View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20630_low_5 (Length: 423)
Name: NF20630_low_5
Description: NF20630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20630_low_5 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 30)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 97 - 405
Target Start/End: Original strand, 26251652 - 26251960
Alignment:
| Q |
97 |
atgagaagttgcttgtcgatgttttgaaactaggggtcccagtaggagcaaaagaaaacaagttatggattaatattagtgaagaggaagtagtgagaag |
196 |
Q |
| |
|
||||||||||||| || ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
26251652 |
atgagaagttgctagttgatgttttgaagataggggtcccagtaggagcaaaagaaaataagttatggattaatattagtgaagaggaagtggtgagaag |
26251751 |
T |
|
| Q |
197 |
ggaagaaattgcaatggctgttaaggttttgatgggaagtagccaagagagcaaagaaatgaggatgagagcaaagaaacttggcgatgtagccaaaagg |
296 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
26251752 |
ggaagaaattgcaatggctgttaagattttgatgggaagttgccaagagagcaaagaaatgaggatgagagcaaagaaacttggcgatgcagccaaaagg |
26251851 |
T |
|
| Q |
297 |
acgatagaggaaggtggagattcttacaacaacttgattcagttgattgatgagctgaaatcattgaagaaatataaagcgcttggtgaaaatgcagatt |
396 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26251852 |
acgatagaggaaggtggagattcttacaacaacttgattcagttgattgatgagctgaaatcattgaagaaatataaagcgcttggtgaaaatgcagatt |
26251951 |
T |
|
| Q |
397 |
agacgattc |
405 |
Q |
| |
|
||||||||| |
|
|
| T |
26251952 |
agacgattc |
26251960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 97 - 411
Target Start/End: Original strand, 26243204 - 26243518
Alignment:
| Q |
97 |
atgagaagttgcttgtcgatgttttgaaactaggggtcccagtaggagcaaaagaaaacaagttatggattaatattagtgaagaggaagtagtgagaag |
196 |
Q |
| |
|
|||||||||||||||| |||||||| || |||||||||||| ||||||||||| ||||||||| ||||| || |||| | ||| ||| | |||||||| |
|
|
| T |
26243204 |
atgagaagttgcttgttgatgttttaaagataggggtcccagcaggagcaaaagtaaacaagttctggatgaacattacagtagatgaaatggtgagaag |
26243303 |
T |
|
| Q |
197 |
ggaagaaattgcaatggctgttaaggttttgatgggaagtagccaagagagcaaagaaatgaggatgagagcaaagaaacttggcgatgtagccaaaagg |
296 |
Q |
| |
|
|||||| ||| ||| ||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
26243304 |
ggaagagattacaaaggctgttgagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctgccaaaagg |
26243403 |
T |
|
| Q |
297 |
acgatagaggaaggtggagattcttacaacaacttgattcagttgattgatgagctgaaatcattgaagaaatataaagcgcttggtgaaaatgcagatt |
396 |
Q |
| |
|
|| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||| ||| || ||||||| |
|
|
| T |
26243404 |
actatagaggagggtggagattcttacaacaacttgattcagttgattgatgagctgaaatcgttgaagaaatctaaaacgcttgatgagaaagcagatt |
26243503 |
T |
|
| Q |
397 |
agacgattctgatga |
411 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
26243504 |
agacgattcagatga |
26243518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 99 - 399
Target Start/End: Original strand, 26179889 - 26180189
Alignment:
| Q |
99 |
gagaagttgcttgtcgatgttttgaaactaggggtcccagtaggagcaaaagaaaacaagttatggattaatattagtgaagaggaagtagtgagaaggg |
198 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| || |||| |||| |||||||| | |
|
|
| T |
26179889 |
gagaagttgcttgttgatgttttgaagataggggtcccagtaggagcaaaagaaaacaatttatggattaacattaatgtagagaaagtggtgagaagag |
26179988 |
T |
|
| Q |
199 |
aagaaattgcaatggctgttaaggttttgatgggaagtagccaagagagcaaagaaatgaggatgagagcaaagaaacttggcgatgtagccaaaaggac |
298 |
Q |
| |
|
|||| || | | |||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| |
