View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20630_low_6 (Length: 419)
Name: NF20630_low_6
Description: NF20630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20630_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 379; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 11 - 401
Target Start/End: Original strand, 45308779 - 45309169
Alignment:
| Q |
11 |
cacagatagaaataaaagattgtaacatactaagatatatataatgaaaactaaaacattgctagtctcgtcctttttcctcatcttgattattaatatt |
110 |
Q |
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| T |
45308779 |
cacagatagaaataatagtttgtaacatactaagatatatataatgaaaactaaaacattgctagtctcgtcctttttcctcatcttgattattaatatt |
45308878 |
T |
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| Q |
111 |
acttttggtattgtccacagtgataatttcaatgagtttagaatccctaataaggttgtcaagtccttatgcaaagacactgatgaccataaactttgcc |
210 |
Q |
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| T |
45308879 |
acttttggtattgtccacagtgataatttcaatgagtttagaatccctaataaggttgtcaagtccttatgcaaagacactgatgaccataaactttgcc |
45308978 |
T |
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| Q |
211 |
atgatgtcctctaccccgtgaaaacctcaaacccaatagattatattgatgttgtggtgaagaacttgatggaaagcgtagaaaacgcatttaatgacat |
310 |
Q |
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| T |
45308979 |
atgatgtcctctaccccgtgaaaacctcaaacccaatagattatattgatgttgtggtgaagaacttgatggaaagcgtagaaaacgcatttaatgacat |
45309078 |
T |
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| Q |
311 |
gagtaataaacttagttctatggagaataatgaaagcaacaatttaggtatcaagatggccctcgaggactgcaaggacatgttacagttc |
401 |
Q |
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| T |
45309079 |
gagtaataaacttagttctatggagaataatgaaagcaacaatttaggtatcaagatggcccttgaggactgcaaggacatgttacagttc |
45309169 |
T |
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