View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2062_low_13 (Length: 345)

Name: NF2062_low_13
Description: NF2062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2062_low_13
NF2062_low_13
[»] chr1 (42 HSPs)
chr1 (17-141)||(31532165-31532289)
chr1 (282-345)||(31532428-31532491)
chr1 (295-345)||(9043625-9043675)
chr1 (296-345)||(5330476-5330525)
chr1 (282-345)||(28411085-28411149)
chr1 (282-345)||(5330592-5330655)
chr1 (282-345)||(51904035-51904098)
chr1 (295-345)||(6540869-6540919)
chr1 (295-344)||(13154636-13154686)
chr1 (295-345)||(46561441-46561491)
chr1 (282-345)||(16698925-16698990)
chr1 (282-345)||(4646813-4646877)
chr1 (282-341)||(5348307-5348366)
chr1 (295-345)||(7112673-7112724)
chr1 (295-345)||(16699055-16699106)
chr1 (295-345)||(21853950-21854000)
chr1 (296-341)||(46136146-46136191)
chr1 (104-144)||(4647897-4647937)
chr1 (112-144)||(5348164-5348196)
chr1 (104-144)||(24987601-24987641)
chr1 (282-345)||(27794413-27794477)
chr1 (302-345)||(27794551-27794595)
chr1 (282-345)||(28724467-28724531)
chr1 (100-144)||(32131927-32131971)
chr1 (295-342)||(21853476-21853523)
chr1 (112-142)||(16698870-16698900)
chr1 (284-345)||(29018536-29018598)
chr1 (295-341)||(47021897-47021943)
chr1 (295-340)||(47022019-47022065)
chr1 (296-345)||(7112550-7112599)
chr1 (112-144)||(2472608-2472640)
chr1 (295-343)||(4646944-4646992)
chr1 (109-141)||(7112748-7112780)
chr1 (112-144)||(9439426-9439458)
chr1 (112-144)||(10028001-10028033)
chr1 (310-345)||(15790438-15790474)
chr1 (112-144)||(18458826-18458858)
chr1 (112-144)||(25235775-25235807)
chr1 (112-144)||(26095815-26095847)
chr1 (112-144)||(26097051-26097083)
chr1 (112-144)||(47022093-47022125)
chr1 (297-345)||(50596114-50596162)
[»] chr2 (48 HSPs)
chr2 (284-345)||(28484532-28484593)
chr2 (282-345)||(17328263-17328327)
chr2 (282-341)||(39227965-39228024)
chr2 (295-345)||(9011812-9011862)
chr2 (295-345)||(23260375-23260425)
chr2 (295-345)||(29098074-29098124)
chr2 (282-339)||(37147723-37147780)
chr2 (282-343)||(38386100-38386160)
chr2 (282-345)||(29098187-29098251)
chr2 (282-345)||(3364499-3364562)
chr2 (282-345)||(28149490-28149553)
chr2 (295-345)||(1498942-1498992)
chr2 (295-345)||(30371441-30371491)
chr2 (296-345)||(1499065-1499114)
chr2 (282-339)||(28484421-28484478)
chr2 (297-345)||(38210920-38210968)
chr2 (295-338)||(16577178-16577221)
chr2 (282-345)||(17328148-17328211)
chr2 (298-341)||(28110313-28110355)
chr2 (296-341)||(37243480-37243525)
chr2 (99-144)||(41089143-41089188)
chr2 (282-345)||(22535621-22535685)
chr2 (112-144)||(33641133-33641165)
chr2 (282-345)||(37147606-37147670)
chr2 (295-341)||(85499-85546)
chr2 (282-341)||(3364387-3364445)
chr2 (302-341)||(9011942-9011981)
chr2 (109-144)||(25926886-25926921)
chr2 (295-345)||(28149617-28149668)
chr2 (105-144)||(38385929-38385968)
chr2 (282-345)||(38385989-38386051)
chr2 (302-345)||(38625095-38625137)
chr2 (104-141)||(2809615-2809652)
chr2 (110-143)||(16670498-16670531)
chr2 (112-145)||(38210865-38210898)
chr2 (295-338)||(85622-85666)
chr2 (112-144)||(16577371-16577403)
chr2 (112-144)||(17328093-17328125)
chr2 (112-144)||(19493472-19493504)
chr2 (112-144)||(19641447-19641479)
chr2 (112-144)||(19840040-19840072)
chr2 (112-144)||(22116156-22116188)
chr2 (112-144)||(29835103-29835135)
chr2 (112-140)||(29835324-29835352)
chr2 (109-141)||(34428635-34428667)
chr2 (112-144)||(34635707-34635739)
chr2 (112-144)||(37147552-37147584)
chr2 (107-143)||(38937533-38937569)
[»] chr4 (48 HSPs)
chr4 (282-345)||(17289914-17289977)
chr4 (295-345)||(9001500-9001550)
chr4 (295-345)||(16493672-16493722)
chr4 (295-345)||(17289799-17289849)
chr4 (295-345)||(39868524-39868574)
chr4 (295-345)||(44561507-44561557)
chr4 (282-345)||(45900723-45900786)
chr4 (295-345)||(21780306-21780356)
chr4 (295-341)||(22272990-22273036)
chr4 (295-345)||(47321042-47321091)
chr4 (295-339)||(17313011-17313055)
chr4 (295-343)||(21798391-21798439)
chr4 (297-345)||(39868650-39868698)
chr4 (297-341)||(40696161-40696205)
chr4 (295-339)||(56467598-56467642)
chr4 (282-345)||(1386176-1386239)
chr4 (295-345)||(9791595-9791646)
chr4 (295-345)||(16482110-16482161)
chr4 (295-345)||(51396214-51396265)
chr4 (295-345)||(21780177-21780227)
chr4 (295-345)||(56216895-56216945)
chr4 (302-339)||(21798524-21798561)
chr4 (295-339)||(16493580-16493624)
chr4 (282-345)||(18454249-18454313)
chr4 (302-345)||(18454386-18454430)
chr4 (112-144)||(46094264-46094296)
chr4 (282-345)||(55363860-55363923)
chr4 (295-339)||(56467477-56467520)
chr4 (295-342)||(6439370-6439417)
chr4 (295-342)||(10718095-10718142)
chr4 (295-342)||(10931864-10931911)
chr4 (282-345)||(11563349-11563411)
chr4 (295-342)||(45900610-45900657)
chr4 (295-345)||(43751230-43751280)
chr4 (112-145)||(6595267-6595300)
chr4 (295-344)||(18437172-18437220)
chr4 (112-144)||(550674-550706)
chr4 (112-144)||(3525892-3525924)
chr4 (295-335)||(10682748-10682788)
chr4 (295-335)||(10896388-10896428)
chr4 (112-144)||(11563541-11563573)
chr4 (112-144)||(20125442-20125474)
chr4 (112-144)||(21780123-21780155)
chr4 (112-144)||(24215765-24215797)
chr4 (112-144)||(27579768-27579800)
chr4 (112-144)||(37273419-37273451)
chr4 (112-144)||(50138489-50138521)
chr4 (282-345)||(53231829-53231893)
[»] chr6 (27 HSPs)
chr6 (283-345)||(3593396-3593458)
chr6 (296-345)||(9286258-9286307)
chr6 (282-345)||(24062334-24062397)
chr6 (295-345)||(3593524-3593574)
chr6 (295-345)||(4840741-4840790)
chr6 (295-345)||(30245891-30245941)
chr6 (295-345)||(30246015-30246065)
chr6 (295-344)||(7576133-7576182)
chr6 (297-345)||(31885984-31886031)
chr6 (295-345)||(5334699-5334749)
chr6 (296-345)||(7054135-7054185)
chr6 (282-345)||(13357525-13357589)
chr6 (302-345)||(9286390-9286433)
chr6 (285-342)||(12321007-12321065)
chr6 (295-345)||(12321132-12321182)
chr6 (295-341)||(29964603-29964648)
chr6 (112-141)||(3593599-3593628)
chr6 (103-143)||(56137-56177)
chr6 (295-339)||(1319178-1319221)
chr6 (112-144)||(3063507-3063539)
chr6 (112-144)||(10344051-10344083)
chr6 (112-144)||(13114399-13114431)
chr6 (112-144)||(14328670-14328702)
chr6 (112-144)||(14421680-14421712)
chr6 (112-140)||(18246148-18246176)
chr6 (112-144)||(24387785-24387817)
chr6 (112-144)||(29942467-29942499)
[»] chr3 (39 HSPs)
chr3 (295-345)||(19623961-19624011)
chr3 (295-345)||(5417218-5417268)
chr3 (295-345)||(12767118-12767168)
chr3 (295-345)||(22949433-22949483)
chr3 (282-345)||(30271600-30271663)
chr3 (295-344)||(25109887-25109937)
chr3 (295-345)||(30271729-30271778)
chr3 (282-345)||(27432757-27432821)
chr3 (295-339)||(36867698-36867742)
chr3 (295-341)||(5416120-5416167)
chr3 (295-345)||(7584305-7584353)
chr3 (295-345)||(22949302-22949353)
chr3 (295-345)||(27760344-27760395)
chr3 (283-345)||(29313953-29314016)
chr3 (295-345)||(30586219-30586270)
chr3 (295-345)||(30586348-30586399)
chr3 (295-345)||(10979903-10979952)
chr3 (295-345)||(46902054-46902104)
chr3 (296-341)||(43767720-43767765)
chr3 (282-345)||(3548293-3548357)
chr3 (282-341)||(49872887-49872947)
chr3 (303-345)||(36867815-36867858)
chr3 (295-345)||(49872771-49872822)
chr3 (282-345)||(53806735-53806798)
chr3 (295-345)||(25110013-25110062)
chr3 (295-345)||(27760472-27760522)
chr3 (283-345)||(43767831-43767893)
chr3 (295-345)||(46901928-46901978)
chr3 (308-345)||(12766994-12767030)
chr3 (282-345)||(3548177-3548241)
chr3 (112-144)||(6510216-6510248)
chr3 (112-144)||(19624034-19624066)
chr3 (112-144)||(30271545-30271577)
chr3 (112-144)||(47115586-47115618)
chr3 (112-144)||(49872973-49873005)
chr3 (112-144)||(49880761-49880793)
chr3 (282-345)||(51252221-51252285)
chr3 (112-144)||(51460787-51460819)
chr3 (112-144)||(54567767-54567799)
[»] chr5 (41 HSPs)
chr5 (282-345)||(31861547-31861610)
chr5 (282-345)||(31861664-31861727)
chr5 (282-345)||(20688851-20688914)
chr5 (282-344)||(36354722-36354783)
chr5 (295-345)||(42119240-42119289)
chr5 (296-345)||(24098489-24098538)
chr5 (295-345)||(26592378-26592429)
chr5 (295-345)||(20688981-20689030)
chr5 (296-345)||(21148853-21148903)
chr5 (283-344)||(33483064-33483126)
chr5 (295-345)||(35798634-35798684)
chr5 (282-340)||(39153562-39153620)
chr5 (282-345)||(12382881-12382945)
chr5 (282-345)||(21149038-21149102)
chr5 (112-144)||(36993007-36993039)
chr5 (295-339)||(37204931-37204975)
chr5 (113-144)||(16305133-16305164)
chr5 (302-345)||(24098622-24098664)
chr5 (295-345)||(33052872-33052923)
chr5 (302-345)||(35798515-35798558)
chr5 (295-345)||(40339386-40339437)
chr5 (307-345)||(40339500-40339539)
chr5 (295-345)||(9227035-9227085)
chr5 (295-345)||(11664129-11664178)
chr5 (105-143)||(15061848-15061886)
chr5 (295-345)||(22551699-22551748)
chr5 (295-341)||(24329467-24329513)
chr5 (300-345)||(35030873-35030919)
chr5 (295-345)||(39418902-39418952)
chr5 (282-326)||(9226925-9226969)
chr5 (112-144)||(10976771-10976803)
chr5 (282-345)||(12330909-12330973)
chr5 (305-345)||(12383005-12383045)
chr5 (112-144)||(12399610-12399642)
chr5 (296-343)||(20698472-20698520)
chr5 (112-144)||(22551523-22551555)
chr5 (112-144)||(26034846-26034878)
chr5 (112-144)||(29104445-29104477)
chr5 (112-144)||(37205004-37205036)
chr5 (112-144)||(38482319-38482351)
chr5 (297-345)||(38482374-38482422)
[»] scaffold0113 (2 HSPs)
scaffold0113 (295-345)||(28834-28884)
scaffold0113 (295-345)||(28127-28177)
[»] scaffold0032 (2 HSPs)
scaffold0032 (295-345)||(91232-91282)
scaffold0032 (112-144)||(91051-91083)
[»] scaffold0809 (2 HSPs)
scaffold0809 (282-345)||(3823-3885)
scaffold0809 (295-345)||(3949-3998)
[»] scaffold0740 (1 HSPs)
scaffold0740 (282-345)||(3702-3765)
[»] chr8 (29 HSPs)
chr8 (282-345)||(4105219-4105281)
chr8 (282-345)||(7988961-7989024)
chr8 (282-345)||(8315923-8315984)
chr8 (303-345)||(34985176-34985218)
chr8 (295-344)||(27198326-27198375)
chr8 (282-345)||(25601769-25601833)
chr8 (282-345)||(27198200-27198264)
chr8 (295-345)||(960326-960377)
chr8 (302-345)||(7988848-7988891)
chr8 (282-345)||(29726160-29726223)
chr8 (282-345)||(43121136-43121198)
chr8 (295-345)||(4105105-4105154)
chr8 (295-345)||(25601899-25601949)
chr8 (295-341)||(26447534-26447580)
chr8 (295-345)||(34019075-34019125)
chr8 (282-341)||(8388175-8388236)
chr8 (295-345)||(12330389-12330439)
chr8 (295-341)||(27987480-27987525)
chr8 (295-341)||(28044782-28044827)
chr8 (110-143)||(27164683-27164716)
chr8 (111-144)||(43400925-43400958)
chr8 (112-144)||(960521-960553)
chr8 (295-338)||(2696666-2696707)
chr8 (112-144)||(12330334-12330366)
chr8 (112-144)||(14329624-14329656)
chr8 (112-144)||(25277730-25277762)
chr8 (112-144)||(27543649-27543681)
chr8 (112-144)||(29309566-29309598)
chr8 (112-144)||(34985346-34985378)
[»] chr7 (56 HSPs)
chr7 (282-345)||(13279355-13279418)
chr7 (295-345)||(23314779-23314830)
chr7 (295-345)||(24204869-24204920)
chr7 (295-345)||(1693403-1693453)
chr7 (295-345)||(16902160-16902210)
chr7 (295-345)||(19979707-19979756)
chr7 (282-340)||(38193022-38193080)
chr7 (295-345)||(38193145-38193195)
chr7 (282-345)||(19410566-19410630)
chr7 (282-345)||(31186724-31186788)
chr7 (295-345)||(13279240-13279291)
chr7 (282-345)||(19272274-19272337)
chr7 (295-345)||(5021731-5021781)
chr7 (295-345)||(19410703-19410753)
chr7 (295-345)||(23371631-23371681)
chr7 (295-345)||(26930690-26930740)
chr7 (295-341)||(39580119-39580164)
chr7 (295-345)||(43251567-43251616)
chr7 (295-341)||(43251695-43251741)
chr7 (295-345)||(44414031-44414080)
chr7 (295-344)||(23784764-23784812)
chr7 (282-342)||(24205289-24205350)
chr7 (282-342)||(24206807-24206868)
chr7 (296-345)||(39118933-39118982)
chr7 (282-341)||(1693277-1693337)
chr7 (112-144)||(10688459-10688491)
chr7 (112-144)||(10980620-10980652)
chr7 (112-144)||(13882604-13882636)
chr7 (112-144)||(31186669-31186701)
chr7 (302-345)||(35913105-35913149)
chr7 (282-345)||(45163968-45164032)
chr7 (295-345)||(16902288-16902339)
chr7 (282-345)||(19272388-19272450)
chr7 (295-345)||(21298069-21298120)
chr7 (295-345)||(31186855-31186906)
chr7 (295-345)||(39119061-39119112)
chr7 (112-143)||(48168851-48168882)
chr7 (295-345)||(23784639-23784688)
chr7 (112-144)||(1594148-1594180)
chr7 (302-345)||(3624142-3624186)
chr7 (112-144)||(6269529-6269561)
chr7 (112-144)||(9915652-9915684)
chr7 (112-144)||(9923564-9923596)
chr7 (112-144)||(13279441-13279473)
chr7 (282-345)||(13286802-13286866)
chr7 (112-144)||(13797635-13797667)
chr7 (112-144)||(19272473-19272505)