|
|
| T |
26179989 |
aagatatagttaaggctgtaaagattttgatgggaagtgaccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgcttccaagaggac |
26180088 |
T |
|
| Q |
299 |
gatagaggaaggtggagattcttacaacaacttgattcagttgattgatgagctgaaatcattgaagaaatataaagcgcttggtgaaaatgcagattag |
398 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||||||| || ||||||||| |
|
|
| T |
26180089 |
tattgaggaaggtggagattcttacaacaacttgattcagttgattgatgagctgaaatcattaaagaaatctaaggcacttggtgtgaaagcagattag |
26180188 |
T |
|
| Q |
399 |
a |
399 |
Q |
| |
|
| |
|
|
| T |
26180189 |
a |
26180189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 97 - 376
Target Start/End: Original strand, 26278500 - 26278779
Alignment:
| Q |
97 |
atgagaagttgcttgtcgatgttttgaaactaggggtcccagtaggagcaaaagaaaacaagttatggattaatattagtgaagaggaagtagtgagaag |
196 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||| |||||||||| |||||||||||||| ||| ||||||| ||||||| | |||||||| |
|
|
| T |
26278500 |
atgagaagttgcttgttgatgttttgaagataggggtcccagttggagcaaaagtaaacaagttatggactaacattagtgtagaggaaatggtgagaag |
26278599 |
T |
|
| Q |
197 |
ggaagaaattgcaatggctgttaaggttttgatgggaagtagccaagagagcaaagaaatgaggatgagagcaaagaaacttggcgatgtagccaaaagg |
296 |
Q |
| |
|
|||||| || | | |||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||| |
|
|
| T |
26278600 |
ggaagagatagtgaaggctgtagagattttgatgggaattagccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctgccaagagg |
26278699 |
T |
|
| Q |
297 |
acgatagaggaaggtggagattcttacaacaacttgattcagttgattgatgagctgaaatcattgaagaaatataaagc |
376 |
Q |
| |
|
|| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26278700 |
actatagaggaaggtggacactcttacaacaacttgattcaattgattgatgagctgaaatcattgaagaaatctaaagc |
26278779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 97 - 376
Target Start/End: Original strand, 26298252 - 26298531
Alignment:
| Q |
97 |
atgagaagttgcttgtcgatgttttgaaactaggggtcccagtaggagcaaaagaaaacaagttatggattaatattagtgaagaggaagtagtgagaag |
196 |
Q |
| |
|
|||||||||||||||| |||||||| || ||||||||||||| |||||||||||||||||||||||| || | ||||||| |||| |||| |||||||| |
|
|
| T |
26298252 |
atgagaagttgcttgttgatgttttaaagataggggtcccagtcggagcaaaagaaaacaagttatggcttgacattagtgtagagaaagtggtgagaag |
26298351 |
T |
|
| Q |
197 |
ggaagaaattgcaatggctgttaaggttttgatgggaagtagccaagagagcaaagaaatgaggatgagagcaaagaaacttggcgatgtagccaaaagg |
296 |
Q |
| |
|
|||||| || | | | |||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| | ||||| ||| |
|
|
| T |
26298352 |
ggaagagatagagaagactgtgaagattttgatgggaagcggccaagagagcaaagaaatgaggatgagagcaaagaaacttagcgaggctgccaagagg |
26298451 |
T |
|
| Q |
297 |
acgatagaggaaggtggagattcttacaacaacttgattcagttgattgatgagctgaaatcattgaagaaatataaagc |
376 |
Q |
| |
|
|| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26298452 |
actatagaagaaggtggagattcttacaacaacttgattcaattgattgatgagctgaaatcattgaagaaatctaaagc |
26298531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 97 - 385
Target Start/End: Original strand, 26192069 - 26192357
Alignment:
| Q |
97 |
atgagaagttgcttgtcgatgttttgaaactaggggtcccagtaggagcaaaagaaaacaagttatggattaatattagtgaagaggaagtagtgagaag |
196 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||| ||| ||||||||||||||||||| |||| || |||| ||| ||||| | || ||||| |
|
|
| T |
26192069 |
atgagaagttgcttgttgatgttttgaagataggggtccgagttggagcaaaagaaaacaagtcatgggatagtatttgtgtagaggcgatggttagaag |
26192168 |
T |
|
