View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20633_high_10 (Length: 672)

Name: NF20633_high_10
Description: NF20633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20633_high_10
NF20633_high_10
[»] chr8 (40 HSPs)
chr8 (234-385)||(11718336-11718487)
chr8 (15-195)||(11718543-11718722)
chr8 (513-575)||(20694417-20694479)
chr8 (513-566)||(12328782-12328835)
chr8 (511-575)||(6649151-6649215)
chr8 (511-577)||(6590861-6590927)
chr8 (514-572)||(9503623-9503681)
chr8 (431-487)||(1156998-1157054)
chr8 (511-571)||(1784091-1784151)
chr8 (518-566)||(14110167-14110215)
chr8 (513-560)||(28205811-28205858)
chr8 (513-575)||(40737902-40737964)
chr8 (514-575)||(14113294-14113355)
chr8 (514-579)||(24822808-24822873)
chr8 (515-563)||(10839777-10839825)
chr8 (431-487)||(40223312-40223368)
chr8 (514-553)||(158447-158486)
chr8 (508-571)||(4101994-4102057)
chr8 (514-573)||(10184636-10184695)
chr8 (509-544)||(11322591-11322626)
chr8 (513-560)||(27976806-27976853)
chr8 (513-560)||(28034075-28034122)
chr8 (513-560)||(43140559-43140606)
chr8 (513-543)||(1157034-1157064)
chr8 (513-575)||(1223125-1223187)
chr8 (514-560)||(6197907-6197953)
chr8 (513-575)||(6616590-6616652)
chr8 (513-575)||(20694499-20694561)
chr8 (512-542)||(42158460-42158490)
chr8 (513-562)||(1784169-1784218)
chr8 (514-563)||(7693118-7693167)
chr8 (513-542)||(13325126-13325155)
chr8 (513-562)||(14578514-14578563)
chr8 (444-481)||(14578598-14578635)
chr8 (514-563)||(34711095-34711144)
chr8 (514-578)||(429847-429911)
chr8 (444-480)||(1784186-1784222)
chr8 (513-581)||(6590775-6590843)
chr8 (519-571)||(40223308-40223360)
chr8 (513-549)||(43932133-43932169)
[»] chr1 (34 HSPs)
chr1 (511-575)||(5368852-5368916)
chr1 (513-579)||(35489191-35489257)
chr1 (513-566)||(11900908-11900961)
chr1 (431-487)||(1609958-1610014)
chr1 (513-571)||(1609966-1610024)
chr1 (513-581)||(49166688-49166756)
chr1 (513-560)||(26468307-26468354)
chr1 (512-562)||(5346973-5347023)
chr1 (432-582)||(24419524-24419678)
chr1 (513-571)||(24419613-24419671)
chr1 (513-559)||(37247586-37247632)
chr1 (434-487)||(34890183-34890236)
chr1 (513-545)||(25395946-25395978)
chr1 (512-560)||(30800192-30800240)
chr1 (509-573)||(5700032-5700098)
chr1 (513-560)||(14773803-14773850)
chr1 (513-560)||(30800289-30800336)
chr1 (428-487)||(31032532-31032591)
chr1 (512-542)||(897090-897120)
chr1 (517-575)||(35489281-35489339)
chr1 (513-563)||(49944847-49944897)
chr1 (430-471)||(5368768-5368809)
chr1 (430-471)||(8174201-8174242)
chr1 (511-572)||(15497483-15497544)
chr1 (514-575)||(47911848-47911909)
chr1 (514-575)||(47911930-47911991)
chr1 (430-487)||(49166698-49166755)
chr1 (431-487)||(1610040-1610095)
chr1 (513-581)||(8174175-8174243)
chr1 (513-545)||(8900822-8900854)
chr1 (514-562)||(11016670-11016718)
chr1 (430-487)||(25395915-25395968)
chr1 (515-563)||(34662696-34662744)
chr1 (439-487)||(35489199-35489247)
[»] chr6 (20 HSPs)
chr6 (511-575)||(7632848-7632912)
chr6 (513-566)||(24252961-24253014)
chr6 (511-575)||(5069938-5070002)
chr6 (523-580)||(862815-862872)
chr6 (432-487)||(5069935-5069990)
chr6 (513-560)||(33123024-33123071)
chr6 (513-581)||(14589535-14589603)
chr6 (513-560)||(26388204-26388251)
chr6 (513-544)||(29938695-29938726)
chr6 (513-575)||(862902-862963)
chr6 (513-563)||(3064897-3064947)
chr6 (514-547)||(1158275-1158308)
chr6 (514-571)||(2271206-2271263)
chr6 (432-481)||(2271221-2271270)
chr6 (514-563)||(7257415-7257464)
chr6 (529-581)||(3633706-3633758)
chr6 (429-461)||(7055674-7055706)
chr6 (514-562)||(8050989-8051037)
chr6 (431-487)||(16121055-16121111)
chr6 (523-575)||(29400665-29400717)
[»] chr2 (43 HSPs)
chr2 (509-581)||(41517440-41517512)
chr2 (513-573)||(14725211-14725271)
chr2 (509-559)||(14725287-14725337)
chr2 (509-578)||(27279482-27279551)
chr2 (515-575)||(11564999-11565059)
chr2 (513-572)||(20555263-20555322)
chr2 (513-571)||(29168580-29168638)
chr2 (513-575)||(42698148-42698210)
chr2 (511-575)||(9733544-9733608)
chr2 (513-575)||(7943523-7943586)
chr2 (444-487)||(9895641-9895684)
chr2 (513-560)||(10495724-10495771)
chr2 (508-563)||(11030271-11030326)
chr2 (432-487)||(11564996-11565051)
chr2 (433-471)||(1220880-1220918)
chr2 (514-572)||(5109368-5109426)
chr2 (513-575)||(30429067-30429129)
chr2 (432-486)||(33853920-33853974)
chr2 (513-563)||(36881547-36881597)
chr2 (518-560)||(43100762-43100804)
chr2 (515-573)||(45571034-45571092)
chr2 (515-573)||(45574701-45574759)
chr2 (515-573)||(45578368-45578426)
chr2 (515-573)||(45582035-45582093)
chr2 (515-573)||(45585702-45585760)
chr2 (515-573)||(45589369-45589427)
chr2 (515-573)||(45593036-45593094)
chr2 (515-573)||(45596703-45596761)
chr2 (515-573)||(45600370-45600428)
chr2 (515-573)||(45604037-45604095)
chr2 (515-573)||(45607704-45607762)
chr2 (515-573)||(45611371-45611429)
chr2 (515-573)||(45615038-45615096)
chr2 (514-575)||(472410-472471)
chr2 (513-542)||(8996754-8996783)
chr2 (438-487)||(29168590-29168639)
chr2 (514-571)||(33853832-33853889)
chr2 (513-562)||(33956366-33956415)
chr2 (514-578)||(7645455-7645519)
chr2 (513-549)||(22857832-22857868)
chr2 (513-581)||(25903680-25903748)
chr2 (511-571)||(41221707-41221767)
chr2 (513-581)||(41517356-41517424)
[»] chr5 (37 HSPs)
chr5 (519-575)||(11089287-11089343)
chr5 (513-560)||(26221037-26221084)
chr5 (511-578)||(28351022-28351089)
chr5 (514-560)||(42364233-42364279)
chr5 (514-571)||(20269523-20269580)
chr5 (511-580)||(28499775-28499844)
chr5 (515-575)||(38394430-38394490)
chr5 (512-571)||(14509900-14509959)
chr5 (513-580)||(21090373-21090440)
chr5 (511-562)||(30046385-30046436)
chr5 (514-560)||(892564-892610)
chr5 (513-566)||(6241368-6241421)
chr5 (517-562)||(7065596-7065641)
chr5 (513-562)||(7065665-7065714)
chr5 (513-562)||(8567956-8568005)
chr5 (514-566)||(22398126-22398178)
chr5 (514-578)||(32741307-32741371)
chr5 (513-560)||(5240239-5240286)
chr5 (513-560)||(21032612-21032659)
chr5 (513-560)||(29486511-29486558)
chr5 (513-575)||(1138301-1138363)
chr5 (513-547)||(14338899-14338933)
chr5 (513-575)||(14751205-14751267)
chr5 (432-486)||(14751216-14751270)
chr5 (514-552)||(28499863-28499901)
chr5 (431-461)||(41527091-41527121)
chr5 (513-542)||(5240306-5240335)
chr5 (512-581)||(8355628-8355696)
chr5 (434-487)||(32741402-32741455)
chr5 (511-564)||(35463962-35464015)
chr5 (514-579)||(38699040-38699105)
chr5 (515-575)||(3814057-3814117)
chr5 (513-573)||(15968315-15968375)
chr5 (439-487)||(20269532-20269580)
chr5 (515-583)||(22731344-22731412)
chr5 (513-561)||(32522608-32522656)
chr5 (520-560)||(42364307-42364347)
[»] chr4 (45 HSPs)
chr4 (511-575)||(38562204-38562268)
chr4 (514-580)||(53225729-53225795)
chr4 (510-562)||(10065143-10065195)
chr4 (512-572)||(20291861-20291921)
chr4 (512-560)||(52673677-52673725)
chr4 (513-560)||(22720519-22720566)
chr4 (514-572)||(39993123-39993181)
chr4 (513-575)||(41622177-41622239)
chr4 (513-575)||(52535953-52536015)
chr4 (513-562)||(23673436-23673485)
chr4 (514-575)||(38562124-38562185)
chr4 (514-574)||(55466117-55466178)
chr4 (514-562)||(6371926-6371974)
chr4 (513-549)||(24100787-24100823)
chr4 (513-549)||(24100888-24100924)
chr4 (514-578)||(32125419-32125483)
chr4 (431-487)||(38562216-38562272)
chr4 (514-566)||(52378755-52378807)
chr4 (513-560)||(52673611-52673658)
chr4 (513-580)||(52840261-52840328)
chr4 (514-544)||(2198077-2198107)
chr4 (513-575)||(10065064-10065126)
chr4 (514-544)||(22720587-22720617)
chr4 (514-560)||(35884365-35884411)
chr4 (514-560)||(35884410-35884456)
chr4 (514-580)||(45828500-45828566)
chr4 (513-582)||(5970274-5970343)
chr4 (431-480)||(10065060-10065109)
chr4 (514-563)||(15170968-15171017)
chr4 (523-560)||(19936508-19936545)
chr4 (513-562)||(20783700-20783749)
chr4 (513-542)||(21861082-21861111)
chr4 (513-542)||(21916945-21916974)
chr4 (513-542)||(22923690-22923719)
chr4 (513-542)||(22928343-22928372)
chr4 (513-542)||(22984622-22984651)
chr4 (513-542)||(22998210-22998239)
chr4 (514-579)||(35328937-35329002)
chr4 (430-487)||(51267067-51267124)
chr4 (514-575)||(51313465-51313526)
chr4 (513-541)||(15794796-15794824)
chr4 (513-541)||(22768176-22768204)
chr4 (514-562)||(23673368-23673415)
chr4 (431-487)||(38562120-38562176)
chr4 (513-573)||(41116566-41116626)
[»] chr7 (24 HSPs)
chr7 (514-560)||(4132468-4132514)
chr7 (513-566)||(17801462-17801515)
chr7 (430-575)||(29229666-29229813)
chr7 (511-575)||(2399778-2399842)
chr7 (514-566)||(42926992-42927044)
chr7 (514-560)||(26982777-26982823)
chr7 (514-560)||(43250420-43250466)
chr7 (514-575)||(12810307-12810368)
chr7 (432-476)||(35985255-35985299)
chr7 (432-476)||(36006663-36006707)
chr7 (513-560)||(21857082-21857129)
chr7 (518-557)||(35048152-35048191)
chr7 (515-581)||(2523856-2523922)
chr7 (513-575)||(10007660-10007722)
chr7 (514-560)||(10342349-10342395)
chr7 (512-542)||(15996195-15996225)
chr7 (511-561)||(18672174-18672224)
chr7 (432-461)||(28038468-28038497)
chr7 (509-562)||(34670429-34670481)
chr7 (514-563)||(41850610-41850659)
chr7 (514-542)||(4132418-4132446)
chr7 (515-559)||(21393305-21393349)
chr7 (432-480)||(34670348-34670396)
chr7 (521-561)||(45441528-45441568)
[»] chr3 (24 HSPs)
chr3 (514-575)||(1779492-1779553)
chr3 (518-575)||(1779578-1779635)
chr3 (513-560)||(50334934-50334981)
chr3 (513-571)||(18093780-18093838)
chr3 (515-560)||(36344518-36344563)
chr3 (513-573)||(22003880-22003940)
chr3 (513-573)||(22011397-22011457)
chr3 (431-471)||(27786562-27786602)
chr3 (515-573)||(5177851-5177909)
chr3 (515-573)||(19790723-19790781)
chr3 (431-481)||(28732555-28732605)
chr3 (514-560)||(29497373-29497419)
chr3 (514-560)||(32186902-32186948)
chr3 (514-544)||(35239682-35239712)
chr3 (431-480)||(16867715-16867764)
chr3 (514-575)||(19202335-19202396)
chr3 (513-566)||(21150149-21150202)
chr3 (513-562)||(30122035-30122084)
chr3 (513-581)||(49658368-49658437)
chr3 (514-578)||(335460-335524)
chr3 (431-487)||(1779583-1779639)
chr3 (515-575)||(21662888-21662948)
chr3 (515-575)||(53441993-53442053)
chr3 (514-562)||(55121255-55121303)
[»] scaffold0003 (1 HSPs)
scaffold0003 (431-487)||(320761-320817)
[»] scaffold0110 (1 HSPs)
scaffold0110 (514-575)||(1617-1678)
[»] scaffold0514 (1 HSPs)
scaffold0514 (511-575)||(5818-5882)
[»] scaffold0009 (1 HSPs)
scaffold0009 (522-581)||(3627-3686)
[»] scaffold0470 (1 HSPs)
scaffold0470 (513-575)||(5876-5938)


Alignment Details
Target: chr8 (Bit Score: 152; Significance: 4e-80; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 234 - 385
Target Start/End: Complemental strand, 11718487 - 11718336
Alignment:
Q  234 atatgtgcactaaggtcacttcgacatgtagttaacatcgaacttgtatgacttgaatttggctcatttaagcaaactcggtctttaatttgtttattaa 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11718487 atatgtgcactaaggtcacttcgacatgtagttaacatcgaacttgtatgacttgaatttggctcatttaagcaaactcggtctttaatttgtttattaa 11718388  T
Q  334 ttaaacaaatcaatttatcaaatattgaacaagtcaaactaattaattcatc 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11718387 ttaaacaaatcaatttatcaaatattgaacaagtcaaactaattaattcatc 11718336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 11718722 - 11718543
Alignment:
Q  15 aaaagagcataataattttatagtttagcagaaactactacataaaatctttcattctaattctttcacacatttaacactgaaacaaaatagtattaag 114  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11718722 aaaagagcataataattttttagtttagcagaaactactacataaaatctttcattctaattcttttacacatttaacactgaaacaaaatagtattaag 11718623  T
Q  115 attgcttcaatcggaacaatatgtatnnnnnnnnngttaaaactagagtgagaacacacaataatgcactagttttttgtt 195  Q
    ||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  11718622 attgcttcaatcggaacaatatgtat-taaaaaaagttaaaactagagtgagaacacacaataatgcactagttttttgtt 11718543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 513 - 575
Target Start/End: Complemental strand, 20694479 - 20694417
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||| | | ||||||||    
T  20694479 gataaattaattattcaatgtatctaaaaagttgatttttgtttataaatgtaaccggaggga 20694417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 513 - 566