chr7 (112-144)||(23371450-23371482)
chr7 (112-144)||(23784585-23784617)
chr7 (104-144)||(24555925-24555965)
chr7 (302-345)||(26050363-26050407)
chr7 (302-345)||(26059722-26059766)
chr7 (302-345)||(26930823-26930867)
chr7 (112-144)||(38193218-38193250)
chr7 (112-144)||(39580190-39580222)
chr7 (112-144)||(48945185-48945217)
[»] scaffold0041 (1 HSPs)
scaffold0041 (295-345)||(38105-38155)
[»] scaffold0031 (3 HSPs)
scaffold0031 (282-345)||(1996-2060)
scaffold0031 (295-341)||(1887-1934)
scaffold0031 (112-144)||(1828-1860)
[»] scaffold0450 (3 HSPs)
scaffold0450 (282-345)||(8033-8097)
scaffold0450 (295-345)||(7914-7967)
scaffold0450 (112-144)||(8119-8151)
[»] scaffold0136 (1 HSPs)
scaffold0136 (112-144)||(660-692)
[»] scaffold0727 (1 HSPs)
scaffold0727 (109-144)||(834-869)
[»] scaffold0026 (1 HSPs)
scaffold0026 (295-345)||(4613-4664)
[»] scaffold0769 (1 HSPs)
scaffold0769 (112-144)||(4175-4207)
[»] scaffold0384 (1 HSPs)
scaffold0384 (112-144)||(4451-4483)
[»] scaffold0142 (1 HSPs)
scaffold0142 (112-144)||(34850-34882)
[»] scaffold0010 (1 HSPs)
scaffold0010 (112-144)||(26309-26341)


Alignment Details
Target: chr1 (Bit Score: 74; Significance: 7e-34; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 31532165 - 31532289
Alignment:
Q  17 agaatttgttaaatttatgatgctgaattgatctcctttgatcgggttcccattgacattttttgtaaactattcgacaatggtatataaaataa-ggtt 115  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||| || || ||||||||||||| ||||    
T  31532165 agaatttgttaaatttatgatgctgaattgatctcctttcattgggtttccattgacattttttgtaaactattctactat-gtatataaaataagggtt 31532263  T
Q  116 aataggtctttaccctctgtaatata 141  Q
    ||||| ||||||| |  |||||||||    
T  31532264 aatagatctttactccttgtaatata 31532289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 31532428 - 31532491
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| || |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  31532428 gcctattagggaggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 31532491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 9043625 - 9043675
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  9043625 gtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 9043675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 5330525 - 5330476
Alignment:
Q  296 taaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  5330525 taaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 5330476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 28411085 - 28411149
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    |||||||||||  |||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  28411085 gcctattagaggggtaaatcaaaacaaaaatattttacagggggttgaatcaaaataaaaatttt 28411149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 5330592 - 5330655
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  5330592 gcctattaggggggtaaatcaaaacaaaaatattttacaggtggtgaatcaaaataaaaatttt 5330655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 51904098 - 51904035
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| || |||||| ||||||||||||| |||||  |||||||||||||||||||||||    
T  51904098 gcctattagggaggtaaatcaaaacaaaaatatattacacggggtgaatcaaaataaaaatttt 51904035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 6540869 - 6540919
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||| || |||||||||||||||||||||||    
T  6540869 gtaaatcaaaacaaaaatattttatagggggtgaatcaaaataaaaatttt 6540919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 13154686 - 13154636
Alignment:
Q  295 gtaaataaaaacaaaaatattttacaga-gggtgaatcaaaataaaaattt 344  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  13154686 gtaaatcaaaacaaaaatattttacagaggggtgaatcaaaataaaaattt 13154636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 46561491 - 46561441
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||||||    
T  46561491 gtaaatcaaaacaaaaatattttacagggtgtgaatcaaaataaaaatttt 46561441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 16698990 - 16698925
Alignment:
Q  282 gcctattagagacgtaaat-aaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    |||||||||||  |||||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  16698990 gcctattagagtggtaaatcaaaaacaaaaatattttacaggggggtgaatcaaaataaaaatttt 16698925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 4646877 - 4646813
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  4646877 gcctattaggggggtaaatcaaaacaaaaatattttacagggggttgaatcaaaataaaaatttt 4646813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 341
Target Start/End: Original strand, 5348307 - 5348366
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    ||||||||| |  |||||| ||||||||||||||||||||  ||||||||||||||||||    
T  5348307 gcctattaggggggtaaatcaaaacaaaaatattttacaggtggtgaatcaaaataaaaa 5348366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 7112673 - 7112724
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  7112673 gtaaatcaaaacaaaaatattttacagggggttgaatcaaaataaaaatttt 7112724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 16699055 - 16699106
Alignment:
Q  295 gtaaataaaaacaaaaatattttacag-agggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  16699055 gtaaatcaaaacaaaaatattttacagtggggtgaatcaaaataaaaatttt 16699106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 21853950 - 21854000
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||| |  |||||||||||||||||||||    
T  21853950 gtaaatcaaaacaaaaatattttacaaatagtgaatcaaaataaaaatttt 21854000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 341
Target Start/End: Complemental strand, 46136191 - 46136146
Alignment:
Q  296 taaataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||||    
T  46136191 taaatcaaaacaaaaatattttacaggaggtgaatcaaaataaaaa 46136146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 4647937 - 4647897
Alignment:
Q  104 taaaataaggttaataggtctttaccctctgtaatataggt 144  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  4647937 taaaaaaaggttaatagatctttaccctctgtaatataggt 4647897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 5348164 - 5348196
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    |||||||||||||||||||||||||||||||||    
T  5348164 ggttaataggtctttaccctctgtaatataggt 5348196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 24987601 - 24987641
Alignment:
Q  104 taaaataaggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  24987601 taaaatagggttaataggtctttaccccctgtaatataggt 24987641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 27794477 - 27794413
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttaca-gagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| ||||||||||||||||||| | |||||||||||||||||| ||||    
T  27794477 gcctattaggggggtaaatcaaaacaaaaatattttacaggggggtgaatcaaaataaaattttt 27794413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 27794551 - 27794595
Alignment:
Q  302 aaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||    
T  27794551 aaaacaaaaatattttacaggggggtgaatcaaaataaaaatttt 27794595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 28724467 - 28724531
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||||| ||| | ||||||||||||||||||    
T  28724467 gcctattaggggggtaaatcaaaacaaaaatattttacagggggataaatcaaaataaaaatttt 28724531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 32131971 - 32131927
Alignment:
Q  100 tatataaaataaggttaataggtctttaccctctgtaatataggt 144  Q
    |||| |||||| ||||||||||||||||||| |||||||||||||    
T  32131971 tataaaaaatagggttaataggtctttaccccctgtaatataggt 32131927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 342
Target Start/End: Complemental strand, 21853523 - 21853476
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaat 342  Q
    |||||| |||||||||||||||||||| |||| |||||||| ||||||    
T  21853523 gtaaattaaaacaaaaatattttacagggggtaaatcaaaacaaaaat 21853476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 142
Target Start/End: Original strand, 16698870 - 16698900
Alignment:
Q  112 ggttaataggtctttaccctctgtaatatag 142  Q
    |||||||||||||||||||||||||||||||    
T  16698870 ggttaataggtctttaccctctgtaatatag 16698900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 345
Target Start/End: Original strand, 29018536 - 29018598
Alignment:
Q  284 ctattagagacgtaaataaaaacaaaaatattttacagag-ggtgaatcaaaataaaaatttt 345  Q
    |||||||||  |||||| |||||||||||||||||||| | ||| ||| ||||||||||||||    
T  29018536 ctattagaggggtaaatcaaaacaaaaatattttacagggaggtaaattaaaataaaaatttt 29018598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 47021943 - 47021897
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    |||||| ||| |||||||||||||||  |||||||||||||||||||    
T  47021943 gtaaatcaaatcaaaaatattttacatggggtgaatcaaaataaaaa 47021897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 340
Target Start/End: Original strand, 47022019 - 47022065
Alignment:
Q  295 gtaaataaaaacaaaaatattttacaga-gggtgaatcaaaataaaa 340  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||    
T  47022019 gtaaatcaaaacaaaaatattttacaaaggggtgaatcaaaataaaa 47022065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 7112599 - 7112550
Alignment:
Q  296 taaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||| ||||||||||| |||||||  |||| ||||||||||||||||||    
T  7112599 taaatcaaaacaaaaatgttttacaaggggtaaatcaaaataaaaatttt 7112550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 2472640 - 2472608
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  2472640 ggttaataggtctttaccccctgtaatataggt 2472608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 4646944 - 4646992
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatt 343  Q
    |||||| |||||||||| ||||||||| ||||  |||||||||||||||    
T  4646944 gtaaatcaaaacaaaaacattttacagggggtatatcaaaataaaaatt 4646992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 141
Target Start/End: Complemental strand, 7112780 - 7112748
Alignment:
Q  109 taaggttaataggtctttaccctctgtaatata 141  Q
    |||||||||||||||||||||| ||||||||||    
T  7112780 taaggttaataggtctttaccccctgtaatata 7112748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 9439458 - 9439426
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  9439458 ggttaataggtctttaccccctgtaatataggt 9439426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 10028033 - 10028001
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  10028033 ggttaataggtctttaccccctgtaatataggt 10028001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 345
Target Start/End: Original strand, 15790438 - 15790474
Alignment:
Q  310 aatattttacag-agggtgaatcaaaataaaaatttt 345  Q
    |||||||||||| ||||||||||||||||||||||||    
T  15790438 aatattttacaggagggtgaatcaaaataaaaatttt 15790474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 18458858 - 18458826
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  18458858 ggttaataggtctttaccccctgtaatataggt 18458826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 25235775 - 25235807
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  25235775 ggttaataggtctttaccccctgtaatataggt 25235807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 26095815 - 26095847
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  26095815 ggttaataggtctttaccccctgtaatataggt 26095847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 26097083 - 26097051
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  26097083 ggttaataggtctttaccccctgtaatataggt 26097051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 47022125 - 47022093
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  47022125 ggttaataggtctttaccccctgtaatataggt 47022093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 50596114 - 50596162
Alignment:
Q  297 aaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||| |||||||||||||||||| | || |||||||||||| |||||||    
T  50596114 aaatcaaaacaaaaatattttacgggggatgaatcaaaatataaatttt 50596162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 284 - 345
Target Start/End: Original strand, 28484532 - 28484593
Alignment:
Q  284 ctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  28484532 ctattagagatgtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 28484593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 17328263 - 17328327