| Q |
197 |
ggaagaaattgcaatggctgttaaggttttgatgggaagtagccaagagagcaaagaaatgaggatgagagcaaagaaacttggcgatgtagccaaaagg |
296 |
Q |
| |
|
|||||| ||||||| ||||||| || |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| |
|
|
| T |
26192169 |
ggaagagattgcaaaggctgttgagattttgatgggaagtggacaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgcttccaagagg |
26192268 |
T |
|
| Q |
297 |
acgatagaggaaggtggagattcttacaacaacttgattcagttgattgatgagctgaaatcattgaagaaatataaagcgcttggtga |
385 |
Q |
| |
|
|| ||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||| ||||||||| |||||| |||||||| |
|
|
| T |
26192269 |
actatagaggaaggtggacattcatacaacaacttgattcagttcattgatgagctgaaatcactgaagaaatctaaagcacttggtga |
26192357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 97 - 374
Target Start/End: Original strand, 26155992 - 26156272
Alignment:
| Q |
97 |
atgagaagttgcttgtcgatgttttgaaactaggggtcccagtaggagcaaaagaaaacaagttatggattaa---tattagtgaagaggaagtagtgag |
193 |
Q |
| |
|
|||| ||||||||||| ||||||||||| ||| ||||||||| |||||||||||||| |||||||||| || || ||||||||| | ||| |||| |
|
|
| T |
26155992 |
atgaaaagttgcttgttgatgttttgaagatagcggtcccagttggagcaaaagaaaataagttatggactagcactagtagtgaagacgtagtggtgaa |
26156091 |
T |
|
| Q |
194 |
aagggaagaaattgcaatggctgttaaggttttgatgggaagtagccaagagagcaaagaaatgaggatgagagcaaagaaacttggcgatgtagccaaa |
293 |
Q |
| |
|
|||||||| || || | |||||| || |||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||| |||| ||||| |
|
|
| T |
26156092 |
gagggaagagatagcgaaggctgtagagattttgatgggaagtgaccaagagagcaaagcaatgagggtgagagcaaagaaacttggtgatgctgccaag |
26156191 |
T |
|
| Q |
294 |
aggacgatagaggaaggtggagattcttacaacaacttgattcagttgattgatgagctgaaatcattgaagaaatataaa |
374 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
26156192 |
aggactatagaagaaggtggagattcttacaacaacttgattcagttgattgatgatctgaaatcattgaagaaatctaaa |
26156272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 97 - 399
Target Start/End: Original strand, 26129371 - 26129676
Alignment:
| Q |
97 |
atgagaagttgcttgtcgatgttttgaaactaggggtcccagtaggagcaaaagaaaacaagttatggattaatatt---agtgaagaggaagtagtgag |
193 |
Q |
| |
|
|||| |||||||| || ||||||||||| ||||||| ||||||||||||||||||||||| | ||| || | | ||| |||| | ||| |||| |
|
|
| T |
26129371 |
atgaaaagttgctcgttgatgttttgaagataggggtttcagtaggagcaaaagaaaacaagatgcggactagcactgaaagtaaagacgtagtggtgaa |
26129470 |
T |
|
| Q |
194 |
aagggaagaaattgcaatggctgttaaggttttgatgggaagtagccaagagagcaaagaaatgaggatgagagcaaagaaacttggcgatgtagccaaa |
293 |
Q |
| |
|
||||||||| || || | |||||| || ||||||||||||| |||||||||||||||||||||||||||||||||| || ||||| || | ||||| |
|
|
| T |
26129471 |
aagggaagagatagcgaaggctgtagagattttgatgggaagcggccaagagagcaaagaaatgaggatgagagcaaaaaagcttggtgaggctgccaag |
26129570 |
T |
|
| Q |
294 |
aggacgatagaggaaggtggagattcttacaacaacttgattcagttgattgatgagctgaaatcattgaagaaatataaagcgcttggtgaaaatgcag |
393 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| || |||| |
|
|
| T |
26129571 |
aggactattgaggaaggtggagattcttacaacaacttgattcaattgattgatgagctgaaatcattgaagaaatctaaagcacttggtgagaaagcag |
26129670 |
T |
|
| Q |
394 |
attaga |
399 |
Q |
| |
|
|||||| |
|
|
| T |
26129671 |
attaga |
26129676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 97 - 399
Target Start/End: Complemental strand, 19102890 - 19102588
Alignment:
| Q |
97 |
atgagaagttgcttgtcgatgttttgaaactaggggtcccagtaggagcaaaagaaaacaagttatggattaatattagtgaagaggaagtagtgagaag |
