatcaataagctgttttcataaactatcctgaagag 17258922  T
Q  261 cttatgaaaatttaagaagaaaacagtttacggacatgtcataa 304  Q
    ||||||||||  ||||  |||||||| ||| | |||||||||||    
T  17258921 cttatgaaaa--taagctgaaaacagcttatgaacatgtcataa 17258880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 304
Target Start/End: Complemental strand, 32408675 - 32408589
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 304  Q
    ||||||||||| |||||| || ||||||||| ||||||||||||||||||| |||  |||| ||||| ||  |||||||||||||||||    
T  32408675 ttttcatataagctataaactattttcataagctatcctgaagagcttatggaaa--taagcagaaaccaacttacggacatgtcataa 32408589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 2569778 - 2569726
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaa 268  Q
    ||||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  2569778 ttttcatataatctataagctgttttcataaactatcataaaaagcttatgaa 2569726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 14295476 - 14295540
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 263  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||| ||| |||||||| |||||||    
T  14295476 aaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagctt 14295540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 32059728 - 32059642
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataa 246  Q
    |||||||||||||| ||||| | ||| | ||||   || |||| ||||||||||| ||||||||||| |||||||||||||||||||    
T  32059728 tataagtgcttatgtataagctgtttttgtaactaagataaaataaagtcaaactgttttcatataagctataagctgttttcataa 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 26209546 - 26209454
Alignment:
Q  166 tgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttca-tataatctataagctgttttcataaactatcctgaag 258  Q
    |||||||| |||||||||||||||||||  || |||| |||||| || | |||||| ||||| ||||||||||||||||||| ||||| |||||    
T  26209546 tgcttatgtataagttatttctataacaa-gataaaataaagtccaattgttttcaatataagctataagctgttttcataagctatcatgaag 26209454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 271
Target Start/End: Complemental strand, 13604932 - 13604877
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||| || ||||||||||||||||  |||| ||||||||||||||||||    
T  13604932 ttttcatataaactttaagctgttttcataagttatcttgaagagcttatgaaaat 13604877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 33234292 - 33234403
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 259  Q
    ||||||||||| || ||||||||||||||  |||   | ||||  |||||||||| |||| |||||| ||||||||| ||||| |||  ||| |||||||    
T  33234292 tataagtgcttgtgtataagttatttctacgacaaatataaaatgaagtcaaactgtttttatataagctataagctattttcgtaagttatgctgaaga 33234391  T
Q  260 gcttatgaaaat 271  Q
    ||||||| ||||    
T  33234392 gcttatgtaaat 33234403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 38047955 - 38047888
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 266  Q
    |||| ||||||||| | ||||||||||  ||||| ||||||||||||| |||||||| ||||||||||    
T  38047955 aaaataaagtcaaattattttcatatatactatatgctgttttcataagctatcctggagagcttatg 38047888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 3237093 - 3237135
Alignment:
Q  229 tataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  3237093 tataagctgttttcataagctatcctaaagagcttatgaaaat 3237135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 10907310 - 10907396
Alignment:
Q  161 ataagtgcttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataa 246  Q
    ||||||| ||||| |||||||||||||||| | | ||  |||| ||| |||||||  ||||||||||||||||||||||||| ||||    
T  10907310 ataagtgtttatgtataagttatttctatagctaatggtaaaataaaatcaaactactttcatataatctataagctgtttttataa 10907396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 18543292 - 18543226
Alignment:
Q  204 aaagtcaaactt-ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaa 269  Q
    |||||||||||| |||| ||||||  |||||| ||||||||||| |||||||| |||||||||||||    
T  18543292 aaagtcaaacttgtttttatataagatataagttgttttcataagctatcctggagagcttatgaaa 18543226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 313
Target Start/End: Complemental strand, 41957534 - 41957439
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttcc 313  Q
    ||||||| |||  |||||||||||||||||| |||||||  ||| ||||||||||  ||||| |||||||  ||| |||||||||||||  |||||||    
T  41957534 ttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaaa--taagatgaaaacaacttatggacatgtcataagctgtttcc 41957439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 18857538 - 18857453
Alignment:
Q  162 taagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataa 246  Q
    |||||| ||||||||||| |||||| ||||||   || |||| ||||||||| | ||||  |||||||||||||||||||||||||    
T  18857538 taagtgtttatgaataagctatttcaataacacacgataaaataaagtcaaattgtttttctataatctataagctgttttcataa 18857453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 304
Target Start/End: Complemental strand, 21768280 - 21768194
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 304  Q
    ||||||||||| || ||||||||||||||||  |||| ||||||||||| |||||  ||||  ||||||||  || |||||||||||||    
T  21768280 ttttcatataaactttaagctgttttcataagttatcttgaagagcttacgaaaa--taagttgaaaacagcgtatggacatgtcataa 21768194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 9202848 - 9202776
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||| ||| | ||||||||||| | |||||||||||||||||  |||| |||||| |||||||||||    
T  9202848 aaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatgaaaat 9202776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 312
Target Start/End: Complemental strand, 10272525 - 10272420
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 304  Q
    |||||||| | ||||| ||||| ||||||| ||||||||||| | ||| || |||| |||||||||  ||||  |||||||  |||| ||||||||||||    
T  10272525 aagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaa--taagctgaaaacaacttacagacatgtcataa 10272428  T
Q  305 attgtttc 312  Q
     |||||||    
T  10272427 gttgtttc 10272420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 13193774 - 13193806
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagct 236  Q
    |||||||||||||||||||||||||||||||||    
T  13193774 aaagtcaaacttttttcatataatctataagct 13193806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 16945066 - 16945018
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagctta 264  Q
    |||||||| || ||||||||| ||||||| |||||||||||||||||||    
T  16945066 ttttcatagaagctataagctattttcattaactatcctgaagagctta 16945018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 29201532 - 29201576
Alignment:
Q  228 ctataagctgttttcataaactatcctgaagagcttatgaaaatt 272  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||    
T  29201532 ctataagctgttttcataacctatcctggagagcttatggaaatt 29201576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 32172644 - 32172737
Alignment:
Q  220 catataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttccat 315  Q
    ||||||| ||||||||||||||||||| ||||| |||||| || ||| |||  ||||  |||||  | ||| ||||||||||||| ||||||||||    
T  32172644 catataagctataagctgttttcataagctatcatgaagaactaatggaaa--taagctgaaaatggcttatggacatgtcataagttgtttccat 32172737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 12975317 - 12975384
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 266  Q
    |||| ||| ||||| | ||||||||||| ||||||||||| ||||||| ||||| || ||||||||||    
T  12975317 aaaataaaatcaaattgttttcatataagctataagctgtgttcataagctatcttggagagcttatg 12975384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 30217077 - 30217124
Alignment:
Q  224 taatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||||||| |||||||| |||||||| |||||||||| ||||    
T  30217077 taatctataagctgctttcataagctatcctggagagcttatggaaat 30217124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 35135802 - 35135727
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataag 234  Q
    |||||||| ||||| ||||| |||||||||||||   || |||| ||||||||||| ||||||||||| |||||||    
T  35135802 tataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataag 35135727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 8985636 - 8985698
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 266  Q
    ||||||||||| |||||||||||| |  ||||| ||||||||| |||||||  ||||||||||    
T  8985636 aaagtcaaactattttcatataatttgcaagctattttcataagctatcctatagagcttatg 8985698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 304
Target Start/End: Complemental strand, 28586866 - 28586763
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 298  Q
    |||| ||||||||||| |||||||||||  ||||||||||||| |  | |||||||  |||||||||  |||  ||||  |||||||| ||||||| |||    
T  28586866 aaaataaagtcaaactgttttcatataaattataagctgttttgacgagctatcctagagagcttatcgaaa--taagctgaaaacagcttacggatatg 28586769  T
Q  299 tcataa 304  Q
    ||||||    
T  28586768 tcataa 28586763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 29054896 - 29054950
Alignment:
Q  217 tttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||| ||||||| ||||| ||||||||||| || |||||||||| ||||    
T  29054896 tttcatataagctataagttgtttccataaactatcatgtagagcttatggaaat 29054950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 32197720 - 32197762
Alignment:
Q  229 tataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||||| ||||| |||||||||||| |||||||||||    
T  32197720 tataagctgtttccataagctatcctgaagaacttatgaaaat 32197762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 36639528 - 36639595
Alignment:
Q  235 ctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 304  Q
    |||||||||||| ||||| |||||||||||||||||  ||||| |||||||  ||| ||||| |||||||    
T  36639528 ctgttttcataagctatcttgaagagcttatgaaaa--taagaggaaaacaacttatggacacgtcataa 36639595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 18286779 - 18286816
Alignment:
Q  217 tttcatataatctataagctgttttcataaactatcct 254  Q
    |||||||| | |||||||||||||||||||||||||||    
T  18286779 tttcatattagctataagctgttttcataaactatcct 18286816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 36181260 - 36181219
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaa 257  Q
    |||||||||||  ||||| |||||||||||||||||||||||    
T  36181260 ttttcatataaattataatctgttttcataaactatcctgaa 36181219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 41929770 - 41929729
Alignment:
Q  229 tataagctgttttcataaactatcctgaagagcttatgaaaa 270  Q
    |||||| ||||||||||||||||| ||| |||||||||||||    
T  41929770 tataagttgttttcataaactatcatgaggagcttatgaaaa 41929729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 2568644 - 2568700
Alignment:
Q  215 tttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||| ||||| ||||||| ||||||||||| ||||| || |||||| ||||||||    
T  2568644 tttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaat 2568700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 3970780 - 3970708
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| |||||||| ||  |||| ||||||||| |||||  |||||||| |||| ||| |||||||||||||||    
T  3970780 aaaataaagtcaatctgctttcttataatctagaagctaatttcataagctatactggagagcttatgaaaat 3970708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 12425541 - 12425613
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||| ||| | ||||| ||||| |||||||||||||||| || ||||| || ||| |||||||||||    
T  12425541 aaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaat 12425613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 36539716 - 36539780
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 263  Q
    |||| |||||||| || ||||||||||| ||||||| |||||| ||||  ||| |||||||||||    
T  36539716 aaaataaagtcaacctgttttcatataagctataagttgtttttataagttattctgaagagctt 36539780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 41016149 - 41016221
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||| ||||||| ||||||||||| ||||||| |||||||| || | ||| || | |||||||||||||    
T  41016149 aaaataaattcaaactgttttcatataagctataagttgttttcacaagccatcatggaaagcttatgaaaat 41016221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 7009851 - 7009741
Alignment:
Q  1 ccatcccttccttataaggtattcaacttctttcgccaattgttctctggtcaatggtggaaggtatgaaagagtctcaaacttcttcttgccaatagga 100  Q
    |||||||||||| ||||||||||| ||||| || |||||||||||    || |  ||||||||||||||||| ||||||||||||||||||||||| ||     
T  7009851 ccatcccttcctgataaggtattctacttccttagccaattgttcctcagtaagaggtggaaggtatgaaagtgtctcaaacttcttcttgccaattggt 7009752  T
Q  101 ggccacaccta 111  Q
    |||||||||||    
T  7009751 ggccacaccta 7009741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 4006645 - 4006756
Alignment:
Q  161 ataagtgcttatgaataagttatttctataacat-tgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 259  Q
    ||||||||||||| ||||| |||||||||||||  ||| |||| ||||||||| | |||| |||||| ||||||| ||||||||||| ||||||   |||    
T  4006645 ataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccctgaga 4006744  T
Q  260 gcttatgaaaat 271  Q
    | ||||||||||    
T  4006745 ggttatgaaaat 4006756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 7006757 - 7006647
Alignment:
Q  1 ccatcccttccttataaggtattcaacttctttcgccaattgttctctggtcaatggtggaaggtatgaaagagtctcaaacttcttcttgccaatagga 100  Q
    |||||||||||| ||||||||||| ||||| || |||||||| ||    || |  ||||||||||||||||| || |||||||||||||||||||| ||     
T  7006757 ccatcccttcctgataaggtattctacttccttagccaattgatcctcagtaaggggtggaaggtatgaaagtgtttcaaacttcttcttgccaattggt 7006658  T
Q  101 ggccacaccta 111  Q
    ||||| |||||    
T  7006657 ggccaaaccta 7006647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 3528779 - 3528883
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 304  Q
    ||||||||||||| ||||||||  ||||  | |||||||| ||||||| || ||||||||||||||  ||||| |||||||  ||| |||||||||||||    
T  3528779 aagtcaaacttttctcatataaattatagaccgttttcatgaactatcttggagagcttatgaaaa--taagatgaaaacaagttatggacatgtcataa 3528876  T
Q  305 attgttt 311  Q
     ||||||    
T  3528877 gttgttt 3528883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 314
Target Start/End: Original strand, 4246397 - 4246493
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttcca 314  Q
    ||||||||||||||||||||||||||||||| ||||  || ||||| ||| ||||  ||||  |||||||| ||| ||||||||||| | |||||||||    
T  4246397 ttttcatataatctataagctgttttcataagctattatggagagcatataaaaa--taagttgaaaacagcttatggacatgtcatgagttgtttcca 4246493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 2117373 - 2117439
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 265  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||||||  ||||||  |||||||||    
T  2117373 aaaacaaagtcaaactattttcatataatctataagttgttttcataagttatcctagagagcttat 2117439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 1497951 - 1498023
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||||| ||||||||| |  ||||||  |||||||||||||||| || |||||||||||||||    
T  1497951 aaaataaagtcaaactgttttcatatgagttataagaagttttcataaactatcttggagagcttatgaaaat 1498023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 7006402 - 7006346
Alignment:
Q  367 acctgcatgcagtttactcttccgccattgcttgtaatggaggtaatgtctttgttg 423  Q
    |||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||||    
T  7006402 acctgcatacagttcactcttccaccattgcttgtgatggaggtaatgtcattgttg 7006346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 7009483 - 7009427
Alignment:
Q  367 acctgcatgcagtttactcttccgccattgcttgtaatggaggtaatgtctttgttg 423  Q
    |||||||| ||||| |||||||| |||||||||| ||||||||||||||| ||||||    
T  7009483 acctgcatacagttcactcttccaccattgcttgcaatggaggtaatgtcattgttg 7009427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 31671174 - 31671102
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||| ||| | ||||||||||| ||||||||||||||| |||||||||||  | |||||||||||||    
T  31671174 aaaacaaagttaaattgttttcatataagctataagctgttttcgtaaactatcctagatagcttatgaaaat 31671102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 315
Target Start/End: Complemental strand, 10616635 - 10616527
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 304  Q
    |||||||| |||||||||||||  ||||||| ||||| |||| ||||  || ||||||||| ||||  ||||  ||| |||  |||||||||||||||||    
T  10616635 aagtcaaagttttttcatataaaatataagccgttttaataagctattttggagagcttataaaaa--taagctgaacacaacttacggacatgtcataa 10616538  T
Q  305 attgtttccat 315  Q
     ||||||||||    
T  10616537 gttgtttccat 10616527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 33911361 - 33911310
Alignment:
Q  220 catataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||| ||||||||||||||||||||||||||||| || || |||||||    
T  33911361 catataatttataagctgttttcataaactatcctgaaaagtttgtgaaaat 33911310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 272
Target Start/End: Complemental strand, 29837145 - 29837111
Alignment:
Q  238 ttttcataaactatcctgaagagcttatgaaaatt 272  Q
    |||||||||||||||||||||||||||||||||||    
T  29837145 ttttcataaactatcctgaagagcttatgaaaatt 29837111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 317
Target Start/End: Complemental strand, 281948 - 281832
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 298  Q
    |||| ||||||||  | ||||||||||| ||||||||||| ||||||| |||||||  |||||| ||| |||  ||||  |||||||  |||  ||||||    
T  281948 aaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaa--taagctgaaaacaacttatagacatg 281851  T
Q  299 tcataaattgtttccatta 317  Q
    |||||| ||| ||||||||    
T  281850 tcataagttgcttccatta 281832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 1275136 - 1275191
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||| ||||||||||||||||||   ||||||| |||||||||| ||||    
T  1275136 ttttcatataagctataagctgttttcatatgttatcctggagagcttatggaaat 1275191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 246
Target Start/End: Complemental strand, 2027506 - 2027459
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataa 246  Q
    |||| ||||||||||| ||||||||||| |||||||||||| ||||||    
T  2027506 aaaataaagtcaaactattttcatataacctataagctgttctcataa 2027459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 3155146 - 3155209
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagct 262  Q
    |||| ||||||||||| ||| ||||||| ||||||||| |||||||||  ||||||| ||||||    
T  3155146 aaaacaaagtcaaactgtttccatataacctataagctattttcataagatatcctggagagct 3155209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 13907822 - 13907889
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||| ||||  || ||||| |||| |||||||| || ||||| ||||||||||||||||||    
T  13907822 aaagtcaaactgtttttgtaaaatctgtaagttgttttcaaaagctatcttgaagagcttatgaaaat 13907889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 18264304 - 18264371
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||| | |||||||| ||  |||||||| ||||| ||||||||||||||||| ||||| ||||    
T  18264304 aaagtcaaattgttttcatacaagttataagctattttcttaaactatcctgaagaggttatggaaat 18264371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 315
Target Start/End: Original strand, 5328907 - 5329057
Alignment:
Q  163 aagtgcttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagc 261  Q
    ||||||||| |  ||||||||||||||||| |  || |||| ||||||||||  |||| ||||||| |||||||||||||| |||  |||| || ||||     
T  5328907 aagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaaccatttttatataat-tataagctgttttcgtaagttatcatggagagt 5329005  T
Q  262 ttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttccat 315  Q
    |||||||||  ||||| |||| ||| ||| ||||||  ||||| || |||||||    
T  5329006 ttatgaaaa--taagatgaaagcagcttatggacataacataagttatttccat 5329057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 7149553 - 7149507
Alignment:
Q  219 tcatataatctataagctgttttcataaactatcctgaagagcttat 265  Q
    |||||||| |||||| || |||||||||||||||||| |||||||||    
T  7149553 tcatataagctataaactattttcataaactatcctggagagcttat 7149507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 258
Target Start/End: Original strand, 10860958 - 10861000
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaag 258  Q
    ||||| ||||||||||||||| ||||||||| |||||||||||    
T  10860958 ttttcgtataatctataagctattttcataagctatcctgaag 10861000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 304
Target Start/End: Original strand, 27894017 - 27894119
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 298  Q
    |||| ||||||||| | |||| |||||| |||| || |||||||||||  |||| |||| ||||||||||||  ||||  |||||||||||| ||||||     
T  27894017 aaaataaagtcaaattgttttaatataaactattag-tgttttcataagatatcttgaaaagcttatgaaaa--taagctgaaaacagtttatggacata 27894113  T
Q  299 tcataa 304  Q
    ||||||    
T  27894114 tcataa 27894119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 311
Target Start/End: Complemental strand, 725755 - 725645
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 298  Q
    |||| ||||||||||| |||| |||||| ||||| | ||||||  ||| |||| |  ||||||||||| ||||  |||  ||||| ||| ||||||||||    
T  725755 aaaaaaaagtcaaactgtttttatataaactatatgttgtttttgtaacctattcgaaagagcttatggaaat--aagctgaaaatagtctacggacatg 725658  T
Q  299 tcataaattgttt 311  Q
    |||||| ||||||    
T  725657 tcataagttgttt 725645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 2167989 - 2168058
Alignment:
Q  201 aagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaa 270  Q
    ||||| |||||||| ||||| | |||  ||| || ||| |||||||||||||||| ||||||||||||||    
T  2167989 aagaatgtcaaactgttttcgtgtaagttatgagatgtcttcataaactatcctggagagcttatgaaaa 2168058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 2179622 - 2179691
Alignment:
Q  201 aagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaa 270  Q
    ||||| |||||||| ||||| | |||  ||| || ||| |||||||||||||||| ||||||||||||||    
T  2179622 aagaatgtcaaactgttttcgtgtaagttatgagatgtcttcataaactatcctggagagcttatgaaaa 2179691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 2735062 - 2735111
Alignment:
Q  222 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||||||||||||||||| | ||| |||| | |||||||||||    
T  2735062 tataatctataagctgttttcataagcaatcttgaacaacttatgaaaat 2735111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 5550107 - 5550148
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcata 245  Q
    ||||||||| | ||||||||||| ||||||||||||||||||    
T  5550107 aaagtcaaattgttttcatataagctataagctgttttcata 5550148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 24838826 - 24838777
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttat 265  Q
    ||||||||||| |||||||||| |||||||| ||||| || |||||||||    
T  24838826 ttttcatataagctataagctgatttcataagctatcatggagagcttat 24838777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 29274363 - 29274282
Alignment:
Q  166 tgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataa 246  Q
    |||||||| ||||| |||||||||| ||   || |||| ||||||||| | ||||||||||| |||||| ||||||||||||    
T  29274363 tgcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcataa 29274282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 31324437 - 31324498
Alignment:
Q  210 aaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||| ||||||| ||| ||||||||||  ||||||| ||||| |||||||||||| |||||    
T  31324437 aaactattttcatgtaagctataagctgcattcataagctatcatgaagagcttattaaaat 31324498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 33887771 - 33887872
Alignment:
Q  171 atgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaa 269  Q
    ||||||||| ||||| |||||||   || |||| ||| ||||||| ||||  ||||||| |||| |||||||||||| ||||||||||  ||||||| ||    
T  33887771 atgaataagatatttttataacacaagataaaacaaactcaaactgttttagtataatcaataaactgttttcataagctatcctgaaatgcttatggaa 33887870  T
Q  270 at 271  Q
    ||    
T  33887871 at 33887872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 1401102 - 1401146
Alignment:
Q  222 tataatctataagctgttttcataaactatcctgaagagcttatg 266  Q
    ||||| ||||||||||||||||||| ||||| || ||||||||||    
T  1401102 tataagctataagctgttttcataagctatcatggagagcttatg 1401146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 8420337 - 8420225
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacat-tgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 258  Q
    |||||||||||||| | ||||||||||| ||| |  ||| |||| ||||||||||| | || ||||||  ||||||||||| || ||| ||||  || ||    
T  8420337 tataagtgcttatgtacaagttatttctttaataaatgataaaataaagtcaaactgtgtttatataaaatataagctgttctcgtaagctataatggag 8420238  T
Q  259 agcttatgaaaat 271  Q
    |||||||| ||||    
T  8420237 agcttatggaaat 8420225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 10400239 - 10400311
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||| | || |||||||| ||||||| ||| |||||||  |||||||  ||||||||||||||    
T  10400239 aaaataaagtcaaattgttatcatataagctataagatgtcttcataagatatcctggtgagcttatgaaaat 10400311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 13907409 - 13907457
Alignment:
Q  220 catataatctataagctgttttcataaactatcctgaagagcttatgaa 268  Q
    |||||||| | |||| ||||||||||| ||||||| |||||||||||||    
T  13907409 catataatttgtaagttgttttcataagctatcctaaagagcttatgaa 13907457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 33787845 - 33787773
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||| |  ||||||||||  ||||||||||||||||||  |||| || |||||||||| ||||    
T  33787845 aaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatcttggagagcttatggaaat 33787773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 5e-20; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 175 - 315
Target Start/End: Complemental strand, 24887408 - 24887270
Alignment:
Q  175 ataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaattt 273  Q
    ||||| ||||||||||||| | || |||| ||||||||||| | ||||||||| ||| ||||||||||||||| |||||||| ||||||||||  ||  |    
T  24887408 ataagctatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatgggaa--t 24887311  T
Q  274 aagaagaaaacagtttacggacatgtcataaattgtttccat 315  Q
    |||  |||||||| |||  |||||||||||||||||||||||    
T  24887310 aagctgaaaacag-ttaatgacatgtcataaattgtttccat 24887270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 36101499 - 36101610
Alignment:
Q  161 ataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 259  Q