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    |||||||||||| |||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  17328263 gcctattagagaggtaaatcaaaacaaaaatattttacagggggttgaatcaaaataaaaatttt 17328327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 282 - 341
Target Start/End: Original strand, 39227965 - 39228024
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    |||||||||||  |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  39227965 gcctattagaggagtaaatcaaaacaaaaatattttacagagggtgaatcataataaaaa 39228024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 9011862 - 9011812
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  9011862 gtaaatcaaaacaaaaatattttacggagggtgaatcaaaataaaaatttt 9011812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 23260425 - 23260375
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  23260425 gtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 23260375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 29098124 - 29098074
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  29098124 gtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 29098074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 282 - 339
Target Start/End: Original strand, 37147723 - 37147780
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaa 339  Q
    ||||||||| || |||||| ||||||||||||||||||||| ||||||||||||||||    
T  37147723 gcctattagggaggtaaatcaaaacaaaaatattttacagaaggtgaatcaaaataaa 37147780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 38386100 - 38386160
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatt 343  Q
    ||||||||| || |||||| |||||||||||||||||||| |||||||||||||||||||||    
T  38386100 gcctattagggaggtaaatcaaaacaaaaatattttacag-gggtgaatcaaaataaaaatt 38386160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 29098187 - 29098251
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttaca-gagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| || |||||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  29098187 gcctattagggaggtaaatgaaaacaaaaatattttacaggggggtgaatcaaaataaaaatttt 29098251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 3364499 - 3364562
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| || |||||| ||||||||||||||||||||  | ||||||||||||||||||||    
T  3364499 gcctattagggaggtaaatcaaaacaaaaatattttacaggagatgaatcaaaataaaaatttt 3364562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 28149553 - 28149490
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  28149553 gcctattaggggggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaattttt 28149490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 1498992 - 1498942
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  1498992 gtaaatcaaaacaaaaatattttacatggggtgaatcaaaataaaaatttt 1498942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 30371491 - 30371441
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  30371491 gtaaatcaaaacaaaaatattttacagggggtgaataaaaataaaaatttt 30371441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 1499065 - 1499114
Alignment:
Q  296 taaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||| ||||||||||||||||| || |||||||||||||||||||||||    
T  1499065 taaatcaaaacaaaaatattttaaagggggtgaatcaaaataaaaatttt 1499114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 339
Target Start/End: Complemental strand, 28484478 - 28484421
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaa 339  Q
    ||||||||| |  |||||| |||||||||||||||||||| |||||||||||||||||    
T  28484478 gcctattaggggggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaa 28484421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 38210968 - 38210920
Alignment:
Q  297 aaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  38210968 aaatcaaaacaaaaatattttacaggaggtgaatcaaaataaaaatttt 38210920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 338
Target Start/End: Complemental strand, 16577221 - 16577178
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataa 338  Q
    |||||| ||||||||||||||||||||||| |||||||||||||    
T  16577221 gtaaatcaaaacaaaaatattttacagaggatgaatcaaaataa 16577178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 17328211 - 17328148
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||||| ||| |||||| |||||||||| ||||||||| | || ||||||||||||||||||    
T  17328211 gcctattaaagaggtaaatcaaaacaaaaacattttacagggtgtaaatcaaaataaaaatttt 17328148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 28110355 - 28110313
Alignment:
Q  298 aataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  28110355 aataaaaacaaaaatattttacag-gggtgaatcaaaataaaaa 28110313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 341
Target Start/End: Complemental strand, 37243525 - 37243480
Alignment:
Q  296 taaataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    ||||| |||||||||||||||||||| || ||||||||||||||||    
T  37243525 taaatcaaaacaaaaatattttacagtggatgaatcaaaataaaaa 37243480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 41089143 - 41089188
Alignment:
Q  99 gtatataaaataaggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||    
T  41089143 gtatataaaaataggttaataggtctttaacctctgtaatataggt 41089188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 22535621 - 22535685
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| ||||||||||| ||||||| |||| ||||||||||||||||||||    
T  22535621 gcctattaggggggtaaatcaaaacaaaaatgttttacaaagggttgaatcaaaataaaaatttt 22535685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 33641133 - 33641165
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    |||||||||||||||||||||||||||||||||    
T  33641133 ggttaataggtctttaccctctgtaatataggt 33641165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 37147670 - 37147606
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttaca-gagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| ||||||||||||||||| | | |||||||||||||||||||||||    
T  37147670 gcctattaggggggtaaatcaaaacaaaaatattttataagggggtgaatcaaaataaaaatttt 37147606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 85546 - 85499
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaa 341  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  85546 gtaaatcaaaacaaaaatattttacagggggatgaatcaaaataaaaa 85499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 3364445 - 3364387
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    ||||||||| |  |||||| |||||||||||| ||||||| |||||||||||||||||||    
T  3364445 gcctattagggtggtaaatcaaaacaaaaatactttacag-gggtgaatcaaaataaaaa 3364387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 341
Target Start/End: Original strand, 9011942 - 9011981
Alignment:
Q  302 aaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  9011942 aaaacaaaaatattttacaaggggtgaatcaaaataaaaa 9011981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 25926886 - 25926921
Alignment:
Q  109 taaggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| ||||||||||||||||    
T  25926886 taaggttaataggtctttatcctctgtaatataggt 25926921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 28149617 - 28149668
Alignment:
Q  295 gtaaataaaaacaaaaatattttac-agagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  28149617 gtaaatcaaaacaaaaatattttacaaggcggtgaatcaaaataaaaatttt 28149668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 38385929 - 38385968
Alignment:
Q  105 aaaataaggttaataggtctttaccctctgtaatataggt 144  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  38385929 aaaaaaaggttaataggtctttaccccctgtaatataggt 38385968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 38386051 - 38385989
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| || |||||| |||||||||| ||| |||||  ||||||||||||||||||||||    
T  38386051 gcctattag-gaggtaaatcaaaacaaaaacattctacaggaggtgaatcaaaataaaaatttt 38385989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 38625095 - 38625137
Alignment:
Q  302 aaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||||||||||||||| | ||||||||||||||||||||    
T  38625095 aaaacaaaaatattttacaga-gatgaatcaaaataaaaatttt 38625137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 2809615 - 2809652
Alignment:
Q  104 taaaataaggttaataggtctttaccctctgtaatata 141  Q
    ||||| || |||||||||||||||||||||||||||||    
T  2809615 taaaaaaaagttaataggtctttaccctctgtaatata 2809652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 16670498 - 16670531
Alignment:
Q  110 aaggttaataggtctttaccctctgtaatatagg 143  Q
    ||||||||||||||||||||| ||||||||||||    
T  16670498 aaggttaataggtctttaccccctgtaatatagg 16670531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 38210865 - 38210898
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggta 145  Q
    ||||||||||||||||||| ||||||||||||||    
T  38210865 ggttaataggtctttaccccctgtaatataggta 38210898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 85622 - 85666
Alignment:
Q  295 gtaaataaaaacaaaaatattttaca-gagggtgaatcaaaataa 338  Q
    |||||| ||| ||||||||||||||| ||||||||||||||||||    
T  85622 gtaaatcaaatcaaaaatattttacaggagggtgaatcaaaataa 85666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 16577403 - 16577371
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  16577403 ggttaataggtctttaccccctgtaatataggt 16577371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 17328093 - 17328125
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  17328093 ggttaataggtctttaccccctgtaatataggt 17328125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 19493504 - 19493472
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  19493504 ggttaataggtctttaccccctgtaatataggt 19493472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 19641447 - 19641479
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  19641447 ggttaataggtctttaccccctgtaatataggt 19641479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 19840040 - 19840072
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  19840040 ggttaataggtctttaccccctgtaatataggt 19840072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 22116156 - 22116188
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  22116156 ggttaataggtctttaccccctgtaatataggt 22116188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 29835103 - 29835135
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  29835103 ggttaataggtctttaccccctgtaatataggt 29835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 29835352 - 29835324
Alignment:
Q  112 ggttaataggtctttaccctctgtaatat 140  Q
    |||||||||||||||||||||||||||||    
T  29835352 ggttaataggtctttaccctctgtaatat 29835324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 34428635 - 34428667
Alignment:
Q  109 taaggttaataggtctttaccctctgtaatata 141  Q
    |||||||||||||||||||||| ||||||||||    
T  34428635 taaggttaataggtctttaccccctgtaatata 34428667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 34635707 - 34635739
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  34635707 ggttaataggtctttaccccctgtaatataggt 34635739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 37147552 - 37147584
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  37147552 ggttaataggtctttaccccctgtaatataggt 37147584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 38937569 - 38937533
Alignment:
Q  107 aataaggttaataggtctttaccctctgtaatatagg 143  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  38937569 aatagggttaataggtctttaccccctgtaatatagg 38937533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 17289914 - 17289977
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| | ||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  17289914 gcctattaggggcgtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 17289977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 9001550 - 9001500
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  9001550 gtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 9001500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 16493672 - 16493722
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  16493672 gtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 16493722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 17289849 - 17289799
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  17289849 gtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 17289799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 39868574 - 39868524
