View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2062_high_19 (Length: 253)

Name: NF2062_high_19
Description: NF2062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2062_high_19
NF2062_high_19
[»] chr7 (68 HSPs)
chr7 (1-229)||(20343811-20344038)
chr7 (1-240)||(18388787-18389024)
chr7 (1-240)||(18392223-18392460)
chr7 (1-240)||(32060349-32060590)
chr7 (1-240)||(6592367-6592604)
chr7 (1-240)||(6594585-6594822)
chr7 (1-229)||(24789755-24789982)
chr7 (73-240)||(1562103-1562268)
chr7 (1-229)||(39731283-39731510)
chr7 (8-229)||(43504188-43504409)
chr7 (1-226)||(35853825-35854055)
chr7 (1-229)||(25766987-25767215)
chr7 (1-226)||(29990965-29991194)
chr7 (6-229)||(48408709-48408940)
chr7 (12-143)||(14069871-14070001)
chr7 (12-143)||(14379899-14380029)
chr7 (1-213)||(25615785-25615994)
chr7 (6-226)||(4178685-4178909)
chr7 (1-143)||(22269973-22270114)
chr7 (1-143)||(34310743-34310884)
chr7 (1-143)||(41317461-41317602)
chr7 (1-143)||(48491579-48491720)
chr7 (6-226)||(19502088-19502314)
chr7 (1-143)||(23555039-23555181)
chr7 (12-213)||(47673981-47674189)
chr7 (1-65)||(1560693-1560757)
chr7 (1-143)||(27347817-27347958)
chr7 (1-143)||(30024759-30024900)
chr7 (12-143)||(4586161-4586291)
chr7 (1-143)||(8359343-8359485)
chr7 (12-140)||(41649049-41649175)
chr7 (1-143)||(18126644-18126785)
chr7 (1-143)||(29608737-29608878)
chr7 (12-143)||(26417316-26417446)
chr7 (1-143)||(2360999-2361140)
chr7 (12-143)||(4253566-4253697)
chr7 (1-143)||(6431971-6432112)
chr7 (1-143)||(8153342-8153483)
chr7 (1-89)||(32358081-32358167)
chr7 (6-143)||(48599366-48599502)
chr7 (1-125)||(2390301-2390423)
chr7 (12-143)||(31733007-31733137)
chr7 (12-143)||(36146446-36146576)
chr7 (12-143)||(47676174-47676304)
chr7 (1-143)||(3258995-3259136)
chr7 (1-143)||(4508733-4508874)
chr7 (1-143)||(48489431-48489572)
chr7 (12-140)||(496021-496148)
chr7 (13-124)||(23565100-23565210)
chr7 (13-143)||(43864244-43864373)
chr7 (25-143)||(23343975-23344092)
chr7 (24-226)||(38671272-38671480)
chr7 (12-140)||(1113660-1113787)
chr7 (24-140)||(31105443-31105558)
chr7 (14-89)||(6359992-6360065)
chr7 (72-143)||(24525992-24526065)
chr7 (61-143)||(12097944-12098027)
chr7 (24-143)||(36574565-36574683)
chr7 (66-139)||(1360243-1360316)
chr7 (25-118)||(2759248-2759339)
chr7 (11-89)||(4510585-4510661)
chr7 (11-89)||(4512427-4512503)
chr7 (56-138)||(22328471-22328556)
chr7 (42-143)||(31518795-31518896)
chr7 (141-226)||(24514934-24515018)
chr7 (12-57)||(24525540-24525584)
chr7 (56-124)||(28617182-28617249)
chr7 (13-81)||(31518965-31519031)
[»] chr6 (42 HSPs)
chr6 (1-240)||(25421208-25421447)
chr6 (8-240)||(16554772-16555003)
chr6 (8-240)||(16631328-16631559)
chr6 (1-240)||(16653015-16653253)
chr6 (1-240)||(16578545-16578783)
chr6 (1-240)||(16616597-16616835)
chr6 (6-240)||(6027151-6027383)
chr6 (6-229)||(27647777-27647996)
chr6 (1-240)||(33342132-33342370)
chr6 (1-240)||(34164761-34164999)
chr6 (1-240)||(34166983-34167221)
chr6 (1-229)||(412016-412243)
chr6 (1-229)||(3072786-3073014)
chr6 (1-163)||(13153893-13154056)
chr6 (1-226)||(31404702-31404932)
chr6 (1-229)||(2171559-2171792)
chr6 (1-226)||(5406227-5406456)
chr6 (1-226)||(5410552-5410781)
chr6 (1-229)||(6097478-6097695)
chr6 (1-226)||(30834563-30834794)
chr6 (1-226)||(5413421-5413650)
chr6 (1-222)||(16452356-16452583)
chr6 (1-143)||(21588931-21589072)
chr6 (1-143)||(21593664-21593805)
chr6 (1-143)||(2972966-2973107)
chr6 (6-143)||(9183063-9183199)
chr6 (6-143)||(33160384-33160521)
chr6 (1-143)||(3808735-3808877)
chr6 (10-140)||(17758026-17758155)
chr6 (1-143)||(28137435-28137576)
chr6 (1-143)||(3038930-3039071)
chr6 (1-143)||(22424853-22424995)
chr6 (6-143)||(17762990-17763126)
chr6 (8-141)||(26830157-26830289)
chr6 (1-226)||(16568953-16569163)
chr6 (8-140)||(5043630-5043761)
chr6 (12-140)||(26954324-26954450)
chr6 (24-143)||(4045423-4045542)
chr6 (1-74)||(5409096-5409167)
chr6 (1-143)||(33211212-33211353)
chr6 (1-89)||(26800642-26800728)
chr6 (12-89)||(603126-603201)
[»] chr5 (49 HSPs)
chr5 (1-240)||(25078023-25078262)
chr5 (1-240)||(25135992-25136231)
chr5 (1-240)||(10593161-10593399)
chr5 (1-233)||(22536317-22536545)
chr5 (1-229)||(29751187-29751414)
chr5 (1-240)||(16546534-16546772)
chr5 (1-229)||(29722438-29722665)
chr5 (1-240)||(40379995-40380232)
chr5 (1-240)||(40382206-40382443)
chr5 (1-240)||(16544312-16544550)
chr5 (1-229)||(29720278-29720505)
chr5 (1-229)||(9789251-9789478)
chr5 (1-229)||(16409389-16409616)
chr5 (1-229)||(18441675-18441902)
chr5 (1-229)||(26177797-26178023)
chr5 (1-226)||(25412672-25412901)
chr5 (1-226)||(13342971-13343201)
chr5 (6-226)||(30182499-30182724)
chr5 (1-229)||(26170688-26170903)
chr5 (8-226)||(36074077-36074302)
chr5 (1-213)||(13239674-13239892)
chr5 (1-143)||(32636824-32636965)
chr5 (8-143)||(213465-213599)
chr5 (1-143)||(40147261-40147402)
chr5 (12-143)||(13488203-13488333)
chr5 (12-143)||(42428468-42428598)
chr5 (1-143)||(28278316-28278457)
chr5 (1-124)||(37439161-37439282)
chr5 (12-140)||(39468587-39468714)
chr5 (24-143)||(13695740-13695859)
chr5 (1-226)||(30682949-30683178)
chr5 (12-143)||(42426273-42426403)
chr5 (1-143)||(28750682-28750823)
chr5 (12-226)||(33831590-33831810)
chr5 (12-143)||(533769-533899)
chr5 (1-143)||(5058047-5058186)
chr5 (13-140)||(8565985-8566111)
chr5 (1-213)||(16452003-16452221)
chr5 (12-140)||(538028-538155)
chr5 (1-143)||(27637640-27637781)
chr5 (12-139)||(38747009-38747135)
chr5 (24-140)||(9049392-9049506)
chr5 (1-129)||(16640967-16641091)
chr5 (12-137)||(316769-316893)
chr5 (12-140)||(3075696-3075823)
chr5 (24-226)||(31182883-31183089)
chr5 (12-89)||(42309973-42310048)
chr5 (1-143)||(27015531-27015664)
chr5 (40-89)||(42926922-42926970)
[»] chr4 (70 HSPs)
chr4 (1-240)||(8395508-8395744)
chr4 (1-240)||(8393299-8393535)
chr4 (1-240)||(7124804-7125043)
chr4 (8-240)||(7122585-7122817)
chr4 (1-240)||(5138193-5138431)
chr4 (1-240)||(5135967-5136206)
chr4 (1-213)||(31495343-31495556)
chr4 (1-226)||(13992320-13992544)
chr4 (1-226)||(29999833-30000063)
chr4 (1-213)||(56178664-56178882)
chr4 (1-143)||(52095389-52095530)
chr4 (1-143)||(9927485-9927626)
chr4 (1-143)||(48143042-48143184)
chr4 (12-143)||(36994524-36994654)
chr4 (1-143)||(41964415-41964557)
chr4 (1-143)||(46703500-46703642)
chr4 (1-143)||(4587958-4588100)
chr4 (1-143)||(8665408-8665549)
chr4 (1-143)||(12739577-12739718)
chr4 (1-143)||(26364236-26364377)
chr4 (1-143)||(34570441-34570582)
chr4 (6-226)||(37740536-37740761)
chr4 (6-143)||(54883020-54883156)
chr4 (1-124)||(5370110-5370232)
chr4 (1-140)||(379383-379521)
chr4 (1-139)||(2209717-2209855)
chr4 (12-124)||(12743963-12744073)
chr4 (12-124)||(12745352-12745462)
chr4 (12-143)||(12747794-12747924)
chr4 (1-143)||(12073392-12073533)
chr4 (5-124)||(12744078-12744195)
chr4 (5-143)||(12745467-12745604)
chr4 (1-143)||(26175663-26175804)
chr4 (1-143)||(36463416-36463557)
chr4 (1-143)||(41639426-41639567)
chr4 (1-143)||(54199933-54200074)
chr4 (12-141)||(12119540-12119670)
chr4 (10-143)||(40632445-40632577)
chr4 (12-143)||(37229759-37229890)
chr4 (8-143)||(45687216-45687351)
chr4 (1-143)||(5429679-5429820)
chr4 (1-143)||(8648139-8648280)
chr4 (1-143)||(27416992-27417133)
chr4 (12-141)||(46147429-46147557)
chr4 (1-125)||(6655975-6656097)
chr4 (13-136)||(5207881-5208003)
chr4 (1-89)||(50673874-50673960)
chr4 (1-143)||(48893665-48893810)
chr4 (32-143)||(52082715-52082825)
chr4 (1-143)||(5871820-5871961)
chr4 (7-143)||(6542212-6542349)
chr4 (14-128)||(26699482-26699596)
chr4 (6-143)||(47038443-47038577)
chr4 (12-140)||(52467392-52467519)
chr4 (24-143)||(24969112-24969230)
chr4 (1-89)||(35662496-35662582)
chr4 (1-89)||(50262728-50262814)
chr4 (6-143)||(31474150-31474287)
chr4 (12-89)||(3913503-3913578)
chr4 (12-143)||(51337064-51337194)
chr4 (54-143)||(41639263-41639353)
chr4 (8-82)||(13009478-13009550)
chr4 (42-139)||(48142444-48142542)
chr4 (56-129)||(1983252-1983324)
chr4 (61-89)||(22882836-22882864)
chr4 (61-89)||(22934500-22934528)
chr4 (13-85)||(29254553-29254623)
chr4 (1-89)||(33089933-33090020)
chr4 (71-138)||(44967924-44967992)
chr4 (56-143)||(55085445-55085532)
[»] chr3 (73 HSPs)
chr3 (1-240)||(3617352-3617591)
chr3 (1-229)||(6716414-6716640)
chr3 (1-229)||(54635039-54635265)
chr3 (1-229)||(45282897-45283127)
chr3 (1-240)||(25637331-25637568)
chr3 (1-240)||(4600771-4601009)
chr3 (1-240)||(4598550-4598788)
chr3 (1-240)||(10056122-10056360)
chr3 (1-240)||(10058344-10058582)
chr3 (1-240)||(10060566-10060804)
chr3 (1-240)||(10062788-10063026)
chr3 (1-240)||(10065010-10065248)
chr3 (1-240)||(10211298-10211536)
chr3 (1-240)||(10209078-10209316)
chr3 (40-240)||(10067232-10067431)
chr3 (1-229)||(801005-801233)
chr3 (109-229)||(6718598-6718718)
chr3 (1-180)||(7780031-7780208)
chr3 (1-229)||(23200165-23200398)
chr3 (1-226)||(45095075-45095304)
chr3 (1-229)||(23197966-23198199)
chr3 (8-226)||(9636160-9636385)
chr3 (1-226)||(5258171-5258402)
chr3 (8-226)||(5260357-5260581)
chr3 (1-143)||(37408458-37408599)
chr3 (8-140)||(19683923-19684054)
chr3 (12-143)||(29196424-29196555)
chr3 (1-143)||(7762265-7762406)
chr3 (1-140)||(39153388-39153526)
chr3 (1-132)||(7764476-7764605)
chr3 (1-143)||(34491212-34491353)
chr3 (1-226)||(760757-760988)
chr3 (12-140)||(22835040-22835167)
chr3 (1-226)||(9581193-9581423)
chr3 (1-143)||(4569952-4570093)
chr3 (1-143)||(41819550-41819691)
chr3 (12-143)||(40734498-40734628)
chr3 (1-143)||(49199496-49199638)
chr3 (1-143)||(6095626-6095767)
chr3 (1-139)||(30236129-30236266)
chr3 (1-143)||(44331545-44331686)
chr3 (1-143)||(46860474-46860615)
chr3 (12-226)||(29682269-29682489)
chr3 (6-143)||(29813063-29813199)
chr3 (24-141)||(31314447-31314563)
chr3 (6-143)||(54593704-54593840)
chr3 (1-226)||(40735293-40735524)
chr3 (24-143)||(5236506-5236624)
chr3 (12-143)||(44700516-44700646)
chr3 (1-143)||(29810868-29811009)
chr3 (1-143)||(43401828-43401970)
chr3 (24-139)||(51398818-51398932)
chr3 (12-143)||(53921541-53921671)
chr3 (1-124)||(46173377-46173498)
chr3 (56-143)||(5433956-5434046)
chr3 (24-141)||(32891105-32891222)
chr3 (24-226)||(32744486-32744684)
chr3 (1-143)||(43403771-43403913)
chr3 (1-89)||(16499084-16499170)
chr3 (7-143)||(36018852-36018987)
chr3 (24-138)||(4055813-4055926)
chr3 (1-85)||(40913352-40913434)
chr3 (8-83)||(55302006-55302079)
chr3 (24-140)||(9666516-9666632)
chr3 (12-140)||(47304254-47304381)
chr3 (24-143)||(23391959-23392077)
chr3 (55-123)||(4386875-4386942)
chr3 (15-138)||(35138746-35138868)
chr3 (24-138)||(1313854-1313968)
chr3 (13-143)||(51352150-51352278)
chr3 (56-129)||(5373247-5373321)
chr3 (62-131)||(28253353-28253423)
chr3 (40-143)||(31340266-31340369)
[»] chr8 (54 HSPs)
chr8 (1-233)||(25689865-25690095)
chr8 (1-229)||(3439418-3439644)
chr8 (1-240)||(15290427-15290665)
chr8 (1-240)||(15470796-15471034)
chr8 (1-240)||(42575351-42575589)
chr8 (1-229)||(2627649-2627877)
chr8 (1-226)||(34254358-34254586)
chr8 (1-226)||(17982563-17982794)
chr8 (1-226)||(44303764-44303996)
chr8 (1-226)||(31218167-31218398)
chr8 (1-226)||(34256534-34256762)
chr8 (1-143)||(42498193-42498335)
chr8 (1-143)||(15212786-15212927)
chr8 (1-226)||(19945386-19945618)
chr8 (8-129)||(1746253-1746371)
chr8 (1-143)||(33352150-33352291)
chr8 (1-143)||(42435018-42435159)
chr8 (24-143)||(9765745-9765863)
chr8 (6-137)||(30143346-30143476)
chr8 (1-143)||(4283524-4283665)
chr8 (1-143)||(27811278-27811419)
chr8 (1-143)||(43036423-43036564)
chr8 (12-129)||(12702672-12702787)
chr8 (12-143)||(18141821-18141950)
chr8 (1-141)||(40321082-40321221)
chr8 (1-140)||(40328782-40328921)
chr8 (8-143)||(18655400-18655534)
chr8 (12-143)||(30291606-30291737)
chr8 (1-143)||(40221745-40221886)
chr8 (6-143)||(4731658-4731794)
chr8 (12-140)||(44353796-44353923)
chr8 (6-89)||(5689326-5689407)
chr8 (12-140)||(6598975-6599102)
chr8 (12-140)||(6674428-6674555)
chr8 (12-143)||(3303708-3303838)
chr8 (24-143)||(8965741-8965859)
chr8 (30-143)||(19491755-19491867)
chr8 (1-141)||(10930226-10930365)
chr8 (1-140)||(1345398-1345536)
chr8 (12-89)||(41366652-41366727)
chr8 (25-143)||(1292514-1292631)
chr8 (1-139)||(11383989-11384126)
chr8 (61-138)||(1822297-1822375)
chr8 (61-138)||(1856742-1856820)
chr8 (12-138)||(29796358-29796485)
chr8 (1-89)||(18106108-18106191)
chr8 (12-67)||(4743252-4743306)
chr8 (12-138)||(7597619-7597745)
chr8 (12-125)||(4162516-4162626)
chr8 (24-89)||(10015136-10015198)
chr8 (12-89)||(11712038-11712114)
chr8 (62-130)||(41266982-41267051)
chr8 (56-139)||(41364927-41365011)
chr8 (12-84)||(3073911-3073981)
[»] chr1 (68 HSPs)
chr1 (1-240)||(9036320-9036557)
chr1 (1-240)||(44203536-44203773)
chr1 (1-229)||(40282291-40282518)
chr1 (1-229)||(9987116-9987342)
chr1 (1-229)||(21053872-21054099)
chr1 (1-229)||(20622264-20622492)
chr1 (1-229)||(51765302-51765538)
chr1 (1-144)||(13316379-13316521)
chr1 (1-226)||(20762582-20762813)
chr1 (1-140)||(8550814-8550952)
chr1 (1-143)||(37168297-37168439)
chr1 (1-143)||(13547116-13547257)
chr1 (1-143)||(28220253-28220394)
chr1 (1-143)||(47255367-47255508)
chr1 (12-226)||(3156776-3156995)
chr1 (12-143)||(49918350-49918480)
chr1 (1-143)||(11348698-11348839)
chr1 (1-143)||(13549027-13549168)
chr1 (1-143)||(28265581-28265722)
chr1 (1-143)||(44455160-44455301)
chr1 (1-140)||(834194-834332)
chr1 (1-143)||(3189330-3189471)
chr1 (1-143)||(3198147-3198288)
chr1 (1-143)||(3206986-3207127)
chr1 (1-143)||(29136247-29136388)
chr1 (1-143)||(31925734-31925875)
chr1 (12-143)||(4552675-4552805)
chr1 (1-143)||(7482257-7482399)
chr1 (12-143)||(23555303-23555433)
chr1 (12-143)||(28223459-28223589)
chr1 (6-143)||(37503589-37503722)
chr1 (1-143)||(1833522-1833663)
chr1 (1-143)||(42298002-42298143)
chr1 (12-143)||(19754494-19754625)
chr1 (6-143)||(50167207-50167343)
chr1 (12-143)||(31659238-31659368)
chr1 (1-143)||(47115171-47115313)
chr1 (12-143)||(50169248-50169378)
chr1 (1-143)||(45644381-45644523)
chr1 (12-143)||(37559906-37560037)
chr1 (24-140)||(3847171-3847286)
chr1 (24-143)||(37033122-37033241)
chr1 (1-143)||(34603576-34603718)
chr1 (6-143)||(193611-193747)
chr1 (24-226)||(196958-197166)
chr1 (8-138)||(22079322-22079451)
chr1 (30-143)||(41360914-41361026)
chr1 (42-138)||(12318589-12318685)
chr1 (1-140)||(13659363-13659501)
chr1 (13-89)||(16455676-16455750)
chr1 (24-122)||(928026-928123)
chr1 (14-143)||(30476486-30476614)
chr1 (13-143)||(19752685-19752815)
chr1 (1-140)||(46064921-46065059)
chr1 (62-129)||(3460710-3460778)
chr1 (14-89)||(6808507-6808581)
chr1 (11-129)||(37282728-37282846)
chr1 (63-140)||(8871135-8871213)
chr1 (24-138)||(13938143-13938256)
chr1 (12-89)||(13138014-13138089)
chr1 (1-125)||(15820326-15820448)
chr1 (1-57)||(28242391-28242445)
chr1 (71-143)||(37879006-37879079)
chr1 (72-124)||(6378603-6378655)
chr1 (6-75)||(37876798-37876865)
chr1 (56-121)||(48382441-48382505)
chr1 (61-125)||(32736952-32737015)
chr1 (61-125)||(35109493-35109556)
[»] scaffold0565 (1 HSPs)
scaffold0565 (1-240)||(2631-2868)
[»] chr2 (43 HSPs)
chr2 (1-240)||(12647413-12647650)
chr2 (1-229)||(6266605-6266832)
chr2 (1-163)||(13656059-13656220)
chr2 (1-229)||(32289479-32289705)
chr2 (1-229)||(4484357-4484592)
chr2 (1-145)||(30833342-30833487)
chr2 (1-226)||(45099665-45099895)
chr2 (1-226)||(5723283-5723512)
chr2 (1-226)||(4503160-4503390)
chr2 (1-226)||(36205692-36205921)
chr2 (12-143)||(29867869-29867999)
chr2 (1-211)||(2334445-2334661)
chr2 (1-140)||(34139797-34139936)
chr2 (1-226)||(42362262-42362493)
chr2 (1-140)||(14633852-14633991)
chr2 (1-226)||(36988103-36988333)
chr2 (1-143)||(45726929-45727070)
chr2 (6-143)||(38312240-38312376)
chr2 (1-143)||(6595033-6595175)
chr2 (1-125)||(723771-723893)
chr2 (1-138)||(33648176-33648313)
chr2 (1-143)||(1631759-1631900)
chr2 (1-143)||(35446911-35447052)
chr2 (12-143)||(24398055-24398188)
chr2 (6-143)||(36773562-36773698)
chr2 (24-140)||(11690504-11690619)
chr2 (12-143)||(36318047-36318177)
chr2 (24-143)||(7815323-7815441)
chr2 (1-143)||(11151618-11151759)
chr2 (24-143)||(26353184-26353302)
chr2 (8-143)||(13121769-13121901)
chr2 (12-143)||(33162488-33162618)
chr2 (1-143)||(11067305-11067446)
chr2 (1-143)||(17057396-17057537)
chr2 (1-143)||(17085379-17085520)
chr2 (12-143)||(42288148-42288278)
chr2 (1-143)||(11049550-11049695)
chr2 (12-89)||(17490186-17490261)
chr2 (1-85)||(28671989-28672072)
chr2 (10-89)||(7451173-7451250)
chr2 (42-135)||(24885669-24885762)
chr2 (68-134)||(24197906-24197974)
chr2 (61-121)||(31417170-31417230)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-240)||(3753-3990)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-240)||(6177-6414)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-226)||(434443-434674)
[»] scaffold0491 (2 HSPs)
scaffold0491 (1-229)||(11188-11423)
scaffold0491 (1-145)||(8762-8907)
[»] scaffold1519 (1 HSPs)
scaffold1519 (1-226)||(827-1056)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-143)||(11557-11698)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-143)||(114602-114743)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-143)||(7327-7468)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-143)||(20442-20583)
[»] scaffold0176 (1 HSPs)
scaffold0176 (7-143)||(18037-18171)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-140)||(149124-149262)
[»] scaffold0236 (1 HSPs)
scaffold0236 (1-87)||(10546-10630)
[»] scaffold0014 (1 HSPs)
scaffold0014 (43-139)||(80351-80447)
[»] scaffold0219 (1 HSPs)
scaffold0219 (12-138)||(27480-27606)


Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 20344038 - 20343811
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20344038 cctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacaagttcac 20343940  T
Q  101 catgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20343939 aatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 20343840  T
Q  201 ctctaatcaaagaaccctaaaccctagag 229  Q
    |||||||||||||||||||||||||||||    
T  20343839 ctctaatcaaagaaccctaaaccctagag 20343811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 18388787 - 18389024
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  18388787 cctactctggaggagagattgtactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttacaagaaattagcttgacaagttca 18388885  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  18388886 ctatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagat 18388983  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18388984 actctaatcaaagaaccctaaaccctagagcttcccctttg 18389024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 18392223 - 18392460
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  18392223 cctactctggaggagagattgtactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttacaagaaattagcttgacaagttca 18392321  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  18392322 ctatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagat 18392419  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18392420 actctaatcaaagaaccctaaaccctagagcttcccctttg 18392460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 32060349 - 32060590
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaa--gggatacaaaagggttacaagaaattagcttgacaagtt 97  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| ||| |||||||||||||||||||||||||    
T  32060349 cctactctggaggagagattgtactctccaatccactatcaaatgagttctttacaaaaaggggatacaagagg-ttacaagaaattagcttgacaagtt 32060447  T
Q  98 caccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagag 197  Q
    ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32060448 cactatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagag 32060547  T
Q  198 atactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  32060548 atactctaatcaaagaaccctaaaccctagagcttaccctttg 32060590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 6592367 - 6592604
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  6592367 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttacaagaaattagcttgacaagttca 6592465  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  6592466 ctatgaacaaaccctaatttctacccatttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagat 6592563  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6592564 actctaatcaaagaaccctaaaccctagagcttcccctttg 6592604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 6594585 - 6594822
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  6594585 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttacaagaaattagcttgacaagttca 6594683  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  6594684 ctatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagat 6594781  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6594782 actctaatcaaagaaccctaaaccctagagcttcccctttg 6594822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 24789982 - 24789755
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||| | ||||||||||||||||| ||||||||||    
T  24789982 cctactctggaggagagatagtactctccaatccactatcaaa-gagtttttacaaaagggatacaaaatg-ttacaagaaattagctttgacaagttca 24789885  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  24789884 caatgaacaaaccctaatttttacccttttcccaatcttaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagat 24789785  T
Q  200 actctaatcaaagaaccctaaaccctagag 229  Q
    ||||||||||||||||||||||||||||||    
T  24789784 actctaatcaaagaaccctaaaccctagag 24789755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 73 - 240
Target Start/End: Original strand, 1562103 - 1562268
Alignment:
Q  73 ttacaagaaattagcttgacaagttcaccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggt 172  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  1562103 ttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctc--tacaaggt 1562200  T
Q  173 gtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1562201 gtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttg 1562268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 39731510 - 39731283
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagct-tgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||| | |||||||||||    
T  39731510 cctactctggaggagagattgaactctccaatccactatcaa-tgagttcttacaaaagagatacaaaagagttacaagaaattagatctgacaagttca 39731412  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagaga 198  Q
    | | |||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || ||   |||||||||| | ||||||  ||||||||||||    
T  39731411 caaagaacaa-ccctaatttctaccctttttccaatctcaccaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga 39731313  T
Q  199 tactctaatcaaagaaccctaaaccctagag 229  Q
      |||||||||||| ||||||||||||||||    
T  39731312 agctctaatcaaag-accctaaaccctagag 39731283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 8 - 229
Target Start/End: Original strand, 43504188 - 43504409
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagg-gttacaagaaattagctt-gacaagttcaccatga 105  Q
    |||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||||||| | ||||||||||||||| || ||||||||||| ||||    
T  43504188 tggaggagagattgaactctccaattcactatcaa-tgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatga 43504286  T
Q  106 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactct 204  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||| | |||||||||||||||||||  ||| ||||||||  ||||    
T  43504287 acaa-ccctaatttctacccttttcccaatctcaccaagacactcgatgattttctctcttcaaggtgtttcccatgtttcccaagccaagagaagctct 43504385  T
Q  205 aatcaaagaaccctaaaccctagag 229  Q
    |||||||| || |||||||||||||    
T  43504386 aatcaaag-actctaaaccctagag 43504409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 35854055 - 35853825
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||    
T  35854055 cctactctggaggagagattgaactctccaatccactatc-aatgagttcttac-aaagagatacaaaagggttacaagaaattagctttgacaagttca 35853958  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaac 190  Q
    | | |||| ||||||||||||||||| |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  ||||    
T  35853957 caaagaac-aaccctaatttctaccctttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaac 35853859  T
Q  191 ccaagagatactctaatcaaagaaccctaaacccta 226  Q
    |||||||| |||| |||||||| |||||||||||||    
T  35853858 ccaagaga-actcaaatcaaag-accctaaacccta 35853825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 25766987 - 25767215
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaaggg-ttacaagaaattagctt-gacaagttc 98  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||||||||||| |||||||||    
T  25766987 cctactctggaggagagattgaactctccaatccactatcaa-tgagttctt-caaaagagatacaaaaggggttacaagaaattagctttgacaagttc 25767084  T
Q  99 accatgaacaaaccctaatttctacccttttc-ccaatctcac----caagacactcaatgattctctctttacaaggtgtttcccatgttttcaaccca 193  Q
    || | |||||| |||||||||||||||||||  |||||||||     ||||||||||||||||| || ||   |||||||||| | ||||||    || |    
T  25767085 acaaagaacaa-ccctaatttctacccttttttccaatctcaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgttt---cccaa 25767180  T
Q  194 agagatactctaatcaaagaaccctaaaccctagag 229  Q
    ||||| ||||||||||||| ||||||||||||||||    
T  25767181 agagaaactctaatcaaag-accctaaaccctagag 25767215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 29991194 - 29990965
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||||| |||||| ||| ||| | ||||||||||||||||||||||||||||| ||||||||||    
T  29991194 cctactctggaggagagattgatctctccaatccactatcaa-tgagttattagaaa-gagatacaaaagggttacaagaaattagctttgacaagttca 29991097  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacc 191  Q
    | |  ||||| |||||||||||| |||||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  |||||    
T  29991096 caaataacaa-ccctaatttctatccttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacc 29990998  T
Q  192 caagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||| ||||||||||||| |||||||||||||    
T  29990997 caagaga-actctaatcaaag-accctaaacccta 29990965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 6 - 229
Target Start/End: Complemental strand, 48408940 - 48408709
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagc-ttgacaagttcaccat 103  Q
    |||||||||||||||  |||||||||||||||||| |||||||| || |||||| ||||||||| |||||||||||||||||| |||||||||| || |     
T  48408940 tctggaggagagattaaactctccaatccactatc-aatgagttatttcaaaagagatacaaaaggggttacaagaaattagctttgacaagtttacaaa 48408842  T
Q  104 gaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaa 194  Q
    |||| |||  |||||||||||| |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  ||||||||    
T  48408841 gaac-aacattaatttctaccctttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaa 48408743  T
Q  195 gagatactctaatcaaagaaccctaaaccctagag 229  Q
    |||| ||||||||||||| ||||||||||||||||    
T  48408742 gagaaactctaatcaaag-accctaaaccctagag 48408709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 14069871 - 14070001
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| |||||||||||||||||| ||||||||||||| | |||| ||    
T  14069871 ggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aa 14069967  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| ||||||||||||||||||    
T  14069968 ccctaatttctaccctttttcccaatctcaccaa 14070001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 14379899 - 14380029
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| |||||||||||||||||| ||||||||||||| | |||| ||    
T  14379899 ggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aa 14379995  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| ||||||||||||||||||    
T  14379996 ccctaatttctaccctttttcccaatctcaccaa 14380029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 25615994 - 25615785
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||| ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||||||||  |||||  ||    
T  25615994 cctactctggaggagagattgatctctctaatccactatc-aatgagttcttacaaaa-tgatacaaatgggttacaagaaattagcttaaacaagcgca 25615897  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaagacactcaatgattctctct-ttacaaggtgtttcccatgtttt-caacccaaga 196  Q
    |   ||||||| |||||||||||||| ||||||||||||   ||||||||||||||||| |||||    |||||||||| | ||||||| ||||||||||    
T  25615896 catagaacaaa-cctaatttctacccattttcccaatct---caagacactcaatgattttctctcacccaaggtgtttacaatgttttccaacccaaga 25615801  T
Q  197 gatactctaatcaaaga 213  Q
    || ||||||||||||||    
T  25615800 ga-actctaatcaaaga 25615785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 226
Target Start/End: Complemental strand, 4178909 - 4178685
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatg 104  Q
    |||||||||||||||| ||| | |||||||||||||| |||||||||   |||| ||||||||||||||||||||||||||| ||  ||||||||| | |    
T  4178909 tctggaggagagattgaactgttcaatccactatcaa-tgagttcttc--aaagagatacaaaagggttacaagaaattagctttcccaagttcacaaag 4178813  T
Q  105 aacaaaccctaatttctacc-cttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaag 195  Q
    ||| ||||||||||||||||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  |||||||||    
T  4178812 aac-aaccctaatttctaccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaag 4178714  T
Q  196 agatactctaatcaaagaaccctaaacccta 226  Q
    ||| ||||||||||||| |||||||||||||    
T  4178713 aga-actctaatcaaag-accctaaacccta 4178685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 22270114 - 22269973
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||| ||||||||| |||| |||||||| ||||||||||||||||||||  ||||| |||    
T  22270114 cctactctggaggagagattgatctctccaatccactatc-aatcagttcttac-aaagagatacaaatgggttacaagaaattagcttcaacaagctca 22270017  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  22270016 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 22269973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 34310743 - 34310884
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| |||||||||||||||||  |||||||| | ||||||||||||||||||  |||| ||||    
T  34310743 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttacaaaa-agatacaaatgtgttacaagaaattagcttcaacaatttca 34310840  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  34310841 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 34310884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 41317461 - 41317602
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||||||| |||||||| |||    
T  41317461 cctaatctgggggagagattgatctctccaatccactatc-aatgagttcttac-aaagggatacaaatggattacaagaaattagctttgacaagctca 41317558  T
Q  100 ccatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||  ||||||||||||||||||    
T  41317559 caaagaac-aaccctaatttctaccaattttcccaatctcaccaa 41317602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 48491720 - 48491579
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||||| ||||||||| |||| | |||||||| ||||||||||||||||||||  |||||||||    
T  48491720 cctaatctgggggagagattgatctctccaatccactatcaa-tgagttctttcaaa-gagatacaaatgggttacaagaaattagcttcaacaagttca 48491623  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  48491622 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 48491579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 226
Target Start/End: Complemental strand, 19502314 - 19502088
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatg 104  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||| |||||||| |||| |      
T  19502314 tctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaaagagttacaagaaattagctttgacaagctcacaaaa 19502217  T
Q  105 aacaaaccctaatttctaccc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaa 194  Q
    ||| |||| ||||||||| ||  ||||| |||||||||       |||||||||||||||||||| ||   |||||||||| | ||||||  ||||||||    
T  19502216 aac-aaccttaatttctaaccttttttcgcaatctcaccactgaacaagacactcaatgattctcactcaccaaggtgtttacaatgtttcccaacccaa 19502118  T
Q  195 gagatactctaatcaaagaaccctaaacccta 226  Q
    |||| ||||||||||||| ||||| |||||||    
T  19502117 gaga-actctaatcaaag-accctcaacccta 19502088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 23555181 - 23555039
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| | |||||||| ||||||||||||||||||  |||||||||    
T  23555181 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagaggtacaaaagtgttacaagaaattagcttcaacaagttca 23555084  T
Q  100 ccatgaacaaaccctaatttctacc--cttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||   ||||||||||||||||||    
T  23555083 caaagaac-aaccctaatttctaccattttttcccaatctcaccaa 23555039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 213
Target Start/End: Original strand, 47673981 - 47674189
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  |||||||||| | |||| ||    
T  47673981 ggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aa 47674077  T
Q  111 ccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctctct-ttacaaggtgtttcccatgtttt-caacccaagagata 200  Q
    ||||||||||||||| ||||| |||||||||       ||||||||||||||||| || ||    |||||||||| | ||||||| |||||||||||| |    
T  47674078 ccctaatttctacccattttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgttttccaacccaagaga-a 47674176  T
Q  201 ctctaatcaaaga 213  Q
    |||||||||||||    
T  47674177 ctctaatcaaaga 47674189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1560693 - 1560757
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatac 65  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1560693 cctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatac 1560757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 27347958 - 27347817
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  |||| |||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  |||||||||    
T  27347958 cctaatctgggggagagattgatctctgcaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttca 27347861  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| || |||||||||||||| ||||||||||||||||||    
T  27347860 caaagaac-aatcctaatttctacccattttcccaatctcaccaa 27347817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 30024759 - 30024900
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| |||| |||||  |||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||    
T  30024759 cctactctgggggagtgattgatctctccaatccactatcaaa-gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctca 30024856  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | |||||| ||||||||||||||||| ||||| ||||||||||||    
T  30024857 caatgaac-aaccctaatttctacccattttctcaatctcaccaa 30024900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 4586291 - 4586161
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||| ||||||||||||| |||| |||| ||| ||||||||| ||||||||||  |||||||||| | |||| ||    
T  4586291 ggagagattgatctctccaatccactatc-aatgagttcttac-aaagagataaaaatgggttacaaaaaattagcttcaacaagttcacaaagaac-aa 4586195  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| ||||||||||||||||||    
T  4586194 ccctaatttctacccattttcccaatctcaccaa 4586161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 8359343 - 8359485
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt-gacaagttc 98  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||| ||  ||||| ||    
T  8359343 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaaatgggttacaagaaattagtttaaacaagctc 8359440  T
Q  99 accatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    || | ||| |||||||||||||||||| ||||||||||||| ||||    
T  8359441 acaaagaa-aaaccctaatttctacccattttcccaatctccccaa 8359485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 41649049 - 41649175
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcaccatgaacaaac 111  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||  ||||| |||| | |||||||     
T  41649049 ggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttacaagaaattagctaaacaagctcacaaagaacaaa- 41649145  T
Q  112 cctaatttctacc-cttttcccaatctcac 140  Q
    |||||||||||||  |||| ||||||||||    
T  41649146 cctaatttctaccaatttttccaatctcac 41649175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 18126785 - 18126644
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttg-acaagttca 99  Q
    |||| ||||| ||||||||||    ||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||| |||||||||    
T  18126785 cctagtctgggggagagattgattcctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttgaacaagttca 18126688  T
Q  100 ccatgaacaaaccctaatttctac-ccttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||| | |||| |||||||||||||    
T  18126687 caaagaac-aaccctaatttctacacatttttccaatctcaccaa 18126644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 29608878 - 29608737
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||||||| |||||   |||||||||||||||||| |||||||||||||| | |||||||| | ||||||||||||||||||  ||||| |||    
T  29608878 cctactctggaggagtgattgatatctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctca 29608781  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  29608780 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 29608737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 26417446 - 26417316
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||| || |||||||||| |||| |||||||| |||||||||||||||| |||  ||||| |||| | |||| ||    
T  26417446 ggagagattgatctctccaatccactatc-aacgagttcttac-aaagagatacaaatgggttacaagaaattatcttcaacaagctcacaaagaac-aa 26417350  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| ||||||||||||||||||    
T  26417349 ccctaatttctacccattttcccaatctcaccaa 26417316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 2360999 - 2361140
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||   |||| ||||||||||||| |||||||||||||| | |||||||| | ||||||||||||||||||  ||||| |||    
T  2360999 cctaatctgggggagagattgatatctcaaatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctca 2361096  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  2361097 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 2361140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 4253566 - 4253697
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttga-caagttcaccatgaacaaa 110  Q
    ||||||||||  ||||| |||||| |||||| ||||||||| | |||| |||| |||||||||||| ||||||||||| | |||| |||| | |||||||    
T  4253566 ggagagattgatctctctaatccattatcaa-tgagttctttccaaagagatataaaagggttacatgaaattagcttcaacaagctcacaaagaacaaa 4253664  T
Q  111 ccctaatttctacccttttcccaatctcaccaa 143  Q
    |||||||||||||| |||| ||||| |||||||    
T  4253665 ccctaatttctaccattttaccaatttcaccaa 4253697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 6432112 - 6431971
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||| |||||||||||  |||||||||||||||||||  ||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||    
T  6432112 cctactctgaaggagagattgatctctccaatccactatcaac-gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctca 6432015  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| || |||||||||||||| |||||||||||| |||||    
T  6432014 caaagaac-aatcctaatttctacccattttcccaatctaaccaa 6431971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 8153483 - 8153342
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| |||||||| |||| |||| |||||||| | |||||||||||||||| |||||||  |||    
T  8153483 cctaatctgggggagagattgatctctccaatccactatc-aatgagttattac-aaagagatacaaatgagttacaagaaattagctttgacaatctca 8153386  T
Q  100 ccatgaacaaaccctaatttctac-ccttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||| | ||||||||||||||||||    
T  8153385 caaagaac-aaccctaatttctactcattttcccaatctcaccaa 8153342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32358081 - 32358167
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  32358081 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaattagctt 32358167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 143
Target Start/End: Original strand, 48599366 - 48599502
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatg 104  Q
    ||||||||||||||||  ||||||||||||||||| |||||| |||| | |||| |||||||| | ||||||||||||||||||  ||||| |||| | |    
T  48599366 tctggaggagagattgatctctccaatccactatc-aatgagctctt-ccaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaag 48599463  T
Q  105 aacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||| ||||||||||||||||| |||||||||| |||||||    
T  48599464 aac-aaccctaatttctacccattttcccaatatcaccaa 48599502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 2390423 - 2390301
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  |||||||||||||||| | ||||||| |||| |||| |||||||| ||||||||||||||||||||  ||||| |||    
T  2390423 cctactctggaggagagattgatctctccaatccactat-atatgagttattac-aaagagatacaaatgggttacaagaaattagcttcaacaagctca 2390326  T
Q  100 ccatgaacaaaccctaatttctaccc 125  Q
    | | |||| |||||||||||||||||    
T  2390325 caaagaac-aaccctaatttctaccc 2390301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 31733007 - 31733137
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttga-caagttcaccatgaacaaa 110  Q
    ||||||||||  |||||||||||| |||||| |||||||||||||| | |||||||| |||||||||||||||||||| | |||| |||| | |||| ||    
T  31733007 ggagagattgatctctccaatccagtatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaccaagctcacaaagaac-aa 31733103  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| ||||| || |||||||||    
T  31733104 ccctaatttctacccattttctcagtctcaccaa 31733137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 36146446 - 36146576
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||| ||||||||||| ||||||||||||| |||| |||||||| ||||||| ||||||||||||  ||||| |||| |  ||||||    
T  36146446 ggagagattgatctctcaaatccactatc-aatgagttcttac-aaagagatacaaatgggttac-agaaattagcttcaacaagctcacaaataacaaa 36146542  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | ||||||||||||| ||||||||||||||||||    
T  36146543 ctctaatttctacccattttcccaatctcaccaa 36146576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 47676174 - 47676304
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||| ||||||||||  |||||||||||||| | |||||||| ||||||||||||||||||||  |||| ||||| | |||| ||    
T  47676174 ggagagattgatctctccattccactatcat-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaac-aa 47676270  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| ||||| ||||||||||||    
T  47676271 ccctaatttctacccattttctcaatctcaccaa 47676304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 3259136 - 3258995
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| |||| ||| |||| |||| |||||||| | ||||||| ||||||||||  ||||| |||    
T  3259136 cctactctggaggagagattgatctctccaatccactatc-aatgggtttttac-aaagagatacaaatgagttacaataaattagcttaaacaagctca 3259039  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||| ||||||||| ||||||||||||||||||    
T  3259038 caaagaac-aaccctagtttctacccattttcccaatctcaccaa 3258995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 4508733 - 4508874
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||| || ||||||||  |||||||||||||| |||| |||||||||||||| | |||||||| ||||||||||||||||||||  | ||| |||    
T  4508733 cctactctgaagaagagattgatctctccaatccactctcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaataagctca 4508830  T
Q  100 ccatgaacaaaccctaatttctac-ccttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||| | ||||||||||||||||||    
T  4508831 caaagaac-aaccctaatttctactcattttcccaatctcaccaa 4508874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 48489572 - 48489431
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  |||||||||||||||| || |||||| || |||| | |||||||| ||||||||||||||||||||  |||||||      
T  48489572 cctaatctgggggagagattgatctctccaatccactatgaa-tgagttattgcaaa-gagatacaaatgggttacaagaaattagcttcaacaagtttt 48489475  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  48489474 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 48489431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 496021 - 496148
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||| ||||||||||||  |||| |||||||| ||||| ||||||||||||||  ||||| |||| | ||||  |    
T  496021 ggagagattgatctctccaatccactatc-aatgagttctta-taaagagatacaaatgggttgcaagaaattagcttcaacaagctcacaaagaac-ta 496117  T
Q  111 ccctaatttctaccc-ttttcccaatctcac 140  Q
    ||||||||||||||| |||||||||||||||    
T  496118 ccctaatttctacccattttcccaatctcac 496148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 23565100 - 23565210
Alignment:
Q  13 gagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaac 111  Q
    |||||||||  ||||||||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||| ||  ||||| |||| | ||||||      
T  23565100 gagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagagttacaagaaattagtttcaacaagctcacaaagaacaaga 23565197  T
Q  112 cctaatttctacc 124  Q
    |||||||||||||    
T  23565198 cctaatttctacc 23565210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 143
Target Start/End: Complemental strand, 43864373 - 43864244
Alignment:
Q  13 gagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaac 111  Q
    |||||||||  ||||||||||||||||||| | |||| ||||||| | |||||||| |||||||| |||||||||||  |||||||||| | |||| |||    
T  43864373 gagagattgatctctccaatccactatcaatt-agtttttacaaa-gagatacaaatgggttacaggaaattagcttcaacaagttcacaaagaac-aac 43864277  T
Q  112 cctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||  ||| |||||||||||||    
T  43864276 cctaatttctacccacttttccaatctcaccaa 43864244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 23344092 - 23343975
Alignment:
Q  25 tctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttga-caagttcaccatgaacaaaccctaatttctac 123  Q
    ||||||||| | |||||| |||||||| ||||| |  |||| ||||||||||||||||||||||| | |||| |||| | ||| ||||| ||||||||||    
T  23344092 tctccaatctattatcaa-tgagttctcacaaa-gatatactaaagggttacaagaaattagcttcaacaagctcacaaagaataaaccttaatttctac 23343995  T
Q  124 ccttttcccaatctcaccaa 143  Q
    |||||||| |||||||||||    
T  23343994 ccttttccaaatctcaccaa 23343975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 226
Target Start/End: Original strand, 38671272 - 38671480
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttga-caagttcaccatgaacaaaccctaatttcta 122  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| | ||||||| |||||||||| | |||| |||| | |||||| ||||||||||||    
T  38671272 ctcttcaatccactatcaa-tgagttcttacaaa-gtgatacaaatgtgttacaataaattagcttaaacaagctcacaaagaacaa-ccctaatttcta 38671368  T
Q  123 ccc-ttttcccaatctcac-------caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaag 212  Q
    ||| |||||||||||||||       ||||||||||||||||| || ||    |||||||||| | ||||||  |||||||||||| |||||||||||||    
T  38671369 cccattttcccaatctcacaaatgaacaagacactcaatgattttcgctcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag 38671467  T
Q  213 aaccctaaacccta 226  Q
     ||||| |||||||    
T  38671468 -accctcaacccta 38671480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 1113787 - 1113660
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  |||||||||| |||||||| |||||||||||||| | |||||||| |||||| |||||||||||||  ||||| |||| | |||| ||    
T  1113787 ggagagattgatctctccaatctactatcaa-tgagttcttacaaa-gagatacaaatgggttataagaaattagcttcaacaagctcacaaagaac-aa 1113691  T
Q  111 ccctaatttcta-cccttttcccaatctcac 140  Q
    |||||||||||| || ||||| |||||||||    
T  1113690 ccctaatttctatccattttctcaatctcac 1113660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 31105443 - 31105558
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    ||||||||||||| ||||| ||||||||||||||| | ||||||| ||||||||||||||||||||  ||||| |||| | ||| |||  ||||||||||    
T  31105443 ctctccaatccaccatcaa-tgagttcttacaaaaag-atacaaatgggttacaagaaattagcttcaacaagctcacaaagaa-aaaatctaatttcta 31105539  T
Q  123 ccc-ttttcccaatctcac 140  Q
    ||| |||||||||||||||    
T  31105540 cccattttcccaatctcac 31105558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 6359992 - 6360065
Alignment:
Q  14 agagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    ||||||||  |||||||||| |||||||| |||||||||||||| | |||||||| ||||||||||||||||||||    
T  6359992 agagattgatctctccaatcaactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctt 6360065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 24525992 - 24526065
Alignment:
Q  72 gttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    |||||||||||||||||| |||||| |||| | ||||||| |||||||||||||| |||||||||| |||||||    
T  24525992 gttacaagaaattagctttgacaagctcacaaagaacaaaacctaatttctacccattttcccaatttcaccaa 24526065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 12097944 - 12098027
Alignment:
Q  61 gatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    |||||||| |||||||||||||||| |||  ||||| |||| |||||| ||||||||||||||||| |||||||||||| |||||    
T  12097944 gatacaaatgggttacaagaaattaacttcaacaagctcacaatgaac-aaccctaatttctacccattttcccaatctaaccaa 12098027  T

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Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 36574565 - 36574683
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    |||||||| |||||||||| |||||||||   |||| |||| ||||||||||||||||||||||||  ||||  |||| | ||||||| | |||||||||    
T  36574565 ctctccaaaccactatcaa-tgagttctttacaaagagatataaaagggttacaagaaattagcttcaacaaactcacaaagaacaaatcttaatttcta 36574663  T
Q  123 cccttttcccaatctcaccaa 143  Q
     ||||| ||||||||| ||||    
T  36574664 -cctttccccaatctctccaa 36574683  T

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Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 1360243 - 1360316
Alignment:
Q  66 aaaagggttacaagaaattagcttga-caagttcaccatgaacaaaccctaatttctacccttttcccaatctca 139  Q
    ||||||||||||||||||| |||| | ||||||| ||| || |||| ||||||||||||| ||||||||||||||    
T  1360243 aaaagggttacaagaaattcgcttcaacaagttctccaaga-caaaacctaatttctacctttttcccaatctca 1360316  T

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Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 2759248 - 2759339
Alignment:
Q  25 tctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatt 118  Q
    |||||||||||||||| ||||||||||||| |||| |||| ||| | ||||||||||||||||||  |||||||||| | |||| ||||||||||    
T  2759248 tctccaatccactatc-aatgagttcttac-aaagagatataaatgagttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatt 2759339  T

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Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 4510585 - 4510661
Alignment:
Q  11 aggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    |||||||||||   ||| |||||||||||||| |||||||||| ||| | |||||||| ||||||||||||||||||||    
T  4510585 aggagagattgatttcttcaatccactatcaa-tgagttcttataaa-gagatacaaatgggttacaagaaattagctt 4510661  T

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Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 4512427 - 4512503
Alignment:
Q  11 aggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    |||||||||||   ||| |||||||||||||| |||||||||| ||| | |||||||| ||||||||||||||||||||    
T  4512427 aggagagattgatttcttcaatccactatcaa-tgagttcttataaa-gagatacaaatgggttacaagaaattagctt 4512503  T

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Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 22328471 - 22328556
Alignment:
Q  56 aaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctaccctt--ttcccaatctc 138  Q
    |||| |||||||||| ||||||||||||||||||  ||||| |||| | |||||||| |||||||||| ||||  |||||||||||    
T  22328471 aaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaactctaatttctaacctttcttcccaatctc 22328556  T

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Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 31518896 - 31518795
Alignment:
Q  42 aatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgac-aagttcaccatgaacaaaccctaatttctaccc-ttttcccaatctca 139  Q
    |||||||||||||||| | |||||||| | ||||||||||| |||||| |  ||| |||| | ||||||||| |||||||||||  ||||||||||||||    
T  31518896 aatgagttcttacaaa-gagatacaaatgagttacaagaaactagcttcaataagctcacaaagaacaaacc-taatttctacctattttcccaatctca 31518799  T
Q  140 ccaa 143  Q
    ||||    
T  31518798 ccaa 31518795  T

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Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 24514934 - 24515018
Alignment:
Q  141 caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||||||||||||| || ||   |||||||||| | ||||||  |||||||||||| ||||||||||||| |||||||||||||    
T  24514934 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctaaacccta 24515018  T

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Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 24525540 - 24525584
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaa 57  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||    
T  24525540 ggagagattgatctctccaatccactatc-aatgagttcttacaaa 24525584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 28617249 - 28617182
Alignment:
Q  56 aaagggatacaaaagggttacaagaaattagcttgacaagttcaccatgaacaaaccctaatttctacc 124  Q
    |||| |||||||  |||||||||||||||||||| | ||| |||| | ||||||| |||||||||||||    
T  28617249 aaagtgatacaatggggttacaagaaattagctt-aaaagctcacaaagaacaaaacctaatttctacc 28617182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 31519031 - 31518965
Alignment:
Q  13 gagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaa 81  Q
    |||||||||  |||||||||||||| || ||||||||||||| |||| |||||||| | ||||||||||    
T  31519031 gagagattgatctctccaatccactgtc-aatgagttcttac-aaagagatacaaatgagttacaagaa 31518965  T

