View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2062_high_7 (Length: 436)
Name: NF2062_high_7
Description: NF2062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2062_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 390; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 11 - 412
Target Start/End: Complemental strand, 26735273 - 26734872
Alignment:
| Q |
11 |
cagagacactttaactcattcatcatcaacctttatttcaatcatggccacgtcatcatccatctctagattctcctccaccctcctccgcaacaaccac |
110 |
Q |
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| T |
26735273 |
cagagacactttaactcattcatcatcaacctttatttcaatcatggccacgtcatcatccatctctagattctcctccaccctcctccgcaacaaccac |
26735174 |
T |
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| Q |
111 |
accgtacaactcagaagttccactaacctgcaattaatcttcccgaagcacttggaattgaaccacaagctgatcacgtgccgtgccactcgctccagtg |
210 |
Q |
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| T |
26735173 |
accgtacaactcagaagttccactaacctgcaactaatcttcccgaagcacttggaattgaaccacaagctgatcacgtgccgtgccactcgctccagtg |
26735074 |
T |
|
| Q |
211 |
ccgttgcacgtgccacgattagcgaagtggtggttgttagcagtggagtggctgagaagggaaaagaggaaggaagagcactgagagttggtttgatttg |
310 |
Q |
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| T |
26735073 |
ccgttgcacgtgccacgattagcgaggtggtggttgttagcagtggagtggctgagaagggaaaagaggaaggaagagcactgagagttggtttgatttg |
26734974 |
T |
|
| Q |
311 |
tggcggtccttctgctgaacgtgggatttcgcttaattctgctcgatcagttcttgatcacttgcaggtacatgcaatttctttgtcatgatcatgaatt |
410 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26734973 |
tggcggcccttctgctgaacgtgggatttcgcttaattctgctcgatcagttcttgatcacttgcaggtacatgcaatttctttgtcatgatcatgaatt |
26734874 |
T |
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| Q |
411 |
ag |
412 |
Q |
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|| |
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| T |
26734873 |
ag |
26734872 |
T |
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