    ||||||| ||||||||||| ||||||| ||| ||  || |||| |||||||||||  |||| ||||||||||||| |||||   || |||||||||||||    
T  36101499 ataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataatctataagttgtttcattatactatcctgaaga 36101598  T
Q  260 gcttatgaaaat 271  Q
    ||||||||||||    
T  36101599 gcttatgaaaat 36101610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 303
Target Start/End: Complemental strand, 20502157 - 20502066
Alignment:
Q  210 aaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 303  Q
    ||||| ||||||||||  ||||||||||||||||||| |||||||||||||||||||| ||  ||||  |||||||  | ||||||||||||||    
T  20502157 aaactgttttcatatacgctataagctgttttcataagctatcctgaagagcttatgagaa--taagctgaaaacaaatgacggacatgtcata 20502066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 304
Target Start/End: Complemental strand, 27291039 - 27290898
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 259  Q
    |||||||||||| | ||||| |||||||||||||  || |||| ||| || |||||||||||||||||||| ||||||||| ||| | |||||||| |||    
T  27291039 tataagtgcttaggtataaggtatttctataacaa-gataaaataaattcgaacttttttcatataatctaaaagctgtttgcattagctatcctgcaga 27290941  T
Q  260 gcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 304  Q
    | | ||| |||  ||||  |||||||| ||| || ||||||||||    
T  27290940 gttcatggaaa--taagctgaaaacagcttatgggcatgtcataa 27290898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 25453959 - 25453887
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||||| ||||| ||||| |||||| || |||||||||||||||||| | |||||||||||||    
T  25453959 aaaataaagtcaaactgttttcgtataacctataacctattttcataaactatcctggaaagcttatgaaaat 25453887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 304
Target Start/End: Complemental strand, 33405250 - 33405163
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 304  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||| |||||| ||| |||||  |||||||||||| | |||| ||||||    
T  33405250 ttttcatataagctataagctgttttcataagctatcttgaagaacttatg-aaagttaagccgaaaacagtttatgaacatatcataa 33405163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 312
Target Start/End: Complemental strand, 3044384 - 3044248
Alignment:
Q  175 ataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaattt 273  Q
    |||| ||||||||||||| |  ||||||| |||  ||| || |||||||||||||||||| |||||||| ||  ||| |||| ||||||||||||||  |    
T  3044384 ataaattatttctataacgaaagacaaaataaaaccaatctgttttcatataatctataacctgttttcttatgctaacctggagagcttatgaaaa--t 3044287  T
Q  274 aagaagaaaacagtttacggacatgtcataaattgtttc 312  Q
    |||  |||||||| ||| | ||||||||||| |||||||    
T  3044286 aagttgaaaacagcttatgaacatgtcataagttgtttc 3044248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 24158642 - 24158531
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacat-tgacaaaag-aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaa 257  Q
    |||||||||||||| |||||||||||||||||||  |||  |||| ||||| ||||| |||  ||||||   ||||||||||||||||| |||||||| |    
T  24158642 tataagtgcttatgtataagttatttctataacaaatgaataaagtaaagtgaaactgttt--atataagtaataagctgttttcataagctatcctgga 24158545  T
Q  258 gagcttatgaaaat 271  Q
    ||||||||| ||||    
T  24158544 gagcttatggaaat 24158531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 20192744 - 20192664
Alignment:
Q  162 taagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgtttt 241  Q
    |||||||||||| ||||| ||||| |||||||   || |||| ||||||||||  ||||||||||||||||||||||||||    
T  20192744 taagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataagctgtttt 20192664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 52618990 - 52619083
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgttt 311  Q
    |||||||||||  ||||||||||||||| || ||||| |||||||||| ||||||  ||||  ||||| || ||| | ||||||||||||||||||    
T  52618990 ttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaa--taaggtgaaaatagcttatgaacatgtcataaattgttt 52619083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 36139809 - 36139920
Alignment:
Q  161 ataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 259  Q
    ||||||| ||||||||||| ||||||| ||| ||  || |||| |||||||||||  |||| ||||| ||||||| |||||   || |||||| ||||||    
T  36139809 ataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataagctataagttgtttcattatactatcttgaaga 36139908  T
Q  260 gcttatgaaaat 271  Q
    ||||||||||||    
T  36139909 gcttatgaaaat 36139920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 265
Target Start/End: Original strand, 27792802 - 27792908
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 258  Q
    |||||||||||||| ||||| |||||| | ||||   || |||| || |||||||| ||||||||||| ||  ||| ||||||||||||||||| || ||    
T  27792802 tataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagctgcaagttgttttcataaactatcatgtag 27792901  T
Q  259 agcttat 265  Q
    |||||||    
T  27792902 agcttat 27792908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 33965591 - 33965522
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataat--ctataagctgttttcataaactatcctgaagagcttatg 266  Q
    |||| ||||||||||| |||||||||||   ||||||| ||||||||||| ||||| |||||||||||||    
T  33965591 aaaataaagtcaaactgttttcatataaaagctataagatgttttcataagctatcttgaagagcttatg 33965522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 2201098 - 2201143
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcat 244  Q
    |||| ||||||||||| ||||||||||| |||||||||||||||||    
T  2201098 aaaacaaagtcaaactgttttcatataagctataagctgttttcat 2201143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 20874387 - 20874339
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagctta 264  Q
    ||||||||||| ||||||||||||||||||| ||||||| || ||||||    
T  20874387 ttttcatataaactataagctgttttcataagctatcctaaatagctta 20874339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 22232756 - 22232868
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacat-tgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 258  Q
    ||||| |||| ||| ||||| ||||| |||||||  ||| |||| ||||||||||| |||||||||||    |||||| ||||||||| ||||| || ||    
T  22232756 tataaatgctcatgtataagctatttatataacaaatgataaaataaagtcaaactgttttcatataagtcgtaagctattttcataagctatcatgtag 22232855  T
Q  259 agcttatgaaaat 271  Q
     ||||||||||||    
T  22232856 ggcttatgaaaat 22232868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 43875624 - 43875684
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 265  Q
    |||||||||| || |||||||| ||||||| ||||||||||| ||||| || |||||||||    
T  43875624 aagtcaaactgttctcatataagctataagttgttttcataagctatcatggagagcttat 43875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 47904146 - 47904098
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagctta 264  Q
    |||||||||||||||||||  |||||||||| ||||| |||||||||||    
T  47904146 ttttcatataatctataagtggttttcataagctatcgtgaagagctta 47904098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 315
Target Start/End: Original strand, 43115048 - 43115140
Alignment:
Q  221 atataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttccat 315  Q
    |||||| ||||||| ||||||||| ||||||| |  |||||||||| ||||  |||  |||||||  ||| ||||||||||||| ||||||||||    
T  43115048 atataagctataagttgttttcatgaactatcattgagagcttatggaaat--aagctgaaaacaagttatggacatgtcataagttgtttccat 43115140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 313
Target Start/End: Complemental strand, 1217883 - 1217788
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttcc 313  Q
    ||||||| |||  |||||||||||||||||| |||||||  ||| |||||||||   ||||| |||||||  ||| |||||||||||||  |||||||    
T  1217883 ttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaa--gtaagatgaaaacaacttatggacatgtcataagctgtttcc 1217788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 33674792 - 33674710
Alignment:
Q  161 ataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataa 246  Q
    ||||| ||||||  ||||| |||||||||||||   |||||| ||||| ||| ||||| ||||||| |||||||||||||||||||    
T  33674792 ataagcgcttatttataagctatttctataacaa--acaaaa-aaagttaaattttttgcatataaactataagctgttttcataa 33674710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 38462251 - 38462305
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcc 253  Q
    |||| ||||||||||| ||||||||||  |||||| |||||||||||| ||||||    
T  38462251 aaaataaagtcaaactgttttcatatatgctataaactgttttcataagctatcc 38462305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 315
Target Start/End: Original strand, 54775061 - 54775211
Alignment:
Q  163 aagtgcttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagc 261  Q
    ||||||||| |  ||||||||||||||||| |  || |||| ||||||||||  |||| ||||||| |||||||||||||| |||  |||| || ||||     
T  54775061 aagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaaccatttttatataat-tataagctgttttcgtaagttatcatggagagt 54775159  T
Q  262 ttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttccat 315  Q
    |||||||||  ||||| |||| ||| ||| ||||||  ||||| || |||||||    
T  54775160 ttatgaaaa--taagatgaaagcagcttatggacataacataagttatttccat 54775211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 1395604 - 1395689
Alignment:
Q  163 aagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaa 247  Q
    |||||| |||| ||||| |||||||||||||   || |||| ||||||||| | ||||||||||| |||| | |||||||||||||    
T  1395604 aagtgcatatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctatgaactgttttcataaa 1395689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 252
Target Start/End: Complemental strand, 19679428 - 19679375
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatc 252  Q
    |||| ||||||||||| ||||| ||||| ||||||| |||||| ||||||||||    
T  19679428 aaaataaagtcaaactgttttcttataagctataagttgtttttataaactatc 19679375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 22203423 - 22203472
Alignment:
Q  222 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||||| ||||||||||| ||||| || ||| |||||||||||    
T  22203423 tataatctataagttgttttcataagctatcttggagaacttatgaaaat 22203472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 22343589 - 22343650
Alignment:
Q  210 aaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||| |||||||||||  |||||||||||| ||||| |||| |||||||| ||||| ||||    
T  22343589 aaactgttttcatataagttataagctgtttccataagctatactgaagagattatgcaaat 22343650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 28306128 - 28306193
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctta 264  Q
    |||| ||||||||||| |||||||||||  || ||| ||||||||||| |||| | ||||||||||    
T  28306128 aaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 28306193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 1816553 - 1816625
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||||| ||||  |||||  |||||| ||||||||||| |||| ||| ||||||||| |||||    
T  1816553 aaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaat 1816625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 2071058 - 2071098
Alignment:
Q  231 taagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||||||||| ||||  ||||||||||||||||||    
T  2071058 taagctgttttcataagctatgatgaagagcttatgaaaat 2071098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 2197806 - 2197878
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||| ||||||| ||||||||||| | ||||||| |||||||||  | || || |||||||||||||||    
T  2197806 aaaataaaatcaaactattttcatataagcaataagctattttcataacttgtcttggagagcttatgaaaat 2197878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 19679855 - 19679807
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatc 252  Q
    ||||||| ||| ||||||||||| ||||| | |||||||||||||||||    
T  19679855 aaagtcatactgttttcatataagctataggttgttttcataaactatc 19679807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 21367637 - 21367709
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||| ||| | ||||| |||||| |||||| ||||||||||| ||||| || ||| |||||||||||    
T  21367637 aaaataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaat 21367709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 21872363 - 21872315
Alignment:
Q  207 gtcaaacttttttcatataatctataagctgttttcataaactatcctg 255  Q
    |||||| |||||| |||||| ||||||| ||||||||||| ||||||||    
T  21872363 gtcaaatttttttgatataagctataagttgttttcataagctatcctg 21872315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 23315596 - 23315668
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||| | ||||||||||  ||||||| ||||| ||||| |||| || ||||||||||| ||||    
T  23315596 aaaataaagtcaaattgttttcatataggctataagatgtttccataagctattctaaagagcttatggaaat 23315668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 24785175 - 24785247
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| |||||||| || ||||  ||||||||||||  ||||||||||| |||||||  |||||||||| ||||    
T  24785175 aaaataaagtcaatctgtttttgtataatctataacgtgttttcataagctatcctcgagagcttatgtaaat 24785247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 32064410 - 32064481
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||| | |||| ||| || ||||| | ||| ||||||||||||||| ||||||||||||||||    