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Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 25421447 - 25421208
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  25421447 cctactctggaggagagattgtactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttacaagaaattagcttgacaagttca 25421349  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25421348 ctatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 25421249  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25421248 actctaatcaaagaaccctaaaccctagagcttcccctttg 25421208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 16555003 - 16554772
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcaccatgaac 107  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  16555003 tggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacaagttcacaatgaac 16554905  T
Q  108 aaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaat 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16554904 aaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaat 16554805  T
Q  208 caaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||| | ||||||||    
T  16554804 caaagaaccctaaaccctagagttgcccctttg 16554772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 16631559 - 16631328
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcaccatgaac 107  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  16631559 tggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacaagttcacaatgaac 16631461  T
Q  108 aaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaat 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16631460 aaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaat 16631361  T
Q  208 caaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||| | ||||||||    
T  16631360 caaagaaccctaaaccctagagttgcccctttg 16631328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 16653253 - 16653015
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcac 100  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16653253 cctactctggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacaagttcac 16653155  T
Q  101 catgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 200  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16653154 aatgaacaaaccctaatttttacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 16653055  T
Q  201 ctctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  16653054 ctctaatcaaagaaccctaaaccctagagttgcccctttg 16653015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 16578545 - 16578783
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcac 100  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16578545 cctactctggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacaagttcac 16578643  T
Q  101 catgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 200  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16578644 aatgagcaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaacgtgtttcccatgttttcaacccaagagata 16578743  T
Q  201 ctctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  16578744 ctctaatcaaagaaccctaaaccctagagttgcccctttg 16578783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 16616835 - 16616597
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcac 100  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16616835 cctactctggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacaagttcac 16616737  T
Q  101 catgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 200  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16616736 aatgagcaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaacgtgtttcccatgttttcaacccaagagata 16616637  T
Q  201 ctctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  16616636 ctctaatcaaagaaccctaaaccctagagttgcccctttg 16616597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 6 - 240
Target Start/End: Complemental strand, 6027383 - 6027151
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttcaccatg 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||| |||    
T  6027383 tctggaggagagattgtactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttacaagaaattagcttgacaagttcactatg 6027285  T
Q  105 aacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactct 204  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  6027284 aacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagatactct 6027187  T
Q  205 aatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    ||||||||||||||||||||||||||||||||||||    
T  6027186 aatcaaagaaccctaaaccctagagcttcccctttg 6027151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 6 - 229
Target Start/End: Complemental strand, 27647996 - 27647777
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcaccatga 105  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  27647996 tctggaggagagtttgtactctccaatccactatcaaa-gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacaagttcacaatga 27647899  T
Q  106 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactcta 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  27647898 acaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctc--tacatggtgtttcccatgttttcaacccaagagatactcta 27647801  T
Q  206 atcaaagaaccctaaaccctagag 229  Q
    ||||||||||||||||||||||||    
T  27647800 atcaaagaaccctaaaccctagag 27647777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 33342132 - 33342370
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||  ||||| ||| |||||||||||||||||||||| ||||    
T  33342132 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggagtacaagagg-ttacaagaaattagcttgacaatgttc 33342230  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  33342231 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaga 33342328  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33342329 tactctaatcaaagaaccctaaaccctagagcttcccctttg 33342370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 34164999 - 34164761
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  34164999 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacaatgttc 34164901  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||     
T  34164900 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagg 34164803  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  34164802 tactctaatcaaagaaccctaaactctagagcttcccctttg 34164761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 34167221 - 34166983
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||| ||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  34167221 cctactctggaggagagtttgtactctccaatccactatcaaataagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacaatgttc 34167123  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||     
T  34167122 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagg 34167025  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  34167024 tactctaatcaaagaaccctaaactctagagcttcccctttg 34166983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 412243 - 412016
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagg-gttacaagaaattagctt-gacaagttc 98  Q
    |||| |||||||||||||||| |||||| ||||||||||||| |||||||||||||||| ||||||||| | ||||||||||||||| || || ||||||    
T  412243 cctactctggaggagagattgaactctctaatccactatcaa-tgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgataagttc 412145  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  412144 acaatgaacaa-ccctaatttctacctttttcccaatctcaccaagacactcaatgattttctctcttcaaggtgtttcccatgttttcaacccaagaga 412046  T
Q  199 tactctaatcaaagaaccctaaaccctagag 229  Q
      |||||||||||| || |||||||||||||    
T  412045 agctctaatcaaag-actctaaaccctagag 412016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 3072786 - 3073014
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagg-gttacaagaaattagctt-gacaagttc 98  Q
    |||| |||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||||||| | ||||||||||||||| || |||||||||    
T  3072786 cctactctggaggagagattgaactctccaattcactatcaa-tgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttc 3072884  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagag 197  Q
    || |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||  |||||||||||    
T  3072885 acaatgaacaa-ccctaatttctaccattttcccaatctcaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagag 3072983  T
Q  198 atactctaatcaaagaaccctaaaccctagag 229  Q
    |  |||||||||||| || |||||||||||||    
T  3072984 aagctctaatcaaag-actctaaaccctagag 3073014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 13154056 - 13153893
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  13154056 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacaatgttc 13153958  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctct 163  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13153957 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct 13153893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 31404702 - 31404932
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||    
T  31404702 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaaagggttacaagaaattagctttgacaagttca 31404799  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgtttt-caacc 191  Q
    | | |||| |||||||||||||||| |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||| |||||    
T  31404800 caaagaac-aaccctaatttctaccattttcccaatctcactgatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgttttccaacc 31404898  T
Q  192 caagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||| ||||||||||||  |||||||||||||    
T  31404899 caagaga-actctaatcaaaagaccctaaacccta 31404932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 2171559 - 2171792
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||    
T  2171559 cctactctggaggagagattgaactctccaatccactatc-aatgagttcttac-aaagagatac-aaagggttacaagaaattagctttgacaagttca 2171655  T
Q  100 ccatgaacaaaccctaatttctacc-cttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaac 190  Q
    | | |||| ||||||||||||||||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  ||||    
T  2171656 caaagaac-aaccctaatttctaccatttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaac 2171754  T
Q  191 ccaagagatactctaatcaaagaaccctaaaccctagag 229  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  2171755 ccaagagaaactctaatcaaag-accctaaaccctagag 2171792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 5406227 - 5406456
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  5406227 cctactctggaggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttca 5406324  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacc 191  Q
    | | |||||| |||||||||||||| |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  |||||    
T  5406325 caaagaacaa-ccctaatttctaccattttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacc 5406423  T
Q  192 caagagatactctaatcaaagaaccctaaacccta 226  Q
    | ||||| ||||||||||||| |||||||||||||    
T  5406424 cgagaga-actctaatcaaag-accctaaacccta 5406456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 5410552 - 5410781
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  5410552 cctactctggaggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttca 5410649  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacc 191  Q
    | | |||||| |||||||||||||| |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  |||||    
T  5410650 caaagaacaa-ccctaatttctaccattttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacc 5410748  T
Q  192 caagagatactctaatcaaagaaccctaaacccta 226  Q
    | ||||| ||||||||||||| |||||||||||||    
T  5410749 cgagaga-actctaatcaaag-accctaaacccta 5410781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 6097478 - 6097695
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| |           |||||||||||||| || ||||||||||    
T  6097478 cctactctggaggagagattgaactctccaatccactatcaa-tgagttcttacaaaagag-----------ttacaagaaattagatttgacaagttca 6097565  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagaga 198  Q
    | | |||||| || ||||||||||| |||| ||||||||||||| ||||||||||||| || ||   |||||||||| |||||||| | |||| ||||||    
T  6097566 caaagaacaatcc-taatttctaccatttttccaatctcaccaaaacactcaatgattttcactcaccaaggtgtttaccatgtttcccaaccaaagaga 6097664  T
Q  199 tactctaatcaaagaaccctaaaccctagag 229  Q
    |||||||||||||||||||||||||||||||    
T  6097665 tactctaatcaaagaaccctaaaccctagag 6097695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 30834563 - 30834794
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||||| ||||||||||||    
T  30834563 cctactctggaggagagattgaactctccaatccactatc-aatgagttctt-ccaaagagatacaaaagggttacaagaaattagctttgacaagttca 30834660  T
Q  100 ccatgaacaaaccctaatttctaccc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaa 189  Q
    | | |||| |||||||||||||||||  |||||||||||||||       ||||||||||||||||| || ||   | |||||||| | |||||| ||||    
T  30834661 caaagaac-aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccgaggtgtttacaatgtttctcaa 30834759  T
Q  190 cccaagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||||| ||||||||||||| ||| |||||||||    
T  30834760 cccaagaga-actctaatcaaag-accataaacccta 30834794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 5413421 - 5413650
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||| |||||||||     
T  5413421 cctactctggaggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcg 5413518  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacc 191  Q
    | | |||||| |||||||||||||| |||||||||||||||       ||||||||||||||||| || ||   ||| |||||| | ||||||  |||||    
T  5413519 caaagaacaa-ccctaatttctacctttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaatgtgtttacaatgtttcccaacc 5413617  T
Q  192 caagagatactctaatcaaagaaccctaaacccta 226  Q
    | ||||| ||||||||||||| |||||||||||||    
T  5413618 cgagaga-actctaatcaaag-accctaaacccta 5413650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 16452356 - 16452583
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||||| | |||| ||||  ||||||||||||||||||||| ||||||||||||    
T  16452356 cctactctggaggagagattgaactctccaatccactatc-aatgagttctt-ccaaagagatatgaaagggttacaagaaattagctttgacaagttca 16452453  T
Q  100 ccatgaacaaaccctaatttctaccc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaa 189  Q
    | | |||| |||||||||||||||||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | |||||| ||||    
T  16452454 caaagaac-aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttctcaa 16452552  T
Q  190 cccaagagatactctaatcaaagaaccctaaac 222  Q
    ||||||||| ||||||||||||| |||||||||    
T  16452553 cccaagaga-actctaatcaaag-accctaaac 16452583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 21589072 - 21588931
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||  ||||| |||    
T  21589072 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaattagcttcaacaagctca 21588975  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  21588974 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 21588931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 21593805 - 21593664
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||  ||||| |||    
T  21593805 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaattagcttcaacaagctca 21593708  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  21593707 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 21593664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 2972966 - 2973107
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||| ||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||  ||||| |||    
T  2972966 cctactcttgaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaattagcttcaacaagctca 2973063  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | ||||||| |||||||||||||| ||||||||||||||||||    
T  2973064 caaagaacaaa-cctaatttctacccattttcccaatctcaccaa 2973107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 143
Target Start/End: Original strand, 9183063 - 9183199
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatg 104  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||  |||| ||||| | |    
T  9183063 tctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaattagcttcaacaaattcacaaag 9183160  T
Q  105 aacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||| ||||||||||||||||| ||||| ||||||||||||    
T  9183161 aac-aaccctaatttctacccattttctcaatctcaccaa 9183199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 143
Target Start/End: Original strand, 33160384 - 33160521
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatg 104  Q
    ||||||||||||||||  ||||||||||||| ||||| |||||||||||||| | |||||||||| |||||||||||||||| ||||||||||||| | |    
T  33160384 tctggaggagagattgatctctccaatccaccatcaa-tgagttcttacaaa-gagatacaaaagagttacaagaaattagctttgacaagttcacaaag 33160481  T
Q  105 aacaaaccctaatttctacc--cttttcccaatctcaccaa 143  Q
    ||| ||| ||||||||||||   ||||||||||||||||||    
T  33160482 aac-aactctaatttctacctttttttcccaatctcaccaa 33160521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 3808735 - 3808877
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt-gacaagttc 98  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||| ||  ||||| ||    
T  3808735 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaaatgggttacaagaaattagtttcaacaagctc 3808832  T
Q  99 accatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 143  Q
    || | |||| ||||||||||||||||  ||||||||||||||||||    
T  3808833 acaaagaac-aaccctaatttctacctattttcccaatctcaccaa 3808877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 17758155 - 17758026
Alignment:
Q  10 gaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaaca 108  Q
    |||| |||||||  ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||| | ||||     
T  17758155 gaggggagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac- 17758059  T
Q  109 aaccctaatttctaccc-ttttcccaatctcac 140  Q
    ||||||||||||||||| |||||||||||||||    
T  17758058 aaccctaatttctacccattttcccaatctcac 17758026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 28137435 - 28137576
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| ||||  ||||||| ||||||||||||||||||||  ||||| |||    
T  28137435 cctactctgggggagagattgatctctccaatccactatc-aatgagttcttac-aaagaaatacaaatgggttacaagaaattagcttaaacaagctca 28137532  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| |||||||| |||||||||    
T  28137533 caaagaac-aaccctaatttctacccattttcccattctcaccaa 28137576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 3038930 - 3039071
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| |||||||||   |||||||||||||||| ||| ||||||||||||| | |||||||| ||||||||||||||||||||  | ||| |||    
T  3038930 cctaatctgggggagagattaatctctccaatccactattaaa-gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaaaaagctca 3039027  T
Q  100 ccatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 143  Q
    | |||||| ||||||||||||||||  ||||||||||||||||||    
T  3039028 caatgaac-aaccctaatttctaccaattttcccaatctcaccaa 3039071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 22424853 - 22424995
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gggttacaagaaattagctt-gacaagtt 97  Q
    |||| |||| |||||||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||  ||||||||||||||||||||  ||||| |    
T  22424853 cctactctgaaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaaatgggttacaagaaattagcttaaacaagct 22424949  T
Q  98 caccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||| | |||| ||||||||||||||||| |||| |||||||||||||    
T  22424950 cacaaagaac-aaccctaatttctacccatttttccaatctcaccaa 22424995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 143
Target Start/End: Complemental strand, 17763126 - 17762990
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatg 104  Q
    ||||||||||||||||  | ||||||||||||||| ||||||||||| |||||  |||||||| | ||||||||||||||||||  ||||| |||| | |    
T  17763126 tctggaggagagattgatcactccaatccactatc-aatgagttcttccaaaa-agatacaaatgagttacaagaaattagcttcaacaagctcacaaag 17763029  T
Q  105 aacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||| ||||||||||||||||| ||||| ||||||||||||    
T  17763028 aac-aaccctaatttctacccattttctcaatctcaccaa 17762990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 26830157 - 26830289
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaa 106  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| || |||||||||||||||||  ||||| |||| | |||    
T  26830157 tggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatggattacaagaaattagcttcaacaagctcacaaagaa 26830254  T
Q  107 caaaccctaatttctaccc-ttttcccaatctcacc 141  Q
    | ||| ||||||||||||| |||| |||||||||||    
T  26830255 c-aactctaatttctacccatttttccaatctcacc 26830289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 16569163 - 16568953
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttga-caagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||||| ||||||||||||||             ||||||||||||||||||| | |||| |||    
T  16569163 cctaatctggaggagagattgatctctccaatccactatcaa-tgagttcttacaaa-------------ggttacaagaaattagcttaaacaagctca 16569078  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaagacactcaatgattctctctt-tacaaggtgtttcccatgttttc-aacccaaga 196  Q
    | | ||||||| |||||||||||||| ||||| ||||||   ||||||||||||||||| || |||   |||||||||| | |||||| | |||||||||    
T  16569077 caaagaacaaaacctaatttctacccattttctcaatct---caagacactcaatgattttcacttacccaaggtgtttacaatgtttccaaacccaaga 16568981  T
Q  197 gatactctaatcaaagaaccctaaacccta 226  Q
    || ||||||||||||| ||||| |||||||    
T  16568980 ga-actctaatcaaag-acccttaacccta 16568953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 5043761 - 5043630
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaa 106  Q
    ||||||||||||||  |||||||||| |||||| ||||||||||||| |||| |||||||| | ||||||||||||||||||  ||||| |||| | |||    
T  5043761 tggaggagagattgatctctccaatctactatc-aatgagttcttac-aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaa 5043664  T
Q  107 caaaccctaatttctac-ccttttcccaatctcac 140  Q
    |||| |||||||||||| | ||||| |||||||||    
T  5043663 caaa-cctaatttctactcattttctcaatctcac 5043630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 26954324 - 26954450
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||| | | ||||||||||||||||||  ||||| |||| | |||| ||    
T  26954324 ggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacagatgagttacaagaaattagcttcaacaagctcacaaagaac-aa 26954420  T
Q  111 ccctaatttctacccttttcccaatctcac 140  Q
    ||||||||| ||||  ||||||||||||||    
T  26954421 ccctaatttataccaatttcccaatctcac 26954450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 4045542 - 4045423
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttga-caagttcaccatgaacaaaccctaatttcta 122  Q
    ||||||||||||||||||| |||||| ||   |||| |||| |||| | ||||||||||||||||| | |||| |||  | |||||||||||||||||||    
T  4045542 ctctccaatccactatcaa-tgagttatttacaaagagatataaaatgattacaagaaattagcttcaacaagctcataaagaacaaaccctaatttcta 4045444  T
Q  123 cccttttcccaatctcaccaa 143  Q
    || ||||||||||||| ||||    
T  4045443 ccattttcccaatctctccaa 4045423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5409096 - 5409167
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggtt 74  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  5409096 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaaagggtt 5409167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 33211212 - 33211353
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttga-caagttca 99  Q
    |||| ||||| ||||||||||  |||||||||||| ||| |||||||||||||| |||| |||||||| | | |||||||||||| ||| | |||| |||    
T  33211212 cctactctgggggagagattgatctctccaatccattat-aaatgagttcttac-aaagagatacaaatgagctacaagaaattaacttcatcaagctca 33211309  T
Q  100 ccatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 143  Q
    | | |||| |||| |||||||||||  ||||||||||||||||||    
T  33211310 caaagaac-aaccataatttctaccaattttcccaatctcaccaa 33211353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 26800728 - 26800642
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt 89  Q
    |||| ||||||||||||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||   ||||||||||||||||||    
T  26800728 cctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattagttacaagaaattagctt 26800642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 603126 - 603201
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    ||||||||||   ||||||||||||||||||  ||||||||||||| | |||||||| ||||||||||||||||||||    
T  603126 ggagagattgatttctccaatccactatcaac-gagttcttacaaa-gagatacaaatgggttacaagaaattagctt 603201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 25078262 - 25078023
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  25078262 cctactctggaggagagattgtactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttacaagaaattagcttgacaagttca 25078164  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25078163 ctatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 25078064  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25078063 actctaatcaaagaaccctaaaccctagagcttcccctttg 25078023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 25136231 - 25135992
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  25136231 cctactctggaggagagattgtactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttacaagaaattagcttgacaagttca 25136133  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25136132 ctatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 25136033  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25136032 actctaatcaaagaaccctaaaccctagagcttcccctttg 25135992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 10593399 - 10593161
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10593399 cctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacaagttcac 10593301  T
Q  101 catgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 200  Q
     |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10593300 tatgaacaaaccctaatttctacccttctcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagata 10593201  T
Q  201 ctctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  10593200 ctctaatcaaagaaccctaaaccctagagttccccctttg 10593161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 22536317 - 22536545
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcac 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22536317 cctactctggaggagagattgtactccccaatccactatcaaa-gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacaagttcac 22536414  T
Q  101 catgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||||||||||||||||    
T  22536415 aatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctc--tgcagggtgtttcccatgttttcaacccaagagata 22536512  T
Q  201 ctctaatcaaagaaccctaaaccctagagcttc 233  Q
    |||||||||||||||||||||||||||||||||    
T  22536513 ctctaatcaaagaaccctaaaccctagagcttc 22536545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 29751187 - 29751414
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || ||||||||||    
T  29751187 cctactctggaggagagattgtactctccaatccactatcaaa-gagttcttacaaaagggatacaaaagg-ttacaagaaattagatttgacaagttca 29751284  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  29751285 caatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagat 29751384  T
Q  200 actctaatcaaagaaccctaaaccctagag 229  Q
    ||||||||||||||||||||||||||||||    
T  29751385 actctaatcaaagaaccctaaaccctagag 29751414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 16546772 - 16546534
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| ||||    
T  16546772 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttacaagaaattagcttgacaatgttc 16546674  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  16546673 actatgaacaaaccctaatttctacccctttcctaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaga 16546576  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16546575 tactctaatcaaagaaccctaaaccctagagcttcccctttg 16546534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 29722665 - 29722438
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || ||||||||||    
T  29722665 cctactctggaggagagattgtactctccaatccactatcaaa-gagttcttacaaaagggatacaaaagg-ttacaagaaattagattagacaagttca 29722568  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  29722567 caatgaactaaccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagat 29722468  T
Q  200 actctaatcaaagaaccctaaaccctagag 229  Q
    ||||||||||||||||||||||||||||||    
T  29722467 actctaatcaaagaaccctaaaccctagag 29722438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 40380232 - 40379995
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  40380232 cctactctggaggagagtttgaactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttacaagaaattagtttgacaagttca 40380134  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  40380133 ctatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccgagagat 40380036  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  40380035 actctaatcaaagaaccctaaaccctagagcttcccctttg 40379995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 40382443 - 40382206
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  40382443 cctactctggaggagagtttgaactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttacaagaaattagcttgacaagttca 40382345  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  40382344 ctatgaacaaaccctaacttctacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccgagagat 40382247  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  40382246 actctaatcaaagaaccctaaaccctagagcttcccctttg 40382206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 16544550 - 16544312
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||  ||||||||||||||||| ||||    
T  16544550 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttatgagaaattagcttgacaatgttc 16544452  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  16544451 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaga 16544354  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16544353 tactctaatcaaagaaccctaaaccctagagcttcccctttg 16544312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 29720505 - 29720278
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || ||||||||||    
T  29720505 cctactctagaggagagattgtactctccaatccactatcaaa-gagttcttacaaaagggatacaaaagg-ttacaagaaattagattagacaagttca 29720408  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  29720407 caatgaactaaccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagat 29720308  T
Q  200 actctaatcaaagaaccctaaaccctagag 229  Q
    ||||||||||||||||||||||||||||||    
T  29720307 actctaatcaaagaaccctaaaccctagag 29720278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 9789251 - 9789478
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||    
T  9789251 cctactctggaggagagattgaactctccaatccactatcaa-tgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttca 9789349  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagaga 198  Q
    | | |||||| || |||||||||||||||| ||||||||||||||||||||||||||| || ||   |||||||||||||||||||  ||||||||||||    
T  9789350 caaggaacaa-ccttaatttctaccctttttccaatctcaccaagacactcaatgattttcactcaccaaggtgtttcccatgtttcccaacccaagaga 9789448  T
Q  199 tactctaatcaaagaaccctaaaccctagag 229  Q
      |||||||||||| || |||||||||||||    
T  9789449 agctctaatcaaag-actctaaaccctagag 9789478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 16409616 - 16409389
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||    
T  16409616 cctactctggaggagagattgaactctccaatccactatcaa-tgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttca 16409518  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagaga 198  Q
    | | |||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || ||   |||||||||| ||||||||  ||||||||||||    
T  16409517 caaagaacaa-ccctaatttctaccctttttccaatctcaccaagacactcaatgattttcactcaccaaggtgtttaccatgtttcccaacccaagaga 16409419  T
Q  199 tactctaatcaaagaaccctaaaccctagag 229  Q
      |||||||||||| || |||||||||||||    
T  16409418 agctctaatcaaag-actctaaaccctagag 16409389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 18441675 - 18441902
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||| |||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||    
T  18441675 cctactctagaggagagattgaactctccaatccactatcaa-tgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttca 18441773  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagaga 198  Q
    | | |||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || ||   |||||||||||||||||||  ||||||||||||    
T  18441774 caaggaacaa-ccctaatttctaccctttttccaatctcaccaagacactcaatgattttcactcaccaaggtgtttcccatgtttcccaacccaagaga 18441872  T
Q  199 tactctaatcaaagaaccctaaaccctagag 229  Q
      |||||||||||| || |||||||||||||    
T  18441873 agctctaatcaaag-actctaaaccctagag 18441902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 26178023 - 26177797
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattag-cttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||  ||||||||||||    
T  26178023 cctactctggaggagagattgaactctccaatccactatcaa-tgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttca 26177925  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagaga 198  Q
    | | |||| ||||||||||||||||||||| ||||||||||||||||||||||||||| || ||   |||||||||| ||||||||  ||||||||||||    
T  26177924 caaagaac-aaccctaatttctaccctttt-ccaatctcaccaagacactcaatgattttcactcaccaaggtgtttaccatgtttcccaacccaagaga 26177827  T
Q  199 tactctaatcaaagaaccctaaaccctagag 229  Q
      |||||||||||| || |||||||||||||    
T  26177826 agctctaatcaaag-actctaaaccctagag 26177797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 25412901 - 25412672
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  25412901 cctactctggaggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttca 25412804  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacc 191  Q
    | | |||||| ||||||||||||||||||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  |||||    
T  25412803 caaagaacaa-ccctaatttctacccttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacc 25412705  T
Q  192 caagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||| ||||||||||||| |||||||||||||    
T  25412704 caagaga-actctaatcaaag-accctaaacccta 25412672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 13343201 - 13342971
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||   |||| ||||||||||| ||||||||||||||| ||||||||||||    
T  13343201 cctactctggaggagagattgaactctccaatccactatc-aatgagttctt--caaagagatacaaaaggattacaagaaattagctttgacaagttca 13343105  T
Q  100 ccatgaacaaaccctaatttctaccc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaa 189  Q
    | | |||| |||||||||||||||||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  |||    
T  13343104 caaagaac-aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaa 13343006  T
Q  190 cccaagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||||| |||||||||| || |||||||||||||    
T  13343005 cccaagaga-actctaatcagag-accctaaacccta 13342971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 6 - 226
Target Start/End: Complemental strand, 30182724 - 30182499
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatg 104  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||| | |||| |||| |||||||||||||||||||||| ||||||||||||| | |    
T  30182724 tctggaggagagattgaactctccaatccactatc-aatgagttctt-ccaaagagatagaaaagggttacaagaaattagctttgacaagttcacaaag 30182627  T
Q  105 aacaaaccctaatttctacc-cttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaag 195  Q
    ||| ||||||||||||||||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  |||||||||    
T  30182626 aac-aaccctaatttctaccatttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttgcaatgtttcccaacccaag 30182528  T
Q  196 agatactctaatcaaagaaccctaaacccta 226  Q
    ||| ||||||||||||| ||||||| |||||    
T  30182527 aga-actctaatcaaag-accctaatcccta 30182499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 26170903 - 26170688
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| |           |||||||||||||| || ||||||||||    
T  26170903 cctactctggaggagagattgaactctccaatccactatcaa-tgagttcttacaaaagag-----------ttacaagaaattagatttgacaagttca 26170816  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagaga 198  Q
    | | |||||| || |||||||||||||||||| ||||||||||||||||||||||||| || ||   |||||||||| ||||||||  ||||||||||||    
T  26170815 caaagaacaatcc-taatttctacccttttcc-aatctcaccaagacactcaatgattttcactcaccaaggtgtttaccatgtttcccaacccaagaga 26170718  T
Q  199 tactctaatcaaagaaccctaaaccctagag 229  Q
      || ||||||||| || |||||||||||||    
T  26170717 agctgtaatcaaag-actctaaaccctagag 26170688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 226
Target Start/End: Original strand, 36074077 - 36074302
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaa 106  Q
    |||||||||||||| |||||||||||||||||| |||||||||||   |||| |||||||||| |||||||||||||||| ||||||||||| | | |||    
T  36074077 tggaggagagattgaactctccaatccactatc-aatgagttctt--caaagagatacaaaagagttacaagaaattagctttgacaagttcgcaaagaa 36074173  T
Q  107 caaaccctaatttctaccc----ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaa 194  Q
    | |||||||||||||||||    |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  ||||||||    
T  36074174 c-aaccctaatttctacccttttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaa 36074272  T