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  39868574 gtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 39868524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 44561557 - 44561507
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  44561557 gtaaattaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 44561507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 45900723 - 45900786
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  45900723 gcctattaggggggtaaatcaaaacaaaaatattttacaaagggtgaatcaaaataaaattttt 45900786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 21780306 - 21780356
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  21780306 gtaaatcaaaaccaaaatattttacagggggtgaatcaaaataaaaatttt 21780356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 22273036 - 22272990
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||    
T  22273036 gtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaa 22272990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 47321091 - 47321042
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  47321091 gtaaatcaaaacaaaaatattttacag-gggtgaatcaaaataaaaatttt 47321042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 17313011 - 17313055
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaa 339  Q
    |||||| |||||||||||||||||||| |||||||||||||||||    
T  17313011 gtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaa 17313055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 21798439 - 21798391
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatt 343  Q
    |||||| |||||||||||||||||||| || ||||||||||||||||||    
T  21798439 gtaaatcaaaacaaaaatattttacaggggatgaatcaaaataaaaatt 21798391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 39868650 - 39868698
Alignment:
Q  297 aaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  39868650 aaatcaaaacaaaaatattttacagggggtgaatcaaaataaaattttt 39868698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 40696161 - 40696205
Alignment:
Q  297 aaataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    |||| |||||||||||||||||||| |||||||||||||||||||    
T  40696161 aaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaa 40696205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 56467598 - 56467642
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaa 339  Q
    |||||| |||||||||||||||||||| |||||||||||||||||    
T  56467598 gtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaa 56467642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 1386176 - 1386239
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||||| || | ||||||||||||||||||    
T  1386176 gcctattaggggggtaaattaaaacaaaaatattttacaggggataaatcaaaataaaaatttt 1386239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 9791595 - 9791646
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  9791595 gtaaatcaaaacaaaaatattttacagggggttgaatcaaaataaaaatttt 9791646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 16482161 - 16482110
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||||||    
T  16482161 gtaaatcaaaacaaaaatatcttacagagggatgaatcaaaataaaaatttt 16482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 51396265 - 51396214
Alignment:
Q  295 gtaaataaaaacaaaaatattttacag-agggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||| |||||||||||||||||||    
T  51396265 gtaaatcaaaacaaaaatattttacagtagggcgaatcaaaataaaaatttt 51396214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 21780227 - 21780177
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||| |||||||||||||  |||||||||||||||||||||||    
T  21780227 gtaaattaaaaccaaaatattttacatggggtgaatcaaaataaaaatttt 21780177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 56216895 - 56216945
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||  | ||||||||||||||||||||||    
T  56216895 gtaaatcaaaacaaaaatattttacgaaaggtgaatcaaaataaaaatttt 56216945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 21798524 - 21798561
Alignment:
Q  302 aaaacaaaaatattttacagagggtgaatcaaaataaa 339  Q
    |||||||||||||||||||| |||||||||||||||||    
T  21798524 aaaacaaaaatattttacagggggtgaatcaaaataaa 21798561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 16493624 - 16493580
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaa 339  Q
    |||||| |||||||||||||||||||| | |||||||||||||||    
T  16493624 gtaaatcaaaacaaaaatattttacagggagtgaatcaaaataaa 16493580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 18454313 - 18454249
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttac-agagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||| || ||||| |||||||||||||||||    
T  18454313 gcctattaggggggtaaatcaaaacaaaaatattttacaagggggtgtatcaaaataaaaatttt 18454249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 18454386 - 18454430
Alignment:
Q  302 aaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||    
T  18454386 aaaacaaaaatattttacaggggggtgaatcaaaataaaaatttt 18454430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 46094296 - 46094264
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    |||||||||||||||||||||||||||||||||    
T  46094296 ggttaataggtctttaccctctgtaatataggt 46094264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 55363860 - 55363923
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaa-tattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||||||||  |||||| |||||||||| ||||||| || |||||||||||||||||||||||    
T  55363860 gcctattagaggtgtaaatcaaaacaaaaaatattttatag-gggtgaatcaaaataaaaatttt 55363923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 56467520 - 56467477
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaa 339  Q
    |||||| |||||||||||||||||||| |||||||||||||||||    
T  56467520 gtaaatcaaaacaaaaatattttacag-gggtgaatcaaaataaa 56467477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 342
Target Start/End: Original strand, 6439370 - 6439417
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaat 342  Q
    ||||||||||||||||||||||||||| |||| ||| |||| ||||||    
T  6439370 gtaaataaaaacaaaaatattttacagggggtaaataaaaaaaaaaat 6439417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 342
Target Start/End: Original strand, 10718095 - 10718142
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaat 342  Q
    ||||||||||||||||||||||||||| |||| |||| ||| ||||||    
T  10718095 gtaaataaaaacaaaaatattttacagcgggtaaatccaaaaaaaaat 10718142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 342
Target Start/End: Original strand, 10931864 - 10931911
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaat 342  Q
    ||||||||||||||||||||||||||| |||| |||| ||| ||||||    
T  10931864 gtaaataaaaacaaaaatattttacagcgggtaaatccaaaaaaaaat 10931911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 11563411 - 11563349
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| ||||||||||||||| || | |||||||||||||||||||||||    
T  11563411 gcctattaggggggtaaatcaaaacaaaaatatttcacgg-gggtgaatcaaaataaaaatttt 11563349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 342
Target Start/End: Complemental strand, 45900657 - 45900610
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaat 342  Q
    |||||| |||||||||||||||||||| |||| |||||||| ||||||    
T  45900657 gtaaatcaaaacaaaaatattttacagggggtaaatcaaaacaaaaat 45900610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 43751230 - 43751280
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||||  | ||||| ||||||||||||||    
T  43751230 gtaaatcaaaacaaaaatattttacaggagatgaattaaaataaaaatttt 43751280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 6595300 - 6595267
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggta 145  Q
    ||||||||||| ||||||||||||||||||||||    
T  6595300 ggttaataggtttttaccctctgtaatataggta 6595267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 18437220 - 18437172
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaattt 344  Q
    |||||| |||||||||||||||||||  || |||||||||||||||||||    
T  18437220 gtaaatcaaaacaaaaatattttaca-tggatgaatcaaaataaaaattt 18437172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 550674 - 550706
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  550674 ggttaataggtctttaccccctgtaatataggt 550706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 3525924 - 3525892
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    |||||||| ||||||||||||||||||||||||    
T  3525924 ggttaataagtctttaccctctgtaatataggt 3525892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 10682788 - 10682748
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaa 335  Q
    |||||| |||||||||||||||||||| |||| ||||||||    
T  10682788 gtaaatcaaaacaaaaatattttacagggggtaaatcaaaa 10682748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 10896428 - 10896388
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaa 335  Q
    |||||| |||||||||||||||||||| |||| ||||||||    
T  10896428 gtaaatcaaaacaaaaatattttacagggggtaaatcaaaa 10896388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 11563573 - 11563541
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  11563573 ggttaataggtctttaccccctgtaatataggt 11563541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 20125474 - 20125442
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  20125474 ggttaataggtctttaccccctgtaatataggt 20125442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 21780123 - 21780155
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  21780123 ggttaataggtctttaccccctgtaatataggt 21780155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 24215797 - 24215765
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  24215797 ggttaataggtctttaccccctgtaatataggt 24215765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 27579800 - 27579768
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    |||||||| ||||||||||||||||||||||||    
T  27579800 ggttaatatgtctttaccctctgtaatataggt 27579768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 37273451 - 37273419
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  37273451 ggttaataggtctttaccccctgtaatataggt 37273419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 50138489 - 50138521
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  50138489 ggttaataggtctttaccccctgtaatataggt 50138521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 53231893 - 53231829
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttac-agagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||| || || | ||||||||||||||||||    
T  53231893 gcctattaggggggtaaatgaaaacaaaaatattttacaaggggataaatcaaaataaaaatttt 53231829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 9e-18; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 3593458 - 3593396
Alignment:
Q  283 cctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||||| || |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  3593458 cctattagggaggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 3593396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 9286307 - 9286258
Alignment:
Q  296 taaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  9286307 taaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 9286258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 24062334 - 24062397
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||||| | |||||||||||||||||||||    
T  24062334 gcctattaggggggtaaatcaaaacaaaaatattttacagtgagtgaatcaaaataaaaatttt 24062397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 3593524 - 3593574
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||| |||| |||||||||||||||||||||||    
T  3593524 gtaaatcaaaacaaaaatatttaacagggggtgaatcaaaataaaaatttt 3593574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 4840790 - 4840741
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  4840790 gtaaatcaaaacaaaaatattttacag-gggtgaatcaaaataaaaatttt 4840741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 30245941 - 30245891
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||| || |||||||||||||||||||||||    
T  30245941 gtaaatcaaaacaaaaatattttatagggggtgaatcaaaataaaaatttt 30245891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 30246015 - 30246065
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  30246015 gtaaatcaaaactaaaatattttacagggggtgaatcaaaataaaaatttt 30246065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 7576182 - 7576133