T  32064410 aaaataaagtcaaattatttttataaaa-ctatatgttgtgttcataaactatcctaaagagcttatgaaaat 32064481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 42753575 - 42753631
Alignment:
Q  198 caaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcct 254  Q
    ||||| |||||||||| |||||||||||| ||||||| |||||| | || |||||||    
T  42753575 caaaacaaagtcaaacatttttcatataagctataagttgtttttacaagctatcct 42753631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 52440745 - 52440689
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatt 272  Q
    |||||| |||| ||||||||| |||||||||  |||| |||||| ||||||||||||    
T  52440745 ttttcaaataagctataagctattttcataatttatcttgaagaacttatgaaaatt 52440689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 204 - 315
Target Start/End: Complemental strand, 6231912 - 6231802
Alignment:
Q  204 aaagtcaaact-tttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcat 302  Q
    ||||||||||| |||||||||||||||||||||||||||| ||| ||| |||||||| |||||  |||  ||||  |||||||||||| |||||||||||    
T  6231912 aaagtcaaactgtttttcatataatctataagctgttttcgtaagctaacctgaagaacttatagaaa--taagctgaaaacagtttatggacatgtcat 6231815  T
Q  303 aaattgtttccat 315  Q
     | ||||||||||    
T  6231814 tagttgtttccat 6231802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 268
Target Start/End: Complemental strand, 33527286 - 33527178
Alignment:
Q  161 ataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 259  Q
    ||||| ||||||||||||| |||||||| ||||   || |||| | ||||||||| |||||||||||||||||||||||||||||||  ||||||  |||    
T  33527286 ataagcgcttatgaataagctatttctaaaacaaaagataaaatacagtcaaactgttttcatataatctataagctgttttcataagttatcctcgaga 33527187  T
Q  260 gcttatgaa 268  Q
     ||||||||    
T  33527186 tcttatgaa 33527178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 264
Target Start/End: Original strand, 17269180 - 17269285
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 258  Q
    |||||||||||||| |||||||||||||| ||||   |  |||| ||||||||| | ||||||||||| | ||||| ||||||||||| |||||||| ||    
T  17269180 tataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggag 17269279  T
Q  259 agctta 264  Q
    ||||||    
T  17269280 agctta 17269285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 7218174 - 7218102
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||| | ||||||||||| ||||||| ||||||||||| |||||||| ||| |||||||||||    
T  7218174 aaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaat 7218102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 271
Target Start/End: Original strand, 44422646 - 44422741
Alignment:
Q  175 ataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||| ||||| |||||||| || |||| ||  ||||||| ||||||||||| ||||||||| |||| |||| |||||||| |||||||||||||||    
T  44422646 ataagctatttttataacat-gataaaataatctcaaactgttttcatataagctataagctatttttataagctatcctggagagcttatgaaaat 44422741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 48830207 - 48830113
Alignment:
Q  169 ttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagct 262  Q
    ||||| ||||||||||||||| || |  || |||| ||||||||||| ||||||||||| |||||| |||||||||||| |||| || |||||||    
T  48830207 ttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataaactgttttcataagctattctaaagagct 48830113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 4078242 - 4078177
Alignment:
Q  206 agtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||||| ||  ||||| ||||||||    
T  4078242 agtcaaactattttcatataatctataagttgttttcataagctatcatggcgagctaatgaaaat 4078177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 37272686 - 37272625
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagag 260  Q
    |||| |||||||| || ||||||||||| |||||||||||||||||||| ||||||| ||||    
T  37272686 aaaataaagtcaatctgttttcatataagctataagctgttttcataaattatcctggagag 37272625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 10854663 - 10854775
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 258  Q
    |||||||| |||||||||||||||||||  || |   || |||| |||||||||||  |||  ||||||||||| | |||||||||| |||||||||||     
T  10854663 tataagtggttatgaataagttatttctgaaatacaagataaaataaagtcaaactgattttgtataatctatatgttgttttcatatactatcctgaac 10854762  T
Q  259 agcttatgaaaat 271  Q
    |||||| ||||||    
T  10854763 agcttaagaaaat 10854775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 315
Target Start/End: Original strand, 43771885 - 43771921
Alignment:
Q  279 gaaaacagtttacggacatgtcataaattgtttccat 315  Q
    |||||||||||||||||||||||||||||||||||||    
T  43771885 gaaaacagtttacggacatgtcataaattgtttccat 43771921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 305
Target Start/End: Original strand, 30257653 - 30257757
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 298  Q
    |||| ||||||||||| ||| ||||||| || |||| |||||||||||||||||||| || ||||||  |||  ||||  |||||||| ||| | |||||    
T  30257653 aaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaa--taagctgaaaacagcttatgaacatg 30257750  T
Q  299 tcataaa 305  Q
    |||||||    
T  30257751 tcataaa 30257757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 47960715 - 47960660
Alignment:
Q  208 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 263  Q
    ||||||| ||||||||||| |||||||| ||||||||||  |||||||||||||||    
T  47960715 tcaaactattttcatataagctataagccgttttcataagttatcctgaagagctt 47960660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 4622072 - 4622179
Alignment:
Q  208 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaatt 307  Q
    ||||||| ||||||||||| ||||||||||||| ||||  ||||| || ||||||| ||||||  ||||   ||||||| ||| |||||||||||||  |    
T  4622072 tcaaactcttttcatataagctataagctgtttccatatgctatcttggagagcttgtgaaaa--taagctaaaaacagcttatggacatgtcataagat 4622169  T
Q  308 gtttccatta 317  Q
    ||| ||||||    
T  4622170 gttcccatta 4622179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 25005880 - 25005826
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaa 270  Q
    ||||||||||| ||||||| ||||||||||| |||||||| ||||||||| ||||    
T  25005880 ttttcatataagctataagttgttttcataagctatcctggagagcttataaaaa 25005826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 304
Target Start/End: Complemental strand, 27887218 - 27887115
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 298  Q
    |||| ||||||||||  ||| ||||||| ||||||| ||||||||||||||||| || ||||| ||| ||||  ||||   |||||| |||| |||||||    
T  27887218 aaaataaagtcaaacaatttccatataagctataagttgttttcataaactatcatggagagcatataaaaa--taagctaaaaacaatttatggacatg 27887121  T
Q  299 tcataa 304  Q
    ||||||    
T  27887120 tcataa 27887115  T

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Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 29723440 - 29723575
Alignment:
Q  180 ttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaag 279  Q
    |||||||||||||   || |||| ||| ||||||| ||||||||||  ||||||| || ||||| || ||| |||| || | ||||| ||||  |||  |    
T  29723440 ttatttctataacgaagataaaataaactcaaactattttcatatatgctataagttgctttcacaagctaccctgcagtggttatgtaaat--aagttg 29723537  T
Q  280 aaaacagtttacggacatgtcataaattgtttccatta 317  Q
    ||||||||||| |||||||||||||  |||||||||||    
T  29723538 aaaacagtttatggacatgtcataagctgtttccatta 29723575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 260
Target Start/End: Complemental strand, 4363724 - 4363671
Alignment:
Q  207 gtcaaacttttttcatataatctataagctgttttcataaactatcctgaagag 260  Q
    |||||||| ||||||||||| |||||| || ||||||||| |||||||||||||    
T  4363724 gtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 4363671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 4700143 - 4700094
Alignment:
Q  222 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||| |||||| ||||||| ||||||||||||| |||||||||||||||    
T  4700143 tataagctataaactgtttttataaactatcctggagagcttatgaaaat 4700094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 7137075 - 7137026
Alignment:
Q  222 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||||||||||||||||| ||||| || ||| |||||||||||    
T  7137075 tataatctataagctgttttcataagctatcttggagaacttatgaaaat 7137026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 7472304 - 7472353
Alignment:
Q  222 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||||||||||| ||||| ||||| || |||||||||||||||    
T  7472304 tataatctataagctgtttccataagctatcttggagagcttatgaaaat 7472353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 10199533 - 10199436
Alignment:
Q  175 ataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||||||||||    || |||| ||||||||||| ||||| ||||||| ||||||| ||||||||| ||||  |  |||||||||||||||    
T  10199533 ataagttatttctataacccaagataaaataaagtcaaactattttcgtataatcgataagcttttttcataagctattttagagagcttatgaaaat 10199436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 34290229 - 34290278
Alignment:
Q  222 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||| ||||||||||||||||||| ||||| |||||| |||||||||||    
T  34290229 tataagctataagctgttttcataagctatcttgaagaacttatgaaaat 34290278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 10581177 - 10581125
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactat 251  Q
    |||| ||||||||||||||||||| ||| ||||||| ||||||||||| ||||    
T  10581177 aaaataaagtcaaacttttttcatttaagctataagttgttttcataagctat 10581125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 315
Target Start/End: Original strand, 11695848 - 11695945
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttccat 315  Q
    |||||| |||| ||||||  |||||| ||| ||||| ||| | |||||||||||||  |||  |||||||| ||| |||||||||||||| |||||||||    
T  11695848 ttttcaaataagctataaaatgtttttatagactattctggaaagcttatgaaaat--aagttgaaaacagcttatggacatgtcataaactgtttccat 11695945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 312
Target Start/End: Complemental strand, 30259624 - 30259475
Alignment:
Q  163 aagtgcttatgaataagttatttctataacattg-acaaaagaaagtcaaacttttttcatataatctataagctgttttcataaa-ctatcctgaagag 260  Q
    ||||||||||| | ||| |||||||||||||    | |||| |||||||||||  ||| |||||| ||||||||||||| |||||| ||||| || ||||    
T  30259624 aagtgcttatgcacaagctatttctataacaaaatataaaataaagtcaaactgctttgatataagctataagctgtttgcataaagctatcatggagag 30259525  T
Q  261 cttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttc 312  Q
    |||||| |||  ||||  ||||||| ||||  |||||||| ||| |||||||    
T  30259524 cttatggaaa--taagttgaaaacaatttattgacatgtcgtaagttgtttc 30259475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 34179972 - 34179900
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||| | |||| || ||| |||||| ||||||||||||||||||||||| || ||||| ||||    
T  34179972 aaaataaagtcaaattgttttaatctaagctataaactgttttcataaactatcctgaaaagtttatggaaat 34179900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 49517015 - 49517087
Alignment:
Q  175 ataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataa 246  Q
    |||||||||||||||||||   || |||| ||||||||| | ||||||| ||| |||||||||||||||||||    
T  49517015 ataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataa 49517087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 314
Target Start/End: Original strand, 4549217 - 4549313
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttcca 314  Q
    |||| |||||| |||||||||| ||||| ||||||||| | | |||||||| ||||  |||  |||||||  |||  ||||||||||||||||||||||    
T  4549217 tttttatataagctataagctgctttcacaaactatccaggatagcttatggaaat--aagctgaaaacaacttatagacatgtcataaattgtttcca 4549313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 270
Target Start/End: Complemental strand, 7274079 - 7273968
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 258  Q
    ||||| |||||||| ||| ||||||| |||||||   ||  ||| ||||||||| | |||||||| ||  |||||||||||| ||||||||| | |||||    
T  7274079 tataaatgcttatgtatatgttatttttataacaaaagatgaaataaagtcaaattgttttcatacaagttataagctgtttccataaactaccttgaag 7273980  T
Q  259 agcttatgaaaa 270  Q
    ||||||| ||||    
T  7273979 agcttattaaaa 7273968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 24913438 - 24913505
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||| || ||||||||||  |||||||||||| |||||||||||||  |||| || ||||||||    
T  24913438 aaagtcaagctattttcatatatgctataagctgttctcataaactatccacaagacctcatgaaaat 24913505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 311
Target Start/End: Complemental strand, 31517822 - 31517730
Alignment:
Q  217 tttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgttt 311  Q
    |||||||||| ||||||||||| ||||||| || || || ||||||||||||||  ||||  |||||||| ||| | ||||||||| | ||||||    
T  31517822 tttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaa--taagctgaaaacagcttatgaacatgtcatgagttgttt 31517730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 35017563 - 35017618
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||| ||||||||||| ||||||||||||| || ||||| |||||||||| ||||    
T  35017563 ttttcgtataatctatatgctgttttcataagctgtcctggagagcttatggaaat 35017618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 3924604 - 3924666