Q  195 gagatactctaatcaaagaaccctaaacccta 226  Q
    |||| ||||||||||||| |||||||||||||    
T  36074273 gaga-actctaatcaaag-accctaaacccta 36074302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 13239892 - 13239674
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||  |||||||||    
T  13239892 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaaagagttacaagaaattagcttcaacaagttca 13239795  T
Q  100 ccatgaacaaaccctaatttctacc-cttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaac 190  Q
    | | ||| |||||||||||||||||  |||| ||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  ||||    
T  13239794 caaagaa-aaaccctaatttctaccattttttccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaac 13239696  T
Q  191 ccaagagatactctaatcaaaga 213  Q
    |||||||| ||||||||||||||    
T  13239695 ccaagaga-actctaatcaaaga 13239674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 32636965 - 32636824
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| ||||| ||||||||||  |||||||||||||||||||| |||||||||| |||| |||||||| |||||||||||||||||| ||||||||||||    
T  32636965 cctaatctgggggagagattgatctctccaatccactatcaaa-gagttcttac-aaagagatacaaatgggttacaagaaattagctttgacaagttca 32636868  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| |||| |||||||||||| ||||||||||||||||||    
T  32636867 caaagaac-aaccataatttctacccattttcccaatctcaccaa 32636824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 213599 - 213465
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaa 106  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||| || ||||| |||| | |||    
T  213599 tggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaattagctttaacaagctcacaaagaa 213502  T
Q  107 caaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | ||||||||||||||||| ||||||||||||||||||    
T  213501 c-aaccctaatttctacccattttcccaatctcaccaa 213465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 40147402 - 40147261
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| | ||||||||||||||||||  ||||| |||    
T  40147402 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgagttacaagaaattagcttcaacaagctca 40147305  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  40147304 cgaagaac-aaccctaatttctacccattttcccaatctcaccaa 40147261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 13488333 - 13488203
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  |||||||||| | |||| ||    
T  13488333 ggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aa 13488237  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| |||||||||||| |||||    
T  13488236 ccctaatttctacccattttcccaatcttaccaa 13488203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 42428468 - 42428598
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  |||||||||| | ||| |||    
T  42428468 ggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaa-aaa 42428564  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    || |||||||||||| ||||||||||||||||||    
T  42428565 ccataatttctacccattttcccaatctcaccaa 42428598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 28278457 - 28278316
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| |||||||| |||| |||| |||||||| ||||||||||||||||||||  ||||| |||    
T  28278457 cctactctggaggagagattgatctctccaatccactatc-aatgagtttttac-aaagagatacaaatgggttacaagaaattagcttcaacaagctca 28278360  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| |||| |||||||||||| ||||||||||||||||||    
T  28278359 caaagaac-aaccataatttctacccattttcccaatctcaccaa 28278316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 37439282 - 37439161
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||| | ||||||||||||    
T  37439282 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaaagagttacaagaaattaactttgacaagttca 37439185  T
Q  100 ccatgaacaaaccctaatttctacc 124  Q
    | | |||| ||||||||||||||||    
T  37439184 caaagaac-aaccctaatttctacc 37439161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 39468587 - 39468714
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||| ||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  |||||||||| | |||| ||    
T  39468587 ggagagattgatctctctaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aa 39468683  T
Q  111 ccctaatttctaccc-ttttcccaatctcac 140  Q
    ||||||||||||||| |||||||||||||||    
T  39468684 ccctaatttctacccattttcccaatctcac 39468714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 13695740 - 13695859
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttga-caagttcaccatgaacaaaccctaatttcta 122  Q
    ||||| |||||||||| || |||||||||   |||| ||||||||||||||||||||||||||||| | |||| |||| | |||||||||||||||| ||    
T  13695740 ctctctaatccactattaa-tgagttctttacaaagagatacaaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttgta 13695838  T
Q  123 cccttttcccaatctcaccaa 143  Q
    |||||||||||||||| ||||    
T  13695839 cccttttcccaatctctccaa 13695859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 30682949 - 30683178
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagt--tcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagtt 97  Q
    |||| ||||| ||||||||||  ||||||||||||||||||| |||||  ||||||||| |  ||||||||||||||||||||||||||||  |||||||    
T  30682949 cctaatctgggggagagattgatctctccaatccactatcaa-tgagtattcttacaaa-gaaatacaaaagggttacaagaaattagcttcaacaagtt 30683046  T
Q  98 caccatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tca 188  Q
    |||    ||  ||||||||||||||||| |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  ||    
T  30683047 cac----aaagaaccctaatttctaccctttttcccaatctcacaaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcgca 30683142  T
Q  189 acccaagagatactctaatcaaagaaccctaaacccta 226  Q
    |||||||||| ||||||||||||| ||||| |||||||    
T  30683143 acccaagaga-actctaatcaaag-accctcaacccta 30683178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 42426273 - 42426403
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||| ||||||||||||||  |||| ||||| | |||| ||    
T  42426273 ggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttgcaagaaattagcttcaacaatttcacaaagaac-aa 42426369  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| ||||| ||||||||||||    
T  42426370 ccctaatttctacccattttctcaatctcaccaa 42426403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 28750682 - 28750823
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| |||||||||||||||||  |||||||| |||||||| ||||||| |||  |||| ||||    
T  28750682 cctaatctgggggagagattgatctctccaatccactatc-aatgagttcttacaaaa-agatacaaatgggttacaggaaattaacttcaacaatttca 28750779  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
      | |||| ||||||||||||||||| ||||||||||||||||||    
T  28750780 taaagaac-aaccctaatttctacccattttcccaatctcaccaa 28750823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 33831810 - 33831590
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  |||| |||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||| | |||||||    
T  33831810 ggagagattgatctcttcaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa 33831713  T
Q  111 ccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctctct-ttacaaggtgtttcccatgtttt-caacccaagagata 200  Q
     |||||||||||||| |||| ||||||||||        |||||||||||||||| || ||    |||||||||| | ||||||| |||||||||||| |    
T  33831712 -cctaatttctacccatttttccaatctcacaaatgaataagacactcaatgattttcactcacccaaggtgtttacaatgttttccaacccaagaga-a 33831615  T
Q  201 ctctaatcaaagaaccctaaacccta 226  Q
    |||||||||||| ||||| |||||||    
T  33831614 ctctaatcaaag-acccttaacccta 33831590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 533899 - 533769
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  || |||||||||||||| ||||||||||||| |||| |||||||| ||||||||| ||||||||||  ||||| |||| | | || ||    
T  533899 ggagagattgatctttccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaaaaaattagcttcaacaagctcacaaag-accaa 533803  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| ||||||||||||||||||    
T  533802 ccctaatttctacccattttcccaatctcaccaa 533769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 5058186 - 5058047
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||| ||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||| ||||||||| ||||||  ||||| |||    
T  5058186 cctactctagaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggatacaagaaaatagcttcaacaagctca 5058089  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    |   |||| ||||||||||||||||| ||||||||||||||||||    
T  5058088 c--agaac-aaccctaatttctacccattttcccaatctcaccaa 5058047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 8565985 - 8566111
Alignment:
Q  13 gagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaac 111  Q
    |||||||||  ||||||||||||||||||| |||||||||||| | |||||||||| ||||||||||||||||||||  ||||| |||| | |||||||     
T  8565985 gagagattgatctctccaatccactatcaa-tgagttcttacaga-gggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa- 8566081  T
Q  112 cctaatttctaccc-ttttcccaatctcac 140  Q
    ||||| |||||||| ||||| |||||||||    
T  8566082 cctaagttctacccattttctcaatctcac 8566111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 16452221 - 16452003
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| |||||||||   |||||||||||||||| || |||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||    
T  16452221 cctactctgggggagagatttatctctccaatccactatgaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctca 16452124  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctc-------accaagacactcaatgattctctctttacaaggtgtttcccatgttttc-aac 190  Q
      | ||||||| | |||||||||||| |||| ||||||||       | ||||||||||||||||| || |||  |||||||||| | |||||| | |||    
T  16452123 gaaagaacaaa-cttaatttctacccatttttccaatctcatcaatgaacaagacactcaatgattgtcacttaccaaggtgtttacaatgtttccgaac 16452025  T
Q  191 ccaagagatactctaatcaaaga 213  Q
    |||||||| ||||||||||||||    
T  16452024 ccaagaga-actctaatcaaaga 16452003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 538155 - 538028
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  |||||||||| |||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||| | || | ||    
T  538155 ggagagattgatctctccaatctactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagagc-aa 538059  T
Q  111 ccctaatttctaccc-ttttcccaatctcac 140  Q
    || |||||||||||| |||||||||||||||    
T  538058 ccttaatttctacccattttcccaatctcac 538028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 27637640 - 27637781
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt-gacaagttc 98  Q
    |||| |||| |||||||||||  ||||||||||||||||  ||||||||||||| |||| ||||||||| ||||||||||||||||| ||  ||||| ||    
T  27637640 cctactctgcaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaatgggttacaagaaattagtttaaacaagctc 27637736  T
Q  99 accatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    |  | |||| ||||||||||||||||| ||||| ||||||||||||    
T  27637737 ataaagaac-aaccctaatttctacccattttctcaatctcaccaa 27637781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 38747135 - 38747009
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||| ||||||| |||||| || |||| | |||||||| ||||||||||||||||||||  ||||| |||| | |||| ||    
T  38747135 ggagagattgatctctccaatcctctatcaa-tgagtttttccaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aa 38747039  T
Q  111 ccctaatttctaccc-ttttcccaatctca 139  Q
    ||||||||||||||| ||||||||||||||    
T  38747038 ccctaatttctacccattttcccaatctca 38747009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 9049392 - 9049506
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    |||||||||||||| |||| |||||||||||||| | ||||||||| |||||||||||||||||||  ||||| ||| ||  ||||||| ||||||||||    
T  9049392 ctctccaatccactgtcaa-tgagttcttacaaa-gagatacaaaatggttacaagaaattagcttcaacaagctca-caaaaacaaacactaatttcta 9049488  T
Q  123 cccttttcccaatctcac 140  Q
     | ||||||||| |||||    
T  9049489 tcattttcccaaactcac 9049506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 16640967 - 16641091
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||||    ||||||||| |||| |||||||||| ||||  |||||| |||||  ||||| |||    
T  16640967 cctactctggaggagagattgatctctccaatccactatca----agttcttac-aaagagatacaaaagagttatcagaaatcagcttcaacaagctca 16641061  T
Q  100 ccatgaacaaaccctaatttctaccctttt 129  Q
    | | |||||||| |||||||||||| ||||    
T  16641062 caaagaacaaacactaatttctaccatttt 16641091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 316893 - 316769
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  | |||| ||||| |||||| |||||||||   |||| ||||||||||| |||||||||||||||||  ||||| || ||| |||||||    
T  316893 ggagagattgatccctccgatccattatcaa-tgagttctttacaaagagatacaaaaggattacaagaaattagcttcaacaagctctccaagaacaaa 316795  T
Q  111 ccctaatttctacccttttcccaatct 137  Q
     ||||||||||||| ||||| ||||||    
T  316794 -cctaatttctacctttttctcaatct 316769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 3075696 - 3075823
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttga-caagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||| |||||||||  || ||||||||||| | ||||||| ||||||||||||||||| || | |||| |||| | |||||||    
T  3075696 ggagagattgatctctccaattcactatcaac-gaattcttacaaaaag-atacaaatgggttacaagaaattagattcagcaagctcacaaagaacaaa 3075793  T
Q  111 ccctaatttctacc-cttttcccaatctcac 140  Q
     |||||||||||||  ||||| |||||||||    
T  3075794 -cctaatttctacctattttctcaatctcac 3075823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 226
Target Start/End: Complemental strand, 31183089 - 31182883
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    |||||||||||| |||||| ||||||||||| |||||||||| ||| ||||||||||||||| |||  ||||  |||| | |||| || |||||||||||    
T  31183089 ctctccaatccagtatcaa-tgagttcttac-aaagggatac-aaatggttacaagaaattaacttaaacaaactcacaaagaac-aatcctaatttcta 31182994  T
Q  123 cccttttcccaatctcac-------caagacactcaatgattctctctttac-aaggtgtttcccatgttt-tcaacccaagagatactctaatcaaaga 213  Q
    ||| ||| ||||||||||       ||||||||||||||||| || ||   | ||||||||| | ||||||  |||||||||||| |||||||||||||     
T  31182993 cccattttccaatctcacaaatgaacaagacactcaatgattttcactcacctaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag- 31182896  T
Q  214 accctaaacccta 226  Q
    ||||| |||||||    
T  31182895 accctcaacccta 31182883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 42309973 - 42310048
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    ||||||||||  ||| | ||||||||||||| | |||||||||||| | |||||||||| ||||||||||||||||||    
T  42309973 ggagagattgatctcgctaatccactatcaa-taagttcttacaaa-gagatacaaaagagttacaagaaattagctt 42310048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 27015664 - 27015531
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||||| ||||||||||||||  || | |||||||||||| ||||||||||||| |||| |||||||| ||||        ||||||||  |||||||||    
T  27015664 cctattttggaggagagattgatctgtacaatccactatc-aatgagttcttac-aaagagatacaaatgggt--------attagcttcaacaagttca 27015575  T
Q  100 ccatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||  ||||||||||||||||||    
T  27015574 caaagaac-aaccctaatttctacctattttcccaatctcaccaa 27015531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 42926970 - 42926922
Alignment:
Q  40 caaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    |||||||||||||||||| | |||||||| | ||||||||||||||||||    
T  42926970 caaatgagttcttacaaa-gagatacaaatgagttacaagaaattagctt 42926922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 8395744 - 8395508
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  8395744 cctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacatgttcac 8395646  T
Q  101 catgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  8395645 tatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagata 8395548  T
Q  201 ctctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8395547 ctctaatcaaagaaccctaaaccctagagcttcccctttg 8395508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 8393535 - 8393299
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  8393535 cctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacatgttcac 8393437  T
Q  101 catgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  8393436 tatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagata 8393339  T
Q  201 ctctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  8393338 ctctaatcaaagaaccataaaccctagagcttcccctttg 8393299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 7125043 - 7124804
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||| ||||||||||||    
T  7125043 cctactctggaggagagattgtactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagtttgacaagttca 7124945  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7124944 ctatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 7124845  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7124844 actctaatcaaagaaccctaaaccctagagcttcccctttg 7124804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 7122817 - 7122585
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttcaccatgaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||| ||||||||||||| |||||    
T  7122817 tggaggagagattgtactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagtttgacaagttcactatgaa 7122719  T
Q  107 caaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaa 206  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7122718 caaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaa 7122619  T
Q  207 tcaaagaaccctaaaccctagagcttcccctttg 240  Q
    ||||||||||||||||||||||||||||||||||    
T  7122618 tcaaagaaccctaaaccctagagcttcccctttg 7122585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 5138431 - 5138193
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  5138431 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacaatgttc 5138333  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  5138332 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtatttcccatgttttcaacccaagaga 5138235  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5138234 tactctaatcaaagaaccctaaaccctagagcttcccctttg 5138193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 5136206 - 5135967
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  5136206 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacaatgttc 5136108  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatg-ttttcaacccaagag 197  Q
    || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| |||||||||||||||    
T  5136107 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtatttcccatgtttttcaacccaagag 5136010  T
Q  198 atactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5136009 atactctaatcaaagaaccctaaaccctagagcttcccctttg 5135967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 31495343 - 31495556
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagg-gttacaagaaattagctt-gacaagttc 98  Q
    |||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||||| ||||||||| | ||||||||||||||| || |||||||||    
T  31495343 cctactctggaggagagattgaactctccaatcaactatcaa-tgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttc 31495441  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagag 197  Q
    || |||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||  |||||||||||    
T  31495442 acaatgaacaatcc-taatttctacccttttcccaatctcaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagag 31495540  T
Q  198 atactctaatcaaaga 213  Q
    |  |||||||||||||    
T  31495541 aagctctaatcaaaga 31495556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 13992320 - 13992544
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattag-cttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||||  ||| |||||||||| |||||||||||||||  ||||||||||||    
T  13992320 cctactctggaggagagattgaactctccaatccactatc-aatgagttcttac--aagagatacaaaagagttacaagaaattagatttgacaagttca 13992416  T
Q  100 ccatgaacaaaccctaatttctaccc--ttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaaga 196  Q
    | | |||| |||||||||||||||||  |||||||||||||||||||||||||||||||| || ||   |||||||||| | ||||||  ||||||||||    
T  13992417 caaagaac-aaccctaatttctacccttttttcccaatctcaccaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaaga 13992515  T
Q  197 gatactctaatcaaagaaccctaaacccta 226  Q
    || ||||||||||||| |||||||||||||    
T  13992516 gagactctaatcaaag-accctaaacccta 13992544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 29999833 - 30000063
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||||| |||||||||||||||  |||||||||| |||||||||||||||| |||||| |||||    
T  29999833 cctactctggaggagagattgatctctccaatccactatcaa-tgagttcttacaaaaaagatacaaaagagttacaagaaattagctttgacatgttca 29999931  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttttc-aacc 191  Q
    | | |||| ||||||||||||||||||||||||||||||||       |||||||||||| |||| || ||   |||||||||| | |||||| | ||||    
T  29999932 caaagaac-aaccctaatttctacccttttcccaatctcaccaatgaacaagacactcaacgattttcactcaccaaggtgtttacaatgtttccaaacc 30000030  T
Q  192 caagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||| ||||||||||||| |||||||||||||    
T  30000031 caagaga-actctaatcaaag-accctaaacccta 30000063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 56178664 - 56178882
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||  |||||||||    
T  56178664 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaaagggttacaagaaattagcttcaacaagttca 56178761  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaac 190  Q
    | | |||| ||||||||||||||||| |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  ||||    
T  56178762 caaagaac-aaccctaatttctaccctttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaac 56178860  T
Q  191 ccaagagatactctaatcaaaga 213  Q
    |||||||| ||||||||||||||    
T  56178861 ccaagaga-actctaatcaaaga 56178882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 52095389 - 52095530
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| ||||||||||||||||  |||||||||||||||||||| || ||||||| |||| |||||||| |||||||||||||||||| ||||||||||||    
T  52095389 cctactctggaggagagattgatctctccaatccactatcaaa-gatttcttac-aaagagatacaaatgggttacaagaaattagctttgacaagttca 52095486  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  52095487 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 52095530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 9927485 - 9927626
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||  |||||||||    
T  9927485 cctaatctgggggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaattagcttcaacaagttca 9927582  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  9927583 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 9927626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 48143184 - 48143042
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||   ||| |||||||||||||||||||||||||||||  |||||||||    
T  48143184 cctactctggaggagagattgatctctccaatccactatc-aatgagttctta-tgaagagatacaaaagggttacaagaaattagcttcaacaagttca 48143087  T
Q  100 ccatgaacaaaccctaatttctacc--cttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||   ||||||||||||||||||    
T  48143086 caaagaac-aaccctaatttctacctttttttcccaatctcaccaa 48143042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 36994654 - 36994524
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||  ||||| |||| | |||| ||    
T  36994654 ggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aa 36994558  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    || |||||||||||| ||||||||||||||||||    
T  36994557 ccttaatttctacccattttcccaatctcaccaa 36994524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 41964557 - 41964415
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt-gacaagttc 98  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||| ||||||||||  ||||| ||    
T  41964557 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagggatacaaaatgggttacaataaattagcttaaacaagctc 41964460  T
Q  99 accatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    || | |||| ||||||||||||||||| |||||||||| |||||||    
T  41964459 acaaagaac-aaccctaatttctacccattttcccaatttcaccaa 41964415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 46703642 - 46703500
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt-gacaagttc 98  Q
    |||| ||||||||||||||||  |||||||||||||||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||  ||||| ||    
T  46703642 cctactctggaggagagattgatctctccaatccactat-aaatgagttcttac-aaagagatacaaaatgggttacaagaaattagcttaaacaagctc 46703545  T
Q  99 accatgaacaaaccctaatttctac-ccttttcccaatctcaccaa 143  Q
    || | |||| ||||||||||||||| | ||||||||||||||||||    
T  46703544 acaaagaac-aaccctaatttctactcattttcccaatctcaccaa 46703500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 4588100 - 4587958
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||||| ||| ||||||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||  ||||| | |    
T  4588100 cctattatgggggagagattgttctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagcttcaacaagctta 4588003  T
Q  100 ccatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 143  Q
    | | ||||||| | |||||||||||  |||||||||| |||||||    
T  4588002 caaagaacaaatcttaatttctaccttttttcccaatttcaccaa 4587958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 8665549 - 8665408
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||  ||||| ||     
T  8665549 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaattagcttcaacaagctct 8665452  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| |||||||| |||||||||    
T  8665451 caaagaac-aaccctaatttctacccattttcccattctcaccaa 8665408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 12739577 - 12739718
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||| ||| |||  |||||||| |||||||||||||||||| ||||||||||||    
T  12739577 cctaatctgggggagagattgatctctccaatccactatc-aatgagttcatac-aaatagatacaaatgggttacaagaaattagctttgacaagttca 12739674  T
Q  100 ccatgaacaaaccctaatttcta-cccttttcccaatctcaccaa 143  Q
    | | |||| |||||||||||||| || ||||||||||||||||||    
T  12739675 caaagaac-aaccctaatttctatccattttcccaatctcaccaa 12739718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 26364377 - 26364236
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||  ||||||||||||| |||| |||||||| | ||||||||||||||||||  |||||||||    
T  26364377 cctaatctgggggagagattgatctctccaatccactat-taatgagttcttac-aaagagatacaaatgagttacaagaaattagcttcaacaagttca 26364280  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  26364279 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 26364236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 34570441 - 34570582
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||  ||||||||||||||||||||  |||||||||    
T  34570441 cctaatctgggggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaattgggttacaagaaattagcttcaacaagttca 34570538  T
Q  100 ccatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||  ||||||||||||||||||    
T  34570539 caaagaac-aaccctaatttctacctattttcccaatctcaccaa 34570582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 226
Target Start/End: Complemental strand, 37740761 - 37740536
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatg 104  Q
    ||||| ||||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  |||||||||| | |    
T  37740761 tctgggggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaag 37740664  T
Q  105 aacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaag 195  Q
    ||| ||||||||||| ||||| |||||| ||||||||       ||||||||||| ||||| || ||   |||||||||| | ||||||  |||||||||    
T  37740663 aac-aaccctaatttataccctttttccaaatctcaccaatgaacaagacactcagtgattttcactcaccaaggtgtttacaatgtttcccaacccaag 37740565  T
Q  196 agatactctaatcaaagaaccctaaacccta 226  Q
    ||| ||||||||||||| ||||| |||||||    
T  37740564 aga-actctaatcaaag-accctcaacccta 37740536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 143
Target Start/End: Complemental strand, 54883156 - 54883020
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatg 104  Q
    ||||||||||||||||  | ||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||| |      
T  54883156 tctggaggagagattgatccctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaaa 54883059  T
Q  105 aacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||| ||||||||||||||||| ||||||||||||||||||    
T  54883058 aac-aaccctaatttctacccattttcccaatctcaccaa 54883020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 5370110 - 5370232
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc--ttgacaagttc 98  Q
    |||| ||||||||||||||||  ||||| | ||||||||||| |||||||||||||| | |||||||||||||||||||||||||||  |||||||||||    
T  5370110 cctactctggaggagagattgatctctctagtccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagcttttgacaagttc 5370207  T
Q  99 accatgaacaaaccctaatttctacc 124  Q
    || | |||| ||||||||||||||||    
T  5370208 acaaagaac-aaccctaatttctacc 5370232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 379521 - 379383
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||| ||||||||| |||| |||||||| ||||||||||||||||||||  ||||| |||    
T  379521 cctactctggaggagagattgatctctccaatccactatc-aattagttcttac-aaagcgatacaaatgggttacaagaaattagcttcaacaagctca 379424  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcac 140  Q
    | | ||||||| |||||||||||||| ||||| |||||||||    
T  379423 caaagaacaaa-cctaatttctacccattttctcaatctcac 379383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 2209855 - 2209717
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt-gacaagttc 98  Q
    |||| |||||||||||||||   ||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||||  ||||| ||    
T  2209855 cctactctggaggagagattaatctctccaatccactatc-aatgagttcttac-aaagagatacaaaatgggttacaagaaattagcttcaacaagctc 2209758  T
Q  99 accatgaacaaaccctaatttctaccc-ttttcccaatctca 139  Q
    || | ||| |||||||||||||||||| ||||||||||||||    
T  2209757 acaaagaa-aaaccctaatttctacccattttcccaatctca 2209717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 12743963 - 12744073
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| |||||||||||||||||| ||||||||||||| | |||| ||    
T  12743963 ggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aa 12744059  T
Q  111 ccctaatttctacc 124  Q
    ||||||||||||||    
T  12744060 ccctaatttctacc 12744073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 12745352 - 12745462
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| |||||||||||||||||| ||||||||||||| | |||| ||    
T  12745352 ggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aa 12745448  T
Q  111 ccctaatttctacc 124  Q
    ||||||||||||||    
T  12745449 ccctaatttctacc 12745462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 12747794 - 12747924
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| ||||||| ||||||  | ||||||| |||||||||||||||||| ||||||||||||| | |||| ||    
T  12747794 ggagagattgatctctccaatccactatcaa-tgagttcatacaaatag-atacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aa 12747890  T
Q  111 ccctaatttcta-cccttttcccaatctcaccaa 143  Q
    |||||||||||| || ||||||||||||||||||    
T  12747891 ccctaatttctatccattttcccaatctcaccaa 12747924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 12073533 - 12073392
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||| |||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| | ||||||| ||||||||||  ||||| |||    
T  12073533 cctactctggaagagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgagttacaataaattagcttcaacaagctca 12073436  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | ||||||| |||||||||||||| ||||||||||||||||||    
T  12073435 caaagaacaaa-cctaatttctacccattttcccaatctcaccaa 12073392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 12744078 - 12744195
Alignment:
Q  5 ttctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccat 103  Q
    |||||| | ||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| |||||||||||||||||| ||||||||||||| |     
T  12744078 ttctggggaagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaa 12744175  T
Q  104 gaacaaaccctaatttctacc 124  Q
    |||| ||||||||||||||||    
T  12744176 gaac-aaccctaatttctacc 12744195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 12745467 - 12745604
Alignment:
Q  5 ttctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattag-cttgacaagttcaccat 103  Q
    |||||| | ||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| |||||||||||||||||  ||||||||||||| |     
T  12745467 ttctggggaagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagttttgacaagttcacaaa 12745564  T
Q  104 gaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    |||| ||||||||||||||||| |||||| |||||| ||||    
T  12745565 gaac-aaccctaatttctacccattttcctaatctcgccaa 12745604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 26175663 - 26175804
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||| ||  ||||| |||    
T  26175663 cctaatctgggggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaattagtttcaacaagctca 26175760  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||| ||| ||||||||||||||||||    
T  26175761 caaagaac-aaccctaatttctccccattttcccaatctcaccaa 26175804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 36463416 - 36463557
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  |||||||||||||| ||||| ||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||    
T  36463416 cctaatctgggggagagattgatctctccaatccactgtcaaa-gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctca 36463513  T
Q  100 ccatgaacaaaccctaatttcta-cccttttcccaatctcaccaa 143  Q
    | |||||| | |||||||||||| || ||||||||||||||||||    
T  36463514 caatgaac-agccctaatttctatccattttcccaatctcaccaa 36463557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 41639567 - 41639426
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  |||||||||||||||||  |||||||||||| |||  |||||||| ||||||||||||||||||||  | |||||||    
T  41639567 cctactctggaggagagattgatctctccaatccactatc-gatgagttcttac-aaatagatacaaatgggttacaagaaattagcttcaaaaagttca 41639470  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| |||||||||||| |||||    
T  41639469 caaagaac-aaccctaatttctacccattttcccaatcttaccaa 41639426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 54199933 - 54200074
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||| ||  ||||| ||| ||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  |||||||||    
T  54199933 cctaatctgggggagagaatgatctctctaattcactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttca 54200030  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  54200031 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 54200074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 12119670 - 12119540
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  |||||||||||||||| ||||||||||||   |||| |||||||||||||||||||||||||||||  | |||||||| | |||||||    
T  12119670 ggagagattgatctctccaatccactat-aaatgagttctttacaaagagatacaaaagggttacaagaaattagcttcaaaaagttcacaaagaacaaa 12119572  T
Q  111 ccctaatttctac-ccttttcccaatctcacc 141  Q
    || |||||||||| | |||| |||||||||||    
T  12119571 ccataatttctactcttttttccaatctcacc 12119540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 143
Target Start/End: Complemental strand, 40632577 - 40632445
Alignment:
Q  10 gaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaaca 108  Q
    ||||||||||||  ||||||||||||||||| ||||||||||||| |||| ||||||||  |||||||||||||||||||  ||||| |||| | ||||     
T  40632577 gaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaac- 40632481  T
Q  109 aaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||| ||||||||||||| ||||||||||||||||||    
T  40632480 aactctaatttctacccattttcccaatctcaccaa 40632445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 37229759 - 37229890
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagcttga-caagttcaccatgaacaa 109  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||| | |||| |||| ||||||||| ||||| |||| | |||| |||| | |||||     
T  37229759 ggagagattgatctctccaatccactat-aaatgagttcttacaaa-gagatataaaaagggttacaacaaatttgctttaacaagctcacaaagaacac 37229856  T
Q  110 accctaatttctacccttttcccaatctcaccaa 143  Q
    ||||||||||||||| ||||||||||||||||||    
T  37229857 accctaatttctaccattttcccaatctcaccaa 37229890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 45687216 - 45687351
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaa 106  Q
    |||||||||||| |  ||||||||||||||||| ||||||||||||| |||  |||||||| | |||| ||||||||||| |||||||| |||| | |||    
T  45687216 tggaggagagatagatctctccaatccactatc-aatgagttcttac-aaatagatacaaatgagttataagaaattagctttgacaagctcacaaagaa 45687313  T
Q  107 caaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    |||| |||||||||| ||| ||||||||||||||||||    
T  45687314 caaaacctaatttcttcccattttcccaatctcaccaa 45687351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 5429820 - 5429679
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| |||  |||||||| ||||||||||||||||||||  ||||| |||    
T  5429820 cctaatctgggggagagattgatctctccaatccactatc-aatgagttcttac-aaatagatacaaatgggttacaagaaattagcttcaacaagctca 5429723  T
Q  100 ccatgaacaaaccctaatttctac-ccttttcccaatctcaccaa 143  Q
    | | |||  ||||||||||||||| | ||||||||||||||||||    
T  5429722 cgaagaa-taaccctaatttctactcattttcccaatctcaccaa 5429679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 8648280 - 8648139