Target Start/End: Original strand, 12328782 - 12328835
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatga 566  Q
    ||||||||| |||||||||| || ||||||||||||||||||||||||||||||    
T  12328782 gatacattagttattcaatggatttaaaaagttaatttttgtttataaatatga 12328835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 511 - 575
Target Start/End: Original strand, 6649151 - 6649215
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||||||||||||||||||| ||||||||| | |||||| |||||||||||  ||||||||    
T  6649151 cggatacattaattattcaatgtacctaaaaagtcattttttgcttataaatatggtcggaggga 6649215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 511 - 577
Target Start/End: Original strand, 6590861 - 6590927
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaat 577  Q
    |||||||||||||||||||||||| ||||||||| | |||||| |||||||| ||| | ||||||||    
T  6590861 cggatacattaattattcaatgtacctaaaaagtaattttttgcttataaatgtgaccagagggaat 6590927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 572
Target Start/End: Original strand, 9503623 - 9503681
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggag 572  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||||||| |||| ||||    
T  9503623 atacattaaatattcaatgaatctaaaaagttattttttgtttataaatgtgaatggag 9503681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 431 - 487
Target Start/End: Original strand, 1156998 - 1157054
Alignment:
Q  431 atactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    |||||||||||||||||||||||||| ||||| || ||||| ||||||||| |||||    
T  1156998 atactccatccgatcacatttataagtaaaatgcagctttttagatacattgaataa 1157054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 511 - 571
Target Start/End: Complemental strand, 1784151 - 1784091
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacgga 571  Q
    |||||||||||| ||||||||||||||||||| | | ||||||||||||||| ||| ||||    
T  1784151 cggatacattaaatattcaatgtatctaaaaaatcattttttgtttataaatgtgaccgga 1784091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 566
Target Start/End: Original strand, 14110167 - 14110215
Alignment:
Q  518 attaattattcaatgtatctaaaaagttaatttttgtttataaatatga 566  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  14110167 attaattcttcaatgtatctaaaaagtcattttttgtttataaatatga 14110215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 28205858 - 28205811
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  28205858 gatacattaattattcaatgtatctgaaaaattaaattttgtttataa 28205811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 40737902 - 40737964
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||||||||||||||||| |||||||  || |||||| ||||||||||||  |||||||    
T  40737902 gatacattaattattcaatgtacctaaaaaactattttttgcttataaatatgactggaggga 40737964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 575
Target Start/End: Original strand, 14113294 - 14113355
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||||||||||||||||||||||||| | |||||  ||| |||||||| || |||||    
T  14113294 atacattaattattcaatgtatctaaaaagtcattttttacttagaaatatgaccgaaggga 14113355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 579
Target Start/End: Original strand, 24822808 - 24822873
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatat 579  Q
    ||||||||||||| ||||  ||||||||||| |||||||  ||||||||| || ||||||||||||    
T  24822808 atacattaattatacaataaatctaaaaagtcaattttttcttataaataggaccggagggaatat 24822873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 515 - 563
Target Start/End: Complemental strand, 10839825 - 10839777
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaata 563  Q
    |||||||||||||||||| ||||||||||| |||||||  |||||||||    
T  10839825 tacattaattattcaatgaatctaaaaagtcaattttttcttataaata 10839777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 431 - 487
Target Start/End: Complemental strand, 40223368 - 40223312
Alignment:
Q  431 atactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    ||||||||||||||||  ||||||||||||| ||||| ||| ||||||||| |||||    
T  40223368 atactccatccgatcatttttataagcaaaaaacaacgttttagatacattgaataa 40223312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 553
Target Start/End: Complemental strand, 158486 - 158447
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttg 553  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  158486 atacattaattattcaatgtatctaaaaagtgaaattttg 158447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 571
Target Start/End: Original strand, 4101994 - 4102057
Alignment:
Q  508 tatcggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacgga 571  Q
    |||| |||| ||| ||||||||||| ||||||||| ||  ||||||||||||||||||| ||||    
T  4101994 tatcagataaatttattattcaatgaatctaaaaaattgttttttgtttataaatatgaccgga 4102057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 573
Target Start/End: Original strand, 10184636 - 10184695
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    |||||| |||||||||||| |||||||||||  ||||||  |||||||||||| ||||||    
T  10184636 atacatcaattattcaatgaatctaaaaagtcgattttttcttataaatatgatcggagg 10184695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 544
Target Start/End: Complemental strand, 11322626 - 11322591
Alignment:
Q  509 atcggatacattaattattcaatgtatctaaaaagt 544  Q
    |||||||||||||||||||||||| |||||||||||    
T  11322626 atcggatacattaattattcaatgcatctaaaaagt 11322591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Original strand, 27976806 - 27976853
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    |||||||||||||||||||| |||||||||| | ||||||| ||||||    
T  27976806 gatacattaattattcaatgaatctaaaaagatcatttttgcttataa 27976853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Original strand, 28034075 - 28034122
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    |||||||||||||||||||| |||||||||| | ||||||| ||||||    
T  28034075 gatacattaattattcaatgaatctaaaaagatcatttttgcttataa 28034122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 43140606 - 43140559
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||||||||||| |||| |  ||||||||||||    
T  43140606 gatacattaattattcaatgtatctaataagtaatgttttgtttataa 43140559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 543
Target Start/End: Complemental strand, 1157064 - 1157034
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaag 543  Q
    |||||||||||||||||||||||||||||||    
T  1157064 gatacattaattattcaatgtatctaaaaag 1157034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 575
Target Start/End: Complemental strand, 1223187 - 1223125
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||||||||  ||||| ||||||||||| | |||||  |||||||||||| ||||||||    
T  1223187 gatacattaattacacaatgaatctaaaaagtcacttttttcttataaatatgaccggaggga 1223125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 560
Target Start/End: Original strand, 6197907 - 6197953
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    |||||||||||||| |||||||||||||||| || ||||| ||||||    
T  6197907 atacattaattatttaatgtatctaaaaagtaaagttttgcttataa 6197953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 6616590 - 6616652
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||||||||||| ||||| ||||||| | | |||||| |||||||| ||| ||||||||    
T  6616590 gatacattaattattccatgtacctaaaaaatcattttttgcttataaatgtgaccggaggga 6616652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 20694499 - 20694561
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||| | ||||||||||||||||||| ||| |||||  |||||||| ||| ||||||||    
T  20694499 gatacattgactattcaatgtatctaaaaaattattttttagttataaatgtgaccggaggga 20694561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 542
Target Start/End: Original strand, 42158460 - 42158490
Alignment:
Q  512 ggatacattaattattcaatgtatctaaaaa 542  Q
    |||||||||||||||||||||||||||||||    
T  42158460 ggatacattaattattcaatgtatctaaaaa 42158490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 562
Target Start/End: Original strand, 1784169 - 1784218
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    |||||||||||||||  ||||||||||||||||  |||||| ||||||||    
T  1784169 gatacattaattattagatgtatctaaaaagttgttttttgcttataaat 1784218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 563
Target Start/End: Original strand, 7693118 - 7693167
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaata 563  Q
    |||||||||||| |||||| ||||||||||| |||||||  |||||||||    
T  7693118 atacattaattactcaatgaatctaaaaagtcaattttttcttataaata 7693167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Complemental strand, 13325155 - 13325126
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaa 542  Q
    ||||||||||||||||||||||||||||||    
T  13325155 gatacattaattattcaatgtatctaaaaa 13325126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 562
Target Start/End: Complemental strand, 14578563 - 14578514
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    |||||||||||||||||||| | ||||||  |||||||||| ||||||||    
T  14578563 gatacattaattattcaatgaacctaaaatattaatttttgcttataaat 14578514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 481
Target Start/End: Complemental strand, 14578635 - 14578598
Alignment:
Q  444 tcacatttataagcaaaatacaacttttcagatacatt 481  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  14578635 tcacatttataagcaaaatacaactttttagattcatt 14578598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 563
Target Start/End: Complemental strand, 34711144 - 34711095
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaata 563  Q
    |||||| ||||| |||||| ||||||||||| ||||||| ||||||||||    
T  34711144 atacatcaattactcaatgaatctaaaaagtcaatttttttttataaata 34711095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 578
Target Start/End: Original strand, 429847 - 429911
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaata 578  Q
    ||||||| |||||||||||||||||||||  || |||||| ||||| || |||  ||||||||||    
T  429847 atacattgattattcaatgtatctaaaaaagtattttttgcttatatatgtgattggagggaata 429911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 1784222 - 1784186
Alignment:
Q  444 tcacatttataagcaaaatacaacttttcagatacat 480  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  1784222 tcacatttataagcaaaaaacaactttttagatacat 1784186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 581
Target Start/End: Complemental strand, 6590843 - 6590775
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatatat 581  Q
    |||||||| ||||||  ||||| |||| |||||  |||||| |||||||| |||||||||||| |||||    
T  6590843 gatacattgattattggatgtacctaagaagttgttttttgcttataaatgtgaacggagggagtatat 6590775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 519 - 571
Target Start/End: Original strand, 40223308 - 40223360
Alignment:
Q  519 ttaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacgga 571  Q
    ||||||||||||||||||||||| |||  |||||| ||||||| |||| ||||    
T  40223308 ttaattattcaatgtatctaaaacgttgttttttgcttataaaaatgatcgga 40223360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 549
Target Start/End: Original strand, 43932133 - 43932169
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatt 549  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  43932133 gatacattaattattcaatgaatctaaaaagtcaatt 43932169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 5e-21; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 575
Target Start/End: Original strand, 5368852 - 5368916
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||    
T  5368852 cggatacattaattattcaatgcatctaaaaagttaatttttgcttataaatatgaccggaggga 5368916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 513 - 579
Target Start/End: Complemental strand, 35489257 - 35489191
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatat 579  Q
    |||||||||||||||||||||||||||||||||  |||||| |||||||| ||| ||||||||||||    
T  35489257 gatacattaattattcaatgtatctaaaaagttgttttttgattataaatgtgaccggagggaatat 35489191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 513 - 566