Alignment:
Q  209 caaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||| ||||| |||||||||| || |||||| |||| ||||||||||||| ||||| ||||    
T  3924604 caaactgttttcgtataatctattagttgtttttataagctatcctgaagagtttatggaaat 3924666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 15361688 - 15361730
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataa 246  Q
    ||||||||| | ||||||||||| |||||||||||||||||||    
T  15361688 aaagtcaaattattttcatataagctataagctgttttcataa 15361730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 25006134 - 25006068
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 265  Q
    |||| ||||||||| | ||||||||||| ||||||| ||||||||||| ||||| || ||| |||||    
T  25006134 aaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcttggagatcttat 25006068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 4549637 - 4549576
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 265  Q
    ||||| ||||| |||||||| || ||||||| ||||||||||| | |||||| |||||||||    
T  4549637 aaagtaaaactgttttcatacaagctataagatgttttcataagcaatcctggagagcttat 4549576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 304
Target Start/End: Original strand, 6292468 - 6292566
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 303  Q
    ||||||||| | |||||| ||||  |||||||| ||||| ||||||||  || ||||||||||||||  ||||  |||||||| ||| | ||||||||||    
T  6292468 aaagtcaaattattttcacataacttataagctattttcgtaaactattttggagagcttatgaaaa--taagctgaaaacagcttatgaacatgtcata 6292565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 16322826 - 16322891
Alignment:
Q  206 agtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||| |||||||| ||  |||||||||||||||||  ||||  ||||||||||||| ||||    
T  16322826 agtcaaactattttcatagaagttataagctgttttcataggctattttgaagagcttatggaaat 16322891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 25479570 - 25479623
Alignment:
Q  218 ttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||  ||||||| ||||||||||| |||||||  |||||||||||||||    
T  25479570 ttcatataggctataagttgttttcataagctatcctagagagcttatgaaaat 25479623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 244
Target Start/End: Complemental strand, 29007840 - 29007771
Alignment:
Q  176 taagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcat 244  Q
    ||||||||||||||||||   || |||  ||||||||||| ||||||||||| ||||||| |||||||||    
T  29007840 taagttatttctataacaaaagaaaaattaaagtcaaactattttcatataagctataagttgttttcat 29007771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 272
Target Start/End: Complemental strand, 44032099 - 44032026
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatt 272  Q
    |||| ||||||||| | ||||||||||| |||||| || ||||| |||  |||| ||||||||||||| |||||    
T  44032099 aaaataaagtcaaattgttttcatataagctataaactattttcttaagttatcttgaagagcttatggaaatt 44032026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 272
Target Start/End: Complemental strand, 4019731 - 4019620
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 259  Q
    ||||| || |||||||||||| |||||||||  | ||| ||||  ||||||||   ||||||| ||| |||||||||| |||||||| |||| ||||| |    
T  4019731 tataaatgtttatgaataagtaatttctatacaaatgataaaatcaagtcaaatagttttcatgtaagctataagctg-tttcataagctattctgaata 4019633  T
Q  260 gcttatgaaaatt 272  Q
    | ||||| |||||    
T  4019632 gtttatggaaatt 4019620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 5592765 - 5592713
Alignment:
Q  219 tcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||| ||||||| ||||||||||| |||  || ||||||||||||||||    
T  5592765 tcatataagctataagttgttttcataagctagtcttaagagcttatgaaaat 5592713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 6074449 - 6074509
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctta 264  Q
    ||||| ||||| ||||||||||| |||| || ||||||| ||| ||| |||||||||||||    
T  6074449 aaagttaaactgttttcatataagctatgagttgttttcttaagctagcctgaagagctta 6074509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 8130411 - 8130459
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatc 252  Q
    ||||||||||| |||||| |||| ||||||| ||||||||||| |||||    
T  8130411 aaagtcaaactgttttcacataagctataagttgttttcataagctatc 8130459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 9656620 - 9656676
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctg 255  Q
    |||| ||||| ||| | ||||||||||| ||||||||||| ||||||| ||||||||    
T  9656620 aaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctg 9656676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 15360827 - 15360899
Alignment:
Q  163 aagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataag 234  Q
    ||||| ||||| || ||||||||||||||||   || |||| ||||||||||| ||||||||||| |||||||    
T  15360827 aagtgtttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataag 15360899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 310
Target Start/End: Complemental strand, 36151605 - 36151496
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 298  Q
    |||| ||||||||| | ||||| |||||  |||||  ||||||| ||||| |||||   |||||||||||||  ||||  |||||||| ||| |||||||    
T  36151605 aaaataaagtcaaattgttttcgtataagttataaattgttttcgtaaacaatcctagtgagcttatgaaaa--taagttgaaaacaggttatggacatg 36151508  T
Q  299 tcataaattgtt 310  Q
    ||||||| ||||    
T  36151507 tcataaactgtt 36151496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 37818395 - 37818427
Alignment:
Q  161 ataagtgcttatgaataagttatttctataaca 193  Q
    ||||||||||||| |||||||||||||||||||    
T  37818395 ataagtgcttatgtataagttatttctataaca 37818427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 39348047 - 39347995
Alignment:
Q  219 tcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||| || ||||||| |||||||||||||||||||| | |||||||| ||||    
T  39348047 tcatacaagctataagttgttttcataaactatcctgcaaagcttatggaaat 39347995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 43332486 - 43332526
Alignment:
Q  231 taagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||||||||| ||||| |||||||||||| |||||    
T  43332486 taagctgttttcataagctatcttgaagagcttattaaaat 43332526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 52286608 - 52286720
Alignment:
Q  160 tataagtgcttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 258  Q
    |||||| ||||||||||||| |||||||| ||| |  || |||| ||||| ||||  ||||||||||| |||||| || |||||||||   ||| |||||    
T  52286608 tataagcgcttatgaataagatatttctacaacaaaagataaaataaagttaaacaattttcatataagctataaactattttcataagtcatcttgaag 52286707  T
Q  259 agcttatgaaaat 271  Q
    || ||||| ||||    
T  52286708 agtttatggaaat 52286720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 27508 - 27599
Alignment:
Q  162 taagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatc 252  Q
    |||||||||||| |||||||||||||||||||   || |||| ||||||||| | ||||||||||| ||||||| |||||||||||||||||    
T  27508 taagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatc 27599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 7e-16; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 160 - 266
Target Start/End: Complemental strand, 28803646 - 28803539
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 258  Q
    |||||||||||||  |||||||||||| ||||||   || |||| |||||||||||  |||||||||| ||| ||| ||||||| |||||||||||| ||    
T  28803646 tataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagttgttttcttaaactatcctggag 28803547  T
Q  259 agcttatg 266  Q
    ||||||||    
T  28803546 agcttatg 28803539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 304
Target Start/End: Original strand, 33256710 - 33256813
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 298  Q
    |||| ||||||||||| ||||||||||| |||||||| |||||||||| | |||||||||| | ||||||||  ||||  || ||||||||| | |||||    
T  33256710 aaaataaagtcaaactgttttcatataaactataagcagttttcataagccatcctgaagaccgtatgaaaa--taagctgagaacagtttatgaacatg 33256807  T
Q  299 tcataa 304  Q
    ||||||    
T  33256808 tcataa 33256813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 10143103 - 10143209
Alignment:
Q  161 ataagtgcttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 259  Q
    ||||||||||||| |||||||||||||||||| |  || ||||  |||||||||| |||| |||||| ||||||| | ||||||||| ||||| || |||    
T  10143103 ataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatcatggaga 10143202  T
Q  260 gcttatg 266  Q
    | |||||    
T  10143203 gtttatg 10143209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 204 - 313
Target Start/End: Original strand, 43141846 - 43141953
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 303  Q
    ||||||||| | ||| ||||||| ||||||| ||||||||||| ||||||||||||| ||||| |||  ||| | |||||||  ||| || |||||||||    
T  43141846 aaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaa--taaaatgaaaacaacttatgggcatgtcata 43141943  T
Q  304 aattgtttcc 313  Q
    | ||||||||    
T  43141944 agttgtttcc 43141953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 3235522 - 3235412
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacat-tgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 258  Q
    |||||||||||||| || || ||||| |||||||  ||| |||| ||||||||||| ||| ||||||| |||||||||||||||||| |||||| ||||     
T  3235522 tataagtgcttatgtattagctatttttataacaaatga-aaaataaagtcaaactgttt-catataaactataagctgttttcatatactatcttgaaa 3235425  T
Q  259 agcttatgaaaat 271  Q
    || ||||| ||||    
T  3235424 agtttatggaaat 3235412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 17952841 - 17952745
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctg 255  Q
    |||||| ||||||  ||||| |||||||||||||   || |||| ||||||||||| ||||||||||| ||| ||| ||||||||||| ||||||||    
T  17952841 tataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagctatcctg 17952745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 315
Target Start/End: Original strand, 43205284 - 43205393
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 303  Q
    |||| |||||| |||||||||||  ||||| |||||||||||| |||||  | |||||||||| |||  ||||  ||||||||||| ||||||||| |||    
T  43205284 aaagccaaactgttttcatataagatataatctgttttcataagctatcacggagagcttatggaaa--taagttgaaaacagtttgcggacatgttata 43205381  T
Q  304 aattgtttccat 315  Q
      ||||||||||    
T  43205382 tgttgtttccat 43205393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 9395117 - 9395172
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||||||||||||||||||||| |  ||| ||| |||||||||||||||    
T  9395117 ttttcatataatctataagctgttttcattagttattctgtagagcttatgaaaat 9395172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 15377752 - 15377807
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||||  |||||||||||||||||| |||| |||| ||||||||||||||    
T  15377752 ttttcatataagttataagctgttttcataagctattctgaggagcttatgaaaat 15377807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 39983329 - 39983384
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||| ||||||| ||||||||||| |||||||| |||||| ||||||||    
T  39983329 ttttcatataagctataagttgttttcataagctatcctggagagctaatgaaaat 39983384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 41817099 - 41817210
Alignment:
Q  161 ataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 259  Q
    |||| |||||||||||||| |||||||||||||   || |||  |||  |||||| ||||  |||||| | |||||| |||||||||||||||||| |||    
T  41817099 ataaatgcttatgaataagctatttctataacacaagagaaattaaaagcaaactatttttgtataatgtgtaagctattttcataaactatcctggaga 41817198  T
Q  260 gcttatgaaaat 271  Q
    ||||||| ||||    
T  41817199 gcttatggaaat 41817210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 310
Target Start/End: Complemental strand, 1939457 - 1939323
Alignment:
Q  175 ataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatata-atctataagctgttttcataaactatcctgaagagcttatgaaaatt 272  Q
    |||||||||||||||||||   || |||| ||||| ||||| |||||||||  | |||||| |||||||||||| |||| ||| |||||||||| |||      
T  1939457 ataagttatttctataacaaaagataaaataaagtgaaactattttcatattgagctataa-ctgttttcataagctatactggagagcttatggaaa-- 1939361  T
Q  273 taagaagaaaacagtttacggacatgtcataaattgtt 310  Q
    ||||  |||||||| ||| ||||||||||||| |||||    
T  1939360 taagttgaaaacagcttatggacatgtcataagttgtt 1939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 4026817 - 4026859
Alignment:
Q  229 tataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||||||||||| ||||||||||| |||||||||||    
T  4026817 tataagctgttttcataaattatcctgaagaacttatgaaaat 4026859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 13736387 - 13736321
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||| |||||| || | ||||||||||||||||||| |||| ||  |||||||||||||||    
T  13736387 aagtcaaactattttcacatcagctataagctgttttcataagctatactagagagcttatgaaaat 13736321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 44644278 - 44644320
Alignment:
Q  229 tataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  44644278 tataagctgttttcaaaaactatcttgaagagcttatgaaaat 44644320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 6561340 - 6561397