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  |||||||||||| |||| ||||||||||||| |||| |||||||| |||||| |||||||||||||  ||||  |||    
T  8648280 cctactctggaggagagattgatctctccaatccaatatc-aatgagttcttac-aaagagatacaaatgggttataagaaattagcttcaacaaactca 8648183  T
Q  100 ccatgaacaaaccctaatttcta-cccttttcccaatctcaccaa 143  Q
    | |||||| |||||||||||||| || |||||||| |||||||||    
T  8648182 caatgaac-aaccctaatttctatccattttcccattctcaccaa 8648139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 27416992 - 27417133
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| |||||||| |||| |||| |||||||| ||||||||||||||||||||  ||||| |||    
T  27416992 cctaatctgggggagagattgatctctccaatccactatc-aatgagtttttac-aaagagatacaaatgggttacaagaaattagcttcaacaagctca 27417089  T
Q  100 ccatgaacaaaccctaatttctac-ccttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||| | |||| |||||||||||||    
T  27417090 caaagaac-aaccctaatttctacacattttaccaatctcaccaa 27417133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 46147429 - 46147557
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||   ||||||||||||||||||| ||||||||||||| | |||||||| | ||||||||||||||||||  ||||| |||| |||||| ||    
T  46147429 ggagagattgatgtctccaatccactatcaaa-gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaac-aa 46147525  T
Q  111 ccctaatttctaccc-ttttcccaatctcacc 141  Q
    ||||||||||||||| |||| |||||||||||    
T  46147526 ccctaatttctacccatttttccaatctcacc 46147557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 6656097 - 6655975
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||| |||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| | ||||||||||||||||||  |||||||||    
T  6656097 cctactctggatgagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgagttacaagaaattagcttcaacaagttca 6656000  T
Q  100 ccatgaacaaaccctaatttctaccc 125  Q
    | | |||| |||| ||||||||||||    
T  6655999 caaagaac-aaccttaatttctaccc 6655975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 136
Target Start/End: Original strand, 5207881 - 5208003
Alignment:
Q  13 gagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttga-caagttcaccatgaacaaac 111  Q
    |||||||||  || |||||||||||||||| ||||||||||||||  | ||| | ||||||| ||| |||||||||| | ||||||||| | ||||||||    
T  5207881 gagagattgatctttccaatccactatcaa-tgagttcttacaaatag-atatacaagggttgcaataaattagcttcaacaagttcacaaagaacaaac 5207978  T
Q  112 cctaatttctacccttttcccaatc 136  Q
    |||||||||||||||||| ||||||    
T  5207979 cctaatttctaccctttttccaatc 5208003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 50673874 - 50673960
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| | ||||||||||||||||||    
T  50673874 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgagttacaagaaattagctt 50673960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 48893665 - 48893810
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttc- 98  Q
    |||| ||||| ||||||||||  |||||||||||||||||||| |||||||||| |||| |||||||| | ||||||||||||||||||  ||||| ||     
T  48893665 cctaatctgggggagagattgatctctccaatccactatcaaa-gagttcttac-aaagagatacaaatgagttacaagaaattagcttcaacaagctca 48893762  T
Q  99 ---accatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
       || |||||| ||||||||||||||||| ||||| ||||||||||||    
T  48893763 caaacaatgaac-aaccctaatttctacccattttctcaatctcaccaa 48893810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 52082715 - 52082825
Alignment:
Q  32 tccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattag-cttgacaagttcaccatgaacaaaccctaatttctaccc-tttt 129  Q
    |||||||||||| || |||||||||| | |||||||| |||||||||||||||||  ||||||||||||| | |||| ||||||| ||||||||| ||||    
T  52082715 tccactatcaaa-gatttcttacaaa-gagatacaaatgggttacaagaaattagttttgacaagttcacaaagaac-aaccctagtttctacccatttt 52082811  T
Q  130 cccaatctcaccaa 143  Q
    ||||||||||||||    
T  52082812 cccaatctcaccaa 52082825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 5871961 - 5871820
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||| |||||||||||||| |||||||| | |||| |||| ||| ||||||||||||||| ||||  ||||| |||    
T  5871961 cctaatctgggggagagattgatctctctaatccactatcaaa-gagttcttgc-aaagtgataaaaatgggttacaagaaatttgcttaaacaagctca 5871864  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | ||||||| |||||||||||||| |||| |||||||||||||    
T  5871863 caaagaacaaa-cctaatttctacccatttttccaatctcaccaa 5871820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 6542212 - 6542349
Alignment:
Q  7 ctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatga 105  Q
    |||| ||||||||||  ||||||||||||||||| || |||||||||| |||| ||||||||||| | |||||||||||| ||  ||||| |||| | ||    
T  6542212 ctgggggagagattgatctctccaatccactatc-aacgagttcttac-aaagagatacaaaaggctaacaagaaattagtttcaacaagctcacaaaga 6542309  T
Q  106 acaaaccctaatttctacc--cttttcccaatctcaccaa 143  Q
    ||||| |||||||||||||   ||||||||||||| ||||    
T  6542310 acaaatcctaatttctaccattttttcccaatctccccaa 6542349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 26699482 - 26699596
Alignment:
Q  14 agagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaacc 112  Q
    ||||||||  |||||||||||| ||| ||||||||||||   |||| |||||||||| ||||||||||||||||||  ||||| |||| | |||||||||    
T  26699482 agagattgatctctccaatccattat-aaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaacc 26699580  T
Q  113 ctaatttctacccttt 128  Q
    ||||| | ||||||||    
T  26699581 ctaatctatacccttt 26699596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 143
Target Start/End: Original strand, 47038443 - 47038577
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttga-caagttcaccatg 104  Q
    ||||| ||||||||||  ||||||||||||||||||| ||||| ||||||||  | ||||||| |  ||||||||||||||||| | |||| |||| | |    
T  47038443 tctgggggagagattgatctctccaatccactatcaa-tgagtccttacaaacag-atacaaatga-ttacaagaaattagcttcaacaagctcacaaag 47038539  T
Q  105 aacaaaccctaatttctacccttttcccaatctcaccaa 143  Q
    ||||| ||||||||||||||| ||| |||||||||||||    
T  47038540 aacaa-ccctaatttctacccattttccaatctcaccaa 47038577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 52467392 - 52467519
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||||  |||| |||| |||| |||||||| ||||||||||| ||||||||  ||||| |||| | |||||||    
T  52467392 ggagagattgatctctccaatccactatcaaa-aagttattac-aaagtgatacaaatgggttacaagatattagcttcaacaagctcacaaagaacaaa 52467489  T
Q  111 ccctaatttctaccc-ttttcccaatctcac 140  Q
     |||||||||||||| ||||||||| |||||    
T  52467490 -cctaatttctacccattttcccaacctcac 52467519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 24969230 - 24969112
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    ||||||||||||||||||| | |||||||||||| | |||||||| | ||||||||||||||||||  ||||| |||| | |||||||  ||||||||||    
T  24969230 ctctccaatccactatcaatt-agttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaa-tctaatttcta 24969134  T
Q  123 ccc-ttttcccaatctcaccaa 143  Q
    ||| |||| |||||||||||||    
T  24969133 cccatttttccaatctcaccaa 24969112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 35662582 - 35662496
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    |||| ||| ||||||| ||||  ||||||||||||||||||| |||||||||||||| | |||||||| | ||||||||||||||||||    
T  35662582 cctactcttgaggagatattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagctt 35662496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 50262728 - 50262814
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    |||| ||||||||| ||||||   ||||||||| |||||||| |||||||||||||| | |||||||| ||||||||||||||||||||    
T  50262728 cctactctggaggaaagattgatatctccaatcaactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctt 50262814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 143
Target Start/End: Complemental strand, 31474287 - 31474150
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatg 104  Q
    ||||| |||||||||   |||||||||| |||||||| |||||||||||||| | |||||||| | ||||||||||||||||||  ||||  |||  | |    
T  31474287 tctggtggagagatttatctctccaatcaactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaaactcaaaaag 31474190  T
Q  105 aacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    |||||  |||||||||||||| ||||| ||||||||||||    
T  31474189 aacaagacctaatttctacccattttctcaatctcaccaa 31474150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 3913578 - 3913503
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    ||||||||||  ||||||||||||||||| ||||||||||||| ||||  ||||||| |||||| |||||||||||||    
T  3913578 ggagagattgatctctccaatccactatc-aatgagttcttac-aaagatatacaaatgggttaaaagaaattagctt 3913503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 51337194 - 51337064
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcaccatgaacaaa- 110  Q
    ||||||||||  ||||| ||| ||||||||| |||||||||| ||||| ||||||||||||||| || |||||| ||| | ||| |||| | |||||||     
T  51337194 ggagagattgatctctctaatacactatcaa-tgagttctta-aaaagagatacaaaagggttataataaattatctt-aaaagctcacaaagaacaaat 51337098  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    || |||||||||||| ||||| ||||||||||||    
T  51337097 ccgtaatttctaccctttttctcaatctcaccaa 51337064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 41639353 - 41639263
Alignment:
Q  54 caaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    |||||| |||||||| ||||||||||||||||||||  | ||||| || | |||| ||||||||||||||||| |||||||||||| |||||    
T  41639353 caaaagagatacaaatgggttacaagaaattagcttcaaaaagtttacaaagaac-aaccctaatttctacccattttcccaatcttaccaa 41639263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 13009478 - 13009550
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaa 82  Q
    |||||||||||| |  ||||||||||||||||| ||||||||||||| ||||||||||||| |  ||||||||||    
T  13009478 tggaggagagatcgatctctccaatccactatc-aatgagttcttac-aaagggatacaaatgttttacaagaaa 13009550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 48142444 - 48142542
Alignment:
Q  42 aatgagttcttacaaaagggatacaaaagggttacaagaaattagcttga-caagttcaccatgaacaaaccctaatttctacccttttcccaatctca 139  Q
    |||||||||||   |||| |||| | ||||||||||||||| |||||| | |||| |||| | ||||||||||||||||||| | | ||||||||||||    
T  48142444 aatgagttctttacaaagagatatacaagggttacaagaaactagcttcaacaagctcacaaagaacaaaccctaatttctatcatgttcccaatctca 48142542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 1983324 - 1983252
Alignment:
Q  56 aaagggatacaaaagggttacaagaaattagcttgacaagttcaccatgaacaaaccctaatttctaccctttt 129  Q
    |||| |||||||| ||||||||||||||||||||| |||| |||| | ||||||| | ||||||||| ||||||    
T  1983324 aaagtgatacaaaggggttacaagaaattagcttg-caagctcacaaagaacaaaacataatttctatcctttt 1983252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 89
Target Start/End: Original strand, 22882836 - 22882864
Alignment:
Q  61 gatacaaaagggttacaagaaattagctt 89  Q
    |||||||||||||||||||||||||||||    
T  22882836 gatacaaaagggttacaagaaattagctt 22882864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 89
Target Start/End: Original strand, 22934500 - 22934528
Alignment:
Q  61 gatacaaaagggttacaagaaattagctt 89  Q
    |||||||||||||||||||||||||||||    
T  22934500 gatacaaaagggttacaagaaattagctt 22934528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 29254623 - 29254553
Alignment:
Q  13 gagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaatta 85  Q
    |||||||||  ||||||||||||||||| || |||||||||| |||| || ||||| ||||| ||||||||||    
T  29254623 gagagattgatctctccaatccactatc-aacgagttcttac-aaagagacacaaatgggttgcaagaaatta 29254553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 33090020 - 33089933
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    |||| ||| ||||||||||||  ||||| ||||||||||| |||||||||||   | || ||||||||| ||||| || ||||||||||    
T  33090020 cctactctagaggagagattgatctctctaatccactatc-aatgagttctttacagagagatacaaaatggttataataaattagctt 33089933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 44967924 - 44967992
Alignment:
Q  71 ggttacaagaaattagcttga-caagttcaccatgaacaaaccctaatttctacccttttcccaatctc 138  Q
    |||||||||||||| |||| | |||| || ||| || |||| ||||||||||||| |||||||||||||    
T  44967924 ggttacaagaaattggcttcagcaagctctccaagagcaaaacctaatttctaccattttcccaatctc 44967992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 55085445 - 55085532
Alignment:
Q  56 aaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctacccttttcccaatctcaccaa 143  Q
    |||| |||||||| || |||||||||||||||||  ||||| |||| | |||| |||| |||||||||||  ||| |||||||||||||    
T  55085445 aaagagatacaaatggtttacaagaaattagcttcaacaagctcacaaagaac-aaccttaatttctacctattttccaatctcaccaa 55085532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 3617591 - 3617352
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  3617591 cctactctggaggagagattgtactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttacaagaaattagcttgacaagttca 3617493  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3617492 ctatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 3617393  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3617392 actctaatcaaagaaccctaaaccctagagcttcccctttg 3617352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 6716640 - 6716414
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcac 100  Q
    |||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6716640 cctactctggaggagagtttgtactctccaatccactatcaaa-gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacaagttcac 6716543  T
Q  101 catgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6716542 aatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 6716443  T
Q  201 ctctaatcaaagaaccctaaaccctagag 229  Q
    |||||||||||||||||||||||||||||    
T  6716442 ctctaatcaaagaaccctaaaccctagag 6716414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 54635265 - 54635039
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcac 100  Q
    |||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  54635265 cctactctggaggagagtttgtactctccaatccactatcaaa-gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacaagttcac 54635168  T
Q  101 catgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54635167 aatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 54635068  T
Q  201 ctctaatcaaagaaccctaaaccctagag 229  Q
    |||||||||||||||||||||||||||||    
T  54635067 ctctaatcaaagaaccctaaaccctagag 54635039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 45283127 - 45282897
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaa---gggatacaaaagggttacaagaaattagcttgacaagtt 97  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||||||||||||||||    
T  45283127 cctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaaaaagggatacaaaagg-ttacaagaaattagcttgacaagtt 45283029  T
Q  98 caccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagag 197  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45283028 cactatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttgcaaggtgtttcccatgttttcaacccaagag 45282929  T
Q  198 atactctaatcaaagaaccctaaaccctagag 229  Q
    ||||||||||||||||||||||||||||||||    
T  45282928 atactctaatcaaagaaccctaaaccctagag 45282897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 25637568 - 25637331
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  25637568 cctactctggaggagagattgtactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttacaagaaattagcttgacaagttca 25637470  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  25637469 ctatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagat 25637372  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||| | ||||||||    
T  25637371 actctaatcaaagaaccctaaaccctagagatacccctttg 25637331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 4600771 - 4601009
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| ||| |||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||| ||||    
T  4600771 cctactctagaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggaatacaaaagg-ttacaagaaattagcttgacaatgttc 4600869  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  4600870 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaga 4600967  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  4600968 tactctaatcaaagaaccctaaaccctagagctttccctttg 4601009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 4598550 - 4598788
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  4598550 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacaatgttc 4598648  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||    
T  4598649 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acagggtgtttcccatgttttcaacccaagaga 4598746  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  4598747 tactctaatcaaagaaccctaaaccctagagctttccctttg 4598788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 10056360 - 10056122
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  10056360 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacaatgttc 10056262  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||     
T  10056261 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagg 10056164  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  10056163 tactctaatcaaagaaccctaaactctagagcttcccctttg 10056122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 10058582 - 10058344
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  10058582 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacaatgttc 10058484  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||     
T  10058483 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagg 10058386  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  10058385 tactctaatcaaagaaccctaaactctagagcttcccctttg 10058344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 10060804 - 10060566
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  10060804 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacaatgttc 10060706  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||     
T  10060705 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagg 10060608  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  10060607 tactctaatcaaagaaccctaaactctagagcttcccctttg 10060566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 10063026 - 10062788
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  10063026 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacaatgttc 10062928  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||     
T  10062927 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagg 10062830  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  10062829 tactctaatcaaagaaccctaaactctagagcttcccctttg 10062788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 10065248 - 10065010
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  10065248 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacaatgttc 10065150  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||     
T  10065149 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagg 10065052  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  10065051 tactctaatcaaagaaccctaaactctagagcttcccctttg 10065010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 10211536 - 10211298
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  10211536 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacaatgttc 10211438  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||     
T  10211437 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagg 10211340  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  10211339 tactctaatcaaagaaccctaaaccctagagctttccctttg 10211298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 10209316 - 10209078
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||  ||||| ||| |||||||||||||||||||||| ||||    
T  10209316 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggactacaagagg-ttacaagaaattagcttgacaatgttc 10209218  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||     
T  10209217 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagg 10209120  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  10209119 tactctaatcaaagaaccctaaaccctagagctttccctttg 10209078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 40 - 240
Target Start/End: Complemental strand, 10067431 - 10067232
Alignment:
Q  40 caaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttcaccatgaacaaaccctaatttctacccttttcccaatct 137  Q
    ||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||    
T  10067431 caaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatct 10067333  T
Q  138 caccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccct 237  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  10067332 caccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttcccct 10067235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 801233 - 801005
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagg-gttacaagaaattagctt-gacaagttc 98  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | ||||||||||||||| || |||||||||    
T  801233 cctactctggaggagagattgtactctccaatccactatcaa-tgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttc 801135  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagag 197  Q
    || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||  |||||||||||    
T  801134 acaatgaacaa-ccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagag 801036  T
Q  198 atactctaatcaaagaaccctaaaccctagag 229  Q
    |  |||||||||||| || |||||||||||||    
T  801035 aagctctaatcaaag-actctaaaccctagag 801005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 6718718 - 6718598
Alignment:
Q  109 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatc 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6718718 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatc 6718619  T
Q  209 aaagaaccctaaaccctagag 229  Q
    |||||||||||||||||||||    
T  6718618 aaagaaccctaaaccctagag 6718598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 7780031 - 7780208
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||| || ||||||||||    
T  7780031 cctactctggaggagagattgaactctccaatccactatcaa-tgagttcttacaaaagagatacaaaagg-ttacaagaaattagatttgacaagttca 7780128  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttccca 180  Q
    | |||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||| | ||||||||||||||    
T  7780129 caatgaacaa-ccctaatttctacccttttcccaatctcacgaagacactcaatgattttctctcttcaaggtgtttccca 7780208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 23200165 - 23200398
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||    
T  23200165 cctactctggaggagagattgaactctccaattcactatc-aatgagttcttacaaaa-agatacaaaagggttacaagaaattagctttgacaagttca 23200262  T
Q  100 ccatgaacaaaccctaatttctacc-cttttcccaatctcac------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacc 191  Q
    | | |||| ||| ||||||||||||  |||||||||||||||      ||||||||||||||||| || ||   |||||||||| | ||||||  |||||    
T  23200263 caaagaac-aactctaatttctaccatttttcccaatctcaccaagaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacc 23200361  T
Q  192 caagagatactctaatcaaagaaccctaaaccctagag 229  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  23200362 caagagaaactctaatcaaag-accctaaaccctagag 23200398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 45095304 - 45095075
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||| ||||||||||||  ||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  45095304 cctactctagaggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttca 45095207  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacc 191  Q
    | | |||||| |||||||||||||| |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  |||||    
T  45095206 caaagaacaa-ccctaatttctaccattttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacc 45095108  T
Q  192 caagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||| ||||||||||||| |||||||||||||    
T  45095107 caagaga-actctaatcaaag-accctaaacccta 45095075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 23197966 - 23198199
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||    
T  23197966 cctactctggaggagagattgaactctccaattcactatc-aatgagttcttacaaaa-agatacaaaagggttacaagaaattagctttgacaagttca 23198063  T
Q  100 ccatgaacaaaccctaatttctacc-cttttcccaatctcac------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacc 191  Q
    | |  ||| ||| ||||||||||||  |||||||||||||||      ||||||||||||||||| || ||   |||||||||| | ||||||  |||||    
T  23198064 caaaaaac-aactctaatttctaccatttttcccaatctcaccaagaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacc 23198162  T
Q  192 caagagatactctaatcaaagaaccctaaaccctagag 229  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  23198163 caagagaaactctaatcaaag-accctaaaccctagag 23198199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 226
Target Start/End: Original strand, 9636160 - 9636385
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattag-cttgacaagttcaccatgaa 106  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||  ||||||||||||| | |||    
T  9636160 tggaggagagattgaactctccaatccactatc-aatgagttcttacaaaa-agatacaaaagggttacaagaaattagttttgacaagttcacaaagaa 9636257  T
Q  107 caaaccctaatttctacccttt--tcccaatctc-------accaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaaga 196  Q
    | ||||||||||||||||||||  ||||||||||       ||||||||||||||||||| || ||   |||||||||| | || |||  ||||||||||    
T  9636258 c-aaccctaatttctacccttttctcccaatctcaccaatgaccaagacactcaatgattttcactcaccaaggtgtttacaatatttcccaacccaaga 9636356  T
Q  197 gatactctaatcaaagaaccctaaacccta 226  Q
    || ||||||||||||| |||||||||||||    
T  9636357 gagactctaatcaaag-accctaaacccta 9636385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 5258171 - 5258402
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| ||||||| |||||||| |||||||||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||||| ||||||||||||    
T  5258171 cctactctggagaagagattgaactctccaatccactatc-aatgagttctt-ccaaagagatacaaaagggttacaagaaattagctttgacaagttca 5258268  T
Q  100 ccatgaacaaaccctaatttctaccc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaa 189  Q
    | | |||| |||||||||||||||||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  |||    
T  5258269 caaagaac-aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaa 5258367  T
Q  190 cccaagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  5258368 cccaagaga-actctaatcaaag-accctaaacccta 5258402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 226
Target Start/End: Original strand, 5260357 - 5260581
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaa 106  Q
    ||||| |||||||| |||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||||||||| ||||||||||||| | |||    
T  5260357 tggagaagagattgaactctccaatccactatcaa-tgagttcttccaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaa 5260454  T
Q  107 caaaccctaatttctaccc--ttttcccaatctc-------accaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaaga 196  Q
    | |||||||||||||||||  |||||||||||||       ||||||||||||||||||| || ||   |||||||||| | ||||||  ||||||||||    
T  5260455 c-aaccctaatttctacccttttttcccaatctcaccaatgaccaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaaga 5260553  T
Q  197 gatactctaatcaaagaaccctaaacccta 226  Q
    || ||||||||||||| |||||||||||||    
T  5260554 ga-actctaatcaaag-accctaaacccta 5260581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 37408599 - 37408458
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| ||||||||||||||||  |||| |||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||    
T  37408599 cctactctggaggagagattgatctcttcaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttca 37408502  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  37408501 caaagaac-aaccctaatttctaccctttttcccaatctcaccaa 37408458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 19683923 - 19684054
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaa 106  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||| | |||    
T  19683923 tggaggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaa 19684020  T
Q  107 caaaccctaatttctaccc-ttttcccaatctcac 140  Q
    | ||||||||||||||||| |||||||||||||||    
T  19684021 c-aaccctaatttctacccattttcccaatctcac 19684054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 29196424 - 29196555
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| ||||| |||||||||||||| |||||| |||| | |||||||    
T  29196424 ggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttccaagaaattagctttgacaagctcacaaagaacaaa 29196521  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| ||||||||||||||||||    
T  29196522 ccctaatttctacccattttcccaatctcaccaa 29196555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 7762406 - 7762265
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||  |||||||||    
T  7762406 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaaagagttacaagaaattagcttcaacaagttca 7762309  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||| ||||||||||||    
T  7762308 caaagaac-aaccctaatttctaccctttttctcaatctcaccaa 7762265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 39153388 - 39153526
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||  ||||||||||||| | ||||||||||||||||||  ||||| |||    
T  39153388 cctaatctgggggagagattgttctctccaatccactatc-aatgagttctta-taaagggatacaaatgagttacaagaaattagcttaaacaagctca 39153485  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcac 140  Q
    | ||||||||| |||||||||||||| |||||||||||||||    
T  39153486 caatgaacaaa-cctaatttctacccattttcccaatctcac 39153526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 7764605 - 7764476
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||   ||||||||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||| || |||||||||    
T  7764605 cctactctggaggagagattcatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagagttacaagaaattagctttaacaagttca 7764508  T
Q  100 ccatgaacaaaccctaatttctacccttttccc 132  Q
    | | |||| ||||||||||||||||||||||||    
T  7764507 caaagaac-aaccctaatttctacccttttccc 7764476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 34491353 - 34491212
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| | ||||||||||||||||||  ||||| |||    
T  34491353 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgagttacaagaaattagcttcaacaagctca 34491256  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  34491255 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 34491212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 760988 - 760757
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||  ||||| |||    
T  760988 cctaatctgggggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctca 760891  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaa 189  Q
    | | ||||| | |||||||||||||| |||||||||||||||       ||||||||||||||||| || ||  | ||||||||||   ||||||  |||    
T  760890 caaagaacaga-cctaatttctacccattttcccaatctcacaaatgaacaagacactcaatgattttcactcatccaaggtgtttataatgtttcccaa 760792  T
Q  190 cccaagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||||| ||||||||||||| ||||| |||||||    
T  760791 cccaagaga-actctaatcaaag-acccttaacccta 760757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 22835040 - 22835167
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||  ||||| |||| | |||||||    
T  22835040 ggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa 22835137  T
Q  111 ccctaatttctaccc-ttttcccaatctcac 140  Q
     |||||||||||||| |||||||||||||||    
T  22835138 -cctaatttctacccattttcccaatctcac 22835167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 9581423 - 9581193
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||||  ||||| |||    
T  9581423 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagggatacaaatgggttaaaagaaattagcttaaacaagctca 9581326  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaac 190  Q
    | | ||||||| |||||||||||||| ||||| |||| |||       ||||||||||||||||| || ||    |||||||||| | ||||||  ||||    
T  9581325 caaagaacaaa-cctaatttctacccatttccgaatcccacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaac 9581227  T
Q  191 ccaagagatactctaatcaaagaaccctaaacccta 226  Q
    |||||||| ||||||||||||| ||||| |||||||    
T  9581226 ccaagaga-actctaatcaaag-acccttaacccta 9581193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 4570093 - 4569952
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||| ||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| | ||||||||||||||||||  | ||| |||    
T  4570093 cctactctggagtagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgagttacaagaaattagcttcaataagctca 4569996  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | |||||| ||||||||||||||||| ||||||||||||||||||    
T  4569995 caatgaac-aaccctaatttctacccattttcccaatctcaccaa 4569952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 41819550 - 41819691
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt-gacaagttc 98  Q
    |||| ||||||||||||||||   |||||||||||||||  ||||||||||||| |||| ||||||||| |||||||||||||||||||| |||||| ||    
T  41819550 cctactctggaggagagattgatgtctccaatccactat--aatgagttcttac-aaagagatacaaaatgggttacaagaaattagcttagacaagctc 41819646  T
Q  99 accatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    || |  ||| ||||||||||||||||| ||||||||||||||||||    
T  41819647 acaaaaaac-aaccctaatttctacccattttcccaatctcaccaa 41819691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 40734628 - 40734498
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| | ||||||||||||||| ||  ||||| |||| | |||| ||    
T  40734628 ggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgtgttacaagaaattaggttcaacaagctcacaaagaac-aa 40734532  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| ||||||||||||||||||    
T  40734531 ccctaatttctacccattttcccaatctcaccaa 40734498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 49199496 - 49199638
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt-gacaagttc 98  Q
    |||| |||||||||||||||   ||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||||  ||||| ||    
T  49199496 cctagtctggaggagagattaatctctccaatccactatc-aatgagttcttac-aaagagatacaaaatgggttacaagaaattagcttcaacaagctc 49199593  T
Q  99 accatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    || | |||| |||| |||||||||||| ||||||||||||||||||    
T  49199594 acaaagaac-aaccttaatttctacccattttcccaatctcaccaa 49199638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 6095626 - 6095767
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| |||||||||||||||| |||  | ||||| |    
T  6095626 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaattaacttcaagaagttta 6095723  T
Q  100 ccatgaacaaaccctaatttctac-ccttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||| | ||||||||||||||||||    
T  6095724 caaagaac-aaccctaatttctactcattttcccaatctcaccaa 6095767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 30236266 - 30236129
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| |||| ||||||||  |||||||||||||||||||  ||||| |||    
T  30236266 cctaatctgggggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaataggttacaagaaattagcttcaacaagctca 30236169  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctca 139  Q
    | | |||| ||||||||||||||||| ||||||||||||||    
T  30236168 caaagaac-aaccctaatttctacccattttcccaatctca 30236129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 44331686 - 44331545
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||| ||||||||| |||| |||||||| || |||||||||||||||||  ||||| |||    
T  44331686 cctaatctgggggagagattgatctctccaatccactatc-aataagttcttac-aaagagatacaaatggcttacaagaaattagcttcaacaagctca 44331589  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | |||||| ||||||||||||||||| |||||| |||||||||||    
T  44331588 caatgaac-aaccctaatttctacccattttcctaatctcaccaa 44331545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 46860615 - 46860474
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||| ||||||  ||||||||||||||||||| |||||| ||||||| | |||||||| ||||||||||||||||||||  ||||| |||    
T  46860615 cctactctggaggaaagattgatctctccaatccactatcaa-tgagttattacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctca 46860518  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | ||||||| |||||||||||||| ||||| ||||||||||||    
T  46860517 caaagaacaaa-cctaatttctacccattttctcaatctcaccaa 46860474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 29682489 - 29682269
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||| |||||||||||||||  ||||| |||| | |||||||    
T  29682489 ggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggtgacaagaaattagcttaaacaagctcacaaagaacaaa 29682392  T
Q  111 ccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagata 200  Q
     | |||||||||||| |||||||||||||||       ||||||||||||||||| || ||    |||||||||| | ||||||  |||||||||||| |    
T  29682391 -cataatttctacccattttcccaatctcacaaataaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-a 29682294  T
Q  201 ctctaatcaaagaaccctaaacccta 226  Q
    |||||||||||| ||||| |||||||    
T  29682293 ctctaatcaaag-acccttaacccta 29682269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 143
Target Start/End: Complemental strand, 29813199 - 29813063
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatg 104  Q
    ||||| ||||||||||  |||||||||||||||| ||||||||||||||||| | ||| |||| ||||||||||||||||||||  |||||||||| | |    
T  29813199 tctgggggagagattgatctctccaatccactat-aaatgagttcttacaaa-gagatgcaaatgggttacaagaaattagcttcaacaagttcacaaag 29813102  T