Target Start/End: Original strand, 11900908 - 11900961
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatga 566  Q
    |||| ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  11900908 gatatattaattattcaatgtatctaaaaagttggtttttgtttataaatatga 11900961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 431 - 487
Target Start/End: Original strand, 1609958 - 1610014
Alignment:
Q  431 atactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||||||||| |||||    
T  1609958 atactctatccgatcacatttataagcaaaaaacaactttttagatacattgaataa 1610014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 513 - 571
Target Start/End: Complemental strand, 1610024 - 1609966
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacgga 571  Q
    |||||||||||||||||||||||||||||||||  |||||| |||||||| ||| ||||    
T  1610024 gatacattaattattcaatgtatctaaaaagttgttttttgcttataaatgtgatcgga 1609966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 581
Target Start/End: Original strand, 49166688 - 49166756
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatatat 581  Q
    |||||||||||||||||||||| ||||||||||  |||||| |||||||| ||| | |||||| |||||    
T  49166688 gatacattaattattcaatgtaactaaaaagttgttttttgcttataaatgtgaccagagggagtatat 49166756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 26468354 - 26468307
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||||||| |||||||| || ||||||||||||    
T  26468354 gatacattaattattcaatgtatttaaaaagtgaaattttgtttataa 26468307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 512 - 562
Target Start/End: Complemental strand, 5347023 - 5346973
Alignment:
Q  512 ggatacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    ||||||||||||||||||||||||||||||||  | |||||| ||||||||    
T  5347023 ggatacattaattattcaatgtatctaaaaagacattttttgcttataaat 5346973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 432 - 582
Target Start/End: Complemental strand, 24419678 - 24419524
Alignment:
Q  432 tactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataagttgatttttgt---ttataa--attatcggatacattaattat 526  Q
    |||||| |||| |||||||||||||||||| ||||||||| || |||||| ||||| || || | | |   ||||||  || |  |||||||||| || |    
T  24419678 tactccttccggtcacatttataagcaaaaaacaactttttaggtacattgaataa-ttaatgtatctgacttataattatgactggatacattagttct 24419580  T
Q  527 tcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatatatc 582  Q
    |||||| ||||||||||||  |||||| |||||||| ||| |||||||| ||||||    
T  24419579 tcaatgaatctaaaaagttcttttttgcttataaatgtgaccggagggagtatatc 24419524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 571
Target Start/End: Original strand, 24419613 - 24419671
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacgga 571  Q
    |||||||||||||||||||||| ||||||||||  |||||| |||||||| ||| ||||    
T  24419613 gatacattaattattcaatgtacctaaaaagttgttttttgcttataaatgtgaccgga 24419671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 559
Target Start/End: Complemental strand, 37247632 - 37247586
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttata 559  Q
    |||||||||||||||||||||||||||||| ||| |||||| |||||    
T  37247632 gatacattaattattcaatgtatctaaaaatttattttttgcttata 37247586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 434 - 487
Target Start/End: Original strand, 34890183 - 34890236
Alignment:
Q  434 ctccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    ||||||||| |||||| ||||||||||| ||||||||| ||||||||| |||||    
T  34890183 ctccatccggtcacatatataagcaaaaaacaactttttagatacattgaataa 34890236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 513 - 545
Target Start/End: Complemental strand, 25395978 - 25395946
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagtt 545  Q
    |||||||||||||||||||||||||||||||||    
T  25395978 gatacattaattattcaatgtatctaaaaagtt 25395946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 560
Target Start/End: Complemental strand, 30800240 - 30800192
Alignment:
Q  512 ggatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    |||||||||||| |||||||||||||| ||||| || ||||||||||||    
T  30800240 ggatacattaatcattcaatgtatctagaaagtaaaattttgtttataa 30800192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 573
Target Start/End: Complemental strand, 5700098 - 5700032
Alignment:
Q  509 atcggatacattaattattcaatgtat--ctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||||||||||||||||||||| |||   ||||||| || |||||| |||||||||||| ||||||    
T  5700098 atcggatacattaattattcaatatataattaaaaagctattttttgcttataaatatgatcggagg 5700032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Original strand, 14773803 - 14773850
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    |||||||||||||| |||| ||||||||||||||| ||||| ||||||    
T  14773803 gatacattaattatacaatatatctaaaaagttaaattttgcttataa 14773850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Original strand, 30800289 - 30800336
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||| ||||||||||||  | ||||||||||||    
T  30800289 gatacattaattattcaatatatctaaaaagtagagttttgtttataa 30800336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 428 - 487
Target Start/End: Complemental strand, 31032591 - 31032532
Alignment:
Q  428 tttatactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    ||||||||||||||| ||||||||||||||||||  ||| |||| || | ||||||||||    
T  31032591 tttatactccatccggtcacatttataagcaaaactcaattttttaggttcattaaataa 31032532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 542
Target Start/End: Original strand, 897090 - 897120
Alignment:
Q  512 ggatacattaattattcaatgtatctaaaaa 542  Q
    |||||||||||||||||||||||||||||||    
T  897090 ggatacattaattattcaatgtatctaaaaa 897120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 575
Target Start/End: Original strand, 35489281 - 35489339
Alignment:
Q  517 cattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||||||||||||  |||||||| | |||||| |||||||| ||| ||||||||    
T  35489281 cattaattattcaatgtacataaaaagtcattttttgcttataaatgtgaccggaggga 35489339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 49944897 - 49944847
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaata 563  Q
    ||||||| |||||||||||| |||||||||||||| ||||  |||||||||    
T  49944897 gatacatcaattattcaatgaatctaaaaagttaaatttttcttataaata 49944847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 471
Target Start/End: Original strand, 5368768 - 5368809
Alignment:
Q  430 tatactccatccgatcacatttataagcaaaatacaactttt 471  Q
    |||||||| ||||||||||||||||||||||| | |||||||    
T  5368768 tatactccctccgatcacatttataagcaaaaaataactttt 5368809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 471
Target Start/End: Complemental strand, 8174242 - 8174201
Alignment:
Q  430 tatactccatccgatcacatttataagcaaaatacaactttt 471  Q
    |||||||| |||| |||||||||||||||||| |||||||||    
T  8174242 tatactccctccggtcacatttataagcaaaacacaactttt 8174201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 572
Target Start/End: Complemental strand, 15497544 - 15497483
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggag 572  Q
    ||||||||||| ||| | |||  |||||||||||| |||||||||||||||| ||| |||||    
T  15497544 cggatacattacttagttaataaatctaaaaagttgatttttgtttataaatgtgatcggag 15497483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 575
Target Start/End: Complemental strand, 47911909 - 47911848
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||  ||||||||| | |||||||||  |||||||||||||||| ||| ||||||||    
T  47911909 atacattatgtattcaatgaacctaaaaagtgcatttttgtttataaatgtgaccggaggga 47911848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 575
Target Start/End: Original strand, 47911930 - 47911991
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||| |||| |||| ||| ||||||| | |||||| |||||||||||| ||||||||    
T  47911930 atacattaaatattgaatgaatcaaaaaagtgattttttgcttataaatatgaccggaggga 47911991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 487
Target Start/End: Complemental strand, 49166755 - 49166698
Alignment:
Q  430 tatactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    |||||||| || | |||||||||||||||||| ||||||||| || |||||| |||||    
T  49166755 tatactccctctggtcacatttataagcaaaaaacaactttttagttacattgaataa 49166698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 431 - 487
Target Start/End: Complemental strand, 1610095 - 1610040
Alignment:
Q  431 atactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    |||||||||||| ||||||||||||| |||| |||||||||  |||||||| |||||    
T  1610095 atactccatccggtcacatttataagtaaaa-acaactttttcgatacattgaataa 1610040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 581
Target Start/End: Original strand, 8174175 - 8174243
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatatat 581  Q
    ||||||||||| |||||||| || |||||||||   ||||| |||||||| ||| |||||||| |||||    
T  8174175 gatacattaatcattcaatgaatataaaaagttgtgttttgcttataaatgtgaccggagggagtatat 8174243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 545
Target Start/End: Complemental strand, 8900854 - 8900822
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagtt 545  Q
    |||||||||||||||||||||| ||||||||||    
T  8900854 gatacattaattattcaatgtacctaaaaagtt 8900822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 562
Target Start/End: Original strand, 11016670 - 11016718
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    |||||||| |||||||||  | |||||||||| ||||||||||||||||    
T  11016670 atacattagttattcaataaacctaaaaagttgatttttgtttataaat 11016718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 487
Target Start/End: Original strand, 25395915 - 25395968
Alignment:
Q  430 tatactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    ||||||||||| |||||||||||||||||||    ||||||| ||||||||| |||||    
T  25395915 tatactccatctgatcacatttataagcaaa----aactttttagatacattgaataa 25395968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 563
Target Start/End: Complemental strand, 34662744 - 34662696
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaata 563  Q
    ||||| ||||||| |||| |||||||||||||| |||| ||||||||||    
T  34662744 tacatcaattattgaatgaatctaaaaagttaacttttttttataaata 34662696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 487
Target Start/End: Original strand, 35489199 - 35489247
Alignment:
Q  439 tccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    |||| |||||||||||| ||||| ||||||||| ||||||||| |||||    
T  35489199 tccggtcacatttataatcaaaaaacaactttttagatacattgaataa 35489247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 3e-16; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 511 - 575
Target Start/End: Original strand, 7632848 - 7632912
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||  |||| ||||||||    
T  7632848 cggatacattaattattcagtgtatctaaaaagttaagttttgtttataataatgaccggaggga 7632912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 513 - 566
Target Start/End: Original strand, 24252961 - 24253014
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatga 566  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  24252961 gatacattaattattcaatgtacctaaaaagttattttttgcttataaatatga 24253014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 511 - 575
Target Start/End: Complemental strand, 5070002 - 5069938
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||||||||||||||||||||||||||||||  |||||| |||||||| ||| | ||||||    
T  5070002 cggatacattaattattcaatgtatctaaaaagttgttttttgcttataaatgtgatcagaggga 5069938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 523 - 580
Target Start/End: Complemental strand, 862872 - 862815
Alignment:
Q  523 ttattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatata 580  Q
    |||||||||||| ||||||||| |||||||| |||||||||||| |||||||| ||||    
T  862872 ttattcaatgtacctaaaaagtcaatttttgcttataaatatgaccggagggagtata 862815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 432 - 487
Target Start/End: Original strand, 5069935 - 5069990