Alignment:
Q  208 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 265  Q
    ||||||||||||||||||| |||||||  ||||||| || |||||||| |||||||||    
T  6561340 tcaaacttttttcatataacctataagaagttttcagaagctatcctggagagcttat 6561397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 311
Target Start/End: Original strand, 9478229 - 9478379
Alignment:
Q  160 tataagtgcttatgaataagttatttctataaca-ttgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 258  Q
    |||||||| ||||| ||||| ||||||||||||| | || |||| ||| ||||| | ||||||||||| ||||| ||||| ||| ||| ||||| || ||    
T  9478229 tataagtgtttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataagctatatgctgtgttcgtaagctatcgtggag 9478328  T
Q  259 agcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgttt 311  Q
    || | ||| ||   ||||| |||||||| ||| |||||||| |||| ||||||    
T  9478329 agttgatggaa--gtaagatgaaaacagcttatggacatgtaataagttgttt 9478379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 10884594 - 10884549
Alignment:
Q  226 atctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||    
T  10884594 atctataagctgttttcataagctatcctagagagcttatgaaaat 10884549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 15780064 - 15780113
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttat 265  Q
    ||||||||||||||||||| ||||||||||| ||||| || |||||||||    
T  15780064 ttttcatataatctataagttgttttcataagctatcgtgcagagcttat 15780113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 36415790 - 36415701
Alignment:
Q  183 tttctataaca-ttgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||| |||| |||| |||||||||| ||||||||  |  ||||||||||||||||||| ||||| || ||| |||| ||||||    
T  36415790 tttctataacaattgataaaataaagtcaaacatttttcattgatgctataagctgttttcataagctatcatgtagaacttacgaaaat 36415701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 39621890 - 39621968
Alignment:
Q  167 gcttatgaataagttatttctataacattgac-aaaagaaagtcaaacttttttcatataatctataagctgttttcataa 246  Q
    ||||||||||||| |||||||||||||   |  |||| |||||||||||||||   |||||||||||||||||||||||||    
T  39621890 gcttatgaataagatatttctataacacaaaataaaataaagtcaaactttttg--tataatctataagctgttttcataa 39621968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 11344424 - 11344340
Alignment:
Q  160 tataagtgcttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttca 243  Q
    |||||||||||||| ||||| |||||||||||| |  || |||||||||||||| | |||||||| || ||||||  ||||||||    
T  11344424 tataagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaaattgttttcatacaagctataaattgttttca 11344340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 13630421 - 13630313
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 258  Q
    |||| ||||||||| ||||||||||||| || ||   || || | ||||||||||| ||||||||||||| ||||| ||||||| ||| |||||||  ||    
T  13630421 tataggtgcttatgtataagttatttctctatcaaaagataagataaagtcaaactgttttcatataatcaataagttgttttcctaatctatccttgag 13630322  T
Q  259 agcttatga 267  Q
    || ||||||    
T  13630321 agtttatga 13630313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 13866865 - 13866917
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaa 257  Q
    |||||||||| |||| |||||||||||||||| ||||||| | ||||||||||    
T  13866865 aagtcaaactgtttttatataatctataagctcttttcattagctatcctgaa 13866917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 22681285 - 22681213
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| |||| |||| | ||||||||||| ||||||||||||||||||| |||||||  ||| |||||| ||||    
T  22681285 aaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaat 22681213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 315
Target Start/End: Complemental strand, 1742126 - 1742018
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 304  Q
    |||||||||| |||  ||||||  |||||||||||||||||| ||||| ||||||| ||||| |||  ||||  ||| | || ||| | |||||||||||    
T  1742126 aagtcaaactctttatatataagatataagctgttttcataatctatcatgaagagtttatggaaa--taagttgaagatagcttatgcacatgtcataa 1742029  T
Q  305 attgtttccat 315  Q
     ||||||||||    
T  1742028 gttgtttccat 1742018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 3102663 - 3102710
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataa 246  Q
    |||| ||||||||||| |||| ||||||||||| ||||||||||||||    
T  3102663 aaaataaagtcaaactatttttatataatctattagctgttttcataa 3102710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 16353837 - 16353903
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||||||| |||||||| |||||||||||||| |||| ||||| || ||| ||| |||||||    
T  16353837 aaagtcaaactttt-tcatataagctataagctgtttttataagctatcttggagatcttgtgaaaat 16353903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 18066115 - 18066170
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||| ||||||||||||||||||| ||||| || ||| |||| ||||||    
T  18066115 ttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaat 18066170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 271
Target Start/End: Complemental strand, 18179323 - 18179268
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||| |||||||||| |||||||| |||||||| ||| |||| ||||||    
T  18179323 ttttcatataagctataagctgctttcataagctatcctggagaacttacgaaaat 18179268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 25800816 - 25800859
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaaga 259  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||||    
T  25800816 ttttcatataagctataagctgttttcataagctatcttgaaga 25800859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 309
Target Start/End: Original strand, 33942120 - 33942228
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 298  Q
    |||| ||||||||||| ||||||| ||| ||||||| ||||||||||| | ||| |  |||||| |||||||||  ||  |||||||| ||| | |||||    
T  33942120 aaaataaagtcaaactgttttcatgtaagctataagttgttttcataagccatcatagagagctaatgaaaatt--agctgaaaacagcttatgaacatg 33942217  T
Q  299 tcataaattgt 309  Q
    |||||| ||||    
T  33942218 tcataagttgt 33942228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 35486458 - 35486391
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||| ||||  |||||||||||||||||||||  || |||||||| |||| ||||| ||||    
T  35486458 aaagtcaaactgtttttgtataatctataagctgttttcgcaagctatcctggagaggttatggaaat 35486391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 271
Target Start/End: Complemental strand, 43985086 - 43985031
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||| |||||  |||||| ||||||||||| ||||| ||||||||||||||||||    
T  43985086 ttttcgtataaattataagttgttttcataagctatcttgaagagcttatgaaaat 43985031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 3049974 - 3050016
Alignment:
Q  229 tataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||||||||||| ||||| || |||||||||||||||    
T  3049974 tataagctgttttcataagctatcatggagagcttatgaaaat 3050016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 5043660 - 5043590
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaa 269  Q
    |||| ||||||||||| ||||||||||| ||| ||| ||||||||||| ||||| || | |||| ||||||    
T  5043660 aaaataaagtcaaactgttttcatataagctagaagttgttttcataagctatcatggatagctaatgaaa 5043590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 25790102 - 25790168
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||| ||||||||||| ||| ||  |||||  |||| |||||||| |||||||||||||||    
T  25790102 aagtcaaactgttttcatataagctacaaattgtttggataatctatcctggagagcttatgaaaat 25790168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 252
Target Start/End: Original strand, 11513868 - 11513921
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatc 252  Q
    |||| ||||||||| | ||||||||||| ||||||| ||||||||||| |||||    
T  11513868 aaaataaagtcaaattgttttcatataagctataagttgttttcataagctatc 11513921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 42419990 - 42420039
Alignment:
Q  222 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||||||| ||||||||| |||||||| | |||||||| ||||    
T  42419990 tataatctataagctattttcataagctatcctggatagcttatggaaat 42420039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 42817470 - 42817409
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 266  Q
    ||||||| || |||||||||||   |||| |||||||||||| |||| ||||||||||||||    
T  42817470 aagtcaagctgttttcatataagtaataaactgttttcataagctattctgaagagcttatg 42817409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 8017404 - 8017476
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||| ||| | ||||||||||| || ||| |||||||||||| ||||| || ||| |||||||||||    
T  8017404 aaaacaaagttaaattattttcatataagctgtaaactgttttcataagctatcttggagaacttatgaaaat 8017476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 9556209 - 9556281
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||  | |||||||| || |||||| |||||||||||| |||||||  | |||||||||||||    
T  9556209 aaaataaagtcaacgtgttttcatacaagctataaactgttttcataagctatcctagaaagcttatgaaaat 9556281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 315
Target Start/End: Complemental strand, 11344792 - 11344756
Alignment:
Q  279 gaaaacagtttacggacatgtcataaattgtttccat 315  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  11344792 gaaaacagtttatggacatgtcataagttgtttccat 11344756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 13869195 - 13869123
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||| | ||||| | ||||||| ||| |||||||||||||||||||  ||||||| ||| || ||||||||    
T  13869195 aaaagacattcaaattattttcatctaagctataagctgttttcataagttatcctggagaactaatgaaaat 13869123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 26626847 - 26626915
Alignment:
Q  203 gaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||| ||| | ||||| ||||| ||| ||||||||||||||| ||||| || ||| |||||||||||    
T  26626847 gaaagttaaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaat 26626915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 30552732 - 30552672
Alignment:
Q  211 aacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||||||| | ||||||  | |||||||||||||||||  |||||||||| ||||    
T  30552732 aacttttttcatatcagctataaattattttcataaactatcctagagagcttatggaaat 30552672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 34055040 - 34054936
Alignment:
Q  161 ataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 259  Q
    ||||||||||||| ||| | |||||||||||||   || |||| |||| |||||| ||| ||||||   |||||| ||||||||||| |||||||  |||    
T  34055040 ataagtgcttatgtataggctatttctataacaaaagataaaataaaggcaaactgtttacatatatgatataaggtgttttcataagctatcctataga 34054941  T
Q  260 gctta 264  Q
    |||||    
T  34054940 gctta 34054936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 35485887 - 35485959
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||||| |||   ||||| ||||||| |||||| |||| |||||||||||||| |||| ||||    
T  35485887 aaaataaagtcaaactatttcattataagctataagttgtttttataagctatcctgaagagcctatggaaat 35485959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 36863725 - 36863653
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||||  |||| ||||||  |||||  ||||||||||| ||||| || |||||||||||||||    
T  36863725 aaaataaagtcaaacaatttttatataagttataaattgttttcataagctatcttggagagcttatgaaaat 36863653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 37276722 - 37276778
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagc 261  Q
    |||||||||| |||||||||||  |||||| |||||||||||  ||||||| |||||    
T  37276722 aagtcaaactgttttcatataagttataagttgttttcataagttatcctggagagc 37276778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 37292447 - 37292379
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatga 267  Q
    |||| ||||| ||||| ||||||||||| |||| || ||||||| ||| |||||||| |||| ||||||    
T  37292447 aaaataaagtaaaactattttcatataagctattagttgttttcttaagctatcctggagagtttatga 37292379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 21157743 - 21157810
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||| ||||||| ||| ||||||| ||||||||||  ||||||||||||||||||| ||||    
T  21157743 aaagtcaaactgttttcatgtaagctataagatgttttcatatgctatcctgaagagcttatggaaat 21157810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 163 - 304
Target Start/End: Original strand, 23819023 - 23819162
Alignment:
Q  163 aagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagct 262  Q
    ||||| ||||| |||||||||||| ||||||   | ||||   ||||||||| |||||||||||  |||||  ||||||||||| ||||| |||||||||    
T  23819023 aagtgtttatgtataagttatttccataacaaatataaaatgtagtcaaactgttttcatataagttataacatgttttcataagctatcttgaagagct 23819122  T
Q  263 tatgaaaatttaagaagaaaacagtttacggacatgtcataa 304  Q
    |||  |||  ||||| |||||||  ||| |||||||||||||    
T  23819123 tatagaaa--taagatgaaaacaacttatggacatgtcataa 23819162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 271
Target Start/End: Original strand, 49219084 - 49219181
Alignment:
Q  175 ataagttatttctataacattg-acaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||||||||||||    | |||| ||||||||| | ||||||||||| ||||||| ||||||||||||||||| | ||||| ||||| ||||    