Q  105 aacaaaccctaatttctacc-cttttcccaatctcaccaa 143  Q
    ||| ||||||||||||||||  |||| |||||||||||||    
T  29813101 aac-aaccctaatttctacctatttttccaatctcaccaa 29813063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 31314563 - 31314447
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    |||||||||||||||||||| |||||||||||||| | ||||||| ||||||||||||||||||||  ||||| |||| |||||| ||||||||||||||    
T  31314563 ctctccaatccactatcaaa-gagttcttacaaaaag-atacaaatgggttacaagaaattagcttcaacaagatcacaatgaac-aaccctaatttcta 31314467  T
Q  123 ccc-ttttcccaatctcacc 141  Q
    ||| ||||| ||||||||||    
T  31314466 cccattttctcaatctcacc 31314447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 143
Target Start/End: Complemental strand, 54593840 - 54593704
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatg 104  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||| ||||||||||  ||||| |||| | |    
T  54593840 tctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaataaattagcttcaacaagctcacaaag 54593743  T
Q  105 aacaaaccctaatttctac-ccttttcccaatctcaccaa 143  Q
    ||| ||||||||||||| | | ||||||||||||||||||    
T  54593742 aac-aaccctaatttctgcacattttcccaatctcaccaa 54593704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 40735524 - 40735293
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| |||| ||||||||  |||||||| ||||||||||  ||||| |||    
T  40735524 cctaatctgggggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaactggttacaataaattagcttcaacaagctca 40735427  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctctc-tttacaaggtgtttcccatgttttc-aa 189  Q
    | | |||| ||||||||||||||||| ||||| |||||||||       ||||||||||||||||| || | ||| |||||||||| | |||||| | ||    
T  40735426 caaagaac-aaccctaatttctacccattttctcaatctcaccaatgaacaagacactcaatgattttcacttttccaaggtgtttacaatgtttcctaa 40735328  T
Q  190 cccaagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||||| ||| ||||||||| ||||| |||||||    
T  40735327 cccaagaga-actttaatcaaag-accctcaacccta 40735293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 5236506 - 5236624
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    ||||| |||||| |||||| |||||||||||||| | |||||||| ||||||||||||||||||||  |||||||||| | |||| ||||||||||||||    
T  5236506 ctctcgaatccattatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 5236602  T
Q  123 ccc-ttttcccaatctcaccaa 143  Q
    ||| ||||||||||||||||||    
T  5236603 cccattttcccaatctcaccaa 5236624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 44700516 - 44700646
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  |||||||||||||||||||| |||||||||| |||| ||||||||  |||||||||||||||||||  ||||  |||| | |||| ||    
T  44700516 ggagagattgatctctccaatccactatcaaa-gagttcttac-aaagagatacaaataggttacaagaaattagcttcaacaaactcacaaagaac-aa 44700612  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| ||||||||||||||||||    
T  44700613 ccctaatttctacccattttcccaatctcaccaa 44700646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 29811009 - 29810868
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  |||||||||    
T  29811009 cctaatctgggggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttca 29810912  T
Q  100 ccatgaacaaaccctaatttctac-ccttttcccaatctcaccaa 143  Q
    | | |||| ||| |||||||||||   |||||| |||||||||||    
T  29810911 caaagaac-aactctaatttctacatattttcctaatctcaccaa 29810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 43401828 - 43401970
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt-gacaagttc 98  Q
    |||| |||||||||||||||    |||||||||||||||| ||||||||||||| |||| |||| |||| | ||||||||||||||||||  ||||| ||    
T  43401828 cctactctggaggagagattaatttctccaatccactatc-aatgagttcttac-aaagagataaaaaatgcgttacaagaaattagcttcaacaagctc 43401925  T
Q  99 accatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    || | |||| ||||||||||||||||| ||||||||||||||||||    
T  43401926 acaaagaac-aaccctaatttctacccattttcccaatctcaccaa 43401970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 51398932 - 51398818
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    ||||||||||||||||||| |||||||||||||| | |||||||| | ||||||||||||||||||  |||||||||| | |||| ||||||||||||||    
T  51398932 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagttcactaagaac-aaccctaatttcta 51398836  T
Q  123 ccc-ttttcccaatctca 139  Q
    ||| |||| |||||||||    
T  51398835 cccatttttccaatctca 51398818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 53921541 - 53921671
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||||  |||||||| | |||||||||||||||| || ||||| |||| |  ||||||    
T  53921541 ggagagattgatctctccaatccactatc-aatgagttcttacaaaa-tgatacaaatgagttacaagaaattagctttaacaagctcacaaacaacaaa 53921638  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
     |||||||||||||| |||| |||||||||||||    
T  53921639 -cctaatttctacccatttttccaatctcaccaa 53921671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 46173498 - 46173377
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||||| ||| |||||||||| | |||||||| ||||||||||||||||||||  ||||| |||    
T  46173498 cctaatctgggggagagattgatctctccaatccactatcaa-tgaattcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctca 46173401  T
Q  100 ccatgaacaaaccctaatttctacc 124  Q
    | | |||| ||||||||||||||||    
T  46173400 caaagaac-aaccctaatttctacc 46173377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 5433956 - 5434046
Alignment:
Q  56 aaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaacaaaccctaatttctacccttt--tcccaatctcaccaa 143  Q
    |||| |||| |||||||||||||||||||||| || ||||| |||| | ||||||||||||||||||||| |||  |||||||||||||||    
T  5433956 aaagagatataaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttctaccattttctcccaatctcaccaa 5434046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 32891222 - 32891105
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    |||||||||||||||||||  ||||||||||||| | |||||||| | ||||||||||||||||||  ||||| |||| | ||||||| | |||||||||    
T  32891222 ctctccaatccactatcaac-gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacttaatttcta 32891125  T
Q  123 ccc-ttttcccaatctcacc 141  Q
    ||| ||||| ||||||||||    
T  32891124 cccattttctcaatctcacc 32891105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 226
Target Start/End: Original strand, 32744486 - 32744684
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    |||| ||||||||||||||| ||||||||||||| | |||||||| | ||||||||||||||||||  ||||| |||| | |||||||  ||||||||||    
T  32744486 ctcttcaatccactatcaaa-gagttcttacaaa-gtgatacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaa--ctaatttcta 32744581  T
Q  123 ccc-ttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaa 220  Q
    ||| ||||  |||||||| ||| | ||||||||||| || ||   ||| |||||| | ||||||  |||||||||||| ||||||||||||| ||||| |    
T  32744582 cccattttttcaatctca-caaaatactcaatgattttcactcaccaatgtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctca 32744678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 43403771 - 43403913
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagg-gttacaagaaattagcttga-caagttc 98  Q
    |||| |||||||||||||||   ||||||||||||||||||| |||||||||||||| | |||| || | | |||||||||||| ||||| | |||| ||    
T  43403771 cctactctggaggagagattaatctctccaatccactatcaa-tgagttcttacaaa-gagataaaacatgagttacaagaaatgagcttcaacaagctc 43403868  T
Q  99 accatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    || | |||||| || |||||||||||| ||||||||||||||||||    
T  43403869 acaaagaacaagcc-taatttctacccattttcccaatctcaccaa 43403913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16499170 - 16499084
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| |||| |||| ||| |||| |||||||||||||||    
T  16499170 cctactctgggggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatataaatgggtaacaagaaattagctt 16499084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 36018987 - 36018852
Alignment:
Q  7 ctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt-gacaagttcaccatg 104  Q
    |||| ||||||||||  ||||||||||||||||  ||||||||||||| |||| ||||||||| | |||||||||||||| |||  ||||| |||| | |    
T  36018987 ctgggggagagattgacctctccaatccactat--aatgagttcttac-aaagagatacaaaatgagttacaagaaattaacttcaacaagctcacaaag 36018891  T
Q  105 aacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||| |||||||||||| |||| |||||||||| |||||||    
T  36018890 aac-aaccctaatttcaacccattttcccaatttcaccaa 36018852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 4055813 - 4055926
Alignment:
Q  24 ctctccaatccactatcaaatgagtt-cttacaaaagggatacaaaag-ggttacaagaaattagcttg-acaagttcaccatgaacaaaccctaatttc 120  Q
    |||| |||||||||||||| |||||| |||||||| | |||||||||| ||||||||||||||| |||  |||||||| ||| ||||||  |||||||||    
T  4055813 ctcttcaatccactatcaa-tgagtttcttacaaa-gagatacaaaagaggttacaagaaattaacttttacaagttctccaagaacaa--cctaatttc 4055908  T
Q  121 tacccttttcccaatctc 138  Q
    ||||| ||||||||||||    
T  4055909 tacccatttcccaatctc 4055926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 40913434 - 40913352
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaatta 85  Q
    |||| ||||| ||||||||||  |||||||||||||||||  |||||||||||| |||| |||||||| | ||||||||||||||    
T  40913434 cctaatctgggggagagattgatctctccaatccactatc-gatgagttcttac-aaagagatacaaatgagttacaagaaatta 40913352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 55302006 - 55302079
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaat 83  Q
    ||||||||||||||  ||||||||||||||||| ||||| ||||||| |||| ||||||||  |||||||||||||    
T  55302006 tggaggagagattgatctctccaatccactatc-aatgaattcttac-aaagagatacaaataggttacaagaaat 55302079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 9666516 - 9666632
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    |||||||||||||||||||| || ||||||| |||| | || ||| | ||||||||||||||||||  ||||| |||| | |||||||  ||||||||||    
T  9666516 ctctccaatccactatcaaa-gaattcttac-aaagaggtataaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaatctaatttcta 9666613  T
Q  123 ccc-ttttcccaatctcac 140  Q
    ||| |||| ||||||||||    
T  9666614 cccatttttccaatctcac 9666632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 47304381 - 47304254
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||| |||||||||||||  ||| |||||| | ||||||||||| |||| |||  ||||| |||| | |||| ||    
T  47304381 ggagagattgatctctccaatccactatc-aatgagttcttac-gaagagatacagatgggttacaagatattaacttcaacaagctcacaaagaac-aa 47304285  T
Q  111 ccctaatttctaccc-ttttcccaatctcac 140  Q
    || |||||||||||| ||||| |||||||||    
T  47304284 ccataatttctacccattttctcaatctcac 47304254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 23391959 - 23392077
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    |||| ||||||||||||||| |||||||| |||| | |||||||| |||||||||||||||| |||  ||||| |||| | ||||||| | |||||||||    
T  23391959 ctctacaatccactatcaaa-gagttcttgcaaa-gtgatacaaatgggttacaagaaattatcttaaacaagctcacaaagaacaaa-cttaatttcta 23392055  T
Q  123 c-ccttttcccaatctcaccaa 143  Q
    | | ||||||||| ||||||||    
T  23392056 ctcattttcccaaactcaccaa 23392077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 4386942 - 4386875
Alignment:
Q  55 aaaagggatacaaaagggttacaagaaattagcttgacaagttcaccatgaacaaaccctaatttctac 123  Q
    ||||| |||||||| |||||||||||||||||||| | ||| |||| | ||||||| ||||||||||||    
T  4386942 aaaagtgatacaaatgggttacaagaaattagctt-aaaagctcacaaagaacaaaacctaatttctac 4386875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 35138746 - 35138868
Alignment:
Q  15 gagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccc 113  Q
    |||||||| |||| | |||||||||||| |||||||||   |||| |||||||||| ||| |||||||||| |||  ||||  |||||| ||||||| |     
T  35138746 gagattgttctcttccatccactatcaa-tgagttctttacaaagagatacaaaagagttgcaagaaattaacttcaacaaactcaccaagaacaaa-ca 35138843  T
Q  114 taatttctacccttttcccaatctc 138  Q
    |||||||||||| |||| |||||||    
T  35138844 taatttctacccatttctcaatctc 35138868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 1313854 - 1313968
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaacaaaccctaatttcta 122  Q
    ||||| |||||| |||||| |||||||||   ||||  |||||||||| || |||||||||||| || ||||| || ||| ||||||| | |||||| ||    
T  1313854 ctctctaatccaatatcaa-tgagttcttttcaaagatatacaaaaggcttgcaagaaattagctttaacaagctctccaagaacaaaacataattttta 1313952  T
Q  123 cccttttcccaatctc 138  Q
    |||||||| |||||||    
T  1313953 cccttttctcaatctc 1313968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 143
Target Start/End: Original strand, 51352150 - 51352278
Alignment:
Q  13 gagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaa-gttcaccatgaacaaac 111  Q
    |||||||||  ||||| |||||||| |||| |||||| ||||||| |  ||||||| || ||||||||||||| ||| | || | |||| ||||||||||    
T  51352150 gagagattgatctctcaaatccactctcaa-tgagttattacaaa-gaaatacaaatgg-ttacaagaaattaactttaaaaagctcacaatgaacaaac 51352246  T
Q  112 cctaatttctacccttttcccaatctcaccaa 143  Q
    ||||| ||||| | |||||| |||||||||||    
T  51352247 cctaacttctatcattttcctaatctcaccaa 51352278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 5373321 - 5373247
Alignment:
Q  56 aaagggatacaaaagggttacaagaaattagcttga-caagttcaccatgaacaaaccctaatttctaccctttt 129  Q
    |||| |||| ||||||||||||| |||||||||| | |||| |||  | ||||||| ||||||||||||||||||    
T  5373321 aaagagatataaaagggttacaataaattagcttcaacaagctcaaaaagaacaaagcctaatttctaccctttt 5373247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 28253353 - 28253423
Alignment:
Q  62 atacaaaagggttacaagaaattagcttga-caagttcaccatgaacaaaccctaatttctacccttttcc 131  Q
    ||||||||  |||||||||||||| ||| | |||| |||| |||||| |||||||||||||||| ||||||    
T  28253353 atacaaaatcgttacaagaaattaacttcaacaagctcacaatgaacgaaccctaatttctaccattttcc 28253423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 31340266 - 31340369
Alignment:
Q  40 caaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctacc-cttttcccaatct 137  Q
    ||||||||||||||| |||| |||||||| | |||||| |||||||||||  ||||| |||| | |||| ||||  ||||||||||  ||||||||||||    
T  31340266 caaatgagttcttac-aaagagatacaaatgagttacatgaaattagcttcaacaagctcacaaagaac-aacctcaatttctaccaattttcccaatct 31340363  T
Q  138 caccaa 143  Q
    ||||||    
T  31340364 caccaa 31340369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 25690095 - 25689865
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcac 100  Q
    |||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25690095 cctactctggaggagagtttgtactctccaatccactatcaaa-gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacaagttcac 25689998  T
Q  101 catgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 200  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25689997 aatgaacaaaccctaatttctacctttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 25689898  T
Q  201 ctctaatcaaagaaccctaaaccctagagcttc 233  Q
    |||||||||||||||||||||||||||||||||    
T  25689897 ctctaatcaaagaaccctaaaccctagagcttc 25689865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 3439644 - 3439418
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||     
T  3439644 cctactctggaggagagattgtactctccaatccactatcaaa-gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgccaagttcat 3439547  T
Q  101 catgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3439546 aatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctttacaaggtgtttcccatgttttcaacccaagagata 3439447  T
Q  201 ctctaatcaaagaaccctaaaccctagag 229  Q
    |||||||||||||||||||||||||||||    
T  3439446 ctctaatcaaagaaccctaaaccctagag 3439418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 15290665 - 15290427
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  15290665 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacaatgttc 15290567  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||     
T  15290566 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagg 15290469  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  15290468 tactctaatcaaagaaccctaaaccctagagctttccctttg 15290427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 15471034 - 15470796
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  15471034 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacaatgttc 15470936  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||     
T  15470935 actatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagg 15470838  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  15470837 tactctaatcaaagaaccctaaaccctagagctttccctttg 15470796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 42575351 - 42575589
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaa-gttc 98  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  42575351 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacaatgttc 42575449  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagaga 198  Q
    || |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||     
T  42575450 actatgaacaatccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagg 42575547  T
Q  199 tactctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  42575548 tactctaatcaaagaaccctaaaccctagagctttccctttg 42575589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 2627877 - 2627649
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagg-gttacaagaaattagctt-gacaagttc 98  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||||||| ||| ||||||||| | ||| ||||||||||| || |||||||||    
T  2627877 cctactctggaggagagattgaactctccaatccactatcaa-tgagttcttacacaagagatacaaaaagagttgcaagaaattagatttgacaagttc 2627779  T
Q  99 accatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagag 197  Q
    || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||  |||||||||||    
T  2627778 acaatgaacaa-ccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagag 2627680  T
Q  198 atactctaatcaaagaaccctaaaccctagag 229  Q
    |  |||||||||||| || |||||||||||||    
T  2627679 aagctctaatcaaag-actctaaaccctagag 2627649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 34254358 - 34254586
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||| ||||||||||||  ||||||||||||||||||| | |||||||||||| | ||||||||||||||||||||||||| ||| ||||||||||    
T  34254358 cctactctagaggagagattgatctctccaatccactatcaa-taagttcttacaaa-gagatacaaaagggttacaagaaattaactttgacaagttca 34254455  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttttcaaccc 192  Q
    | | |||||| ||||||||||||||||||||||||||||||       ||||||||||||||||| || ||   |||||||||| | |||| | ||||||    
T  34254456 caaagaacaa-ccctaatttctacccttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtctccaaccc 34254554  T
Q  193 aagagatactctaatcaaagaaccctaaacccta 226  Q
    |||||| ||||||||||||| |||||||||||||    
T  34254555 aagaga-actctaatcaaag-accctaaacccta 34254586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 17982794 - 17982563
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||| | ||||||||||||    
T  17982794 cctactctggaggagagattgaactctccaatccactatc-aatgagttctt-ccaaagagatacaaaagggttacaagaaattaactttgacaagttca 17982697  T
Q  100 ccatgaacaaaccctaatttctaccc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaa 189  Q
    | | |||| |||||||||||||||||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  |||    
T  17982696 caaagaac-aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaa 17982598  T
Q  190 cccaagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  17982597 cccaagaga-actctaatcaaag-accctaaacccta 17982563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 44303996 - 44303764
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  44303996 cctactctggaggagagattgaactctccaatccactatc-aatgagttctta-aaaagagatacaaaaggattacaagaaattagctttgacaagttca 44303899  T
Q  100 ccatgaacaaaccctaatttctaccc---ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tca 188  Q
    | | |||| |||| ||||||||||||   |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  ||    
T  44303898 caaagaac-aaccttaatttctaccctttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttccca 44303800  T
Q  189 acccaagagatactctaatcaaagaaccctaaacccta 226  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  44303799 acccaagaga-actctaatcaaag-accctaaacccta 44303764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 31218398 - 31218167
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||| ||||||||||||| ||||||||| |||| | ||||||||||||||||||||||||||| ||||||||||||    
T  31218398 cctactctggaggagagattgaactctctaatccactatcaa-tgagttcttccaaa-gagatacaaaagggttacaagaaattagctttgacaagttca 31218301  T
Q  100 ccatgaacaaaccctaatttctacc--cttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaa 189  Q
    | | |||| ||||||||||||||||   |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  |||    
T  31218300 caaagaac-aaccctaatttctaccattttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaa 31218202  T
Q  190 cccaagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  31218201 cccaagaga-actctaatcaaag-accctaaacccta 31218167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 34256534 - 34256762
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||| ||||||||||||  ||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||| ||| ||||||||||    
T  34256534 cctactctagaggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattaactttgacaagttca 34256631  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttttcaaccc 192  Q
    | | |||||| |||||||||||||| |||| ||||||||||       ||||||||||||||||| || |    |||||||||| | |||||| ||||||    
T  34256632 caaagaacaa-ccctaatttctaccatttttccaatctcaccaatgaacaagacactcaatgattttcacacaccaaggtgtttacaatgtttccaaccc 34256730  T
Q  193 aagagatactctaatcaaagaaccctaaacccta 226  Q
    |||| | ||||||||||||| |||||||||||||    
T  34256731 aagata-actctaatcaaag-accctaaacccta 34256762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 42498335 - 42498193
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||  ||||||||||||||||||||||||||||  |||||||||    
T  42498335 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagaaatacaaaagggttacaagaaattagcttcaacaagttca 42498238  T
Q  100 ccatgaacaaaccctaatttctacc--cttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||   ||||||||||||||||||    
T  42498237 caaagaac-aaccctaatttctacctttttttcccaatctcaccaa 42498193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 15212927 - 15212786
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  |||||||||||| |||||| |||||||||||||| | |||||||| ||||||||||||||||||||  |||||||||    
T  15212927 cctaatctgggggagagattgatctctccaatccattatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttca 15212830  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  15212829 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 15212786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 19945386 - 19945618
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaag-ggttacaagaaattagc-ttgacaagttc 98  Q
    |||| ||| |||||||||||| |||||||||||||||||| ||||||||||| | |||| |||||||||| ||||||||||||||||| |||||||||||    
T  19945386 cctactctcgaggagagattgaactctccaatccactatc-aatgagttctt-ccaaagagatacaaaagtggttacaagaaattagctttgacaagttc 19945483  T
Q  99 accatgaacaaaccctaatttctaccc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tca 188  Q
    || | |||| |||| ||||||||||||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  |     
T  19945484 acaaagaac-aaccataatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccg 19945582  T
Q  189 acccaagagatactctaatcaaagaaccctaaacccta 226  Q
    |||||||||| ||||||||||||| || ||||||||||    
T  19945583 acccaagaga-actctaatcaaag-actctaaacccta 19945618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 1746253 - 1746371
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaa 106  Q
    |||||||||||||| |||||||||||||||||| |||||||||||   |||| ||||||||||||||||||||||||||| ||||||||||||| | |||    
T  1746253 tggaggagagattgaactctccaatccactatc-aatgagttctt--caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaa 1746349  T
Q  107 caaaccctaatttctaccctttt 129  Q
    | |||||||||||||||| ||||    
T  1746350 c-aaccctaatttctaccttttt 1746371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 33352291 - 33352150
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||| ||  |||||||||    
T  33352291 cctaatctgggggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaattaggttcaacaagttca 33352194  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||| ||||| ||||||||||||||||||    
T  33352193 caaagaac-aaccctaatttttacccattttcccaatctcaccaa 33352150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 42435018 - 42435159
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||   |||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||  ||||| |||    
T  42435018 cctactctggaggagagattgatttctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaattagcttcaacaagctca 42435115  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| |||| |||||||||||||    
T  42435116 caaagaac-aaccctaatttctacccatttttccaatctcaccaa 42435159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 9765863 - 9765745
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaacaaaccctaatttcta 122  Q
    ||||||||||||||||||| |||||||||||||| | |||||||| |||||||||||||||||| ||| |||| |||| | |||| ||||||||||||||    
T  9765863 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctttgccaagctcacaaagaac-aaccctaatttcta 9765767  T
Q  123 ccc-ttttcccaatctcaccaa 143  Q
    ||| ||||||||||||||||||    
T  9765766 cccattttcccaatctcaccaa 9765745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 30143476 - 30143346
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatg 104  Q
    ||||| ||||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||| | |    
T  30143476 tctgggggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaag 30143379  T
Q  105 aacaaaccctaatttctaccc-ttttcccaatct 137  Q
    ||| ||||||||||||||||| ||||||||||||    
T  30143378 aac-aaccctaatttctacccattttcccaatct 30143346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 4283665 - 4283524
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||| |||| |||||||  ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||    
T  4283665 cctactctagaggggagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctca 4283568  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | |  ||| ||||||||||||||||| ||||||||||||||||||    
T  4283567 caaaaaac-aaccctaatttctacccattttcccaatctcaccaa 4283524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 27811419 - 27811278
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  |||| |||||||||||||| || ||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||    
T  27811419 cctaatctgggggagagattgatctcttcaatccactatcaa-tgggttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctca 27811322  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  27811321 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 27811278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 43036564 - 43036423
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||| |||| |||||||| |  |||||||||||||| ||  |||||||||    
T  43036564 cctaatctggaggagagattgatctctcaaatccactatc-aatgagttcttac-aaagagatacaaatgaattacaagaaattagtttcaacaagttca 43036467  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  43036466 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 43036423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 129
Target Start/End: Original strand, 12702672 - 12702787
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  |||||||||||| |||||| |||||||||||||| | || ||||||||||||||||||||||||||  |||||||||| | |||| ||    
T  12702672 ggagagattgatctctccaatccaatatcaa-tgagttcttacaaa-gagacacaaaagggttacaagaaattagcttcaacaagttcacaaagaac-aa 12702768  T
Q  111 ccctaatttctaccctttt 129  Q
    |||||||||||||||||||    
T  12702769 ccctaatttctaccctttt 12702787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 18141950 - 18141821
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||| | ||||||     
T  18141950 ggagagattgatctctccaatccactatcaaa-gagttcttacaaa-gtgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa- 18141854  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
     |||||||||||||| ||||| ||||||||||||    
T  18141853 -cctaatttctacccattttcacaatctcaccaa 18141821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 40321221 - 40321082
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  |||||||||||||||||||| ||||| |||| |||| ||||| || |||||||||||||||| |||  ||||| |||    
T  40321221 cctaatctgggggagagattgatctctccaatccactatcaaa-gagtttttac-aaagagatactaatgggttacaagaaattaacttcaacaagctca 40321124  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcacc 141  Q
    | |||||| ||||||||||||||||| ||||||||||||||||    
T  40321123 caatgaac-aaccctaatttctacccattttcccaatctcacc 40321082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 40328921 - 40328782
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt-gacaagttc 98  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| ||||||||| | ||||||||||||||| ||  ||||| ||    
T  40328921 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaaatgagttacaagaaattagtttaaacaagctc 40328824  T
Q  99 accatgaacaaaccctaatttctaccc-ttttcccaatctcac 140  Q
    || | ||||||| |||||||||||||| |||||||||||||||    
T  40328823 acaaagaacaaa-cctaatttctacccattttcccaatctcac 40328782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 18655534 - 18655400
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaa 106  Q
    ||||||||||||||  ||||| ||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||| | |||    
T  18655534 tggaggagagattgatctctctaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaa 18655437  T
Q  107 caaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | |||| |||||||||||| ||||| ||||||||||||    
T  18655436 c-aaccttaatttctacccattttctcaatctcaccaa 18655400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 30291737 - 30291606
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  |||||||||||||||||||| || ||||||| |||| |||||||| | ||||||||||||||||||  ||||| |||| | |||||||    
T  30291737 ggagagattgatctctccaatccactatcaaa-gaattcttac-aaagtgatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaa 30291640  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
     |||||||||||||| ||||| ||||||||||||    
T  30291639 acctaatttctacccattttctcaatctcaccaa 30291606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 40221886 - 40221745
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| || |||||||||| |||| |||||||| ||||||||||||||||| ||  ||||| |||    
T  40221886 cctaatctgggggagagattgatctctccaatccactatc-aacgagttcttac-aaagagatacaaatgggttacaagaaattagtttcaacaagctca 40221789  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| |||| |||||||||||||    
T  40221788 caaagaac-aaccctaatttctacccattttaccaatctcaccaa 40221745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 143
Target Start/End: Complemental strand, 4731794 - 4731658
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatg 104  Q
    ||||| |||||||| |  ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||| ||  ||||| |||| | |    
T  4731794 tctgggggagagatcgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattaggttcaacaagctcacaaag 4731697  T
Q  105 aacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | ||||||||||||||||| ||||||||||||||||||    
T  4731696 agc-aaccctaatttctacccattttcccaatctcaccaa 4731658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 44353923 - 44353796
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  || | |||||||||||||| |||||||||||||| | |||||||| | ||||||||||||||||||  |||||||||| | |||| ||    
T  44353923 ggagagattgatcttttcaatccactatcaa-tgagttcttacaaa-gagatacaaatgtgttacaagaaattagcttcaacaagttcacaaagaac-aa 44353827  T
Q  111 ccctaatttctaccc-ttttcccaatctcac 140  Q
    ||||||||||||||| |||||||||||||||    
T  44353826 ccctaatttctacccattttcccaatctcac 44353796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 5689407 - 5689326
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    ||||| ||||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||    
T  5689407 tctgggggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctt 5689326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 6599102 - 6598975
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||| ||||||||||||| ||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| || | | |||||||    
T  6599102 ggagagattgatctctctaatccactatcaa-tgagttcttacaaaagt-atacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaa 6599005  T
Q  111 ccctaatttctaccc-ttttcccaatctcac 140  Q
     | |||||||||||| |||||||||||||||    
T  6599004 -cttaatttctacccattttcccaatctcac 6598975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 6674555 - 6674428
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||| ||||||||||||| ||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| || | | |||||||    
T  6674555 ggagagattgatctctctaatccactatcaa-tgagttcttacaaaagt-atacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaa 6674458  T
Q  111 ccctaatttctaccc-ttttcccaatctcac 140  Q
     | |||||||||||| |||||||||||||||    
T  6674457 -cttaatttctacccattttcccaatctcac 6674428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 3303708 - 3303838
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  |||| |||||||||||| ||||||||||||| |||| |||||||| | ||||||||||||||| ||  ||||| |||| | |||||||    
T  3303708 ggagagattgatctcttcaatccactatc-aatgagttcttac-aaagagatacaaatgagttacaagaaattaggttaaacaagctcacaaagaacaaa 3303805  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
     | |||||||||||| ||||||||||||||||||    
T  3303806 -cttaatttctacccattttcccaatctcaccaa 3303838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 8965741 - 8965859
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttga-caagttcaccatgaacaaaccctaatttcta 122  Q
    |||||| || ||||||||| |||||||||||||| | |||| |||||||||| ||||||||| ||| | |||  |||  | |||||||||||||||||||    
T  8965741 ctctccgatgcactatcaa-tgagttcttacaaa-gagatataaaagggttataagaaattaacttcaacaaactcataaagaacaaaccctaatttcta 8965838  T
Q  123 cccttttcccaatctcaccaa 143  Q
    || ||||||||||||||||||    
T  8965839 cctttttcccaatctcaccaa 8965859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 143
Target Start/End: Original strand, 19491755 - 19491867
Alignment:
Q  30 aatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctaccc-tt 127  Q
    |||||||||||||  ||||||||||||| | |||||||| ||||||||||||||||| ||  ||||| |||| | ||||||| |||||||||||||| ||    
T  19491755 aatccactatcaac-gagttcttacaaa-gagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaa-cctaatttctacccatt 19491851  T
Q  128 ttcccaatctcaccaa 143  Q
    ||||||||||||||||    
T  19491852 ttcccaatctcaccaa 19491867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 10930226 - 10930365
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| |||| |||||||| |||| |||| ||| ||||||||||||||||||||  || || |||    
T  10930226 cctaatctgggggagagattgatctctccaatccactatc-aatgtgttcttac-aaagagatataaatgggttacaagaaattagcttcaacgagctca 10930323  T
Q  100 ccatgaacaaaccctaatttcta-cccttttcccaatctcacc 141  Q
    | | || | |||||||||||||| || ||||||||||||||||    
T  10930324 caaagagc-aaccctaatttctatccattttcccaatctcacc 10930365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 1345398 - 1345536
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| |||||||||| ||||| |||||||||||| ||||||||||| | |||| |||||| | ||||||||||||||||||||  | ||  |||    
T  1345398 cctactctgggggagagattgaactcttcaatccactatc-aatgagttctttc-aaagagatacatatgggttacaagaaattagcttcaataaactca 1345495  T
Q  100 ccatgaacaaaccctaatttctac-ccttttcccaatctcac 140  Q
    | | |||| ||||||||||||||| | |||||||||||||||    
T  1345496 caaagaac-aaccctaatttctacacattttcccaatctcac 1345536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 41366652 - 41366727
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||| ||||||||||  ||||| |||||||||||||    
T  41366652 ggagagattgatctctccaatccactat-aaatgagttcttacaaa-gggatacaaataggttaaaagaaattagctt 41366727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 1292514 - 1292631
Alignment:
Q  25 tctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctac 123  Q
    |||| ||||||||||||| |||||||||||||| | |||||||| | ||||||||||||||||||  ||||| |||| | ||||||| | ||||||||||    
T  1292514 tctcaaatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaa-cttaatttctac 1292610  T
Q  124 cc-ttttcccaatctcaccaa 143  Q
    || ||||| ||||||||||||    
T  1292611 ccattttctcaatctcaccaa 1292631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 11384126 - 11383989
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||||||||||| |   ||||||||||| |||||| || ||||||||||| | |||||||| | ||||||||||||||||||  ||||  |||    
T  11384126 cctactctggaggagagatcgatgtctccaatccagtatcaa-tgggttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaaactca 11384029  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctca 139  Q
    | | |||| ||||||||||||||||| |||| |||||||||    
T  11384028 caaagaac-aaccctaatttctacccatttttccaatctca 11383989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 1822375 - 1822297
Alignment:
Q  61 gatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctacccttttcccaatctc 138  Q
    |||| ||||||||||||||||||||||||  ||||| |||| | ||||||||| ||||||||| ||||||  |||||||    
T  1822375 gatataaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccataatttctatcctttttgcaatctc 1822297  T