Alignment:
Q  432 tactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    |||||| || |||||||||||||||||||| ||||||||| ||||||||| |||||    
T  5069935 tactccctctgatcacatttataagcaaaaaacaactttttagatacattgaataa 5069990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 33123071 - 33123024
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||||||| |||||||| || ||||||||||||    
T  33123071 gatacattaattattcaatgtatttaaaaagtgaagttttgtttataa 33123024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 513 - 581
Target Start/End: Complemental strand, 14589603 - 14589535
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatatat 581  Q
    ||||||| ||||||||||||||||| |||||| || ||||||||||||  |||| || ||||| |||||    
T  14589603 gatacatgaattattcaatgtatctgaaaagtgaagttttgtttataataatgaccgaagggagtatat 14589535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 26388251 - 26388204
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||| ||||||||||||  | ||||||||||||    
T  26388251 gatacattaattattcaatatatctaaaaagtagagttttgtttataa 26388204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 544
Target Start/End: Original strand, 29938695 - 29938726
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagt 544  Q
    ||||||||||||||||||||||||||||||||    
T  29938695 gatacattaattattcaatgtatctaaaaagt 29938726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 862902 - 862963
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||||||||||||||||||||||||  |  |||||| |||||||| ||| ||||||||    
T  862902 gatacattaattattcaatgtatctaaaaa-atgttttttgcttataaatgtgaccggaggga 862963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 3064947 - 3064897
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaata 563  Q
    |||||||||||||| ||||| |||||||||| ||||||||  |||||||||    
T  3064947 gatacattaattatacaatgaatctaaaaagataattttttcttataaata 3064897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 547
Target Start/End: Complemental strand, 1158308 - 1158275
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaa 547  Q
    ||||||||||||||||||| ||||||||||||||    
T  1158308 atacattaattattcaatgaatctaaaaagttaa 1158275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 571
Target Start/End: Original strand, 2271206 - 2271263
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacgga 571  Q
    |||||||| || ||||||| ||||||||||||| |||||| |||||||| ||| ||||    
T  2271206 atacattagttgttcaatgaatctaaaaagttattttttgcttataaatgtgatcgga 2271263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 481
Target Start/End: Complemental strand, 2271270 - 2271221
Alignment:
Q  432 tactccatccgatcacatttataagcaaaatacaacttttcagatacatt 481  Q
    |||| ||||||||||||||||||||||||| | ||||||| |||| ||||    
T  2271270 tactacatccgatcacatttataagcaaaaaataactttttagattcatt 2271221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 563
Target Start/End: Original strand, 7257415 - 7257464
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaata 563  Q
    ||||||||||||||||||| || |||||||| ||||||  ||||||||||    
T  7257415 atacattaattattcaatgaatttaaaaagtcaattttattttataaata 7257464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 529 - 581
Target Start/End: Original strand, 3633706 - 3633758
Alignment:
Q  529 aatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatatat 581  Q
    |||| ||||||||||| | ||||||||||||||| ||| |||||||| |||||    
T  3633706 aatgaatctaaaaagtgattttttgtttataaatgtgatcggagggagtatat 3633758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 429 - 461
Target Start/End: Complemental strand, 7055706 - 7055674
Alignment:
Q  429 ttatactccatccgatcacatttataagcaaaa 461  Q
    ||||||||| |||||||||||||||||||||||    
T  7055706 ttatactccctccgatcacatttataagcaaaa 7055674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 562
Target Start/End: Complemental strand, 8051037 - 8050989
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    |||||||||||||||||| ||| |||||| ||| |||||| ||||||||    
T  8051037 atacattaattattcaatatatttaaaaaattattttttggttataaat 8050989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 431 - 487
Target Start/End: Complemental strand, 16121111 - 16121055
Alignment:
Q  431 atactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    ||||||| |||||||||  ||||||||||||  |||||||| |||| ||||||||||    
T  16121111 atactccctccgatcactattataagcaaaaatcaactttttagattcattaaataa 16121055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 523 - 575
Target Start/End: Complemental strand, 29400717 - 29400665
Alignment:
Q  523 ttattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||||||  |||||||||  |||||||||||||||||||  |||||||    
T  29400717 ttattcaatgtacttaaaaagttgttttttgtttataaatatgattggaggga 29400665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 3e-16; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 509 - 581
Target Start/End: Original strand, 41517440 - 41517512
Alignment:
Q  509 atcggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatatat 581  Q
    ||||||||||||||||||||||||||  |||||||||| |||||| |||||||| ||| |||||||| |||||    
T  41517440 atcggatacattaattattcaatgtacttaaaaagttattttttgcttataaatgtgaccggagggagtatat 41517512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 513 - 573
Target Start/End: Complemental strand, 14725271 - 14725211
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    |||||||||||||||  ||||||||||||||||  ||||||||||||||||||| ||||||    
T  14725271 gatacattaattattagatgtatctaaaaagttgttttttgtttataaatatgaccggagg 14725211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 509 - 559
Target Start/End: Original strand, 14725287 - 14725337
Alignment:
Q  509 atcggatacattaattattcaatgtatctaaaaagttaatttttgtttata 559  Q
    ||||||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  14725287 atcggatacattaattattcaatgtatataaaaaattattttttgtttata 14725337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 509 - 578
Target Start/End: Complemental strand, 27279551 - 27279482
Alignment:
Q  509 atcggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaata 578  Q
    ||||||||||||| |||||||||| | ||||||| ||| |||||| |||||||| ||| |||||||||||    
T  27279551 atcggatacattagttattcaatgaacctaaaaaattattttttgcttataaatgtgaccggagggaata 27279482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 575
Target Start/End: Complemental strand, 11565059 - 11564999
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||||||||||||||||||||| |||  |||||| |||||||| ||| ||||||||    
T  11565059 tacattaattattcaatgtatctaaaatgttgttttttgcttataaatgtgaccggaggga 11564999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 513 - 572
Target Start/End: Complemental strand, 20555322 - 20555263
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggag 572  Q
    ||||||| |||||||||||||||||||||| |||||||||  ||||||||| || |||||    
T  20555322 gatacatcaattattcaatgtatctaaaaaattaattttttcttataaataggaccggag 20555263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 571
Target Start/End: Original strand, 29168580 - 29168638
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacgga 571  Q
    ||||||||||||||| ||||||| |||||||||| |||||| |||||||| ||| ||||    
T  29168580 gatacattaattatttaatgtatttaaaaagttattttttgcttataaatgtgaccgga 29168638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 42698148 - 42698210
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||| ||||| |||||| ||||||||||| || |||| ||||||||||||| ||||||||    
T  42698148 gatacatcaattactcaatgaatctaaaaagtcaaattttttttataaatatgatcggaggga 42698210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 511 - 575
Target Start/End: Original strand, 9733544 - 9733608
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||||| |||||||||| | ||||||| ||  ||||||||||||||| ||| ||||||||    
T  9733544 cggatacattagttattcaatgaacctaaaaaattgttttttgtttataaatgtgaccggaggga 9733608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 7943523 - 7943586
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgt-ttataaatatgaacggaggga 575  Q
    ||||||| |||||||||||| ||||||||||| ||||||| | ||||||||| || ||||||||    
T  7943523 gatacatcaattattcaatgaatctaaaaagtcaatttttttcttataaataggaccggaggga 7943586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 9895684 - 9895641
Alignment:
Q  444 tcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    |||||||||||||||||  ||||||||| |||||||||||||||    
T  9895684 tcacatttataagcaaacaacaactttttagatacattaaataa 9895641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Original strand, 10495724 - 10495771
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    |||||||||| ||||||||||||||||||||| || ||||| ||||||    
T  10495724 gatacattaaatattcaatgtatctaaaaagtgaaattttgcttataa 10495771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 563
Target Start/End: Original strand, 11030271 - 11030326
Alignment:
Q  508 tatcggatacattaattattcaatgtatctaaaaagttaatttttgtttataaata 563  Q
    |||| ||||||| ||||| |||||| |||||||||||||||||||  |||||||||    
T  11030271 tatcagatacatcaattactcaatgaatctaaaaagttaattttttcttataaata 11030326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 432 - 487
Target Start/End: Original strand, 11564996 - 11565051
Alignment:
Q  432 tactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    |||||| |||| |||||||||||||||||| ||||| ||| ||||||||| |||||    
T  11564996 tactccctccggtcacatttataagcaaaaaacaacattttagatacattgaataa 11565051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 433 - 471
Target Start/End: Complemental strand, 1220918 - 1220880
Alignment:
Q  433 actccatccgatcacatttataagcaaaatacaactttt 471  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  1220918 actccatccgatcacatttacaagcaaaaaacaactttt 1220880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 572
Target Start/End: Complemental strand, 5109426 - 5109368
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggag 572  Q
    |||||||||||| |||||| |||||||||||||| ||||  ||||||||| || |||||    
T  5109426 atacattaattactcaatgaatctaaaaagttaactttttcttataaataggaccggag 5109368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 575
Target Start/End: Complemental strand, 30429129 - 30429067
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||||||||| |||| | ||||||||||  |||||| |||||||| ||| ||||||||    
T  30429129 gatacattaattattgaatgaacctaaaaagttgttttttgcttataaatgtgaccggaggga 30429067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 432 - 486
Target Start/End: Complemental strand, 33853974 - 33853920
Alignment:
Q  432 tactccatccgatcacatttataagcaaaatacaacttttcagatacattaaata 486  Q
    |||||| ||||||||||||||||||||||| |  ||||||||||| |||| ||||    
T  33853974 tactccctccgatcacatttataagcaaaaaagcacttttcagattcattcaata 33853920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 563
Target Start/End: Complemental strand, 36881597 - 36881547
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaata 563  Q
    ||||||||||||| |||||||||||||||||| || ||||  |||||||||    
T  36881597 gatacattaattactcaatgtatctaaaaagtcaaatttttcttataaata 36881547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 43100804 - 43100762
Alignment:
Q  518 attaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||||||||| | |||||||| ||||||    
T  43100804 attaattattcaatgtatctaaaaaatgaatttttgcttataa 43100762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 45571092 - 45571034
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||| ||||||| |||| |||||||||||||||||||  ||||||||| || ||||||    
T  45571092 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45571034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 45574759 - 45574701
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||| ||||||| |||| |||||||||||||||||||  ||||||||| || ||||||    
T  45574759 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45574701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 45578426 - 45578368