T  49219084 ataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagattatggaaat 49219181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 311
Target Start/End: Original strand, 2996508 - 2996653
Alignment:
Q  165 gtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 263  Q
    ||||||||||||||| || ||| |||||||  || |||| | ||||||| | |||| ||||||  |||||| ||||||||||| ||||| || ||||| |    
T  2996508 gtgcttatgaataagctacttcgataacataagataaaatacagtcaaattgtttttatataagttataagttgttttcataagctatcttggagagcgt 2996607  T
Q  264 atgaaaatttaagaagaaaacagtttacggacatgtcataaattgttt 311  Q
    |||||||  ||||  ||||| || ||| ||||||||||||| ||||||    
T  2996608 atgaaaa--taagttgaaaaaagcttatggacatgtcataagttgttt 2996653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 272
Target Start/End: Original strand, 44319880 - 44319992
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 259  Q
    |||||||||| ||| ||||  ||||||||||| |  || |||| |||||| |||| ||||||||||| ||| ||||| |||| |||| |||||||  |||    
T  44319880 tataagtgctcatgtataaactatttctataaaaaagataaaataaagtcgaactgttttcatataagctacaagctattttgataagctatcctagaga 44319979  T
Q  260 gcttatgaaaatt 272  Q
     ||||||||||||    
T  44319980 acttatgaaaatt 44319992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 17883584 - 17883546
Alignment:
Q  208 tcaaacttttttcatataatctataagctgttttcataa 246  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  17883584 tcaaacttttttcgtataatctataagctgttttcataa 17883546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 47800623 - 47800665
Alignment:
Q  229 tataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  47800623 tataagctgttttcataagctatcttgaagagcttatgaaaat 47800665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 56480348 - 56480390
Alignment:
Q  229 tataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  56480348 tataagctgttttcataaactatcttggagagcttatgaaaat 56480390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 35958594 - 35958691
Alignment:
Q  169 ttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 265  Q
    ||||| ||||| ||||||||||||||  |  |||| ||||||||| || ||| |||||| ||| ||||||||||||||| |||||||| |||| ||||    
T  35958594 ttatgtataagctatttctataacataagttaaaataaagtcaaatttgttttatataagctagaagctgttttcataagctatcctggagagtttat 35958691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 12650355 - 12650311
Alignment:
Q  228 ctataagctgttttcataaactatcctgaagagcttatgaaaatt 272  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||    
T  12650355 ctataagctgttttcataacctatcctggagagcttatggaaatt 12650311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 303
Target Start/End: Complemental strand, 30207710 - 30207569
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 259  Q
    |||||||||||||| ||| |||| ||||||||||   |  |||  || ||||||| ||||||||||| ||||||| ||||||||||| ||| | |  |||    
T  30207710 tataagtgcttatgtatatgttagttctataacaaaaaataaaataaatcaaactgttttcatataagctataagttgttttcataagctaccttagaga 30207611  T
Q  260 gcttatgaaaatttaagaagaaaacagtttacggacatgtcata 303  Q
    | ||||| |||  ||||  |||||||| |||| |||||||||||    
T  30207610 gattatggaaa--taagctgaaaacagcttacagacatgtcata 30207569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 36722757 - 36722697
Alignment:
Q  211 aacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| |||||||||||  |||||| |||||| ||||  |||||||||||||||||||||||    
T  36722757 aactgttttcatataagttataagttgttttgataagttatcctgaagagcttatgaaaat 36722697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 1706621 - 1706664
Alignment:
Q  228 ctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||||||||||||||||| || | |||||||||||||    
T  1706621 ctataagctgttttcataaactatcttggacagcttatgaaaat 1706664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 10365753 - 10365788
Alignment:
Q  210 aaacttttttcatataatctataagctgttttcata 245  Q
    ||||||||||||||||| ||||||||||||||||||    
T  10365753 aaacttttttcatataaactataagctgttttcata 10365788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 29778782 - 29778837
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||| || |||| ||||||||||| ||| | ||||||||||||||||||    
T  29778782 ttttcatataagctgtaagttgttttcataagctaccttgaagagcttatgaaaat 29778837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 35507402 - 35507355
Alignment:
Q  222 tataatctataagctgttttcataaactatcctgaagagcttatgaaa 269  Q
    ||||| ||||||| |||||||||| |||||||| ||||||||||||||    
T  35507402 tataagctataagttgttttcatacactatcctaaagagcttatgaaa 35507355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 35507534 - 35507487
Alignment:
Q  222 tataatctataagctgttttcataaactatcctgaagagcttatgaaa 269  Q
    ||||| ||||||| |||||||||| |||||||| ||||||||||||||    
T  35507534 tataagctataagttgttttcatacactatcctaaagagcttatgaaa 35507487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 53315305 - 53315368
Alignment:
Q  208 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||| ||||||||||| |||||||||||| ||| |||| | |||  |||||||||||||||    
T  53315305 tcaaactattttcatataagctataagctgttctcaaaaacaaacctagagagcttatgaaaat 53315368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 54325137 - 54325070
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 266  Q
    |||| ||||||||||| ||||||||||| ||||||||| |||||| || ||||| || |||| |||||    
T  54325137 aaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagtttatg 54325070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 7694104 - 7694038
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||| ||||  ||||| |||||||||||||||||||  ||||||| |||| ||||| ||||    
T  7694104 aagtcaaactgtttttgtataagctataagctgttttcataagttatcctggagagtttatggaaat 7694038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 25309233 - 25309283
Alignment:
Q  221 atataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||| ||| || |||||||| |||||||||||| |||||||||||||||    
T  25309233 atataaactacaaactgttttcgtaaactatcctgcagagcttatgaaaat 25309283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 242
Target Start/End: Complemental strand, 42322018 - 42321936
Alignment:
Q  161 ataagtgcttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttc 242  Q
    ||||||| ||||||||||| ||||| |||||| | ||| |||| ||||||||| | |||||||||||  |||||| |||||||    
T  42322018 ataagtgtttatgaataagctatttttataacaaatgataaaataaagtcaaattgttttcatataaattataagttgttttc 42321936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 42866047 - 42866105
Alignment:
Q  208 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 266  Q
    ||||||| |||| |||||| ||||||| ||||||||||| |||||||  ||||||||||    
T  42866047 tcaaactgtttttatataagctataagttgttttcataagctatccttgagagcttatg 42866105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 3155606 - 3155664
Alignment:
Q  232 aagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacg 292  Q
    ||||||||||||||||||||| |||||| || |||||||  ||||  ||||||||||||||    
T  3155606 aagctgttttcataaactatcttgaagaactaatgaaaa--taagctgaaaacagtttacg 3155664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 265
Target Start/End: Original strand, 3891507 - 3891611
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 259  Q
    |||||||||||||||||||  |||||||||||||  || |||| |||||| |||  ||||  |||||| | |||| |||||| |||| |||||||  |||    
T  3891507 tataagtgcttatgaataaactatttctataaca-ggataaaataaagtcgaaccgtttttgtataatatgtaagttgtttttataagctatcctagaga 3891605  T
Q  260 gcttat 265  Q
    ||||||    
T  3891606 gcttat 3891611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 4663836 - 4663803
Alignment:
Q  160 tataagtgcttatgaataagttatttctataaca 193  Q
    |||||||||||||| |||||||||||||||||||    
T  4663836 tataagtgcttatgtataagttatttctataaca 4663803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 315
Target Start/End: Original strand, 24929463 - 24929577
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 298  Q
    |||| |||||| |||| |||||||| || ||||||| |||||||||||||| | ||  |||||||||| |||  ||||  ||||||| |||| | |||||    
T  24929463 aaaataaagtctaactgttttcataaaagctataagttgttttcataaactctactagagagcttatggaaa--taagctgaaaacaatttatgaacatg 24929560  T
Q  299 tcataaattgtttccat 315  Q
     |||||  |||||||||    
T  24929561 ccataagctgtttccat 24929577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 40008546 - 40008579
Alignment:
Q  238 ttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||||||||||||||||||||| |||||    
T  40008546 ttttcataaactatcctgaagagcttataaaaat 40008579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 41097337 - 41097296
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataa 246  Q
    |||||||||| ||||||||| | |||||||||||||||||||    
T  41097337 aagtcaaactgttttcatattacctataagctgttttcataa 41097296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 1137706 - 1137754
Alignment:
Q  223 ataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||||||| |||||||||||||||   |||||||||| ||||    
T  1137706 ataatctataagctgctttcataaactatccaagagagcttatggaaat 1137754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 3175921 - 3175985
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 263  Q
    |||| ||||||||| | ||||||  |||  |||||||||||||||||| ||||||||||| ||||    
T  3175921 aaaataaagtcaaattgttttcaagtaagttataagctgttttcataagctatcctgaagggctt 3175985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 11264301 - 11264374
Alignment:
Q  229 tataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 304  Q
    |||||| ||||||||||| | |||||  |||||||||| ||||  |||  |||||||||||| |||||||||||||    
T  11264301 tataagttgttttcataagccatcctagagagcttatggaaat--aagttgaaaacagtttatggacatgtcataa 11264374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 16200081 - 16200009
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||| ||||||| ||||  ||||  ||||||||||||||||||| ||||| || ||  |||||||||||    
T  16200081 aaaagaaaatcaaactgtttttgtatatgctataagctgttttcataagctatcttggaggacttatgaaaat 16200009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 271
Target Start/End: Complemental strand, 21043299 - 21043263
Alignment:
Q  235 ctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||||| |||||||||||||| |||||||||    
T  21043299 ctgttttcataagctatcctgaagagcatatgaaaat 21043263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 175 - 265
Target Start/End: Complemental strand, 6509426 - 6509337
Alignment:
Q  175 ataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 265  Q
    ||||||||| |||||||||  || |||| ||||||||| | | || |||||| ||||||||||||||||||| |||||||| |||||||||    
T  6509426 ataagttatatctataacaa-gataaaataaagtcaaattgtatttatataagctataagctgttttcataagctatcctggagagcttat 6509337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 10075646 - 10075579
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||| |||| ||||||  |||||||| ||||||||| |||||||  |||||||||||||||    
T  10075646 aaagtcaaactatttttatataagttataagctattttcataagctatcctagagagcttatgaaaat 10075579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 39389271 - 39389204
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||||||| |||||||||  |||| |||| ||| |||||| ||||| |||||||||||||||||    
T  39389271 aaagtcaaacttctttcatataggctatcagctatttccataaattatccagaagagcttatgaaaat 39389204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 4763849 - 4763955
Alignment:
Q  161 ataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 259  Q
    ||||||| ||||| |||||||||||| | ||||   || |||| ||| ||||||  |||||| |||| ||||||||||||||  ||| ||||||||||||    
T  4763849 ataagtgtttatgcataagttatttcgacaacaaaagataaaataaattcaaaccgttttcacataagctataagctgtttttctaagctatcctgaaga 4763948  T
Q  260 gcttatg 266  Q
    |||||||    
T  4763949 gcttatg 4763955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 30013194 - 30013244
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctg 255  Q
    |||||||||| ||| ||||||| ||||||||||||||||||| ||||||||    
T  30013194 aagtcaaactgtttccatataagctataagctgttttcataagctatcctg 30013244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 271
Target Start/End: Complemental strand, 34522195 - 34522082
Alignment:
Q  161 ataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaact--tttttcatataatctataagctgttttcataaactatcctgaa 257  Q
    ||||| ||||||||||||| ||||||||| |||   || |||| |||||||||||  |||||  ||||||||| ||| | |||||| || ||||||| ||    
T  34522195 ataagcgcttatgaataagctatttctatgacacaagataaaataaagtcaaactactttttagtataatctaaaaggtattttcaaaagctatcctaaa 34522096  T
Q  258 gagcttatgaaaat 271  Q
    ||||||||||||||    
T  34522095 gagcttatgaaaat 34522082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 315
Target Start/End: Complemental strand, 41620428 - 41620277
Alignment:
Q  163 aagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagc 261  Q
    ||||||||||  ||||||||||| | |||||   || |||| ||||||||| | | |||||||| |||| |||||||||| |||| ||||| ||  ||||    
T  41620428 aagtgcttatatataagttatttttgtaacaaaagataaaataaagtcaaattatgttcatatattctaaaagctgtttttataagctatcttgtcgagc 41620329  T
Q  262 ttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttccat 315  Q