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaattt 344  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  7576182 gtaaattaaaacaaaaatattttacaaggggtgaatcaaaataaaaattt 7576133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 31885984 - 31886031
Alignment:
Q  297 aaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  31885984 aaatcaaaacaaaaatattttacag-gggtgaatcaaaataaaaatttt 31886031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 5334749 - 5334699
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||  |||| ||||||||||||||||||    
T  5334749 gtaaatcaaaacaaaaatattttacaaggggtaaatcaaaataaaaatttt 5334699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 7054185 - 7054135
Alignment:
Q  296 taaataaaaacaaaaatattttacagag-ggtgaatcaaaataaaaatttt 345  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  7054185 taaatcaaaacaaaaatattttacagggaggtgaatcaaaataaaaatttt 7054135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 13357525 - 13357589
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    ||||||||| | ||||||| |||||||||||||||||||| ||| ||||| ||||||||| ||||    
T  13357525 gcctattaggggcgtaaatcaaaacaaaaatattttacagggggatgaattaaaataaaattttt 13357589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 9286390 - 9286433
Alignment:
Q  302 aaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||||||||||||   |||||||||||||||||||||||    
T  9286390 aaaacaaaaatattttacttggggtgaatcaaaataaaaatttt 9286433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 12321065 - 12321007
Alignment:
Q  285 tattagagacgtaaataaaaacaaaaatattttacagagg-gtgaatcaaaataaaaat 342  Q
    ||||||||  |||||| |||||||||||||||||||| ||  |||||||||||||||||    
T  12321065 tattagaggggtaaatcaaaacaaaaatattttacaggggattgaatcaaaataaaaat 12321007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 12321132 - 12321182
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||||   || ||||||||||||||||||    
T  12321132 gtaaatcaaaacaaaaatattttacaggatgtaaatcaaaataaaaatttt 12321182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 29964603 - 29964648
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    |||||| |||||||| |||||||||||| ||||||||||||||||||    
T  29964603 gtaaatcaaaacaaacatattttacaga-ggtgaatcaaaataaaaa 29964648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 3593628 - 3593599
Alignment:
Q  112 ggttaataggtctttaccctctgtaatata 141  Q
    ||||||||||||||||||||||||||||||    
T  3593628 ggttaataggtctttaccctctgtaatata 3593599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 56177 - 56137
Alignment:
Q  103 ataaaataaggttaataggtctttaccctctgtaatatagg 143  Q
    ||||| || ||||||||||||||||||| ||||||||||||    
T  56177 ataaagtagggttaataggtctttaccccctgtaatatagg 56137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 1319221 - 1319178
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaa 339  Q
    |||||| |||||||||||||||||||| | |||||||||||||||    
T  1319221 gtaaatcaaaacaaaaatattttacag-gagtgaatcaaaataaa 1319178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 3063539 - 3063507
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  3063539 ggttaataggtctttaccccctgtaatataggt 3063507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 10344051 - 10344083
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  10344051 ggttaataggtctttaccccctgtaatataggt 10344083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 13114399 - 13114431
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  13114399 ggttaataggtctttaccccctgtaatataggt 13114431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 14328702 - 14328670
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  14328702 ggttaataggtctttaccccctgtaatataggt 14328670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 14421712 - 14421680
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  14421712 ggttaataggtctttaccccctgtaatataggt 14421680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 18246148 - 18246176
Alignment:
Q  112 ggttaataggtctttaccctctgtaatat 140  Q
    |||||||||||||||||||||||||||||    
T  18246148 ggttaataggtctttaccctctgtaatat 18246176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 24387817 - 24387785
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  24387817 ggttaataggtctttaccccctgtaatataggt 24387785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 29942499 - 29942467
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  29942499 ggttaataggtctttaccccctgtaatataggt 29942467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 9e-18; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 19623961 - 19624011
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19623961 gtaaatcaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 19624011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 5417218 - 5417268
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  5417218 gtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 5417268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 12767118 - 12767168
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  12767118 gtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 12767168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 22949433 - 22949483
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  22949433 gtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 22949483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 30271663 - 30271600
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  30271663 gcctattaggggggtaaatcaaaacaaaaatattttacaggaggtgaatcaaaataaaaatttt 30271600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 25109937 - 25109887
Alignment:
Q  295 gtaaataaaaacaaaaatattttacaga-gggtgaatcaaaataaaaattt 344  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  25109937 gtaaatcaaaacaaaaatattttacagaggggtgaatcaaaataaaaattt 25109887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 30271729 - 30271778
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  30271729 gtaaatcaaaacaaaaatattttacag-gggtgaatcaaaataaaaatttt 30271778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 27432757 - 27432821
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttac-agagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||| || |||||||||||||||||||||||    
T  27432757 gcctattaggggggtaaatcaaaacaaaaatattttacaagggggtgaatcaaaataaaaatttt 27432821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 36867742 - 36867698
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaa 339  Q
    |||||| |||||||||||||||||||| |||||||||||||||||    
T  36867742 gtaaatgaaaacaaaaatattttacagggggtgaatcaaaataaa 36867698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 5416167 - 5416120
Alignment:
Q  295 gtaaataaaaacaaaaatattttacaga-gggtgaatcaaaataaaaa 341  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  5416167 gtaaatcaaaacaaaaatattttacagaggggtgaatcaaaataaaaa 5416120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 7584353 - 7584305
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  7584353 gtaaatcaaaacaaaaatattttacag--ggtgaatcaaaataaaaatttt 7584305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 22949353 - 22949302
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  22949353 gtaaatcaaaacaaaaatattttacaggggggtgaatcaaaataaaaatttt 22949302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 27760395 - 27760344
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  27760395 gtaaatcaaaacaaaaatattttacagggggttgaatcaaaataaaaatttt 27760344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 29313953 - 29314016
Alignment:
Q  283 cctattagagacgtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    ||||||||||   ||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  29313953 cctattagagggataaatcaaaacaaaaatattttacagggggttgaatcaaaataaaaatttt 29314016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 30586270 - 30586219
Alignment:
Q  295 gtaaataaaaacaaaaatattttaca-gagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||| ||||    
T  30586270 gtaaatcaaaacaaaaatattttacaggagggtgaatcaaaataaaattttt 30586219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 30586348 - 30586399
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagag-ggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  30586348 gtaaatcaaaacaaaaatattttacagggaggtgaatcaaaataaaaatttt 30586399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 10979952 - 10979903
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||| | |||||||||||||||||||||||    
T  10979952 gtaaatcaaaacaaaaatattttacgg-gggtgaatcaaaataaaaatttt 10979903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 46902054 - 46902104
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||| |  |||||||||||||||||||||||    
T  46902054 gtaaatcaaaacaaaaatattttatatggggtgaatcaaaataaaaatttt 46902104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 341
Target Start/End: Complemental strand, 43767765 - 43767720
Alignment:
Q  296 taaataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  43767765 taaatcaaaacaaaaatattttacagaaggtaaatcaaaataaaaa 43767720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 3548293 - 3548357
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttac-agagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||| || |||||||||||||||||| ||||    
T  3548293 gcctattaggggggtaaatcaaaacaaaaatattttacaagggggtgaatcaaaataaaattttt 3548357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 341
Target Start/End: Original strand, 49872887 - 49872947
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttac-agagggtgaatcaaaataaaaa 341  Q
    ||||||||| |  |||||| |||||||||||||||||| || |||||||||||||||||||    
T  49872887 gcctattaggggggtaaatcaaaacaaaaatattttacaagggggtgaatcaaaataaaaa 49872947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 36867815 - 36867858
Alignment:
Q  303 aaacaaaaatattttaca-gagggtgaatcaaaataaaaatttt 345  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  36867815 aaacaaaaatattttacaagggggtgaatcaaaataaaaatttt 36867858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 49872822 - 49872771
Alignment:
Q  295 gtaaataaaaacaaaaatattttaca-gagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||| | |||||||||||||||||| ||||    
T  49872822 gtaaatcaaaacaaaaatattttacaggggggtgaatcaaaataaaactttt 49872771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 53806735 - 53806798
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| || |||||| ||||||||||  ||||||||||||| |||||||| ||| |||||    
T  53806735 gcctattagtgaggtaaatcaaaacaaaaaatttttacagagggtaaatcaaaaaaaatatttt 53806798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 25110013 - 25110062
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||   |||||||||||||||||||||||    
T  25110013 gtaaatcaaaacaaaaatattttactc-gggtgaatcaaaataaaaatttt 25110062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 27760472 - 27760522
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||  | || ||||||||||||||||||    
T  27760472 gtaaatcaaaacaaaaatattttacaaggagtaaatcaaaataaaaatttt 27760522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 43767831 - 43767893
Alignment:
Q  283 cctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||||  |||||| ||||||||||||||||| |   | ||||||||||||||||||||    
T  43767831 cctattagaggggtaaatcaaaacaaaaatattttatatgagttgaatcaaaataaaaatttt 43767893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 46901978 - 46901928
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||| |||| |  ||||||||||||||||||||    
T  46901978 gtaaatcaaaacaaaaatatttaacagggtatgaatcaaaataaaaatttt 46901928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 345
Target Start/End: Complemental strand, 12767030 - 12766994
Alignment:
Q  308 aaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||||||||||| |||||||||||||||||||||||    
T  12767030 aaaatattttacag-gggtgaatcaaaataaaaatttt 12766994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 3548241 - 3548177
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttac-agagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| ||||||||||||||||||  | |||||||||||||||||| ||||    
T  3548241 gcctattaggggggtaaatcaaaacaaaaatattttacgggggggtgaatcaaaataaaattttt 3548177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 6510216 - 6510248
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  6510216 ggttaataggtctttaccccctgtaatataggt 6510248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 19624066 - 19624034