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||| ||||||| |||| |||||||||||||||||||  ||||||||| || ||||||    
T  45578426 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45578368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 45582093 - 45582035
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||| ||||||| |||| |||||||||||||||||||  ||||||||| || ||||||    
T  45582093 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45582035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 45585760 - 45585702
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||| ||||||| |||| |||||||||||||||||||  ||||||||| || ||||||    
T  45585760 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45585702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 45589427 - 45589369
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||| ||||||| |||| |||||||||||||||||||  ||||||||| || ||||||    
T  45589427 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45589369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 45593094 - 45593036
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||| ||||||| |||| |||||||||||||||||||  ||||||||| || ||||||    
T  45593094 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45593036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 45596761 - 45596703
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||| ||||||| |||| |||||||||||||||||||  ||||||||| || ||||||    
T  45596761 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45596703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 45600428 - 45600370
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||| ||||||| |||| |||||||||||||||||||  ||||||||| || ||||||    
T  45600428 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45600370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 45604095 - 45604037
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||| ||||||| |||| |||||||||||||||||||  ||||||||| || ||||||    
T  45604095 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45604037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 45607762 - 45607704
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||| ||||||| |||| |||||||||||||||||||  ||||||||| || ||||||    
T  45607762 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45607704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 45611429 - 45611371
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||| ||||||| |||| |||||||||||||||||||  ||||||||| || ||||||    
T  45611429 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45611371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 45615096 - 45615038
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||| ||||||| |||| |||||||||||||||||||  ||||||||| || ||||||    
T  45615096 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45615038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 575
Target Start/End: Complemental strand, 472471 - 472410
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||| |||||||||  | |||||||||||  |||||||||||||| ||| ||||||||    
T  472471 atacattagttattcaataaacctaaaaagttatattttgtttataaatgtgaccggaggga 472410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Complemental strand, 8996783 - 8996754
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaa 542  Q
    ||||||||||||||||||||||||||||||    
T  8996783 gatacattaattattcaatgtatctaaaaa 8996754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 487
Target Start/End: Complemental strand, 29168639 - 29168590
Alignment:
Q  438 atccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    ||||| |||||||||||||||||| | ||||||| | |||||||||||||    
T  29168639 atccggtcacatttataagcaaaaaataactttttaaatacattaaataa 29168590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 571
Target Start/End: Complemental strand, 33853889 - 33853832
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacgga 571  Q
    ||||||||  ||||||||| | |||||||||  |||||||||||||||||||| ||||    
T  33853889 atacattatgtattcaatgaacctaaaaagtacatttttgtttataaatatgaccgga 33853832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 562
Target Start/End: Original strand, 33956366 - 33956415
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    ||||||||||||||||||| |||||||||| ||| |||||  ||||||||    
T  33956366 gatacattaattattcaatatatctaaaaatttatttttttcttataaat 33956415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 578
Target Start/End: Complemental strand, 7645519 - 7645455
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaata 578  Q
    ||||||||||||||  ||| |||||||||||   |||||| |||||||| ||| |||||||||||    
T  7645519 atacattaattatttcatgaatctaaaaagtctttttttgcttataaatgtgaccggagggaata 7645455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 549
Target Start/End: Complemental strand, 22857868 - 22857832
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatt 549  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  22857868 gatacataaattattcaatgtatctaaaaagtcaatt 22857832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 581
Target Start/End: Complemental strand, 25903748 - 25903680
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatatat 581  Q
    ||||||||||||||||||||||||||| |||  ||| |||  ||||| |||||| |||| ||| |||||    
T  25903748 gatacattaattattcaatgtatctaataagagaatcttttcttatatatatgatcggacggagtatat 25903680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 511 - 571
Target Start/End: Original strand, 41221707 - 41221767
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacgga 571  Q
    ||||||||||| |||||||||| | ||||||| ||| |||||  |||||||||||| ||||    
T  41221707 cggatacattagttattcaatgaacctaaaaatttattttttacttataaatatgaccgga 41221767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 581
Target Start/End: Complemental strand, 41517424 - 41517356
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatatat 581  Q
    |||||||||||| ||  ||||| ||||||||||  |||||| |||||||| ||| |||||||| |||||    
T  41517424 gatacattaattcttggatgtacctaaaaagttggtttttgcttataaatgtgaccggagggagtatat 41517356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 519 - 575
Target Start/End: Complemental strand, 11089343 - 11089287
Alignment:
Q  519 ttaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||| ||||||||    
T  11089343 ttaattattcaatgtatctaaaaaattattttttgattataaatatgaccggaggga 11089287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 26221084 - 26221037
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||    
T  26221084 gatacattaattattcaatgtatctaaaaagtaaagttttgtttataa 26221037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 511 - 578
Target Start/End: Original strand, 28351022 - 28351089
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaata 578  Q
    ||||||||||| |||||||||| ||||||||||||  |||||| |||||||||||| |||||| ||||    
T  28351022 cggatacattagttattcaatgaatctaaaaagttgttttttgcttataaatatgaccggaggaaata 28351089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 560
Target Start/End: Complemental strand, 42364279 - 42364233
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||    
T  42364279 atacattaattattcaatgtatttaaaaagtaaatttttgtttataa 42364233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 514 - 571
Target Start/End: Original strand, 20269523 - 20269580
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacgga 571  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||||| ||| ||||    
T  20269523 atacattaattattcaatgtatctaaaaaattgttttttgtttataaatgtgatcgga 20269580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 511 - 580
Target Start/End: Complemental strand, 28499844 - 28499775
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatata 580  Q
    ||||||||||| |||||||||| ||||||||| ||| |||||| |||||||| ||| |||||||| ||||    
T  28499844 cggatacattagttattcaatgaatctaaaaaattattttttgcttataaatgtgaccggagggagtata 28499775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 575
Target Start/End: Complemental strand, 38394490 - 38394430
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||||||||||||| ||||||||||| |||||||  ||||||||| || ||||||||    
T  38394490 tacattaattattcaatgaatctaaaaagtcaattttttcttataaataggatcggaggga 38394430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 512 - 571
Target Start/End: Original strand, 14509900 - 14509959
Alignment:
Q  512 ggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacgga 571  Q
    |||||||||||||||||||| |||||||||| ||| ||||| ||||||||| ||| ||||    
T  14509900 ggatacattaattattcaatatatctaaaaaattattttttatttataaatgtgaccgga 14509959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 513 - 580
Target Start/End: Complemental strand, 21090440 - 21090373
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatata 580  Q
    |||||||  ||||||||||||||||||||||||||||||   || |||||| || |||||||||||||    
T  21090440 gatacatacattattcaatgtatctaaaaagttaattttctcttgtaaataggaccggagggaatata 21090373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 511 - 562
Target Start/End: Original strand, 30046385 - 30046436
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    ||||||||||||||||||||||||||||||| || | |||||| ||||||||    
T  30046385 cggatacattaattattcaatgtatctaaaatgtgattttttgcttataaat 30046436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 514 - 560
Target Start/End: Complemental strand, 892610 - 892564
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||||    
T  892610 atacattaattattcaatgaatctaaaaagtgaatttttgcttataa 892564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 566
Target Start/End: Complemental strand, 6241421 - 6241368
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatga 566  Q
    |||| |||||||||||||||||| |||||| ||| ||||| |||||||||||||    
T  6241421 gatatattaattattcaatgtatttaaaaaattattttttatttataaatatga 6241368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 7065641 - 7065596
Alignment:
Q  517 cattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  7065641 cattagttattcaatgtatctaaaaagttcttttttgtttataaat 7065596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 562
Target Start/End: Original strand, 7065665 - 7065714
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    |||||||||||||||||||| || ||||||||| ||||||| ||||||||    
T  7065665 gatacattaattattcaatgaatttaaaaagttgatttttgcttataaat 7065714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 562
Target Start/End: Original strand, 8567956 - 8568005
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    ||||||||||||||||||||||| |||||| | | |||||||||||||||    
T  8567956 gatacattaattattcaatgtatttaaaaaatcattttttgtttataaat 8568005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 566
Target Start/End: Original strand, 22398126 - 22398178
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatga 566  Q
    ||||||||||||||||||| ||||||||||||   |||| |||||||||||||    
T  22398126 atacattaattattcaatgaatctaaaaagttgtattttatttataaatatga 22398178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 578
Target Start/End: Complemental strand, 32741371 - 32741307
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaata 578  Q
    ||||||| |||||| |||  ||||||||||||| ||||||| ||||||||||| |||||| ||||    
T  32741371 atacattgattatttaataaatctaaaaagttattttttgtgtataaatatgatcggaggaaata 32741307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 5240286 - 5240239
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    |||||||||||||||||||||||||||||| | || ||||| ||||||    
T  5240286 gatacattaattattcaatgtatctaaaaaatcaaattttgcttataa 5240239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Original strand, 21032612 - 21032659
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||| ||||||||||||  | ||||||||||||    
T  21032612 gatacattaattattcaatatatctaaaaagtagaattttgtttataa 21032659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 29486558 - 29486511
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||||||||||||| || || ||||| ||||||    