196 |
Q |
| |
|
|||| |||||||| |||||||||||||| |||||||| |||||||||||||| |||||||||||||| || |||||||| | ||| |||| ||| |
|
|
| T |
19102890 |
atgaaaagttgctcgtcgatgttttgaagataggggtcggagtaggagcaaaagtaaacaagttatggaatagccctagtgaagggatagtggtgaaaag |
19102791 |
T |
|
| Q |
197 |
ggaagaaattgcaatggctgttaaggttttgatgggaagtagccaagagagcaaagaaatgaggatgagagcaaagaaacttggcgatgtagccaaaagg |
296 |
Q |
| |
|
|| ||| || | | |||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| || || ||| |
|
|
| T |
19102790 |
gggagagatagtgaaggctgtggagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaagcttggtgatgctgcaaagagg |
19102691 |
T |
|
| Q |
297 |
acgatagaggaaggtggagattcttacaacaacttgattcagttgattgatgagctgaaatcattgaagaaatataaagcgcttggtgaaaatgcagatt |
396 |
Q |
| |
|
|| |||||||| |||||| | ||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | |||||||| || ||||||| |
|
|
| T |
19102690 |
actatagaggagggtggacactctcacaacaacttgattctgttgattgatgagctgaaatcattgaagaaatctaagtcacttggtgagaaagcagatt |
19102591 |
T |
|
| Q |
397 |
aga |
399 |
Q |
| |
|
||| |
|
|
| T |
19102590 |
aga |
19102588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 223 - 399
Target Start/End: Original strand, 26121245 - 26121421
Alignment:
| Q |
223 |
ttttgatgggaagtagccaagagagcaaagaaatgaggatgagagcaaagaaacttggcgatgtagccaaaaggacgatagaggaaggtggagattctta |
322 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || | ||||| |||| ||||||||| ||||| ||||||| |
|
|
| T |
26121245 |
ttttaatgggaagtggccaagagagcaaagaaatgatgatgagagcaaagaaacttggtgaggctgccaagaggattatagaggaacgtggacattctta |
26121344 |
T |
|
| Q |
323 |
caacaacttgattcagttgattgatgagctgaaatcattgaagaaatataaagcgcttggtgaaaatgcagattaga |
399 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || |||||||||| |
|
|
| T |
26121345 |
caacaacttgattcagttgattgatgagctgaaatcattgaagaaatctaaagcacttggtgagaaagcagattaga |
26121421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 97 - 366
Target Start/End: Original strand, 26204689 - 26204958
Alignment:
| Q |
97 |
atgagaagttgcttgtcgatgttttgaaactaggggtcccagtaggagcaaaagaaaacaagttatggattaatattagtgaagaggaagtagtgagaag |
196 |
Q |
| |
|
|||||||| ||||||| ||||||||||| | || ||| | || ||| |||||| ||| |||| ||| ||| ||| ||||||||| ||| |||||||| |
|
|
| T |
26204689 |
atgagaagctgcttgttgatgttttgaagattggagtcgcggttggatcaaaagtgaaccagttttggcttagcattggtgaagaggtagtggtgagaag |
26204788 |
T |
|
| Q |
197 |
ggaagaaattgcaatggctgttaaggttttgatgggaagtagccaagagagcaaagaaatgaggatgagagcaaagaaacttggcgatgtagccaaaagg |
296 |
Q |
| |
|
||| || || | | ||||||| || | |||||||||| | |||||| |||||||||||||||||||||||||||||| ||||| |||| ||||| | | |
|
|
| T |
26204789 |
ggaggagatagtgaaggctgttgagatattgatgggaaatggccaagtgagcaaagaaatgaggatgagagcaaagaagcttggtgatgctgccaagaag |
26204888 |
T |
|
| Q |
297 |
acgatagaggaaggtggagattcttacaacaacttgattcagttgattgatgagctgaaatcattgaaga |
366 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
26204889 |
actatagaggaaggtggagattcttacaacaacttgattcagttgattgatgagctaaaatcattgaaga |
26204958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 97 - 366
Target Start/End: Original strand, 26224326 - 26224595
Alignment:
| Q |
97 |
atgagaagttgcttgtcgatgttttgaaactaggggtcccagtaggagcaaaagaaaacaagttatggattaatattagtgaagaggaagtagtgagaag |
196 |
Q |
| |
|
|||||||| ||||||| ||||||||||| | || ||| | || ||| |||||| ||| |||| ||| ||| ||| ||||||||| ||| |||||||| |
|
|
| T |
26224326 |