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    |||||||||||||||| ||||||||||||||||    
T  19624066 ggttaataggtctttatcctctgtaatataggt 19624034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 30271545 - 30271577
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||| |||||||||||||||||||||||    
T  30271545 ggttaatagttctttaccctctgtaatataggt 30271577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 47115618 - 47115586
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  47115618 ggttaataggtctttaccccctgtaatataggt 47115586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 49873005 - 49872973
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  49873005 ggttaataggtctttaccccctgtaatataggt 49872973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 49880793 - 49880761
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  49880793 ggttaataggtctttaccccctgtaatataggt 49880761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 51252221 - 51252285
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttaca-gagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| || |||||| ||||||||||||||||||| | |||| |||||||| ||| |||||    
T  51252221 gcctattagggaggtaaatcaaaacaaaaatattttacaggggggtaaatcaaaaaaaatatttt 51252285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 51460819 - 51460787
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  51460819 ggttaataggtctttaccccctgtaatataggt 51460787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 54567799 - 54567767
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  54567799 ggttaataggtctttaccccctgtaatataggt 54567767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 31861610 - 31861547
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  31861610 gcctattaggggggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 31861547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 31861664 - 31861727
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  31861664 gcctattaggggggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 31861727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 20688914 - 20688851
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  20688914 gcctattaggggggtaaatcaaaacaaaaatattttacagggggtgaattaaaataaaaatttt 20688851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 36354722 - 36354783
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaattt 344  Q
    ||||||||  || |||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  36354722 gcctattaaggaggtaaatcaaaacaaaaatattttacag-gggtgaatcaaaataaaaattt 36354783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 42119240 - 42119289
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  42119240 gtaaatcaaaacaaaaatattttacag-gggtgaatcaaaataaaaatttt 42119289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 24098538 - 24098489
Alignment:
Q  296 taaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  24098538 taaatcaaaacaaaattattttacagggggtgaatcaaaataaaaatttt 24098489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 26592429 - 26592378
Alignment:
Q  295 gtaaataaaaacaaaaatattttacaga-gggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||| ||| |||||||||||||||||||||||    
T  26592429 gtaaatcaaaacaaaaatattttatagatgggtgaatcaaaataaaaatttt 26592378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 20688981 - 20689030
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| ||||||||||||||| |||||||    
T  20688981 gtaaatcaaaacaaaaatattttacag-gggtgaatcaaaatagaaatttt 20689030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 21148903 - 21148853
Alignment:
Q  296 taaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  21148903 taaatcaaaacaaaaatattttacagcgggttgaatcaaaataaaaatttt 21148853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 33483064 - 33483126
Alignment:
Q  283 cctattagagacgtaaataaaaacaaaaatattttacagag-ggtgaatcaaaataaaaattt 344  Q
    |||||||| ||  ||||| |||||||||||||||||||||| ||||||||||||||| |||||    
T  33483064 cctattagggagataaatcaaaacaaaaatattttacagagaggtgaatcaaaataagaattt 33483126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 35798634 - 35798684
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||| |  ||||||||||||||||||||||    
T  35798634 gtaaatcaaaacaaaaatattttactggaggtgaatcaaaataaaaatttt 35798684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 39153562 - 39153620
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaa 340  Q
    ||||||||| |  |||||| |||||||||||||||||||| |||| |||||||||||||    
T  39153562 gcctattaggggagtaaatcaaaacaaaaatattttacagggggtaaatcaaaataaaa 39153620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 12382945 - 12382881
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagag-ggtgaatcaaaataaaaatttt 345  Q
    ||||||||| || |||||| |||||||||||||||||| | | | ||||||||||||||||||||    
T  12382945 gcctattagggaggtaaatcaaaacaaaaatattttaccgggagctgaatcaaaataaaaatttt 12382881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 21149038 - 21149102
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatc-aaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||||| |||| |||| ||||||||||||||    
T  21149038 gcctattaggggagtaaatcaaaacaaaaatattttacagggggtaaatcaaaaataaaaatttt 21149102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 36993039 - 36993007
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    |||||||||||||||||||||||||||||||||    
T  36993039 ggttaataggtctttaccctctgtaatataggt 36993007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 37204931 - 37204975
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaa 339  Q
    |||||| |||||||||||||||||||| |||| ||||||||||||    
T  37204931 gtaaatcaaaacaaaaatattttacagggggtaaatcaaaataaa 37204975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 144
Target Start/End: Complemental strand, 16305164 - 16305133
Alignment:
Q  113 gttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||||||||||||||||    
T  16305164 gttaataggtctttaccctctgtaatataggt 16305133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 24098622 - 24098664
Alignment:
Q  302 aaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  24098622 aaaacaaaaatattttacac-gggtgaatcaaaataaaaatttt 24098664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 33052923 - 33052872
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||||| ||||    
T  33052923 gtaaatcaaaacaaaaatattttacagggggttgaatcaaaataaaattttt 33052872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 345
Target Start/End: Complemental strand, 35798558 - 35798515
Alignment:
Q  302 aaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||||||||||||||  | ||||||||||||||||||||    
T  35798558 aaaacaaaaatattttacaggtgatgaatcaaaataaaaatttt 35798515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 40339437 - 40339386
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| ||| ||||||||||| ||||||||    
T  40339437 gtaaatcaaaacaaaaatattttacagggggttgaatcaaaatcaaaatttt 40339386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 345
Target Start/End: Original strand, 40339500 - 40339539
Alignment:
Q  307 aaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  40339500 aaaaatattttacagaggggtgaatcaaaataaaaatttt 40339539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 9227035 - 9227085
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||| |||||||| ||| |||||    
T  9227035 gtaaatcaaaacaaaaatattttacagggggtaaatcaaaaaaaatatttt 9227085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 11664178 - 11664129
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||||| | | ||||||||||||||||||    
T  11664178 gtaaatcaaaacaaaaatattttacaga-gataaatcaaaataaaaatttt 11664129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 143
Target Start/End: Complemental strand, 15061886 - 15061848
Alignment:
Q  105 aaaataaggttaataggtctttaccctctgtaatatagg 143  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  15061886 aaaatagggttaataggtctttaccccctgtaatatagg 15061848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 22551699 - 22551748
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||| |||||||||| |||| ||||||||||||||||||    
T  22551699 gtaaatcaaaacaaaa-tattttacagggggtaaatcaaaataaaaatttt 22551748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 24329467 - 24329513
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    |||||| ||||||||||||||||||| |  |||||||||||||||||    
T  24329467 gtaaatcaaaacaaaaatattttacaaatagtgaatcaaaataaaaa 24329513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 345
Target Start/End: Original strand, 35030873 - 35030919
Alignment:
Q  300 taaaaacaaaaatattttaca-gagggtgaatcaaaataaaaatttt 345  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||||    
T  35030873 taaaaacaaaaatattttacaggagattgaatcaaaataaaaatttt 35030919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 39418902 - 39418952
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||| ||||||| |||||||| ||| |||||    
T  39418902 gtaaatcaaaacaaaaatattttatagagggtaaatcaaaaaaaatatttt 39418952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 9226969 - 9226925
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggt 326  Q
    ||||||||| || |||||| |||||||||||||||||||| ||||    
T  9226969 gcctattagggaggtaaatcaaaacaaaaatattttacagggggt 9226925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 10976803 - 10976771
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  10976803 ggttaataggtctttaccccctgtaatataggt 10976771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 12330973 - 12330909
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttac-agagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||| ||||||| |||||||| ||| |||||    
T  12330973 gcctattaggggggtaaatcaaaacaaaaatattttacaagagggtaaatcaaaaaaaatatttt 12330909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 12383005 - 12383045
Alignment:
Q  305 acaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||||||||| | |||||||| ||||||||||||||    
T  12383005 acaaaaatattttacggggggtgaattaaaataaaaatttt 12383045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 12399642 - 12399610
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  12399642 ggttaataggtctttaccccctgtaatataggt 12399610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 343
Target Start/End: Original strand, 20698472 - 20698520
Alignment:
Q  296 taaataaaaacaaaaatattttacagagg-gtgaatcaaaataaaaatt 343  Q
    ||||| ||||||||||||||||| || || |||||||||||||||||||    
T  20698472 taaatcaaaacaaaaatattttataggggtgtgaatcaaaataaaaatt 20698520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 22551523 - 22551555
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  22551523 ggttaataggtctttaccccctgtaatataggt 22551555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 26034846 - 26034878
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||||||| |||||||||    
T  26034846 ggttaataggtctttaccctctgcaatataggt 26034878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 29104445 - 29104477
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  29104445 ggttaataggtctttaccccctgtaatataggt 29104477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 37205036 - 37205004
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    |||||||| ||||||||||||||||||||||||    
T  37205036 ggttaatatgtctttaccctctgtaatataggt 37205004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 38482319 - 38482351
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  38482319 ggttaataggtctttaccccctgtaatataggt 38482351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 38482422 - 38482374
Alignment:
Q  297 aaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||| |||| ||||||||||||||| || ||||||||||||||| ||||    
T  38482422 aaatcaaaataaaaatattttacaggggatgaatcaaaataaaattttt 38482374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 28834 - 28884
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  28834 gtaaattaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 28884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 28177 - 28127
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||||||||    
T  28177 gtaaatcaaaacaaaaatattttacagggggtgaatcaaagtaaaaatttt 28127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 91232 - 91282
