View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2062_high_22 (Length: 226)
Name: NF2062_high_22
Description: NF2062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2062_high_22 |
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Alignment Details
Target: chr2 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 4 - 219
Target Start/End: Complemental strand, 2426203 - 2425989
Alignment:
| Q |
4 |
cacataagggtgtacaaacaaaaaggttgtcaatgaaacattttcccatccttcaaaaaatgaaacattttcccaaagtaaatcaccggacttttgagca |
103 |
Q |
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| T |
2426203 |
cacataagggtgtacaaacaaaa-ggttgtcaatgaaacattttcccatccttcaaaaaatgaaacattttcccaaagtaaatcaccggacttttgagca |
2426105 |
T |
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| Q |
104 |
aaccagagcatagagtaactttcaaagttcaatatattcactcnnnnnnntcaatcttcgacttctaccataattccaataccctttatggcaattggac |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2426104 |
aaccagagcatagagtaactttcaaagttcaatatattcactcaaaaaaatcaatcttcgacttctaccataattccaataccctttatggcaattggac |
2426005 |
T |
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| Q |
204 |
tctgacacctttgctt |
219 |
Q |
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|||||||||| ||||| |
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| T |
2426004 |
tctgacacctctgctt |
2425989 |
T |
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