    || |||||||  |||  |||||||  ||| ||||||||||||| ||||||||||    
T  41620328 ttttgaaaat--aagcggaaaacaacttatggacatgtcataatttgtttccat 41620277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 304
Target Start/End: Original strand, 11795067 - 11795165
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 303  Q
    ||||||| ||| |||||||||||  ||||||||| |||||||| ||||  || |||||||||| |||  ||||  |||||||| ||| ||||||||||||    
T  11795067 aaagtcacactgttttcatataagttataagctgatttcataagctattatggagagcttatggaaa--taagctgaaaacaggttatggacatgtcata 11795164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 1470956 - 1470884
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||| |  |||||||||| ||||||||||||||||||| ||||| |||| || ||| ||||||    
T  1470956 aaaataaagtcaaattactttcatataagctataagctgttttcataacctatcatgaaaagtttaggaaaat 1470884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 304
Target Start/End: Original strand, 12361168 - 12361265
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 304  Q
    |||||||| | ||||||||||| |||||||||||||||||||  ||| | | |||||| ||| |||  ||||  |||||||| ||| |||||||||||||    
T  12361168 aagtcaaattgttttcatataagctataagctgttttcataagttattcaggagagctaatggaaa--taagttgaaaacagcttatggacatgtcataa 12361265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 25097387 - 25097427
Alignment:
Q  230 ataagctgttttcataaactatcctgaagagcttatgaaaa 270  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  25097387 ataagctgttttcataagctatcctggagagcttatgaaaa 25097427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 29973051 - 29973123
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||||| |||||| |||| ||||||| ||||||||||| |||||||  |||| ||||| ||||    
T  29973051 aaaataaagtcaaactattttcacataagctataagttgttttcataagctatccttgagagtttatggaaat 29973123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 42215406 - 42215334
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||||| ||||  |||||||||||| || ||||||||  |||||||| |||||||||| ||||    
T  42215406 aaaataaagtcaaactgtttttgtataatctataacctattttcatatgctatcctggagagcttatgtaaat 42215334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 312
Target Start/End: Complemental strand, 43704473 - 43704365
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcata--aactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtca 301  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||  |  |||||| || |||||||| |||  ||||   ||||||||||| | ||||||||    
T  43704473 aaagtcaaactgttttcatataaactataagttgttttcataagagttatcctcaaaagcttatggaaa--taagcttaaaacagtttatgaacatgtca 43704376  T
Q  302 taaattgtttc 312  Q
    ||| |||||||    
T  43704375 taagttgtttc 43704365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 5227522 - 5227577
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| |||||| ||||||||||||||  ||| ||||| ||||||||||||||||||    
T  5227522 ttttaatataagctataagctgtttttgtaagctatcatgaagagcttatgaaaat 5227577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 9836949 - 9836882
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||| |||||||||||  || || |||||||||||| ||||| || |||||||||| ||||    
T  9836949 aaagtcaaactattttcatataagttacaacctgttttcataagctatcttggagagcttatggaaat 9836882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 27028830 - 27028873
Alignment:
Q  228 ctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||||||||||| ||||| || |||||||||||||||    
T  27028830 ctataagctgttttcataagctatcttggagagcttatgaaaat 27028873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 31862468 - 31862535
Alignment:
Q  204 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||| || || ||||| ||||||| |||||||||||  ||||||  |||||||||||||||    
T  31862468 aaagtcaaactattctcgtataagctataagatgttttcataagttatcctagagagcttatgaaaat 31862535  T

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Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 315
Target Start/End: Complemental strand, 31875669 - 31875581
Alignment:
Q  225 aatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttccat 315  Q
    ||||||||||||||||   ||||||||| | |||||||||||||||  ||||  |||||  | ||| ||||||||||||| ||||||||||    
T  31875669 aatctataagctgtttctttaaactatcttcaagagcttatgaaaa--taagttgaaaatggcttatggacatgtcataagttgtttccat 31875581  T

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Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 257
Target Start/End: Original strand, 38537584 - 38537619
Alignment:
Q  222 tataatctataagctgttttcataaactatcctgaa 257  Q
    |||||||||||||||| |||||||||||||||||||    
T  38537584 tataatctataagctgctttcataaactatcctgaa 38537619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 41309772 - 41309827
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||||||| ||||||| | ||||||||| |||||||||| || ||||||||||    
T  41309772 ttttcatataaactataagatattttcataagctatcctgaaaagtttatgaaaat 41309827  T

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Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 271
Target Start/End: Original strand, 4558730 - 4558840
Alignment:
Q  162 taagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagag 260  Q
    |||||| ||||| ||||| ||||||||||| |   || |||| ||||| ||| | ||||||||||  ||||||||||||| ||||| |||||||  ||||    
T  4558730 taagtgtttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcctagagag 4558829  T
Q  261 cttatgaaaat 271  Q
    |||||| ||||    
T  4558830 cttatggaaat 4558840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 28769433 - 28769387
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactat 251  Q
    |||||||||| ||||| ||||| ||||||||||||||||||| ||||    
T  28769433 aagtcaaactattttcttataagctataagctgttttcataagctat 28769387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 39551290 - 39551195
Alignment:
Q  218 ttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttccat 315  Q
    |||||| || ||||||| ||||||||||| || ||||| ||||||||| ||||  ||||   ||||||| ||  ||||||||||||| ||||||||||    
T  39551290 ttcatacaagctataagttgttttcataagctttcctggagagcttataaaaa--taagttaaaaacagcttttggacatgtcataagttgtttccat 39551195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 42764248 - 42764302
Alignment:
Q  210 aaacttttttcatataatctataagctgttttcataaactatcctgaagagctta 264  Q
    ||||| |||||||| || ||||||||| |||||||||  ||||||||||||||||    
T  42764248 aaactgttttcatacaagctataagctattttcataagttatcctgaagagctta 42764302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 1433525 - 1433590
Alignment:
Q  206 agtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| |||| |||| || ||| || ||||| |||||||||| |||||||| |||||||||||||||    
T  1433525 agtcgaactatttttatttaagctttaagcagttttcataagctatcctggagagcttatgaaaat 1433590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 264
Target Start/End: Original strand, 4390143 - 4390248
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 258  Q
    |||||| ||||| | |||||||||||| || |||   ||||||| | ||||||||| ||||   |||||||||||||| ||||||||| || ||| ||||    
T  4390143 tataagcgcttacggataagttatttcaatcacagaagacaaaacacagtcaaactgtttttgcataatctataagctattttcataagctctccagaag 4390242  T
Q  259 agctta 264  Q
    ||||||    
T  4390243 agctta 4390248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 9562344 - 9562291
Alignment:
Q  218 ttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    ||||||| | ||||||| | |||||||||||||||||||| |||| ||||||||    
T  9562344 ttcatatcaactataagatattttcataaactatcctgaaaagctcatgaaaat 9562291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 311
Target Start/End: Original strand, 11183515 - 11183625
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 298  Q
    |||| ||||||||||| |  |||||| | |||||||||||||||| || ||| |||| |||||||||| |||  ||||  |||||||| |||  |||||     
T  11183515 aaaacaaagtcaaactgtcctcatattagctataagctgttttcacaagctaccctggagagcttatggaaa--taagctgaaaacagcttatagacata 11183612  T
Q  299 tcataaattgttt 311  Q
    |||||| ||||||    
T  11183613 tcataagttgttt 11183625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 40014960 - 40014919
Alignment:
Q  228 ctataagctgttttcataaactatcctgaagagcttatgaaa 269  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||    
T  40014960 ctataagatgttttcataagctatcttgaagagcttatgaaa 40014919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 42476035 - 42476068
Alignment:
Q  160 tataagtgcttatgaataagttatttctataaca 193  Q
    |||||||||||||||||||||||||||| |||||    
T  42476035 tataagtgcttatgaataagttatttctgtaaca 42476068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 271
Target Start/End: Original strand, 1470029 - 1470061
Alignment:
Q  239 tttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||||| ||||||||||||||||||||||||    
T  1470029 tttcataatctatcctgaagagcttatgaaaat 1470061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 8062494 - 8062566
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||||||||| | ||||||||||| ||||||| |||| |||||| ||||| |  |||| ||||||||||    
T  8062494 aaaaaaaagtcaaattgttttcatataagctataagatgttctcataagctatcttagagagtttatgaaaat 8062566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 10383855 - 10383927
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| ||| |||| || ||||| ||||||||||| ||||||||| ||||||||| |  |||||||||| ||||    
T  10383855 aaaataaaatcaagctgttttcgtataatctatatgctgttttcgtaaactatcatatagagcttatggaaat 10383927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 252
Target Start/End: Original strand, 26717187 - 26717278
Alignment:
Q  160 tataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatc 252  Q
    ||||||||||| |||||||| || || |||||||  || |||| ||||||||||| |||||| |||| | | | ||||||||||||| |||||    
T  26717187 tataagtgcttctgaataagctaattttataacaa-gataaaataaagtcaaactattttcaaataagcaaaaggctgttttcataatctatc 26717278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 26820144 - 26820216
Alignment:
Q  175 ataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataa 246  Q
    |||||||||||||||||||   || |||| ||||||||||| ||||  ||||| |||||||| ||||||||||    
T  26820144 ataagttatttctataacaaaagataaaataaagtcaaactattttgttataaactataagccgttttcataa 26820216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 30043828 - 30043784
Alignment:
Q  217 tttcatataatctataagctgttttcataaactatcctgaagagc 261  Q
    |||||||||  ||||||||||||||||||| |||| |||||||||    
T  30043828 tttcatatatgctataagctgttttcataagctatactgaagagc 30043784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 32143139 - 32143087
Alignment:
Q  205 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaa 257  Q
    |||||||||| |||| ||| ||  ||||||| |||||||||||||||||||||    
T  32143139 aagtcaaactgtttttatacaagttataagcggttttcataaactatcctgaa 32143087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 33209320 - 33209248
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| |||||| |||| ||||||||||| ||||||||| |||| |||| |||| | | ||||||||| |||||    
T  33209320 aaaataaagtcgaactgttttcatataaactataagctatttttataagctattccggagagcttataaaaat 33209248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 12060 - 12111
Alignment:
Q  220 catataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||||| |||||||  |||||||||||||||| ||||||||||| |||||||    
T  12060 catatattctataaattgttttcataaactattctgaagagcttttgaaaat 12111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 6939 - 6994
Alignment:
Q  216 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 271  Q
    |||| |||||| ||||||||||||||  ||| ||||| ||||||||||||||||||    
T  6939 ttttaatataagctataagctgtttttgtaagctatcatgaagagcttatgaaaat 6994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 317
Target Start/End: Complemental strand, 160053 - 159957
Alignment:
Q  219 tcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttccatta 317  Q
    ||||||||  |||||| ||||||||||| ||||||| |||||||| || |||  ||||  |||||| | |||  ||||||||||||| |||||||||||    
T  160053 tcatataagttataagatgttttcataagctatcctaaagagcttgtggaaa--taagctgaaaactgcttatagacatgtcataaactgtttccatta 159957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 40230 - 40276
Alignment:
Q  228 ctataagctgttttcataaactatcctgaagagcttatgaaaattta 274  Q
    ||||||| |||||||||||  ||||||||||||||||||||| ||||    
T  40230 ctataagttgttttcataagttatcctgaagagcttatgaaagttta 40276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 2710 - 2641
Alignment:
Q  201 aagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaa 270  Q
    ||||| |||||||| ||||| | |||  ||| || ||| |||||||||||||||| ||||||||||||||    
T  2710 aagaatgtcaaactgttttcgtgtaagttatgagatgtcttcataaactatcctggagagcttatgaaaa 2641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 4323 - 4271
Alignment:
Q  199 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactat 251  Q
    |||| ||||||||||  ||||||||||| |||||||||||||| |||| ||||    
T  4323 aaaataaagtcaaaccgttttcatataaactataagctgttttaataagctat 4271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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