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  91232 gtaaatcaaaataaaaatattttacagagggtgaatcaaaataaaaatttt 91282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 91051 - 91083
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  91051 ggttaataggtctttaccccctgtaatataggt 91083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 3885 - 3823
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||  || |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  3885 gcctattatggaggtaaatcaaaacaaaaatattttacag-gggtgaatcaaaataaaaatttt 3823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 3949 - 3998
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  3949 gtaaatcaaaacaaaaatattttacag-gggtgaatcaaaataaaattttt 3998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 3765 - 3702
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||||||||  |||||| ||||||||||||||||| || |||||||||||||||||| ||||    
T  3765 gcctattagaggggtaaatcaaaacaaaaatattttatagggggtgaatcaaaataaaattttt 3702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 4105219 - 4105281
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| || |||||| ||||||||||||||||| || |||||||||||||||||||||||    
T  4105219 gcctattag-gaggtaaatcaaaacaaaaatattttatagggggtgaatcaaaataaaaatttt 4105281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 7988961 - 7989024
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  7988961 gcctattaggggggtaaatcaaaacaaaaatattttacagggggtgaatcaaaataaaattttt 7989024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 8315923 - 8315984
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| || |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  8315923 gcctattag-gaggtaaatcaaaacaaaaatattttacag-gggtgaatcaaaataaaaatttt 8315984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 34985218 - 34985176
Alignment:
Q  303 aaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  34985218 aaacaaacatattttacagagggtgaatcaaaataaaaatttt 34985176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 27198326 - 27198375
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaattt 344  Q
    |||||| |||||||||||||||||||| |||||||| |||||||||||||    
T  27198326 gtaaatcaaaacaaaaatattttacagggggtgaataaaaataaaaattt 27198375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 25601833 - 25601769
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| ||||||||||||||||||| |||| ||||||||||||||||||||    
T  25601833 gcctattaggggggtaaatcaaaacaaaaatattttacaaagggttgaatcaaaataaaaatttt 25601769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 27198264 - 27198200
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaa-tattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||| |||||||||| |||||||||||||||||||||||    
T  27198264 gcctattaggggggtaaatcaaaacaaaaaatattttacagggggtgaatcaaaataaaaatttt 27198200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 960377 - 960326
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  960377 gtaaatcaaaacaaaaatattttacagggggttgaatcaaaataaaaatttt 960326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 302 - 345
Target Start/End: Complemental strand, 7988891 - 7988848
Alignment:
Q  302 aaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  7988891 aaaacaaaaatattttacagggggtaaatcaaaataaaaatttt 7988848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 29726223 - 29726160
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| ||| ||||||||||||||| ||||||||||||||||||| ||||    
T  29726223 gcctattaggggggtaaatcaaaccaaaaatattttacatagggtgaatcaaaataaaagtttt 29726160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 43121198 - 43121136
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  43121198 gcctattaggggagtaaatcaaaacaaaaatattttacag-gggtgaatcaaaataaaattttt 43121136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 4105154 - 4105105
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||| || |||||||||||||||||||||||    
T  4105154 gtaaatcaaaacaaaaatattttatag-gggtgaatcaaaataaaaatttt 4105105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 25601899 - 25601949
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||| |||||||||||| |||||    
T  25601899 gtaaatcaaaacaaaaatattttacagggggtaaatcaaaataaacatttt 25601949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 26447534 - 26447580
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    |||||| |||||||||||||||||||| || ||||||||||||||||    
T  26447534 gtaaatcaaaacaaaaatattttacaggggatgaatcaaaataaaaa 26447580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 34019075 - 34019125
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||  |||||||||||||||||| ||||    
T  34019075 gtaaatcaaaacaaaaatattttacaaggggtgaatcaaaataaaattttt 34019125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 8388236 - 8388175
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagaggg--tgaatcaaaataaaaa 341  Q
    |||||||||||  |||||| |||||||||||||||||||| |||  | ||||||||||||||    
T  8388236 gcctattagaggggtaaatcaaaacaaaaatattttacaggggggttaaatcaaaataaaaa 8388175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 12330439 - 12330389
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||| |||||||| ||| |||||    
T  12330439 gtaaatcaaaacaaaaatattttacagggggtaaatcaaaaaaaatatttt 12330389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 27987480 - 27987525
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    |||||| |||||||||||||||| ||| |||||||||||||||||||    
T  27987480 gtaaatcaaaacaaaaatattttgcag-gggtgaatcaaaataaaaa 27987525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 28044782 - 28044827
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    |||||| |||||||||||||||| ||| |||||||||||||||||||    
T  28044782 gtaaatcaaaacaaaaatattttgcag-gggtgaatcaaaataaaaa 28044827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 27164716 - 27164683
Alignment:
Q  110 aaggttaataggtctttaccctctgtaatatagg 143  Q
    ||||||||||||||||||||| ||||||||||||    
T  27164716 aaggttaataggtctttaccccctgtaatatagg 27164683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 43400958 - 43400925
Alignment:
Q  111 aggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||||||| ||||||||||    
T  43400958 aggttaataggtctttaccctctctaatataggt 43400925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 960553 - 960521
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  960553 ggttaataggtctttaccccctgtaatataggt 960521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 338
Target Start/End: Complemental strand, 2696707 - 2696666
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataa 338  Q
    |||||| ||||||||||||||||||  |||||||||||||||||    
T  2696707 gtaaatcaaaacaaaaatattttac--agggtgaatcaaaataa 2696666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 12330334 - 12330366
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  12330334 ggttaataggtctttaccccctgtaatataggt 12330366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 14329656 - 14329624
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  14329656 ggttaataggtctttaccccctgtaatataggt 14329624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 25277762 - 25277730
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  25277762 ggttaataggtctttaccccctgtaatataggt 25277730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 27543681 - 27543649
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  27543681 ggttaataggtctttaccccctgtaatataggt 27543649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 29309566 - 29309598
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  29309566 ggttaataggtctttaccccctgtaatataggt 29309598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 34985378 - 34985346
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  34985378 ggttaataggtctttaccccctgtaatataggt 34985346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 13279355 - 13279418
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  13279355 gcctattagggcggtaaatcaaaacaaaaatattttacagggggtgaattaaaataaaaatttt 13279418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 23314830 - 23314779
Alignment:
Q  295 gtaaataaaaacaaaaatattttacaga-gggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  23314830 gtaaatcaaaacaaaaatattttacagaggggtgaatcaaaataaaaatttt 23314779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 24204920 - 24204869
Alignment:
Q  295 gtaaataaaaacaaaaatattttacaga-gggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  24204920 gtaaatcaaaacaaaaatattttacagaggggtgaatcaaaataaaaatttt 24204869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 1693403 - 1693453
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| || ||||||||||||||||||||    
T  1693403 gtaaatcaaaacaaaaatattttacaggggatgaatcaaaataaaaatttt 1693453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 16902210 - 16902160
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||||||||| ||||||||| ||||||||    
T  16902210 gtaaatcaaaacaaaaatattttacagagggtaaatcaaaatcaaaatttt 16902160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 19979756 - 19979707
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  19979756 gtaaatcaaaacaaaaatattttacag-gggtgaatcaaaataaaaatttt 19979707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 38193080 - 38193022
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaa 340  Q
    |||||||||||  |||||| |||||||||||||||||||| |||| |||||||||||||    
T  38193080 gcctattagaggggtaaatcaaaacaaaaatattttacagggggtaaatcaaaataaaa 38193022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 38193145 - 38193195
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| || ||||||||||||||||||||    
T  38193145 gtaaatcaaaacaaaaatattttacaggggttgaatcaaaataaaaatttt 38193195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 19410630 - 19410566
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagg-gtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||||| || |||||||||||||||||||||    
T  19410630 gcctattaggggggtaaatcaaaacaaaaatattttacaggggagtgaatcaaaataaaaatttt 19410566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 31186788 - 31186724
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttaca-gagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  31186788 gcctattaggggggtaaatcaaaacaaaaatattttacaggggggtgaatcaaaataaaaatttt 31186724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 13279291 - 13279240
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  13279291 gtaaatcaaaacaaaaatattttacaggggggtgaatcaaaataaaaatttt 13279240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 19272337 - 19272274
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||| ||||||||| || ||||||||||||||||||||    
T  19272337 gcctattaggggggtaaattaaaacaaaaaaattttacaggggctgaatcaaaataaaaatttt 19272274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 5021731 - 5021781
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||||   |||||||||||||||||||||    
T  5021731 gtaaatcaaaacaaaaatattttacaggaagtgaatcaaaataaaaatttt 5021781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 19410703 - 19410753
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||| ||||||||||||| ||||    
T  19410703 gtaaatcaaaacaaaaatattttacagggggtaaatcaaaataaaagtttt 19410753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 23371631 - 23371681
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| || | ||||||||||||||||||    
T  23371631 gtaaatcaaaacaaaaatattttacaggggataaatcaaaataaaaatttt 23371681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 26930740 - 26930690
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| || |||||||| |||||||||||    
T  26930740 gtaaatcaaaacaaaaatattttacaggggttgaatcaacataaaaatttt 26930690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 39580119 - 39580164
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||    
T  39580119 gtaaatcaaaacaaaaatattttacag-gggtgaatcaaaataaaaa 39580164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 43251616 - 43251567
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  43251616 gtaaatcaaaacaaaaatattttacag-gggtgaatcaaaataaaattttt 43251567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 43251695 - 43251741
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaa 341  Q
    |||||| ||||||||||||||| |||| |||||||||||||||||||    