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Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 1856820 - 1856742
Alignment:
Q  61 gatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctacccttttcccaatctc 138  Q
    |||| ||||||||||||||||||||||||  ||||| |||| | ||||||||| ||||||||| ||||||  |||||||    
T  1856820 gatataaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccataatttctatcctttttgcaatctc 1856742  T

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Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 138
Target Start/End: Original strand, 29796358 - 29796485
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttctt--acaaaagggatacaaaagggttacaagaaattagcttga-caagttcaccatgaaca 108  Q
    ||||||||||  |||||||||||| ||| ||||||||| ||  |||||  || |||||||  |||||||||||| ||||| | ||||||| ||| |||||    
T  29796358 ggagagattgatctctccaatccattat-aaatgagtttttttacaaatagg-tacaaaaatgttacaagaaatcagcttcaacaagttctccaagaaca 29796455  T
Q  109 aaccctaatttctacccttttcccaatctc 138  Q
    |||| | |||||||| ||||||||||||||    
T  29796456 aaccttgatttctactcttttcccaatctc 29796485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 18106108 - 18106191
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    |||||||||| ||||||||||  |||||||| | |||||||| ||||||||||||||||  ||||||| | ||||||||||||||||||    
T  18106108 cctattctgg-ggagagattgatctctccaaac-actatcaa-tgagttcttacaaaag--atacaaatgagttacaagaaattagctt 18106191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 4743252 - 4743306
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaa 67  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||| ||| |||||    
T  4743252 ggagagattgatctctccaatccactatc-aatgagttcttacaaatgggttacaa 4743306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 138
Target Start/End: Complemental strand, 7597745 - 7597619
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||| ||||  |||||   |||| ||||||||||| ||| |||||||||||||  ||||| || ||| |||||||    
T  7597745 ggagagattgatctctccaatccactatc-aatgcattctttacaaagagatacaaaaggattataagaaattagcttcaacaagctctccaagaacaaa 7597647  T
Q  111 ccctaatttctacccttttcccaatctc 138  Q
     ||| |||| | | ||||| ||||||||    
T  7597646 acctgatttattctctttttccaatctc 7597619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 4162626 - 4162516
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||   |||||||||| ||||||| |||||||||||||| | |||||||| | ||||||||||||||||||  |||||||| | | |||||||    
T  4162626 ggagagattgatatctccaatcc-ctatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagttctcaaagaacaaa 4162530  T
Q  111 ccctaatttctaccc 125  Q
     ||||| ||||||||    
T  4162529 -cctaacttctaccc 4162516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 10015198 - 10015136
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    ||||||||||||||||||| ||||||| ||  |||| |||||||| | ||||||||||||||||||    
T  10015198 ctctccaatccactatcaa-tgagttccta--aaagagatacaaatgagttacaagaaattagctt 10015136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 11712038 - 11712114
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    ||||||||||  |||| |||||||||||||| |||||| ||   |||| |||| ||||||||| ||||||||||||||    
T  11712038 ggagagattgatctcttcaatccactatcaa-tgagttatttacaaagagatataaaagggtttcaagaaattagctt 11712114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 41267051 - 41266982
Alignment:
Q  62 atacaaaagggttacaagaaattag-cttgacaagttcaccatgaacaaaccctaatttctacccttttc 130  Q
    ||||||||| ||||||||||||||| ||  |||||||| | | ||||||| ||||||||||||| |||||    
T  41267051 atacaaaagagttacaagaaattagtctcaacaagttctctaagaacaaaacctaatttctaccattttc 41266982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 139
Target Start/End: Original strand, 41364927 - 41365011
Alignment:
Q  56 aaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctacc-cttttcccaatctca 139  Q
    ||||||||||||| | ||||||||||||||||||  ||||  |||| | ||||||| |||||||||||||  ||||||||||||||    
T  41364927 aaagggatacaaatgtgttacaagaaattagcttaaacaaactcacaaagaacaaa-cctaatttctaccaattttcccaatctca 41365011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 3073911 - 3073981
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaatt 84  Q
    ||||||||||  |||||||| ||| |||||| |||||||||||||| | |||||||||  |||||||||||||    
T  3073911 ggagagattgatctctccaagccattatcaa-tgagttcttacaaa-gagatacaaaaatgttacaagaaatt 3073981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 9036557 - 9036320
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcac 100  Q
    |||| ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9036557 cctactctcgaggagagattgtactcttcaatccactatcaaa-gagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacaagttcac 9036460  T
Q  101 catgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9036459 aatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagata 9036360  T
Q  201 ctctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  9036359 ctctaatcaaagaaccctaaaccctagagttgcccctttg 9036320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 44203773 - 44203536
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  44203773 cctactctggaggagagattgtactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttacaagaaattagcttgacaagttca 44203675  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  44203674 ctatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagat 44203577  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44203576 actctaatcaaagaaccctaaaccctagagcttcccctttg 44203536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 40282518 - 40282291
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || ||||||||||    
T  40282518 cctactctggaggagagattgtactctccaatccactatcaaa-gagttcttacaaaagggatacaaaagg-ttacaagaaattagattagacaagttca 40282421  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  40282420 caatgaactaaccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagat 40282321  T
Q  200 actctaatcaaagaaccctaaaccctagag 229  Q
    ||||||||||||||||||||||||||||||    
T  40282320 actctaatcaaagaaccctaaaccctagag 40282291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 9987342 - 9987116
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| || ||||||||||| || ||||||||||    
T  9987342 cctactctggaggagagattgtactctccaatccactatcaa-tgagttcttgcaaaagggatacaaaagg-ttgcaagaaattagattagacaagttca 9987245  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  9987244 caatgaacaa-ccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagat 9987146  T
Q  200 actctaatcaaagaaccctaaaccctagag 229  Q
    ||||||||||||||||||||||||||||||    
T  9987145 actctaatcaaagaaccctaaaccctagag 9987116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 21054099 - 21053872
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| || ||||||||||    
T  21054099 cctactctggaggagagtttgtactctccaatccactatcaaa-gagttcttacaaaagggatacaaaagg-ttgcaagaaattagatttgacaagttca 21054002  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||    
T  21054001 caatgaacaaaccctaatttctacacttttcccaatctcaccaagacactcaatgattttttctctacaaggtgtttcccatgttttcaacccaagagat 21053902  T
Q  200 actctaatcaaagaaccctaaaccctagag 229  Q
    ||||||||||||||||||||||||||||||    
T  21053901 actctaatcaaagaaccctaaaccctagag 21053872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 20622264 - 20622492
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaa--gggatacaaaagggttacaagaaattagctt-gacaagtt 97  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| |||||||||||||| || ||||||||    
T  20622264 cctactctggaggagagattgtactctccaatccactatcaaa-gagttcttacaaaaaagggatacaaaagg-ttacaagaaattagatttgacaagtt 20622361  T
Q  98 caccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagag 197  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| || || |||||||||||||||||||||||||||||||||    
T  20622362 cacaatgaacaa-ccctaatttctacccttttcccaatctcaccaagacagtcaatgattttccctctacaaggtgtttcccatgttttcaacccaagag 20622460  T
Q  198 atactctaatcaaagaaccctaaaccctagag 229  Q
    ||||||||||||||||||||||||||||||||    
T  20622461 atactctaatcaaagaaccctaaaccctagag 20622492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 51765538 - 51765302
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagc-ttgacaagttc 98  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  51765538 cctactctggaggagagattgaactctccaatccactatc-aatgagttcttacaaaagagatacaaaaggggttacaagaaattagctttgacaagttc 51765440  T
Q  99 accatgaacaaaccctaatttctacccttt--tcccaatctcac------caagacactcaatgattctctctttacaaggtgtttcccatgttttcaac 190  Q
    || | |    ||||||||||||||||||||  ||||||||  ||      |||||||||||||||||  | ||   |||||||||| | |||||| ||||    
T  51765439 acaaaggtacaaccctaatttctacccttttctcccaatcaaaccaagaacaagacactcaatgatttacactcaccaaggtgtttacaatgtttccaac 51765340  T
Q  191 ccaagagatactctaatcaaagaaccctaaaccctagag 229  Q
    ||||||||  |||||||||||| ||||||||||||||||    
T  51765339 ccaagagaagctctaatcaaag-accctaaaccctagag 51765302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 13316379 - 13316521
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||||| ||||||||||||    
T  13316379 cctactctggaggagagattgaactctccaatccactatc-aatgagttctt-ccaaagagatacaaaagggttacaagaaattagctttgacaagttca 13316476  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaag 144  Q
    | | |||| ||||||||||||||||| |||||||||||||||||||    
T  13316477 caaagaac-aaccctaatttctaccctttttcccaatctcaccaag 13316521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 20762813 - 20762582
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||| |||||||||||  ||||||||||||||||||| ||||||||||| || | ||||||||||||||||||||||||||| ||||||||||||    
T  20762813 cctactctgtaggagagattgatctctccaatccactatcaa-tgagttcttacgaa-gagatacaaaagggttacaagaaattagctttgacaagttca 20762716  T
Q  100 ccatgaacaaaccctaatttctaccc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaa 189  Q
    | | |||| |||||||||||||||||  ||||| |||||||||       ||||| ||||||||||| || ||   |||||||||| | ||||||  |||    
T  20762715 caaagaac-aaccctaatttctacccttttttctcaatctcaccaatgaacaagatactcaatgattttcactcaccaaggtgtttacaatgtttcccaa 20762617  T
Q  190 cccaagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  20762616 cccaagaga-actctaatcaaag-accctaaacccta 20762582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 8550814 - 8550952
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||| | ||||||||||||||||||  ||||| |||    
T  8550814 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagggatacaaatgagttacaagaaattagcttaaacaagctca 8550911  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcac 140  Q
    | | ||||||| |||||||||||||| |||||||||||||||    
T  8550912 caaagaacaaa-cctaatttctacccattttcccaatctcac 8550952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 37168439 - 37168297
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt-gacaagttc 98  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||||  ||||| ||    
T  37168439 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaaatgggttacaagaaattagcttaaacaagctc 37168342  T
Q  99 accatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    || | |||| ||||||||||||||||| ||||||||||||||||||    
T  37168341 acaaagaac-aaccctaatttctacccattttcccaatctcaccaa 37168297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 13547116 - 13547257
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||| ||||||  ||||| |||    
T  13547116 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaaatagcttcaacaagctca 13547213  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  13547214 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 13547257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 28220253 - 28220394
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||  |||||||||    
T  28220253 cctaatctgggggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaattagcttcaacaagttca 28220350  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| |||||| |||||||||||    
T  28220351 caaagaac-aaccctaatttctacccattttccgaatctcaccaa 28220394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 47255367 - 47255508
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||  ||||| |||    
T  47255367 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaattagcttcaacaagctca 47255464  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| |||| |||||||||||||    
T  47255465 caaagaac-aaccctaatttctacccatttttccaatctcaccaa 47255508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 3156995 - 3156776
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  |||||||||| | |||| ||    
T  3156995 ggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aa 3156899  T
Q  111 ccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatac 201  Q
    ||||||||||||||| ||||| |||||||||       ||||||||||||||||| || ||   || ||||||| | |||||| | ||||||||||| ||    
T  3156898 ccctaatttctacccattttctcaatctcaccaatgaacaagacactcaatgattttcactcaccagggtgtttacaatgtttccaaacccaagaga-ac 3156800  T
Q  202 tctaatcaaagaaccctaaacccta 226  Q
    ||||||||||| ||||| |||||||    
T  3156799 tctaatcaaag-accctcaacccta 3156776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 49918480 - 49918350
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  |||||||||| | |||| ||    
T  49918480 ggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aa 49918384  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| ||||| ||||||||||||    
T  49918383 ccctaatttctacccattttctcaatctcaccaa 49918350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 11348839 - 11348698
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||  |||| |||||||| ||||||||||||||||||||  ||||| |||    
T  11348839 cctactctggaggagagattgatctctccaatccactatc-aatgagttctta-gaaagagatacaaatgggttacaagaaattagcttcaacaagctca 11348742  T
Q  100 ccatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||  ||||||||||||||||||    
T  11348741 caaagaac-aaccctaatttctaccaattttcccaatctcaccaa 11348698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 13549027 - 13549168
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaatta-gcttgacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| |||||||| ||||||| | || ||||| |||    
T  13549027 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacatgaaattaggtttaacaagctca 13549124  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  13549125 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 13549168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 28265581 - 28265722
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  |||||||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||||||  ||||| |||    
T  28265581 cctaatctgggggagagattgatctctccaatccactatcaaa-gagttcttac-aaagagatacaaatgggttacaagaaattagcttcaacaagctca 28265678  T
Q  100 ccatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 143  Q
    | |||||| ||||||||||||||||  ||||||||||||| ||||    
T  28265679 caatgaac-aaccctaatttctacctattttcccaatctcgccaa 28265722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 44455301 - 44455160
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| |||||||||||||||||  |||||||| | ||||||||||||||| ||  |||||||||    
T  44455301 cctaatctgggggagagattgatctctccaatccactatc-aatgagttcttacaaaa-agatacaaatgagttacaagaaattagtttcaacaagttca 44455204  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  44455203 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 44455160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 834194 - 834332
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| |||||||| |  ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||  ||||| |||    
T  834194 cctactctgggggagagatagatctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctca 834291  T
Q  100 ccatgaacaaaccctaatttcta-cccttttcccaatctcac 140  Q
    | | |||| |||||||||||||| || |||||||||||||||    
T  834292 caaagaac-aaccctaatttctatccattttcccaatctcac 834332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 3189471 - 3189330
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||| |||||||||  ||||||||||||||||| |||||||||||||||||  |||||||||| |||||| |||||||||||  |||||||||    
T  3189471 cctactctggatgagagattgatctctccaatccactatc-aatgagttcttacaaaa-agatacaaaagagttacaggaaattagcttcaacaagttca 3189374  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||| ||||| |||||| |||||||||||    
T  3189373 caaagaac-aaccctaatttataccctttttccaaatctcaccaa 3189330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 3198288 - 3198147
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||| |||||||||  ||||||||||||||||| |||||||||||||||||  |||||||||| |||||| |||||||||||  |||||||||    
T  3198288 cctactctggatgagagattgatctctccaatccactatc-aatgagttcttacaaaa-agatacaaaagagttacaggaaattagcttcaacaagttca 3198191  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||| ||||| |||||| |||||||||||    
T  3198190 caaagaac-aaccctaatttataccctttttccaaatctcaccaa 3198147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 3207127 - 3206986
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||| |||||||||  ||||||||||||||||| |||||||||||||||||  |||||||||| |||||| |||||||||||  |||||||||    
T  3207127 cctactctggatgagagattgatctctccaatccactatc-aatgagttcttacaaaa-agatacaaaagagttacaggaaattagcttcaacaagttca 3207030  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||| ||||| |||||| |||||||||||    
T  3207029 caaagaac-aaccctaatttataccctttttccaaatctcaccaa 3206986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 29136388 - 29136247
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||| ||| ||||||||||||| ||||  ||||||| ||||| ||||||||||||||  ||||| |||    
T  29136388 cctactctggaggagagattgatctctccaatccacgatc-aatgagttcttac-aaagaaatacaaatgggttccaagaaattagcttcaacaagctca 29136291  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  29136290 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 29136247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 31925734 - 31925875
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||| ||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||  ||||| |||    
T  31925734 cctactctagaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaattagcttcaacaagctca 31925831  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | |||||| | ||||||||||||||| |||| ||| |||||||||    
T  31925832 caatgaac-atccctaatttctacccatttttccactctcaccaa 31925875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 4552675 - 4552805
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  |||||||||||| |||||| |||||||||||||| |||||||||| ||||||||||||||||||||  ||||| |||| | | |||||    
T  4552675 ggagagattgatctctccaatccattatcaa-tgagttcttacaaa-gggatacaaaggggttacaagaaattagcttcaacaagctcacaaaggacaaa 4552772  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
     |||||||||||||| ||||| ||||||||||||    
T  4552773 -cctaatttctacccattttctcaatctcaccaa 4552805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 7482257 - 7482399
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt-gacaagttc 98  Q
    |||| |||| |||||||||||  ||||||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||||  ||||| ||    
T  7482257 cctactctgaaggagagattgatctctccaattcactatc-aatgagttcttac-aaagagatacaaaatgggttacaagaaattagcttaaacaagctc 7482354  T
Q  99 accatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    || | |||| ||||||||||||||||| ||| ||||||||||||||    
T  7482355 acaaagaac-aaccctaatttctacccatttacccaatctcaccaa 7482399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 23555303 - 23555433
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    |||||||||| |||||||||||||||||| ||||||||||||| |||| |||||||| | |||| |||||||||| ||  |||||||||| | |||| ||    
T  23555303 ggagagattgaactctccaatccactatc-aatgagttcttac-aaagagatacaaatgagttataagaaattagtttcaacaagttcacaaagaac-aa 23555399  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| |||| |||||||||||||    
T  23555400 ccctaatttctacccatttttccaatctcaccaa 23555433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 28223459 - 28223589
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  |||||||||  | || | ||    
T  28223459 ggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcagaaagatc-aa 28223555  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    || |||||||||||| ||||||||||||||||||    
T  28223556 ccataatttctacccattttcccaatctcaccaa 28223589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 143
Target Start/End: Original strand, 37503589 - 37503722
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatg 104  Q
    ||||| ||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||   |||||||||||||||||||  |||||||||| | |    
T  37503589 tctgggggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaa---ggttacaagaaattagcttcaacaagttcacaaag 37503683  T
Q  105 aacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||| ||||||||||| ||||| ||||||||||||||||||    
T  37503684 aac-aaccctaatttttacccattttcccaatctcaccaa 37503722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 1833663 - 1833522
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaag-ttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| | |||||||||| ||||||| |  || ||||    
T  1833663 cctaatctggtggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgagttacaagaatttagcttcaatagattca 1833566  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| ||||||||||||||||||    
T  1833565 caaagaac-aaccctaatttctacccattttcccaatctcaccaa 1833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 42298002 - 42298143
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  |||| |||||||||||| ||||||||||||| |||| |||||||| | ||||||||||||||||||  ||||| |||    
T  42298002 cctactctggaggagagattgatctcttcaatccactatc-aatgagttcttac-aaagagatacaaatgagttacaagaaattagcttcaacaagctca 42298099  T
Q  100 ccatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 143  Q
    | |  ||| ||||||||||||||||  ||||||||||||||||||    
T  42298100 caaaaaac-aaccctaatttctaccaattttcccaatctcaccaa 42298143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 19754625 - 19754494
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||| ||||||||||||| |||| ||||||||  |||||||||||||||||||  ||||| |||| | |||| ||    
T  19754625 ggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatcggttacaagaaattagcttcaacaagctcacaaagaac-aa 19754529  T
Q  111 ccctaatttctaccc--ttttcccaatctcaccaa 143  Q
    |||||||||||||||  ||||| ||||||||||||    
T  19754528 ccctaatttctacccatttttctcaatctcaccaa 19754494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 143
Target Start/End: Original strand, 50167207 - 50167343
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatg 104  Q
    ||||| ||||||||||  ||||||||||||||||||| |||||| ||||||| | |||||||| |||||||||||||||||| |||||||| |||| |      
T  50167207 tctgggggagagattgatctctccaatccactatcaa-tgagtttttacaaa-gagatacaaatgggttacaagaaattagctttgacaagctcacaaat 50167304  T
Q  105 aacaaaccctaatttctac-ccttttcccaatctcaccaa 143  Q
    ||| |||||||||||||||   ||||||||||||||||||    
T  50167305 aac-aaccctaatttctactaattttcccaatctcaccaa 50167343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 31659368 - 31659238
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||||| | |||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||| | |||| |     
T  31659368 ggagagattgatctctccaatccactatcaa-taagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-ag 31659272  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| |||| |||||||||||||    
T  31659271 ccctaatttctacccatttttccaatctcaccaa 31659238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 47115313 - 47115171
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt-gacaagttc 98  Q
    |||| ||||||| ||||||||  ||||||||||||||||| |||| ||| |||| |||| ||||||||| ||||||||||||||||||||  ||||| ||    
T  47115313 cctactctggagcagagattgatctctccaatccactatc-aatgggtttttac-aaagagatacaaaatgggttacaagaaattagcttaaacaagctc 47115216  T
Q  99 accatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 143  Q
    || | |||| ||||||||||||||||  ||||||||||||||||||    
T  47115215 acaaagaac-aaccctaatttctaccaattttcccaatctcaccaa 47115171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 50169248 - 50169378
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaacaaa 110  Q
    ||||||||||  |||| |||||||||||||| ||||| |||||||| | |||||||| | |||||||||||||||| |||||||| |||| | |||| ||    
T  50169248 ggagagattgatctcttcaatccactatcaa-tgagtacttacaaa-gagatacaaatgagttacaagaaattagctttgacaagctcacaaagaac-aa 50169344  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| |||| |||||||||||||    
T  50169345 ccctaatttctacccatttttccaatctcaccaa 50169378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 45644381 - 45644523
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| ||||| ||||| ||||  ||||||||||||||||| ||||||||||||| |||| |||||||| | ||| |||||||||||| |||||||| |||    
T  45644381 cctaatctgggggagatattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgagttgcaagaaattagctttgacaagctca 45644478  T
Q  100 ccatgaacaaaccctaatttcta-cccttttcccaatctcaccaa 143  Q
    | | ||||||| | ||||||||| || ||||| ||||||||||||    
T  45644479 caaagaacaaaacttaatttctatccattttctcaatctcaccaa 45644523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 37559906 - 37560037
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt--gacaagttcaccatgaacaa 109  Q
    ||||||||||  ||||||||| |||||||||  ||||||||||||| | |||||||| ||||||||||||||||||||   |||||||||| | |||| |    
T  37559906 ggagagattgatctctccaattcactatcaac-gagttcttacaaa-gagatacaaatgggttacaagaaattagctttcaacaagttcacaaagaac-a 37560002  T
Q  110 accctaatttctaccc-ttttcccaatctcaccaa 143  Q
    || ||||||||||||| |||||| |||||||||||    
T  37560003 actctaatttctacccattttcctaatctcaccaa 37560037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 3847171 - 3847286
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| || |||||||  ||||  |||| | |||| ||||||||||||||    
T  3847171 ctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttacaaaaatttagcttaaacaaactcacaaagaac-aaccctaatttcta 3847267  T
Q  123 ccc-ttttcccaatctcac 140  Q
    ||| |||||||||||||||    
T  3847268 cccattttcccaatctcac 3847286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 37033122 - 37033241
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttct 121  Q
    ||||||||||||||||| ||||||||||||| |||| ||| ||||| || |||||||||||||||||  ||||| |||| | |||| |||||||||||||    
T  37033122 ctctccaatccactatc-aatgagttcttac-aaagagatgcaaaatggattacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttct 37033218  T
Q  122 accc-ttttcccaatctcaccaa 143  Q
    |||| ||||||||||||||||||    
T  37033219 acccattttcccaatctcaccaa 37033241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 34603718 - 34603576
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa-gggttacaagaaattagctt-gacaagttc 98  Q
    |||| ||||||||||||||||  |||| |||||||| ||| ||||||||||||| |||| |||| |||| ||||||||||||||||||||  ||||| ||    
T  34603718 cctactctggaggagagattgatctcttcaatccaccatc-aatgagttcttac-aaagagataaaaaatgggttacaagaaattagcttaaacaagctc 34603621  T
Q  99 accatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    || | |||| ||||||||||||||||| ||||  ||||||||||||    
T  34603620 acaaagaac-aaccctaatttctacccattttttcaatctcaccaa 34603576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 143
Target Start/End: Complemental strand, 193747 - 193611
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatg 104  Q
    ||||||| ||||||||  ||||||||||||||||| |||||||| |||| |||| |||||||| | ||||||||||||||||||  ||||| | |  | |    
T  193747 tctggagaagagattgatctctccaatccactatc-aatgagttattac-aaagagatacaaatgagttacaagaaattagcttcaacaagctaataaag 193650  T
Q  105 aacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||| ||||||||||||||||| ||||| ||||||||||||    
T  193649 aac-aaccctaatttctacccattttctcaatctcaccaa 193611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 226
Target Start/End: Original strand, 196958 - 197166
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| | |||||||||||||| |||  ||||| |||| | |||| ||||||||||||||    
T  196958 ctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgagttacaagaaattaacttaaacaagctcacaaagaac-aaccctaatttcta 197054  T
Q  123 cc-cttttcccaatctcac-------caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaag 212  Q
    ||  ||||| |||||||||       ||||||||||||||||| || ||    |||||||||| | ||||||  |||||||||||| |||||||||||||    
T  197055 ccaattttctcaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag 197153  T
Q  213 aaccctaaacccta 226  Q
     ||||| |||||||    
T  197154 -accctcaacccta 197166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 22079451 - 22079322
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaa 106  Q
    ||||||||| ||||  |||||||||||| |||||| |||||||||   |||| ||||||||| ||||||||||||||||| || ||||| |||| | |||    
T  22079451 tggaggagaaattgatctctccaatccaatatcaa-tgagttctttacaaagagatacaaaatggttacaagaaattagctttaacaagctcacaaagaa 22079353  T
Q  107 caaaccctaatttctacccttttcccaatctc 138  Q
    |||| | ||||||||||| |||| ||||||||    
T  22079352 caaa-cataatttctaccatttttccaatctc 22079322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 143
Target Start/End: Complemental strand, 41361026 - 41360914
Alignment:
Q  30 aatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctaccc-tt 127  Q
    |||||||||||||  ||||||||||||| | |||||||| ||||||||||||||||| ||  ||||| |||| | ||||||| |||||||||||||| ||    
T  41361026 aatccactatcaac-gagttcttacaaa-gagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaa-cctaatttctacccatt 41360930  T
Q  128 ttcccaatctcaccaa 143  Q
    ||||||||||||||||    
T  41360929 ttcccaatctcaccaa 41360914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 138
Target Start/End: Original strand, 12318589 - 12318685
Alignment:
Q  42 aatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctacccttttcccaatctc 138  Q
    |||||||||||| | |||  |||||||| |||||||||||||||||||  ||||| || ||||||||||| |||||||||||||| ||||| ||||||    
T  12318589 aatgagttcttaaagaagacatacaaaatggttacaagaaattagcttcaacaagctctccatgaacaaa-cctaatttctacccatttccaaatctc 12318685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 13659363 - 13659501
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| |||| |||| ||| |||| |||||||||||||||  ||||| | |    
T  13659363 cctactctgggggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatataaatgggtaacaagaaattagcttcaacaagctta 13659460  T
Q  100 ccatgaacaaaccctaatttcta-cccttttcccaatctcac 140  Q
    | |  ||| |||||||||||||| || |||||||||||||||    
T  13659461 caaaaaac-aaccctaatttctatccgttttcccaatctcac 13659501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 16455750 - 16455676
Alignment:
Q  13 gagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    |||||||||  ||||||||||||||||||| |||||||||||| | | |||||||| ||||||||||||||||||||    
T  16455750 gagagattgatctctccaatccactatcaa-tgagttcttacaca-gagatacaaatgggttacaagaaattagctt 16455676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 928026 - 928123
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    ||||| |||||||||| || |||||| ||||||| | ||| |||||||||||||||||||||||||  ||||| |||| | |||||||||||||||||||    
T  928026 ctctctaatccactattaa-tgagtttttacaaa-gagatccaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccctaatttcta 928123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 30476486 - 30476614
Alignment:
Q  14 agagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttga-caagttcaccatgaacaaacc 112  Q
    ||||||||  || ||||||||| |||||| |||||||||||||| | |||||||| ||||||||| |||||| ||| | ||||||||  | |||||| ||    
T  30476486 agagattgatctgtccaatccagtatcaa-tgagttcttacaaa-gagatacaaatgggttacaataaattatcttcaacaagttcataaagaacaa-cc 30476582  T
Q  113 ctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||  ||||||||||||||||||    
T  30476583 ctaatttctacctattttcccaatctcaccaa 30476614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 143
Target Start/End: Complemental strand, 19752815 - 19752685
Alignment:
Q  13 gagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaac 111  Q
    |||||||||  ||||||||||| ||||||| |||||||||||||| | ||||||||  |||||||||||||||||||  ||||| || | | |||| |||    
T  19752815 gagagattgatctctccaatcctctatcaa-tgagttcttacaaa-gagatacaaatcggttacaagaaattagcttcaacaagctcgcaaagaac-aac 19752719  T
Q  112 cctaatttctaccc--ttttcccaatctcaccaa 143  Q
    ||||||||||||||  ||| | ||||||||||||    
T  19752718 cctaatttctacccattttactcaatctcaccaa 19752685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 46065059 - 46064921
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||  ||||||||||||| |||| |||||| | | ||||||||||||||||||  || || |||    
T  46065059 cctactctgggggagagattgatctctccaatccactat-gaatgagttcttac-aaagagatacacatgagttacaagaaattagcttcaacgagctca 46064962  T
Q  100 ccatgaacaaaccctaatttcta-cccttttcccaatctcac 140  Q
    | | ||||||| |||||||| || || |||||||||||||||    
T  46064961 caaagaacaaa-cctaatttttatccattttcccaatctcac 46064921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 3460778 - 3460710
Alignment:
Q  62 atacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctaccctttt 129  Q
    ||||||||||||||||| ||||||||||  ||||| |||| | |||||||| |||||||||||||||||    
T  3460778 atacaaaagggttacaataaattagcttcaacaagctcacaaagaacaaactctaatttctaccctttt 3460710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 6808581 - 6808507
Alignment:
Q  14 agagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    ||||||||  |||||||||||||||| ||||||||||||   |||| |||||||||| |||||||||| |||||||    
T  6808581 agagattgatctctccaatccactat-aaatgagttctttacaaagagatacaaaagagttacaagaagttagctt 6808507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 37282728 - 37282846
Alignment:
Q  11 aggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaa 109  Q
    ||||||||||   ||||||||||||||| | |||||||||||   |||| ||| |||||||||||| | ||||||||||  ||||| |||| | ||||||    
T  37282728 aggagagatttatctctccaatccacta-ctaatgagttctttacaaagagatgcaaaagggttaccataaattagcttcaacaagctcacaaggaacaa 37282826  T
Q  110 accctaatttctaccctttt 129  Q
    |||||||||| |||| ||||    
T  37282827 accctaatttataccatttt 37282846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 140
Target Start/End: Original strand, 8871135 - 8871213
Alignment:
Q  63 tacaaaagggttacaagaaattagcttga-caagttcaccatgaacaaaccctaatttctacccttttcccaatctcac 140  Q
    ||||||| ||||||||||||||||||| | | |  |||| | ||||||||||||||||||||| |||||| ||||||||    
T  8871135 tacaaaatggttacaagaaattagcttcaacgaactcacaaagaacaaaccctaatttctaccattttccaaatctcac 8871213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 138
Target Start/End: Complemental strand, 13938256 - 13938143
Alignment:
Q  24 ctctccaatccactatcaaatgagtt-cttacaaaagggatacaaaag-ggttacaagaaattagcttg-acaagttcaccatgaacaaaccctaatttc 120  Q
    ||||||||||||||||||| |||||| |||||||| | |||||||||  |||||||||||||||  ||  |||||||| ||| ||||||  |||||||||    
T  13938256 ctctccaatccactatcaa-tgagtttcttacaaa-gagatacaaaaaaggttacaagaaattatattttacaagttctccaagaacaa--cctaatttc 13938161  T
Q  121 tacccttttcccaatctc 138  Q
    ||||| ||||||||||||    
T  13938160 tacccatttcccaatctc 13938143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 13138014 - 13138089
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    ||||||||||  |||| |||||||||||||| || ||||||||||| | ||| |||| ||||||||||||||||||||    
T  13138014 ggagagattgctctcttcaatccactatcaa-tgtgttcttacaaa-gagatgcaaatgggttacaagaaattagctt 13138089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 15820448 - 15820326
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||| ||||||||   |||| |||| ||||||||| |||||||||| ||||| |||||||| | ||||||||||||||||||  ||||| |||    
T  15820448 cctactctggatgagagatttatctcttcaatgcactatcaa-tgagttctta-aaaagagatacaaatgtgttacaagaaattagcttcaacaagctca 15820351  T
Q  100 ccatgaacaaaccctaatttctaccc 125  Q
    | | ||||||| |||||||| |||||    
T  15820350 caaagaacaaa-cctaatttttaccc 15820326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 28242445 - 28242391
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaa 57  Q
    |||| ||||||||||||||||  ||||||||||||||||  ||||||||||||||||    
T  28242445 cctactctggaggagagattgatctctccaatccactat--aatgagttcttacaaa 28242391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 37879006 - 37879079
Alignment:
Q  71 ggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 143  Q
    |||||||||||||||||||  ||||| |||| | |||| ||||||||||||||||  ||||||||||||||||||    
T  37879006 ggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacctattttcccaatctcaccaa 37879079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 6378655 - 6378603
Alignment:
Q  72 gttacaagaaattagcttgacaa-gttcaccatgaacaaaccctaatttctacc 124  Q
    ||||||| |||||||||| |||| ||||| ||||||||||||||||||||||||    
T  6378655 gttacaaaaaattagctt-acaatgttcaacatgaacaaaccctaatttctacc 6378603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 37876798 - 37876865
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggtta 75  Q
    ||||||||||||||||  |||| |||||||||||| |||||||| |||| |||| |||||||| ||||||    
T  37876798 tctggaggagagattgatctctgcaatccactatc-aatgagttattac-aaagagatacaaatgggtta 37876865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 48382505 - 48382441
Alignment:
Q  56 aaagggatacaaaagggttacaagaaattagcttgacaagttcaccatgaacaaaccctaatttct 121  Q
    |||| ||||||||  ||||||||||||||| ||| |||||||||| | || |||||||||||||||    
T  48382505 aaagtgatacaaataggttacaagaaattaactt-acaagttcacaaagatcaaaccctaatttct 48382441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 32737015 - 32736952
Alignment:
Q  61 gatacaaaagggttacaagaaattagcttgacaagttcaccatgaacaaaccctaatttctaccc 125  Q
    ||||||||  |||||||| |||||||||| | |||||||  | ||||||||||||||||||||||    
T  32737015 gatacaaagaggttacaaaaaattagcttaa-aagttcataaagaacaaaccctaatttctaccc 32736952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 35109556 - 35109493
Alignment:
Q  61 gatacaaaagggttacaagaaattagcttgacaagttcaccatgaacaaaccctaatttctaccc 125  Q
    ||||||||  ||||||||||||||||||| | ||| |||| | ||||||||| ||||||||||||    
T  35109556 gatacaaataggttacaagaaattagctt-aaaagctcacaaagaacaaaccttaatttctaccc 35109493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 2631 - 2868
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  2631 cctactctggaggagagattgtactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttacaagaaattagcttgacaagttca 2729  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  2730 ctatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagat 2827  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  2828 actctaatcaaagaaccctaaaccctagagcttcccctttg 2868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 12647413 - 12647650
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  12647413 cctactctggaggagagattgtactctccaatccactatcaaatgagttctttacaaaagggatacaagagg-ttacaagaaattagcttgacaagttca 12647511  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  12647512 ctatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagat 12647609  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12647610 actctaatcaaagaaccctaaaccctagagcttcccctttg 12647650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 6266832 - 6266605
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || ||||||||||    
T  6266832 cctactctggaggagagattgtactctccaatccactatcaaa-gagttcttacaaaagggatacaaaagg-ttacaagaaattagatttgacaagttca 6266735  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  6266734 caatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagat 6266635  T
Q  200 actctaatcaaagaaccctaaaccctagag 229  Q
    ||||||||||||||||||||||||||||||    
T  6266634 actctaatcaaagaaccctaaaccctagag 6266605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 13656059 - 13656220
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttgacaagttcac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  13656059 cctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaagagg-ttacaagaaattagcttgacaagttcac 13656157  T
Q  101 catgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctct 163  Q
     |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13656158 tatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctct 13656220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 32289705 - 32289479
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattag-cttgacaagttca 99  Q
    |||| ||||||||||||||||  ||||| |||  |||||||| |||||||||||||||| |||||||||| |||||||||||||||  ||||||||||||    
T  32289705 cctactctggaggagagattgatctctctaatttactatcaa-tgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttca 32289607  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagaga 198  Q
    | | |||| ||||||||||||||||||||| ||||||||||||||||||||||||||| || ||   |||||||||| |||||||| | |||||||||||    
T  32289606 caaagaac-aaccctaatttctaccctttt-ccaatctcaccaagacactcaatgattttcactcaccaaggtgtttaccatgtttccaaacccaagaga 32289509  T
Q  199 tactctaatcaaagaaccctaaaccctagag 229  Q
      |||||||||||| || |||||||||||||    
T  32289508 agctctaatcaaag-actctaaaccctagag 32289479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 4484357 - 4484592
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  4484357 cctactctggaggagagattgaactctccaatccactatcaa-tgagttcttacaaaagagatacaaaagggttacaagaaattagctttgacaagttca 4484455  T
Q  100 ccatgaacaaaccctaatttctacccttt--tcccaatctcac------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaac 190  Q
    | | |||| ||||||||||||||||||||  ||||||| ||||      |||||||||||||||||  | ||   |||||||||| | ||||||  ||||    
T  4484456 caaagaac-aaccctaatttctacccttttctcccaatttcaccaagaacaagacactcaatgatttacactcaccaaggtgtttacaatgtttcccaac 4484554  T
Q  191 ccaagagatactctaatcaaagaaccctaaaccctagag 229  Q
    ||||||||  |||||||||||| ||||||||||||||||    
T  4484555 ccaagagaagctctaatcaaag-accctaaaccctagag 4484592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 30833487 - 30833342
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  30833487 cctactctggaggagagattgaactctccaatccactatcaa-tgagttcttacaaaagagatacaaaagggttacaagaaattaactttgacaagttca 30833389  T
Q  100 ccatgaacaaaccctaatttctacccttt--tcccaatctcaccaaga 145  Q
    | | |||| ||||||||||||||||||||  |||||||||||||||||    
T  30833388 caaagaac-aaccctaatttctacccttttctcccaatctcaccaaga 30833342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 45099895 - 45099665
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||   |||| |||||||||| |||||||||||||||| ||||||||||||    
T  45099895 cctactctggaggagagattgaactctccaatccactatc-aatgagttctt--caaagagatacaaaagagttacaagaaattagctttgacaagttca 45099799  T
Q  100 ccatgaacaaaccctaatttctaccc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaa 189  Q
    | | |||| |||||||||||||||||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  |||    
T  45099798 caaagaac-aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaa 45099700  T
Q  190 cccaagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  45099699 cccaagaga-actctaatcaaag-accctaaacccta 45099665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 5723283 - 5723512
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||| ||||||||||||  ||||||||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||||||| ||||||||||    
T  5723283 cctactctagaggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaaaggttacaagaaattagctttgacaagttca 5723380  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacc 191  Q
    | | |||||| || ||||||||||||||||| |||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  |||||    
T  5723381 caaagaacaagcc-taatttctacccttttctcaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacc 5723479  T
Q  192 caagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||| ||||||||||||| |||| ||||||||    
T  5723480 caagaga-actctaatcaaag-accccaaacccta 5723512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 4503160 - 4503390
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||   |||| |||||||||| |||||||||||||||| ||||||||||||    
T  4503160 cctactctggaggagagattgaactctccaatccactatc-aatgagttctt--caaagagatacaaaagagttacaagaaattagctttgacaagttca 4503256  T
Q  100 ccatgaacaaaccctaatttctacc--cttttcccaatctc-------accaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaa 189  Q
    | | |||| ||||||||||||||||   |||||||||||||       | ||||||||||||||||| || ||   |||||||||| | ||||||  |||    
T  4503257 caaagaac-aaccctaatttctaccattttttcccaatctctccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaa 4503355  T
Q  190 cccaagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  4503356 cccaagaga-actctaatcaaagaa-cctaaacccta 4503390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 36205692 - 36205921
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| ||||||||| |||||| |||||||||||| || |||| |||||||||   |||| |||||||||| |||||||||||||||| ||||||||||||    
T  36205692 cctactctggaggatagattgaactctccaatccgctgtcaa-tgagttcttc--aaagagatacaaaagagttacaagaaattagctttgacaagttca 36205788  T
Q  100 ccatgaacaaaccctaatttctacc-cttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaac 190  Q
    | | |||| ||||||||||||||||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| ||||||||  ||||    
T  36205789 caaagaac-aaccctaatttctaccatttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttaccatgtttcccaac 36205887  T
Q  191 ccaagagatactctaatcaaagaaccctaaacccta 226  Q
    |||||||| ||||||||||||| |||||||||||||    
T  36205888 ccaagaga-actctaatcaaag-accctaaacccta 36205921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 29867999 - 29867869
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttcaccatgaacaaa 110  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||| | |||||||| |||||||||||||||||| ||||||||||||| | |||| ||    
T  29867999 ggagagattgatctctccaatccactatcaaa-gagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aa 29867903  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| ||||||||||||||||||    
T  29867902 ccctaatttctacccattttcccaatctcaccaa 29867869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 2334445 - 2334661
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||||| ||||| ||||||||||||  |||||||||    
T  2334445 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaaagagttactagaaattagcttcaacaagttca 2334542  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaac 190  Q
    | | |||| |||||| |||||||||| |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  ||||    
T  2334543 caaagaac-aacccttatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaac 2334641  T
Q  191 ccaagagatactctaatcaaa 211  Q
    |||||||| ||||||||||||    
T  2334642 ccaagaga-actctaatcaaa 2334661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 34139797 - 34139936
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||  ||||| |||    
T  34139797 cctaatctgggggagagattgatctctccaatccactatcaa-tgagttcttacaaaagggatacatatgggttacaagaaattagcttaaacaagctca 34139895  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcac 140  Q
    | | |||| ||||||||||||||||| ||||| |||||||||    
T  34139896 caaagaac-aaccctaatttctacccattttctcaatctcac 34139936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 42362493 - 42362262
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| |||||||| |  ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||  ||||| |||    
T  42362493 cctaatctgggggagagatagatctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctca 42362396  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctctct-ttacaaggtgtttcccatgttt-tcaa 189  Q
    | | ||||||| |||||||||||||| |||||||||||||||       ||||||||||||||||| || ||    |||||||||| | ||||||  |||    
T  42362395 caaagaacaaa-cctaatttctacccattttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaa 42362297  T
Q  190 cccaagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||||| ||||||||||||| ||||| |||||||    
T  42362296 cccaagaga-actctaatcaaag-accctcaacccta 42362262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 14633852 - 14633991
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||    
T  14633852 cctaatctgggggagagattgatctctccaatccactatcta-tgagttcttacaaaagggatacaaatgggttacaagaaattagcttaaacaagctca 14633950  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcac 140  Q
    | | |||| || |||||||||||||| |||| ||||||||||    
T  14633951 caaagaac-aatcctaatttctacccattttaccaatctcac 14633991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 36988103 - 36988333
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattag-cttgacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||  |||||||| |||    
T  36988103 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaaagagttacaagaaattagttttgacaagctca 36988200  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaac 190  Q
    |   |||| ||||||||||||||||| |||| |||||| |||       ||||||||||||||||| || ||   |||||||||| | ||||||  ||||    
T  36988201 catagaac-aaccctaatttctacccttttttccaatcccaccaatgaacaagacactcaatgattttcactcaccaaggtgtttactatgtttcccaac 36988299  T
Q  191 ccaagagatactctaatcaaagaaccctaaacccta 226  Q
    |||||||| ||||||||||||| ||||| |||||||    
T  36988300 ccaagaga-actctaatcaaag-accctcaacccta 36988333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 45727070 - 45726929
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| ||||||||  |||||||||||||||||||  ||||| |||    
T  45727070 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaataggttacaagaaattagcttcaacaagctca 45726973  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||| ||||||||||||| ||||||||||||||||||    
T  45726972 caaagaac-aactctaatttctacccattttcccaatctcaccaa 45726929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 143
Target Start/End: Complemental strand, 38312376 - 38312240
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatg 104  Q
    ||||| ||||||||||  ||||||||||||||||| |||||| |||||| |||| |||||||| ||||||||||||||||| ||  |||||||||| | |    
T  38312376 tctgggggagagattgatctctccaatccactatc-aatgagatcttac-aaagagatacaaatgggttacaagaaattagtttcaacaagttcacaaag 38312279  T
Q  105 aacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||| ||||||||||||||||| ||||||||||||||||||    
T  38312278 aac-aaccctaatttctacccattttcccaatctcaccaa 38312240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 6595033 - 6595175
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| || |||||||||| |||| ||| |||||||||||||||||||||||||  |||||||||    
T  6595033 cctactctggaggagagattgatctctccaatccactatc-aacgagttcttac-aaagagattcaaaagggttacaagaaattagcttcaacaagttca 6595130  T
Q  100 ccatgaacaaaccctaatttctacc--cttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||   |||||| |||||||||||    
T  6595131 caaagaac-aaccctaatttctaccattttttcctaatctcaccaa 6595175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 723771 - 723893
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||  ||||| |||    
T  723771 cctaatctgggggagagattgatctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctca 723868  T
Q  100 ccatgaacaaaccctaatttctaccc 125  Q
    | | ||||||| ||||||||||||||    
T  723869 caaagaacaaa-cctaatttctaccc 723893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 33648313 - 33648176
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||| ||||| |||||||||||   ||||  |||||||||||||||| |||||||||||  ||||| |||    
T  33648313 cctactctggaggagagattgatctctccaatccgctatc-aatgagttctttacaaagaaatacaaaagggttacaggaaattagcttcaacaagctca 33648215  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctc 138  Q
    | | |||||||||||||||| |||| ||||| |||||||    
T  33648214 caaagaacaaaccctaatttttaccattttctcaatctc 33648176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 1631759 - 1631900
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||||||   |||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||| ||||||||  ||||| |||    
T  1631759 cctactctggaggagagattgatttctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagatattagcttcaacaagctca 1631856  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| || |||||||||||||| |||| |||||||||||||    
T  1631857 caaagaac-aatcctaatttctacccatttttccaatctcaccaa 1631900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 35446911 - 35447052
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||||||||||| ||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||| ||  ||||| |||    
T  35446911 cctactctggaggagagagtgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaagaaattagattcaacaagatca 35447008  T
Q  100 ccatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||  |||| |||||||||||||    
T  35447009 caaagaac-aaccctaatttctaccaattttaccaatctcaccaa 35447052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 24398188 - 24398055
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  |||||||||||| |||||| |||||||||   |||| |||||||||||||||||||||||||||||  ||||| |||| | |||||||    
T  24398188 ggagagattgatctctccaatccattatcaa-tgagttctttacaaagagatacaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaa 24398090  T
Q  111 ccctaatttctaccctt--ttcccaatctcaccaa 143  Q
    || ||| ||||||||||  ||| ||||||||||||    
T  24398089 ccttaacttctaccctttcttcacaatctcaccaa 24398055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 143
Target Start/End: Complemental strand, 36773698 - 36773562
Alignment:
Q  6 tctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatg 104  Q
    ||||| ||||||||||  |||||||||||||||||||| |||||||||| |||| |||||||| | ||||||||||||||||||  ||||| |||| | |    
T  36773698 tctgggggagagattgatctctccaatccactatcaaa-gagttcttac-aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaag 36773601  T
Q  105 aacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||| ||||||||||| | ||| ||||||||||||||||||    
T  36773600 aac-aaccctaatttattcccattttcccaatctcaccaa 36773562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 11690619 - 11690504
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    |||||||||||||||||||  || |||||||||| |||||||||| ||||||||||||||||||||  ||||| |||| | ||||||| |||||||||||    
T  11690619 ctctccaatccactatcaac-gatttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttcta 11690523  T
Q  123 ccc-ttttcccaatctcac 140  Q
    ||| |||||||||||||||    
T  11690522 cccattttcccaatctcac 11690504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 36318047 - 36318177
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||| ||||||| ||  ||||| |||| | |||| ||    
T  36318047 ggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgggttacaataaattagtttcaacaagctcacaaagaac-aa 36318143  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| |||| |||||||||||||    
T  36318144 ccctaatttctacccatttttccaatctcaccaa 36318177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 7815323 - 7815441
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    |||||||||||||||| ||||||||||||||||| | |||||||||| ||||||||||||||||||  ||||| |    | ||||||||||||||||| |    
T  7815323 ctctccaatccactat-aaatgagttcttacaaa-gagatacaaaagagttacaagaaattagcttcaacaagcttctaaagaacaaaccctaatttcaa 7815420  T
Q  123 cccttttcccaatctcaccaa 143  Q
    || ||||| ||||||||||||    
T  7815421 cctttttctcaatctcaccaa 7815441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 11151618 - 11151759
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| |||||| |||  ||||||||||||||||| || ||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||    
T  11151618 cctaatctgggggagaggttgatctctccaatccactatctaa-gagttcttacaaa-gtgatacaaatgggttacaagaaattagcttaaacaagctca 11151715  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||||||  ||||||||||||| |||||||||| |||||||    
T  11151716 caaagaacaaa-tctaatttctacccattttcccaatttcaccaa 11151759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 26353302 - 26353184
Alignment:
Q  24 ctctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttcta 122  Q
    ||||||||||||||||||| ||||| ||||||||| | ||||||||| ||||||||||||||||||  ||||  |||| | ||||||||| |||||||||    
T  26353302 ctctccaatccactatcaa-tgagtacttacaaaaag-atacaaaagtgttacaagaaattagcttcaacaaactcacaaagaacaaaccttaatttcta 26353205  T
Q  123 cccttttcccaatctcaccaa 143  Q
    | |||||  ||||||||||||    
T  26353204 cacttttttcaatctcaccaa 26353184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 13121901 - 13121769
Alignment:
Q  8 tggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagcttga-caagttcaccatgaa 106  Q
    ||||||||||||||   ||| |||||||||||||| ||||||  |||||| | ||||||||  ||||||||||||||| ||| | |||| |||| | |||    
T  13121901 tggaggagagattgatttcttcaatccactatcaa-tgagtttctacaaa-gagatacaaa--ggttacaagaaattatcttcaacaagctcacaaagaa 13121806  T
Q  107 caaaccctaatttctacccttttcccaatctcaccaa 143  Q
    |||||||||||||||||| |||||||| |||||||||    
T  13121805 caaaccctaatttctaccattttcccagtctcaccaa 13121769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 33162488 - 33162618
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||| ||||||||||||| |||||||||||| | | |||||||| ||||||||||||||||||||  ||||| |||| | |||| ||    
T  33162488 ggagagattgatctctctaatccactatcaa-tgagttcttacaga-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aa 33162584  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    ||||||||||||||| |||||| ||| |||||||    
T  33162585 ccctaatttctacccattttcctaatttcaccaa 33162618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 11067446 - 11067305
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| ||||| ||||||||||  |||| ||||||| ||| ||||||||||||||||| | |||||||| |||||||||||||||||| |||||||| |||    
T  11067446 cctaatctgggggagagattgatctcttcaatccattat-aaatgagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagctca 11067349  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | | || ||| ||||||||||||| |||| ||||| |||||||    
T  11067348 caaagtac-aacactaatttctacccatttttccaatttcaccaa 11067305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 17057396 - 17057537
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| | ||||||| ||||||||||  ||||| |      
T  17057396 cctagtctgggggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgagttacaaaaaattagcttcaacaagcttg 17057493  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| |||| |||||||||||||    
T  17057494 caaagaac-aaccctaatttctacccatttttccaatctcaccaa 17057537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 17085379 - 17085520
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||| | ||||||| ||||||||||  ||||| |      
T  17085379 cctagtctgggggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaatgagttacaaaaaattagcttcaacaagcttg 17085476  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||| |||| |||||||||||||    
T  17085477 caaagaac-aaccctaatttctacccatttttccaatctcaccaa 17085520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 42288148 - 42288278
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  |||||||||||| |||| |||||| |||||| ||||  ||||||| ||||||||| ||||||||||  ||||| |||| | |||| ||    
T  42288148 ggagagattgatctctccaatccattatc-aatgagctcttac-aaagaaatacaaatgggttacaataaattagcttcaacaagctcacaaagaac-aa 42288244  T
Q  111 ccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    || |||||||||||| ||||||||||||||||||    
T  42288245 ccttaatttctacccattttcccaatctcaccaa 42288278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 11049695 - 11049550
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatac-aaaagggttacaagaaattagctt-gacaagttc 98  Q
    |||||| || |||||||||||  || | ||||| |||||||| |||||||||||||| | ||||| |||||||||| |||||||||||||  ||||| ||    
T  11049695 cctattatgaaggagagattgatcttttcaatctactatcaa-tgagttcttacaaa-gagatactaaaagggttataagaaattagcttcaacaagctc 11049598  T
Q  99 acca---tgaacaaaccctaatttctacccttttcccaatctcaccaa 143  Q
    || |    |||||||||||||||| |||| |||||| |||||||||||    
T  11049597 acaaattagaacaaaccctaatttataccattttcctaatctcaccaa 11049550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 17490186 - 17490261
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    ||||||||||  |||| |||||||||||||| |||||||||||||| | | |||||||| ||||||||||||||||||    
T  17490186 ggagagattgatctctacaatccactatcaa-tgagttcttacaaa-gagttacaaaagagttacaagaaattagctt 17490261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 28672072 - 28671989
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaatta 85  Q
    |||| ||||||||||||||||  |||||||||||||| || | |||||||||   |||| ||||||||| ||| |||||||||||    
T  28672072 cctactctggaggagagattgatctctccaatccactgtc-agtgagttctttgtaaagagatacaaaacggtaacaagaaatta 28671989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 7451250 - 7451173
Alignment:
Q  10 gaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt 89  Q
    ||||||||||||  |||| |||||||||||| |||||||| |||| |||| |||||||| |  |||||||||||||||||    
T  7451250 gaggagagattgatctctgcaatccactatc-aatgagttattac-aaagagatacaaatgaattacaagaaattagctt 7451173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 24885762 - 24885669
Alignment:
Q  42 aatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctac-ccttttcccaat 135  Q
    |||||||||||||| | ||| |||||| ||||||||||||||||||||  ||||| |||| | ||||||| |||||||||||| | ||||||||||    
T  24885762 aatgagttcttacagagggg-tacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctactcattttcccaat 24885669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 24197974 - 24197906
Alignment:
Q  68 aagggttacaagaaattagcttg--acaagttcaccatgaacaaaccctaatttctacccttttcccaa 134  Q
    |||||||||||||||||||| |   |||||||| ||| ||| ||||  |||||||||||||||||||||    
T  24197974 aagggttacaagaaattagccttcaacaagttctccaagaaaaaactttaatttctacccttttcccaa 24197906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 31417230 - 31417170
Alignment:
Q  61 gatacaaaagggttacaagaaattagcttgacaagttcaccatgaacaaaccctaatttct 121  Q
    ||||||||| ||||||||||||||||| ||  | ||||| || |||||||| |||||||||    
T  31417230 gatacaaaaaggttacaagaaattagcgtgcaacgttcaacaagaacaaactctaatttct 31417170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 3753 - 3990
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||| ||| ||||||||||||||||||||| |||||    
T  3753 cctactctggaggagagattgaactctccaatccactatcaaatgagttctttacaaaaggaatacaagagg-ttacaagaaattagcttgacatgttca 3851  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  3852 ctatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagat 3949  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3950 actctaatcaaagaaccctaaaccctagagcttcccctttg 3990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 6414 - 6177
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttctt-acaaaagggatacaaaagggttacaagaaattagcttgacaagttca 99  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||  || |||||||||||||||||||||||||||    
T  6414 cctactctggaggagagtttgtactctccaatccactatcaaatgagttctttacaaaagggatacaag-ggcttacaagaaattagcttgacaagttca 6316  T
Q  100 ccatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagat 199  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  6315 ctatgaacaaaccctaatttctacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagat 6218  T
Q  200 actctaatcaaagaaccctaaaccctagagcttcccctttg 240  Q
    |||||||||||||||||||||||||||||| | ||||||||    
T  6217 actctaatcaaagaaccctaaaccctagagttgcccctttg 6177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 434674 - 434443
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||    
T  434674 cctactctggaggagagattgaactctccaatccactatc-aatgagttcttac-aaagagatacaaaagggttacaagaaattagctttgacaagttca 434577  T
Q  100 ccatgaacaaaccctaatttctaccctttt--cccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgtttt-caa 189  Q
    | | |||| |||||||||||||||||||||  |||||||||||       ||||||||||||||||| || ||   |||||| ||| ||||||||| |||    
T  434576 caaagaac-aaccctaatttctaccctttttccccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtatttaccatgttttccaa 434478  T
Q  190 cccaagagatactctaatcaaagaaccctaaacccta 226  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  434477 cccaagaga-actctaatcaaag-accctaaacccta 434443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 11188 - 11423
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattag-cttgacaagttca 99  Q
    |||| |||||||||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||  || |||||||||    
T  11188 cctactctggaggagagattgaactctccaatccactatcaac-gagttcttacaaaagagatacaaaagggttacaagaaattagattttacaagttca 11286  T
Q  100 ccatgaacaaaccctaatttctacccttt--tcccaatctcac------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaac 190  Q
    | | |||| ||||||||||||||||||||  ||||||||||||      |||||||||||||||||  | ||   |||||||||| | ||||||  ||||    
T  11287 caaagaac-aaccctaatttctacccttttctcccaatctcaccaagaacaagacactcaatgatttacactcaccaaggtgtttacaatgtttcccaac 11385  T
Q  191 ccaagagatactctaatcaaagaaccctaaaccctagag 229  Q
    ||||||||  |||||||||||| ||| ||||||||||||    
T  11386 ccaagagaagctctaatcaaag-accataaaccctagag 11423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 8762 - 8907
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattag-cttgacaagttca 99  Q
    |||| |||||||||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||  || | |||||||    
T  8762 cctactctggaggagagattgaactctccaatccactatcaac-gagttcttacaaaagagatacaaaagggttacaagaaattagattttataagttca 8860  T
Q  100 ccatgaacaaaccctaatttctacccttt--tcccaatctcaccaaga 145  Q
    | | |||| ||||||||||||||||||||  |||||||||||||||||    
T  8861 caaagaac-aaccctaatttctacccttttctcccaatctcaccaaga 8907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 1056 - 827
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||| ||   |||| ||||||||||||||||||||||||||| ||||||||||||    
T  1056 cctactctggaggagagattgaactctccaatccactatc-aatgagttgtt--caaagagatacaaaagggttacaagaaattagctttgacaagttca 960  T
Q  100 ccatgaacaaaccctaatttctaccc--ttttcccaatctcac------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaac 190  Q
    | | |||| |||||||||||||||||  |||||||||||||||      ||||||||||||||||| || ||   |||||||||| | ||||||  ||||    
T  959 caaagaac-aaccctaatttctacccttttttcccaatctcaccaagaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaac 861  T
Q  191 ccaagagatactctaatcaaagaaccctaaacccta 226  Q
    |||||||| ||||||||||||| |||||||||||||    
T  860 ccaagaga-actctaatcaaag-accctaaacccta 827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 11698 - 11557
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||||||| |||| |||||||| | |||||||||||||||| ||||||||||||    
T  11698 cctactctggaggagagattgaactctccaatccactatc-aatgagttcttac-aaagagatacaaatgagttacaagaaattagctttgacaagttca 11601  T
Q  100 ccatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 143  Q
    | | |||| ||||||||||||||||  ||||||||||||||||||    
T  11600 caaagaac-aaccctaatttctaccatttttcccaatctcaccaa 11557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 114743 - 114602
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc-ttgacaagttca 99  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||| ||||||||||||    
T  114743 cctactctggaggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatacaaaagcgttacaagaaattagctttgacaagttca 114646  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| |||| |||||||||||| ||||||||||||||||||    
T  114645 caaagaac-aaccttaatttctaccctttttcccaatctcaccaa 114602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 7468 - 7327
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||| ||||||||||||  || |||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||    
T  7468 cctactctagaggagagattgatctttccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctca 7371  T
Q  100 ccatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 143  Q
    | | |||| |||| |||||||||||| |||| |||||||||||||    
T  7370 caaagaac-aaccttaatttctacccatttttccaatctcaccaa 7327  T