atgagaagctgcttgttgatgttttgaagattggagtcgcggttggatcaaaagtgaaccagttttggcttagcattggtgaagaggtagtggtgagaag |
26224425 |
T |
|
| Q |
197 |
ggaagaaattgcaatggctgttaaggttttgatgggaagtagccaagagagcaaagaaatgaggatgagagcaaagaaacttggcgatgtagccaaaagg |
296 |
Q |
| |
|
||| || || | | ||||||| || | |||||||||||| | |||||| | |||| |||||||||||||||||||| ||||| |||| || || | | |
|
|
| T |
26224426 |
ggaggagatagtgaaggctgttgagatattgatgggaagtggtcaagagggaaaagtgatgaggatgagagcaaagaagcttggtgatgctgcaaagaag |
26224525 |
T |
|
| Q |
297 |
acgatagaggaaggtggagattcttacaacaacttgattcagttgattgatgagctgaaatcattgaaga |
366 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
26224526 |
actatagaggaaggtggagattcttacaacaacttgattcaattgattgatgagctaaaatcattgaaga |
26224595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 26187052 - 26187209
Alignment:
| Q |
97 |
atgagaagttgcttgtcgatgttttgaaactaggggtcccagtaggagcaaaagaaaacaagttatggattaatattagtgaagaggaagtagtgagaag |
196 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| | |||||| ||||||| ||| ||| | |||||||| |
|
|
| T |
26187052 |
atgagaagttgcttgttgatgttttgaagataggggtccaagtaggagcaaaagaaaacaagttctagattaacattagtgtagatgaaatggtgagaag |
26187151 |
T |
|
| Q |
197 |
ggaagaaattgcaatggctgttaaggttttgatgggaagtagccaagagagcaaagaa |
254 |
Q |
| |
|
|||||| || | | |||||| ||| |||||||||||||| |||||||||| |||||| |
|
|
| T |
26187152 |
ggaagagatagttaaggctgtgaagattttgatgggaagtggccaagagagaaaagaa |
26187209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 26251173 - 26251251
Alignment:
| Q |
21 |
aatcaaatcatggagtgtcggaccagtttcagcctgggcaaacaaggatgatgaaagaaaggcgaataggggacacatg |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26251173 |
aatcaaatcatggagtgtcggaccagtttctgcctgggctaacaaggatgatgaaagaaaggcgaataggggacacatg |
26251251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 26242725 - 26242801
Alignment:
| Q |
21 |
aatcaaatcatggagtgtcggaccagtttcagcctgggcaaacaaggatgatgaaagaaaggcgaataggggacaca |
97 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
26242725 |
aatcaaatcatggagtgtcggaccagtttcagcctgggctaacaaggatgataaaagaaaggcgaataggggacaca |
26242801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 26297773 - 26297850
Alignment:
| Q |
21 |
aatcaaatcatggagtgtcggaccagtttcagcctgggcaaacaaggatgatgaaagaaaggcgaataggggacacat |
98 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
26297773 |
aatcaagtcatggagtgtcggaccagtttcagcctgggctaacaaggatgatgaaagaaaggctaataggggacacat |
26297850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 261
Target Start/End: Original strand, 26302615 - 26302777
Alignment:
| Q |
99 |
gagaagttgcttgtcgatgttttgaaactaggggtcccagtaggagcaaaagaaaacaagttatggattaatattagtgaagaggaagtagtgagaaggg |
198 |
Q |
| |
|
|||||||| ||||| ||||||||||| | || || | || ||| ||||||| ||| |||| |||| || ||||||| ||||| | | |||||||||| |
|
|
| T |
26302615 |
gagaagtttcttgttgatgttttgaagattggagtttctgttggatcaaaagagaacgagttttggaatagaattagtgtagaggcaattgtgagaaggg |
26302714 |
T |
|
| Q |
199 |
aagaaattgcaatggctgttaaggttttgatgggaagtagccaagagagcaaagaaatgagga |
261 |
Q |
| |
|
|||| ||||||| ||| ||| || |||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
26302715 |
aagagattgcaaaggccgttgagattttgatgggaaatggccaagagagcaaagaaatgagga |
26302777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 26128896 - 26128972
Alignment:
| Q |
22 |
atcaaatcatggagtgtcggaccagtttcagcctgggcaaacaaggatgatgaaagaaaggcgaataggggacacat |
98 |
Q |
| |
|