T  43251695 gtaaatcaaaacaaaaatatttaacagggggtgaatcaaaataaaaa 43251741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 44414031 - 44414080
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||| || |||||||||||||||||||||||    
T  44414031 gtaaatcaaaacaaaaatattttagag-gggtgaatcaaaataaaaatttt 44414080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 23784764 - 23784812
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaattt 344  Q
    |||||| |||||||||||||||||||| || |||||||||||||||||||    
T  23784764 gtaaatcaaaacaaaaatattttacag-ggatgaatcaaaataaaaattt 23784812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 24205289 - 24205350
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttaca-gagggtgaatcaaaataaaaat 342  Q
    ||||||||| |  |||||| ||||||||||||||||||| | ||||||||||||||||||||    
T  24205289 gcctattaggggggtaaatcaaaacaaaaatattttacaggggggtgaatcaaaataaaaat 24205350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 24206807 - 24206868
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttaca-gagggtgaatcaaaataaaaat 342  Q
    ||||||||| |  |||||| ||||||||||||||||||| | ||||||||||||||||||||    
T  24206807 gcctattaggggggtaaatcaaaacaaaaatattttacaggggggtgaatcaaaataaaaat 24206868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 39118982 - 39118933
Alignment:
Q  296 taaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||| ||||||||||||||||||||||  || |||||||||||||||||    
T  39118982 taaatcaaaacaaaaatattttacagagaatggatcaaaataaaaatttt 39118933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 1693337 - 1693277
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagg-gtgaatcaaaataaaaa 341  Q
    ||||||||| |  |||||| |||||||||||||||||||| || |||||||||||||||||    
T  1693337 gcctattaggggggtaaatcaaaacaaaaatattttacaggggtgtgaatcaaaataaaaa 1693277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 10688459 - 10688491
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    |||||||||||||||||||||||||||||||||    
T  10688459 ggttaataggtctttaccctctgtaatataggt 10688491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 10980652 - 10980620
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    |||||||||||||||||||||||||||||||||    
T  10980652 ggttaataggtctttaccctctgtaatataggt 10980620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 13882604 - 13882636
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    |||||||||||||||||||||||||||||||||    
T  13882604 ggttaataggtctttaccctctgtaatataggt 13882636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 31186669 - 31186701
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    |||||||||||||||||||||||||||||||||    
T  31186669 ggttaataggtctttaccctctgtaatataggt 31186701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 345
Target Start/End: Complemental strand, 35913149 - 35913105
Alignment:
Q  302 aaaacaaaaatattttaca-gagggtgaatcaaaataaaaatttt 345  Q
    ||||||||||||||||||| | |||||||||||||||||||||||    
T  35913149 aaaacaaaaatattttacaagggggtgaatcaaaataaaaatttt 35913105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 45164032 - 45163968
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttaca-gagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||| || | |||||||||||||||||||||||    
T  45164032 gcctattaggggggtaaatcaaaacaaaaatattttgcaagggggtgaatcaaaataaaaatttt 45163968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 16902288 - 16902339
Alignment:
Q  295 gtaaataaaaacaaaaatattttacag-agggtgaatcaaaataaaaatttt 345  Q
    |||||| ||| |||||||||||||||| ||| ||||||||||||||||||||    
T  16902288 gtaaatcaaagcaaaaatattttacaggaggttgaatcaaaataaaaatttt 16902339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 19272388 - 19272450
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||| |||||||||||| ||||| ||||||||||||||||||||    
T  19272388 gcctattaggggggtaaatcaaaataaaaatattttatagagg-tgaatcaaaataaaaatttt 19272450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 21298120 - 21298069
Alignment:
Q  295 gtaaataaaaacaaaaatattttacaga-gggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||| | |||||||||||||||||| ||||    
T  21298120 gtaaattaaaacaaaaatattttacaaaggggtgaatcaaaataaaattttt 21298069  T

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Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 31186855 - 31186906
Alignment:
Q  295 gtaaataaaaacaaaaatattttacaga-gggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||||||| ||||||  |||||||||||||||    
T  31186855 gtaaatcaaaacaaaaatattttacagaggggtgagccaaaataaaaatttt 31186906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 39119061 - 39119112
Alignment:
Q  295 gtaaataaaaacaaaa-atattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||| |||||||||||  ||||||||||||||||||||||    
T  39119061 gtaaatcaaaacaaaaaatattttacaggaggtgaatcaaaataaaaatttt 39119112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 112 - 143
Target Start/End: Original strand, 48168851 - 48168882
Alignment:
Q  112 ggttaataggtctttaccctctgtaatatagg 143  Q
    ||||||||||||||||||||||||||||||||    
T  48168851 ggttaataggtctttaccctctgtaatatagg 48168882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 23784688 - 23784639
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||  |||||||||||||||||| ||||    
T  23784688 gtaaattaaaacaaaaatattttaca-tgggtgaatcaaaataaaattttt 23784639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 1594180 - 1594148
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  1594180 ggttaataggtctttaccccctgtaatataggt 1594148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 3624142 - 3624186
Alignment:
Q  302 aaaacaaaaatattttaca-gagggtgaatcaaaataaaaatttt 345  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||    
T  3624142 aaaacaaaaatattttacaggagggtaaatcaaaacaaaaatttt 3624186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 6269529 - 6269561
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  6269529 ggttaataggtctttaccccctgtaatataggt 6269561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 9915652 - 9915684
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  9915652 ggttaataggtctttaccccctgtaatataggt 9915684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 9923564 - 9923596
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  9923564 ggttaataggtctttaccccctgtaatataggt 9923596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 13279473 - 13279441
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  13279473 ggttaataggtctttaccccctgtaatataggt 13279441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 13286802 - 13286866
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||||| ||| | |||| |||||||||||||    
T  13286802 gcctattaggggggtaaatcaaaacaaaaatattttacagggggttaaatcgaaataaaaatttt 13286866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 13797667 - 13797635
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  13797667 ggttaataggtctttaccccctgtaatataggt 13797635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 19272505 - 19272473
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  19272505 ggttaataggtctttaccccctgtaatataggt 19272473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 23371450 - 23371482
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  23371450 ggttaataggtctttaccccctgtaatataggt 23371482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 23784585 - 23784617
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  23784585 ggttaataggtctttaccccctgtaatataggt 23784617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 24555965 - 24555925
Alignment:
Q  104 taaaataaggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||| ||||||||||| ||||||| |||||||||||||    
T  24555965 taaaatagggttaataggtttttaccccctgtaatataggt 24555925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 26050363 - 26050407
Alignment:
Q  302 aaaacaaaaatattttacagagggt-gaatcaaaataaaaatttt 345  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||    
T  26050363 aaaacaaaagtattttacagggggttgaatcaaaataaaaatttt 26050407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 26059722 - 26059766
Alignment:
Q  302 aaaacaaaaatattttacagagggt-gaatcaaaataaaaatttt 345  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||    
T  26059722 aaaacaaaagtattttacagggggttgaatcaaaataaaaatttt 26059766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 26930823 - 26930867
Alignment:
Q  302 aaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||||    
T  26930823 aaaacaaatatattttacagcggggtgaatcaaaataaaaatttt 26930867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 38193250 - 38193218
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  38193250 ggttaataggtctttaccccctgtaatataggt 38193218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 39580222 - 39580190
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  39580222 ggttaataggtctttaccccctgtaatataggt 39580190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 48945185 - 48945217
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||| |||||||||||||||||||||    
T  48945185 ggttaataggtttttaccctctgtaatataggt 48945217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 38155 - 38105
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  38155 gtaaatcaaaacaaaaatattttacacggggtgaatcaaaataaaaatttt 38105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000008; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 1996 - 2060
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttac-agagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  1996 gcctattaggggggtaaatcaaaacaaaaatattttacaagagggtgaatcaaaataaaattttt 2060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 1934 - 1887
Alignment:
Q  295 gtaaataaaaacaaaaatattttac-agagggtgaatcaaaataaaaa 341  Q
    |||||| |||||||||||||||||| || |||||||||||||||||||    
T  1934 gtaaatcaaaacaaaaatattttacaagggggtgaatcaaaataaaaa 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 1828 - 1860
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  1828 ggttaataggtctttaccccctgtaatataggt 1860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 8033 - 8097
Alignment:
Q  282 gcctattagagacgtaaataaaaacaaaaatattttaca-gagggtgaatcaaaataaaaatttt 345  Q
    ||||||||| |  |||||| ||||||||||||||||||| || ||||||||||||||| ||||||    
T  8033 gcctattaggggggtaaatcaaaacaaaaatattttacaggatggtgaatcaaaataacaatttt 8097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 7967 - 7914
Alignment:
Q  295 gtaaataaaaacaaaaatatttta---cagagggtgaatcaaaataaaaatttt 345  Q
    |||||| |||||||||||||||||   ||| |||||||||||||||||||||||    
T  7967 gtaaatcaaaacaaaaatattttattacagggggtgaatcaaaataaaaatttt 7914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 8151 - 8119
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  8151 ggttaataggtctttacccactgtaatataggt 8119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 692 - 660
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    |||||||||||||||||||||||||||||||||    
T  692 ggttaataggtctttaccctctgtaatataggt 660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 834 - 869
Alignment:
Q  109 taaggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| ||||||||||||||||    
T  834 taaggttaataggtctttatcctctgtaatataggt 869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 4613 - 4664
Alignment:
Q  295 gtaaataaaaacaaaaatattttacagaggg-tgaatcaaaataaaaatttt 345  Q
    |||||| ||||||||||||||||| || ||| ||||||||||||||||||||    
T  4613 gtaaatcaaaacaaaaatattttatagggggttgaatcaaaataaaaatttt 4664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 4207 - 4175
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  4207 ggttaataggtctttaccccctgtaatataggt 4175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 4483 - 4451
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  4483 ggttaataggtctttaccccctgtaatataggt 4451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 34882 - 34850
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  34882 ggttaataggtctttaccccctgtaatataggt 34850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 26309 - 26341
Alignment:
Q  112 ggttaataggtctttaccctctgtaatataggt 144  Q
    ||||||||||||||||||| |||||||||||||    
T  26309 ggttaataggtctttaccccctgtaatataggt 26341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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