T  29486558 gatacattaattattcaatgtatctaaaatgtgaaattttgcttataa 29486511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 1138301 - 1138363
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||||||||| |||| || |||||| | |||||||  |||||||||||| ||||||||    
T  1138301 gatacattaattatttaatgaatttaaaaaatcaattttttcttataaatatgatcggaggga 1138363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 547
Target Start/End: Original strand, 14338899 - 14338933
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaa 547  Q
    ||||||| |||||||||||||||||||||||||||    
T  14338899 gatacataaattattcaatgtatctaaaaagttaa 14338933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 14751205 - 14751267
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||| || ||||||||||| ||||||||||  |||||| |||||||| ||| ||||||||    
T  14751205 gatacatcaactattcaatgtacctaaaaagttgttttttgcttataaatgtgaccggaggga 14751267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 432 - 486
Target Start/End: Complemental strand, 14751270 - 14751216
Alignment:
Q  432 tactccatccgatcacatttataagcaaaatacaacttttcagatacattaaata 486  Q
    |||||| |||| |||||||||||||||||| ||||||||| || |||||| ||||    
T  14751270 tactccctccggtcacatttataagcaaaaaacaactttttaggtacattgaata 14751216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 552
Target Start/End: Original strand, 28499863 - 28499901
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaattttt 552  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  28499863 atacattaattattcaatatatctaaaaagttatttttt 28499901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 431 - 461
Target Start/End: Complemental strand, 41527121 - 41527091
Alignment:
Q  431 atactccatccgatcacatttataagcaaaa 461  Q
    |||||||||||||||||||||||||||||||    
T  41527121 atactccatccgatcacatttataagcaaaa 41527091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Original strand, 5240306 - 5240335
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaa 542  Q
    ||||||||||||||||||||||||||||||    
T  5240306 gatacattaattattcaatgtatctaaaaa 5240335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 581
Target Start/End: Original strand, 8355628 - 8355696
Alignment:
Q  512 ggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatatat 581  Q
    |||||||||||||||||| ||||| |||||||||  |||||  |||||||||| | ||||| ||||||||    
T  8355628 ggatacattaattattcattgtatttaaaaagtt-gttttttcttataaatataatcggagagaatatat 8355696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 487
Target Start/End: Complemental strand, 32741455 - 32741402
Alignment:
Q  434 ctccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    |||||||||||||||||||||||||||| | || |||| || | ||||||||||    
T  32741455 ctccatccgatcacatttataagcaaaaaataattttttaggttcattaaataa 32741402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 564
Target Start/End: Complemental strand, 35464015 - 35463962
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatat 564  Q
    ||||||||||| |||||||||| | ||||||| ||| |||||| ||||||||||    
T  35464015 cggatacattagttattcaatgaacctaaaaaattattttttgcttataaatat 35463962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 579
Target Start/End: Complemental strand, 38699105 - 38699040
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatat 579  Q
    |||||||||||||  |||||| ||||||| ||| |||||||| |||||| ||| |||||| |||||    
T  38699105 atacattaattatctaatgtacctaaaaaattattttttgttcataaatgtgaccggaggaaatat 38699040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 575
Target Start/End: Original strand, 3814057 - 3814117
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||||||||||| | ||||||||||| |||||||  ||||||| | || ||||||||    
T  3814057 tacattaattattcaacgaatctaaaaagtcaattttttcttataaacaagaccggaggga 3814117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 573
Target Start/End: Complemental strand, 15968375 - 15968315
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||||||||||||| |||| ||||||||| |||| ||||  ||||||||| || ||||||    
T  15968375 gatacattaattattgaatgaatctaaaaaattaactttttcttataaataggaccggagg 15968315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 487
Target Start/End: Complemental strand, 20269580 - 20269532
Alignment:
Q  439 tccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    ||||||||||||||||| ||||| |||| |||| ||||||||| |||||    
T  20269580 tccgatcacatttataaacaaaaaacaattttttagatacattgaataa 20269532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 583
Target Start/End: Original strand, 22731344 - 22731412
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatatatct 583  Q
    ||||||||||||| |||| ||||||||| |||| ||||  ||||||||| || |||||| | |||||||    
T  22731344 tacattaattatttaatgaatctaaaaaattaactttttcttataaataggaccggaggtagtatatct 22731412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 561
Target Start/End: Original strand, 32522608 - 32522656
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaa 561  Q
    ||||||||||||||||||||||| ||||||  || |||||| |||||||    
T  32522608 gatacattaattattcaatgtatttaaaaaactattttttgattataaa 32522656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 520 - 560
Target Start/End: Original strand, 42364307 - 42364347
Alignment:
Q  520 taattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||||||||| || ||||| ||||||    
T  42364307 taattattcaatgtatctaaaaagtgaagttttgcttataa 42364347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 511 - 575
Target Start/End: Original strand, 38562204 - 38562268
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||||||||||||||||||||||||||| ||  |||||| |||||||| ||| ||||||||    
T  38562204 cggatacattaattattcaatgtatctaaaaaattgttttttgcttataaatgtgaccggaggga 38562268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 580
Target Start/End: Original strand, 53225729 - 53225795
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatata 580  Q
    ||||||||||||||||||| ||||||||||| |||||||  ||||||||| || |||||||| ||||    
T  53225729 atacattaattattcaatgaatctaaaaagtcaattttttcttataaataggaccggagggagtata 53225795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 562
Target Start/End: Original strand, 10065143 - 10065195
Alignment:
Q  510 tcggatacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    ||||||||||||||||||||||||| ||||||||| | |||||| ||||||||    
T  10065143 tcggatacattaattattcaatgtacctaaaaagtcattttttgcttataaat 10065195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 512 - 572
Target Start/End: Original strand, 20291861 - 20291921
Alignment:
Q  512 ggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggag 572  Q
    |||||||||| |||||||||  ||||||||||||| |||||| |||||||||||| |||||    
T  20291861 ggatacattagttattcaataaatctaaaaagttattttttgcttataaatatgatcggag 20291921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 512 - 560
Target Start/End: Original strand, 52673677 - 52673725
Alignment:
Q  512 ggatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||||||||||||||||| || ||||| ||||||    
T  52673677 ggatacattaattattcaatgtatctaaaaagtgaaattttgcttataa 52673725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 22720566 - 22720519
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||    
T  22720566 gatacattaattattcaatgtatctaaaaagtggaattttgtttataa 22720519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 514 - 572
Target Start/End: Original strand, 39993123 - 39993181
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggag 572  Q
    ||||||||||||||||||| ||||||||||||| |||||  |||||||| ||| |||||    
T  39993123 atacattaattattcaatgaatctaaaaagttattttttacttataaatgtgaccggag 39993181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 41622177 - 41622239
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||||| |||||||||||||||||||| || |||| ||||||| | ||| ||||||||    
T  41622177 gatacattaatcattcaatgtatctaaaaagtgaacttttatttataactgtgatcggaggga 41622239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 575
Target Start/End: Complemental strand, 52536015 - 52535953
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||  |||||||||||||||||||||||||| ||||  ||||||||| || ||||||||    
T  52536015 gatacatacattattcaatgtatctaaaaagttaactttttcttataaataagatcggaggga 52535953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 562
Target Start/End: Original strand, 23673436 - 23673485
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    ||||||||||||||||||| || ||||||||||| |||||| ||||||||    
T  23673436 gatacattaattattcaatatacctaaaaagttattttttgcttataaat 23673485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 575
Target Start/End: Complemental strand, 38562185 - 38562124
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||||||||||||||||||||| |||||  |||||| |||||||| ||| || |||||    
T  38562185 atacattaattattcaatgtatctaacaagttgttttttgcttataaatgtgaccgaaggga 38562124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 574
Target Start/End: Original strand, 55466117 - 55466178
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagtta-atttttgtttataaatatgaacggaggg 574  Q
    |||||| ||||||| ||| |||||||||||||| |||||| ||||||||||||| |||||||    
T  55466117 atacataaattatttaatatatctaaaaagttatatttttttttataaatatgatcggaggg 55466178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 562
Target Start/End: Complemental strand, 6371974 - 6371926
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    ||||||||||||||||||||| ||||||||| | |||||| ||||||||    
T  6371974 atacattaattattcaatgtacctaaaaagtcattttttgcttataaat 6371926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 513 - 549
Target Start/End: Complemental strand, 24100823 - 24100787
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatt 549  Q
    |||||||||||||||||||| ||||||||||||||||    
T  24100823 gatacattaattattcaatgaatctaaaaagttaatt 24100787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 513 - 549
Target Start/End: Original strand, 24100888 - 24100924
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatt 549  Q
    |||||||||||||||||||| ||||||||||||||||    
T  24100888 gatacattaattattcaatgaatctaaaaagttaatt 24100924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 578
Target Start/End: Original strand, 32125419 - 32125483
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaata 578  Q
    ||||||||  ||||||||| | |||||||||  ||||||| |||||||||||| |||||||||||    
T  32125419 atacattagatattcaatgaacctaaaaagtagatttttgcttataaatatgaccggagggaata 32125483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 431 - 487
Target Start/End: Complemental strand, 38562272 - 38562216
Alignment:
Q  431 atactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    ||||||| |||| |||||||||||||||||| |||| |||| ||||||||| |||||    
T  38562272 atactccctccggtcacatttataagcaaaaaacaattttttagatacattgaataa 38562216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 566
Target Start/End: Original strand, 52378755 - 52378807
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatga 566  Q
    |||||||||||||||||| |||||||| ||| | |||||| ||||||||||||    
T  52378755 atacattaattattcaatatatctaaagagtcattttttgcttataaatatga 52378807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 52673658 - 52673611
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||| |||||||||||| || ||||| ||||||    
T  52673658 gatacattaattattcaatatatctaaaaagtaaagttttgcttataa 52673611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 580
Target Start/End: Complemental strand, 52840328 - 52840261
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatata 580  Q
    ||||||||||||||| ||||||  |||||| ||| |||||| |||||||| ||| |||||||| ||||    
T  52840328 gatacattaattatttaatgtacttaaaaaattattttttgcttataaatgtgaccggagggagtata 52840261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 544
Target Start/End: Complemental strand, 2198107 - 2198077
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagt 544  Q
    |||||||||||||||||||||||||||||||    