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Target: scaffold0066 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 20442 - 20583
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  |||||||||||| ||||||| ||||||||||||| | |||||||| ||||||||||||||||||||  |||||||||    
T  20442 cctaatctgggggagagattgatctctccaatccaatatcaaa-gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttca 20539  T
Q  100 ccatgaacaaaccctaatttctac-ccttttcccaatctcaccaa 143  Q
    | |  |||||| |||||||||| | | ||||||||||||||||||    
T  20540 caaaaaacaaa-cctaatttctgctcattttcccaatctcaccaa 20583  T

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Target: scaffold0176 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 18037 - 18171
Alignment:
Q  7 ctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatga 105  Q
    |||||||||||||||  ||||||||||||||||| |||||||| |||| |||| |||||||| | ||||||||||||||||||  ||||| |||| ||||    
T  18037 ctggaggagagattgatctctccaatccactatc-aatgagtt-ttac-aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaatga 18133  T
Q  106 acaaaccctaatttctacc-cttttcccaatctcaccaa 143  Q
    || ||||||||||||||||  |||||||| |||||||||    
T  18134 ac-aaccctaatttctaccaattttcccactctcaccaa 18171  T

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Target: scaffold0006 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 149124 - 149262
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttca 99  Q
    |||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| |||| |||| ||| |||| |||||||||||||||  ||||| | |    
T  149124 cctactctgggggagagattgatctctccaatccactatc-aatgagttcttac-aaagagatataaatgggtaacaagaaattagcttcaacaagctta 149221  T
Q  100 ccatgaacaaaccctaatttcta-cccttttcccaatctcac 140  Q
    | |  ||| |||||||||||||| || |||||||||||||||    
T  149222 caaaaaac-aaccctaatttctatccgttttcccaatctcac 149262  T

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Target: scaffold0236 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 10630 - 10546
Alignment:
Q  1 cctattctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagc 87  Q
    |||| ||||||||||||||||  |||| |||||||||||| || |||||||||| |||| ||||||||| |||||||| ||||||||    
T  10630 cctactctggaggagagattgatctcttcaatccactatc-aacgagttcttac-aaagagatacaaaatggttacaataaattagc 10546  T

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Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 139
Target Start/End: Original strand, 80351 - 80447
Alignment:
Q  43 atgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaaccctaatttctaccc-ttttcccaatctca 139  Q
    |||||||||||||||| | ||||||| ||||| ||||||||||||||  ||||| |||| | |||| ||||||||||||||||| ||||||||||||||    
T  80351 atgagttcttacaaaaag-atacaaatgggttgcaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctca 80447  T

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Target: scaffold0219 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 138
Target Start/End: Original strand, 27480 - 27606
Alignment:
Q  12 ggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaagggttacaagaaattagctt-gacaagttcaccatgaacaaa 110  Q
    ||||||||||  ||||||||||||||||| ||| |||| ||   |||| |||||||| | ||||||||||||||||||  ||||| ||  || ||||||     
T  27480 ggagagattgatctctccaatccactatc-aataagttatttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcttcaagaacaat 27578  T
Q  111 ccctaatttctacccttttcccaatctc 138  Q
     | |||||||||| |||||| |||||||    
T  27579 acataatttctactcttttcacaatctc 27606  T

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