|||||||| |||||||| |||||||||||| | ||||| |||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
26128896 |
atcaaatcttggagtgtaggaccagtttcatcatgggctaacaaggatgatgaaaacaaggggaataggggacacat |
26128972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 26186571 - 26186648
Alignment:
| Q |
22 |
atcaaatcatggagtgtcggaccagtttcagcctgggcaaacaaggatgatgaaagaaaggcgaataggggacacatg |
99 |
Q |
| |
|
||||||||||||||||| |||||||||||| | | ||| |||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
26186571 |
atcaaatcatggagtgtaggaccagtttcatcattggctaacaaggatgatgaaaagaagggtaataggggacacatg |
26186648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 26088111 - 26088187
Alignment:
| Q |
22 |
atcaaatcatggagtgtcggaccagtttcagcctgggcaaacaaggatgatgaaagaaaggcgaataggggacacat |
98 |
Q |
| |
|
|||||||| |||||||| || ||||||||||| ||| | |||||| ||||||||| |||||| |||||||||||||| |
|
|
| T |
26088111 |
atcaaatcttggagtgtagggccagtttcagcttggaccaacaagaatgatgaaaaaaaggccaataggggacacat |
26088187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 26111899 - 26111975
Alignment:
| Q |
22 |
atcaaatcatggagtgtcggaccagtttcagcctgggcaaacaaggatgatgaaagaaaggcgaataggggacacat |
98 |
Q |
| |
|
|||||||| |||||||| || ||||||||||| ||| | |||||| ||||||||| |||||| |||||||||||||| |
|
|
| T |
26111899 |
atcaaatcttggagtgtagggccagtttcagcttggaccaacaagaatgatgaaaaaaaggccaataggggacacat |
26111975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 26088586 - 26088654
Alignment:
| Q |
97 |
atgagaagttgcttgtcgatgttttgaaactaggggtcccagtaggagcaaaagaaaacaagttatgga |
165 |
Q |
| |
|
|||| ||||||||||| ||||||||||| ||||||||||||| |||||||||| |||| |||| |||| |
|
|
| T |
26088586 |
atgaaaagttgcttgttgatgttttgaagataggggtcccagttggagcaaaagtaaacgagttctgga |
26088654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 26112374 - 26112442
Alignment:
| Q |
97 |
atgagaagttgcttgtcgatgttttgaaactaggggtcccagtaggagcaaaagaaaacaagttatgga |
165 |
Q |
| |
|
|||| ||||||||||| ||||||||||| ||||||||||||| |||||||||| |||| |||| |||| |
|
|
| T |
26112374 |
atgaaaagttgcttgttgatgttttgaagataggggtcccagttggagcaaaagtaaacgagttctgga |
26112442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 26179412 - 26179488
Alignment:
| Q |
22 |
atcaaatcatggagtgtcggaccagtttcagcctgggcaaacaaggatgatgaaagaaaggcgaataggggacacat |
98 |
Q |
| |
|
|||||| | |||||||| |||||||||||||| ||| | |||||||||| ||||| |||||| || ||||||||||| |
|
|
| T |
26179412 |
atcaaaacttggagtgtaggaccagtttcagcttggactaacaaggatggtgaaaaaaaggccaaaaggggacacat |
26179488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 19103365 - 19103295
Alignment:
| Q |
22 |
atcaaatcatggagtgtcggaccagtttcagcctgggcaaacaaggatgatgaaagaaaggcgaatagggg |
92 |
Q |
| |
|
|||||||| ||| |||| |||||||||||||| |||| |||||||||||||||| |||||| | |||||| |
|
|
| T |
19103365 |
atcaaatcttggtgtgtaggaccagtttcagctagggctaacaaggatgatgaaaaaaaggccagtagggg |
19103295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 26191594 - 26191648
Alignment:
| Q |
22 |
atcaaatcatggagtgtcggaccagtttcagcctgggcaaacaaggatgatgaaa |
76 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| ||||| || ||||||||||||| |
|
|
| T |
26191594 |
atcaaatcttggagtgtaggaccagtttcagcttgggctaaaaaggatgatgaaa |
26191648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 280
Target Start/End: Original strand, 26208316 - 26208404
Alignment:
| Q |
192 |
agaagggaagaaattgcaatggctgttaaggttttgatgggaagtagccaagagagcaaagaaatgaggatgagagcaaagaaacttgg |
280 |
Q |
| |
|