T  2198107 atacattaattattcaatgtatctaaaaagt 2198077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 575
Target Start/End: Complemental strand, 10065126 - 10065064
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||||||||||  ||||| ||||||||||  |||||| |||||||| ||| ||||||||    
T  10065126 gatacattaattattggatgtacctaaaaagttgttttttgcttataaatgtgaccggaggga 10065064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 544
Target Start/End: Original strand, 22720587 - 22720617
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagt 544  Q
    |||||||||||||||||||||||||||||||    
T  22720587 atacattaattattcaatgtatctaaaaagt 22720617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 560
Target Start/End: Complemental strand, 35884411 - 35884365
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||| ||||||||||||||||||||||| ||  |||||||||||    
T  35884411 atacattgattattcaatgtatctaaaaagtcaaagtttgtttataa 35884365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 560
Target Start/End: Original strand, 35884410 - 35884456
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||| ||||||||||||||||||||||| ||  |||||||||||    
T  35884410 atacattgattattcaatgtatctaaaaagtcaaagtttgtttataa 35884456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 580
Target Start/End: Original strand, 45828500 - 45828566
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatata 580  Q
    |||||||||||| |||||| ||||||||| | |||||||  ||||||||| || || ||||||||||    
T  45828500 atacattaattactcaatgaatctaaaaaatcaattttttcttataaataggaccgaagggaatata 45828566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 582
Target Start/End: Complemental strand, 5970343 - 5970274
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatatatc 582  Q
    |||||||  ||||||||||||||||||||||| || |||  |||||||||| || || ||||| ||||||    
T  5970343 gatacatacattattcaatgtatctaaaaagtcaactttcttttataaataggaccgaagggagtatatc 5970274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 480
Target Start/End: Original strand, 10065060 - 10065109
Alignment:
Q  431 atactccatccgatcacatttataagcaaaatacaacttttcagatacat 480  Q
    ||||||| |||| |||||||||||||||||| ||||||||| || |||||    
T  10065060 atactccctccggtcacatttataagcaaaaaacaactttttaggtacat 10065109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 563
Target Start/End: Original strand, 15170968 - 15171017
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaata 563  Q
    |||||| |||||||||||||||||||||||| |||| || ||| ||||||    
T  15170968 atacataaattattcaatgtatctaaaaagtaaattgttttttgtaaata 15171017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 560
Target Start/End: Complemental strand, 19936545 - 19936508
Alignment:
Q  523 ttattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  19936545 ttattcaatgaatctaaaaagttgatttttgtttataa 19936508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 562
Target Start/End: Complemental strand, 20783749 - 20783700
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    ||||||||||||||||||||||  |||||||| | ||||| |||||||||    
T  20783749 gatacattaattattcaatgtacttaaaaagtcattttttatttataaat 20783700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Complemental strand, 21861111 - 21861082
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaa 542  Q
    ||||||||||||||||||||||||||||||    
T  21861111 gatacattaattattcaatgtatctaaaaa 21861082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Complemental strand, 21916974 - 21916945
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaa 542  Q
    ||||||||||||||||||||||||||||||    
T  21916974 gatacattaattattcaatgtatctaaaaa 21916945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Complemental strand, 22923719 - 22923690
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaa 542  Q
    ||||||||||||||||||||||||||||||    
T  22923719 gatacattaattattcaatgtatctaaaaa 22923690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Complemental strand, 22928372 - 22928343
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaa 542  Q
    ||||||||||||||||||||||||||||||    
T  22928372 gatacattaattattcaatgtatctaaaaa 22928343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Complemental strand, 22984651 - 22984622
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaa 542  Q
    ||||||||||||||||||||||||||||||    
T  22984651 gatacattaattattcaatgtatctaaaaa 22984622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Complemental strand, 22998239 - 22998210
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaa 542  Q
    ||||||||||||||||||||||||||||||    
T  22998239 gatacattaattattcaatgtatctaaaaa 22998210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 579
Target Start/End: Complemental strand, 35329002 - 35328937
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatat 579  Q
    |||||| ||||||| |||||||||||||||| |||| || ||| |||||| || ||||| ||||||    
T  35329002 atacataaattatttaatgtatctaaaaagtaaattattttttgtaaataggaccggagagaatat 35328937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 487
Target Start/End: Original strand, 51267067 - 51267124
Alignment:
Q  430 tatactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    |||||||| |||| ||||||||||||||||  | |||||||| |||| ||||||||||    
T  51267067 tatactccctccggtcacatttataagcaactttcaactttttagattcattaaataa 51267124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 575
Target Start/End: Complemental strand, 51313526 - 51313465
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||  ||||||||| | |||||||||  |||||||||||||||| ||| ||||||||    
T  51313526 atacattatgtattcaatgaagctaaaaagtacatttttgtttataaatgtgatcggaggga 51313465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 541
Target Start/End: Complemental strand, 15794824 - 15794796
Alignment:
Q  513 gatacattaattattcaatgtatctaaaa 541  Q
    |||||||||||||||||||||||||||||    
T  15794824 gatacattaattattcaatgtatctaaaa 15794796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 541
Target Start/End: Complemental strand, 22768204 - 22768176
Alignment:
Q  513 gatacattaattattcaatgtatctaaaa 541  Q
    |||||||||||||||||||||||||||||    
T  22768204 gatacattaattattcaatgtatctaaaa 22768176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 562
Target Start/End: Complemental strand, 23673415 - 23673368
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    ||||||||||||||| |||||| |||||||||| |||||| ||||||||    
T  23673415 atacattaattattcgatgtat-taaaaagttattttttgcttataaat 23673368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 431 - 487
Target Start/End: Original strand, 38562120 - 38562176
Alignment:
Q  431 atactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    ||||||| | || |||||||||||||||||| ||||||| | ||||||||| |||||    
T  38562120 atactcccttcggtcacatttataagcaaaaaacaacttgttagatacattgaataa 38562176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 573
Target Start/End: Complemental strand, 41116626 - 41116566
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||||| ||||| |||||| |||||||||||||| ||||  ||||||||| || ||||||    
T  41116626 gatacatcaattactcaatgaatctaaaaagttaaatttttcttataaataggaccggagg 41116566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 560
Target Start/End: Original strand, 4132468 - 4132514
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  4132468 atacattaaatattcaatgtatctaaaaagttaagttttgtttataa 4132514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 513 - 566
Target Start/End: Original strand, 17801462 - 17801515
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatga 566  Q
    |||||||||||||||||||| ||||||||||||  |||||| ||||||||||||    
T  17801462 gatacattaattattcaatgaatctaaaaagttgttttttgattataaatatga 17801515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 430 - 575
Target Start/End: Original strand, 29229666 - 29229813
Alignment:
Q  430 tatactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataagt--tgatttttgtttataaat-tatcggatacattaattat 526  Q
    ||||||||||||| |||||| ||||||||||| ||||||||| |||| ||||||| || |  ||  ||| || |||| ||   || ||||||||| ||||    
T  29229666 tatactccatccggtcacatatataagcaaaaaacaactttttagattcattaaacaactaatgcatttggtctatatataggtcagatacattagttat 29229765  T
Q  527 tcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||| | ||||||||||  |||||| |||||||||||| ||||||||    
T  29229766 tcaatgaacctaaaaagtt-gtttttgcttataaatatgaccggaggga 29229813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 511 - 575
Target Start/End: Original strand, 2399778 - 2399842
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||||||||||||||| ||  |||||||||| ||||| |||||||||||||  |||||||    
T  2399778 cggatacattaattattcaatatacttaaaaagttattttttatttataaatatgacaggaggga 2399842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 566
Target Start/End: Complemental strand, 42927044 - 42926992
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatga 566  Q
    |||||||| |||||||||| |||||| ||||| ||||||||||||||||||||    
T  42927044 atacattagttattcaatgaatctaagaagttgatttttgtttataaatatga 42926992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 514 - 560
Target Start/End: Complemental strand, 26982823 - 26982777
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||||||||||||||| || ||||| ||||||    
T  26982823 atacattaattattcaatgtatctaaaaagtgaagttttgcttataa 26982777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 514 - 560
Target Start/End: Original strand, 43250420 - 43250466
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||||||||||||||| || ||||| ||||||    
T  43250420 atacattaattattcaatgtatctaaaaagtaaagttttgcttataa 43250466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 575
Target Start/End: Complemental strand, 12810368 - 12810307
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||||||||||||||||||||||| |||  |||||| |||||||| |||  |||||||    
T  12810368 atacattaattattcaatgtatctaaaacgttggtttttggttataaatgtgattggaggga 12810307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 432 - 476
Target Start/End: Original strand, 35985255 - 35985299
Alignment:
Q  432 tactccatccgatcacatttataagcaaaatacaacttttcagat 476  Q
    |||||| | ||||||||||||||||||||||||||||||| ||||    
T  35985255 tactcctttcgatcacatttataagcaaaatacaactttttagat 35985299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 432 - 476
Target Start/End: Original strand, 36006663 - 36006707
Alignment:
Q  432 tactccatccgatcacatttataagcaaaatacaacttttcagat 476  Q
    |||||| | ||||||||||||||||||||||||||||||| ||||    
T  36006663 tactcctttcgatcacatttataagcaaaatacaactttttagat 36006707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 21857129 - 21857082
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||||| |||||||||| || ||||| ||||||    
T  21857129 gatacattaattattcaatgtgtctaaaaagtaaacttttgcttataa 21857082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 557
Target Start/End: Complemental strand, 35048191 - 35048152
Alignment:
Q  518 attaattattcaatgtatctaaaaagttaatttttgttta 557  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  35048191 attaattattcaatgtatctaaaaagatattttttgttta 35048152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 581
Target Start/End: Original strand, 2523856 - 2523922
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatatat 581  Q
    ||||||||||| |||||| ||||||||||| || ||||  ||||||||| || |||||||| |||||    
T  2523856 tacattaattactcaatgaatctaaaaagtcaactttttcttataaataggaccggagggagtatat 2523922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 10007660 - 10007722
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||||||||| ||||| ||||||||||| || ||||  ||||||||| || ||||||||    
T  10007660 gatacattaattatacaatgaatctaaaaagtcaactttttcttataaataggaccggaggga 10007722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 560
Target Start/End: Original strand, 10342349 - 10342395
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    |||||||||||||||||||||| |||||  | |||||||||||||||    