||||||||||| ||||||| ||||||| || |||||||||||||| ||||||||| || |||||||| ||| | ||| |||||||| |
|
|
| T |
26208316 |
agaagggaagagattgcaaaggctgttgagattttgatgggaagtgaagaagagagcatagcaatgaggaggagggtaaaaaaacttgg |
26208404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 366
Target Start/End: Original strand, 26260830 - 26260945
Alignment:
| Q |
251 |
agaaatgaggatgagagcaaagaaacttggcgatgtagccaaaaggacgatagaggaaggtggagattcttacaacaacttgattcagttgattgatgag |
350 |
Q |
| |
|
||||||||||| |||||||| |||||| | |||| ||| || | || |||||||| |||||| ||||||||||| ||||| || || || |||||| |
|
|
| T |
26260830 |
agaaatgaggaggagagcaagaaaactttgtgatgcagctaagaagagcatagaggagggtggaacctcttacaacaatttgatgcaatttatagatgag |
26260929 |
T |
|
| Q |
351 |
ctgaaatcattgaaga |
366 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
26260930 |
cttaaatcattgaaga |
26260945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 26155532 - 26155586
Alignment:
| Q |
22 |
atcaaatcatggagtgtcggaccagtttcagcctgggcaaacaaggatgatgaaa |
76 |
Q |
| |
|
|||||| | |||||||| |||||||||||| | ||||| |||||||||||||||| |
|
|
| T |
26155532 |
atcaaaacttggagtgtaggaccagtttcatcatgggctaacaaggatgatgaaa |
26155586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 261
Target Start/End: Original strand, 26227872 - 26227940
Alignment:
| Q |
193 |
gaagggaagaaattgcaatggctgttaaggttttgatgggaagtagccaagagagcaaagaaatgagga |
261 |
Q |
| |
|
|||||||||| ||||||| ||||||| || |||||||||||||| ||||||||| || |||||||| |
|
|
| T |
26227872 |
gaagggaagagattgcaaaggctgttgagattttgatgggaagtgaagaagagagcatagcaatgagga |
26227940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 131; Significance: 8e-68; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 97 - 399
Target Start/End: Original strand, 44904057 - 44904359
Alignment:
| Q |
97 |
atgagaagttgcttgtcgatgttttgaaactaggggtcccagtaggagcaaaagaaaacaagttatggattaatattagtgaagaggaagtagtgagaag |
196 |
Q |
| |
|
|||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||| || ||| || ||||| | | || ||||| |
|
|
| T |
44904057 |
atgagaggttgcttgttgatgttttgaagataggggtcccagttggagcaaaagaaaacaagttatggaatagctttactgtagaggcaatggttagaag |
44904156 |
T |
|
| Q |
197 |
ggaagaaattgcaatggctgttaaggttttgatgggaagtagccaagagagcaaagaaatgaggatgagagcaaagaaacttggcgatgtagccaaaagg |
296 |
Q |
| |
|
|||||| ||||||| ||||| || ||||| |||||| | | ||||| |||||||||||||||| ||||||||| || ||||||||| ||||| ||| |
|
|
| T |
44904157 |
ggaagagattgcaaaggctgcggagattttgttgggaaatggtcaagacagcaaagaaatgaggacgagagcaaaaaagtttggcgatgctgccaagagg |
44904256 |
T |
|
| Q |
297 |
acgatagaggaaggtggagattcttacaacaacttgattcagttgattgatgagctgaaatcattgaagaaatataaagcgcttggtgaaaatgcagatt |
396 |
Q |
| |
|
|| ||||||||||||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||| |||||||| || ||||||| |
|
|
| T |
44904257 |
actatagaggaaggtggacactcttacaacaacttggttcagttgatagatgagctgaaatcattgaagaaatccaaagcacttggtgagaaagcagatt |
44904356 |
T |
|
| Q |
397 |
aga |
399 |
Q |
| |
|
||| |
|
|
| T |
44904357 |
aga |
44904359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 44903588 - 44903653
Alignment:
| Q |
31 |
tggagtgtcggaccagtttcagcctgggcaaacaaggatgatgaaagaaaggcgaataggggacac |
96 |
Q |
| |
|
|||||||| |||||||||||| | ||||| ||||||| ||||||| | |||| |||||||||||| |
|
|
| T |
44903588 |
tggagtgtaggaccagtttcaacttgggctaacaagggtgatgaacggaagggcaataggggacac |
44903653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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