T  10342349 atacattaattattcaatgtatttaaaagatgaatttttgtttataa 10342395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 542
Target Start/End: Original strand, 15996195 - 15996225
Alignment:
Q  512 ggatacattaattattcaatgtatctaaaaa 542  Q
    |||||||||||||||||||||||||||||||    
T  15996195 ggatacattaattattcaatgtatctaaaaa 15996225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 511 - 561
Target Start/End: Original strand, 18672174 - 18672224
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaa 561  Q
    ||||||||| ||||||||||||||||||||| || ||||||| ||| ||||    
T  18672174 cggatacataaattattcaatgtatctaaaatgtcaatttttttttgtaaa 18672224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 461
Target Start/End: Original strand, 28038468 - 28038497
Alignment:
Q  432 tactccatccgatcacatttataagcaaaa 461  Q
    ||||||||||||||||||||||||||||||    
T  28038468 tactccatccgatcacatttataagcaaaa 28038497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 562
Target Start/End: Original strand, 34670429 - 34670481
Alignment:
Q  509 atcggatacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    ||||||||||||||||||||||||||| | |||||| | |||||| ||||||||    
T  34670429 atcggatacattaattattcaatgtat-ttaaaagtcattttttgcttataaat 34670481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 563
Target Start/End: Complemental strand, 41850659 - 41850610
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaata 563  Q
    ||||||||||||||||||| ||||||||| |||| ||||  |||||||||    
T  41850659 atacattaattattcaatgaatctaaaaaattaactttttcttataaata 41850610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 542
Target Start/End: Complemental strand, 4132446 - 4132418
Alignment:
Q  514 atacattaattattcaatgtatctaaaaa 542  Q
    |||||||||||||||||||||||||||||    
T  4132446 atacattaattattcaatgtatctaaaaa 4132418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 559
Target Start/End: Complemental strand, 21393349 - 21393305
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttata 559  Q
    ||||||| | || ||||| ||||||||||||||||||||||||||    
T  21393349 tacattagtcatgcaatgaatctaaaaagttaatttttgtttata 21393305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 34670348 - 34670396
Alignment:
Q  432 tactccatccgatcacatttataagcaaaatacaacttttcagatacat 480  Q
    |||||| |||| |||||||||||||||||| ||||||||| || |||||    
T  34670348 tactccctccggtcacatttataagcaaaaaacaactttttaggtacat 34670396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 521 - 561
Target Start/End: Original strand, 45441528 - 45441568
Alignment:
Q  521 aattattcaatgtatctaaaaagttaatttttgtttataaa 561  Q
    ||||||||| || ||||||||||||||||||| ||||||||    
T  45441528 aattattcattgaatctaaaaagttaatttttttttataaa 45441568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000004; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 514 - 575
Target Start/End: Complemental strand, 1779553 - 1779492
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||| |||||||||||||| |||||||||||  |||||||||||||| ||| ||||||||    
T  1779553 atacatcaattattcaatgtacctaaaaagttatgttttgtttataaatgtgaccggaggga 1779492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 575
Target Start/End: Original strand, 1779578 - 1779635
Alignment:
Q  518 attaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||||||||||||||||||||||  |||||||||||| || ||| ||||||||    
T  1779578 attaattattcaatgtatctaaaaagttggtttttgtttatatatgtgatcggaggga 1779635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 50334981 - 50334934
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||||||||||||| || || ||||||||||||    
T  50334981 gatacattaattattcaatgtatctaaaatgtgaagttttgtttataa 50334934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 571
Target Start/End: Complemental strand, 18093838 - 18093780
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacgga 571  Q
    ||||||||||||||||||||||| |||||| ||  ||||||||||||||| ||| ||||    
T  18093838 gatacattaattattcaatgtatttaaaaatttgttttttgtttataaatgtgaccgga 18093780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 515 - 560
Target Start/End: Original strand, 36344518 - 36344563
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||    
T  36344518 tacattaattattcaatgtatctaaaaagtataattttgtttataa 36344563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 513 - 573
Target Start/End: Original strand, 22003880 - 22003940
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||||| |||||||||||||||||||||||| ||||||   ||||||||| || ||||||    
T  22003880 gatacataaattattcaatgtatctaaaaagtcaattttctgttataaataggaccggagg 22003940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 513 - 573
Target Start/End: Original strand, 22011397 - 22011457
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||||| |||||||||||||||||||||||| ||||||   ||||||||| || ||||||    
T  22011397 gatacataaattattcaatgtatctaaaaagtcaattttctgttataaataggaccggagg 22011457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 27786602 - 27786562
Alignment:
Q  431 atactccatccgatcacatttataagcaaaatacaactttt 471  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  27786602 atactccctccgatcacatttataagcaaaacacaactttt 27786562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 573
Target Start/End: Original strand, 5177851 - 5177909
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    ||||| ||||||| |||| |||||||||||||||||||  ||||||||| || ||||||    
T  5177851 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 5177909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 19790781 - 19790723
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagg 573  Q
    |||||||||||||||||||| |||||||  || |||||| |||||||| ||| ||||||    
T  19790781 tacattaattattcaatgtacctaaaaaactactttttgcttataaatgtgaccggagg 19790723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 431 - 481
Target Start/End: Complemental strand, 28732605 - 28732555
Alignment:
Q  431 atactccatccgatcacatttataagcaaaatacaacttttcagatacatt 481  Q
    ||||||| | ||||||||||||||||||||||| ||||||| |||| ||||    
T  28732605 atactcccttcgatcacatttataagcaaaatagaactttttagattcatt 28732555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 560
Target Start/End: Complemental strand, 29497419 - 29497373
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    |||||||||||| |||||||||||||||||| || ||||| ||||||    
T  29497419 atacattaattagtcaatgtatctaaaaagtaaaattttgcttataa 29497373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 560
Target Start/End: Complemental strand, 32186948 - 32186902
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataa 560  Q
    ||||||||||||||| |||||| |||||||| || ||||||||||||    
T  32186948 atacattaattattccatgtatttaaaaagtgaaattttgtttataa 32186902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 544
Target Start/End: Complemental strand, 35239712 - 35239682
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagt 544  Q
    |||||||||||||||||||||||||||||||    
T  35239712 atacattaattattcaatgtatctaaaaagt 35239682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 480
Target Start/End: Complemental strand, 16867764 - 16867715
Alignment:
Q  431 atactccatccgatcacatttataagcaaaatacaacttttcagatacat 480  Q
    ||||||| | ||||||||||||||||||||| ||||||||| || |||||    
T  16867764 atactcccttcgatcacatttataagcaaaaaacaactttttaggtacat 16867715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 575
Target Start/End: Original strand, 19202335 - 19202396
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||| ||||||| |||||||||||||||| |||| || ||| |||||| || ||||||||    
T  19202335 atacataaattatttaatgtatctaaaaagtaaattgttttttgtaaataggaccggaggga 19202396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 566
Target Start/End: Complemental strand, 21150202 - 21150149
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatga 566  Q
    ||||||||| ||||| |||| ||||||||||||| ||||||  |||||||||||    
T  21150202 gatacattagttatttaatgaatctaaaaagttattttttgcatataaatatga 21150149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 562
Target Start/End: Original strand, 30122035 - 30122084
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    ||||||||||||||||||| || ||||||| ||| |||||| ||||||||    
T  30122035 gatacattaattattcaatatacctaaaaaattattttttgcttataaat 30122084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 581
Target Start/End: Original strand, 49658368 - 49658437
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttg-tttataaatatgaacggagggaatatat 581  Q
    |||||| ||||||||||||| | ||||||| || | ||||| ||||||||| |||||||||||| |||||    
T  49658368 gatacaataattattcaatgaacctaaaaaattgacttttgttttataaatgtgaacggagggagtatat 49658437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 578
Target Start/End: Original strand, 335460 - 335524
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaata 578  Q
    |||||| ||||||| |||||||||||||||| |||| || ||| |||||| || ||||| |||||    
T  335460 atacataaattatttaatgtatctaaaaagtaaattgttttttgtaaataggaccggagagaata 335524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 431 - 487
Target Start/End: Complemental strand, 1779639 - 1779583
Alignment:
Q  431 atactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    ||||||| ||||||||||| ||||| |||||  |||||||| ||||||||| |||||    
T  1779639 atactccctccgatcacatatataaacaaaaaccaactttttagatacattgaataa 1779583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 575
Target Start/End: Complemental strand, 21662948 - 21662888
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||||| |||||| ||||||||||| || ||||  ||||||||| || ||||||||    
T  21662948 tacattaattactcaatgaatctaaaaagtcaactttttcttataaataggaccggaggga 21662888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 575
Target Start/End: Original strand, 53441993 - 53442053
Alignment:
Q  515 tacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||||||||||||| || |||||||| || ||||  ||||||||| || ||||||||    
T  53441993 tacattaattattcaatgaatttaaaaagtcaactttttcttataaataggaccggaggga 53442053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 562
Target Start/End: Original strand, 55121255 - 55121303
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaat 562  Q
    |||||||||||||| |||  ||||||||||||| |||||| ||||||||    
T  55121255 atacattaattatttaataaatctaaaaagttattttttgcttataaat 55121303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 431 - 487
Target Start/End: Complemental strand, 320817 - 320761
Alignment:
Q  431 atactccatccgatcacatttataagcaaaatacaacttttcagatacattaaataa 487  Q
    ||||||| ||| ||||||||||||||||||| ||||||||| |||| ||||||||||    
T  320817 atactccctccaatcacatttataagcaaaacacaactttttagattcattaaataa 320761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 575
Target Start/End: Original strand, 1617 - 1678
Alignment:
Q  514 atacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||| |||||||||||| ||||||||| |||||||||  ||||||||| || ||||||||    
T  1617 atacatcaattattcaatgaatctaaaaaattaattttttcttataaataagaccggaggga 1678  T

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Target: scaffold0514 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 511 - 575
Target Start/End: Complemental strand, 5882 - 5818
Alignment:
Q  511 cggatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    ||||||||||| |||||||||||| ||||||||| | |||||| |||||||| ||| | ||||||    
T  5882 cggatacattagttattcaatgtacctaaaaagtcattttttgcttataaatgtgatccgaggga 5818  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 522 - 581
Target Start/End: Complemental strand, 3686 - 3627
Alignment:
Q  522 attattcaatgtatctaaaaagttaatttttgtttataaatatgaacggagggaatatat 581  Q
    ||||||||||||||||||||||| || |||  |||||||||| || |||| |||||||||    
T  3686 attattcaatgtatctaaaaagtcaactttcttttataaataggaccggaaggaatatat 3627  T

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Target: scaffold0470 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 5876 - 5938
Alignment:
Q  513 gatacattaattattcaatgtatctaaaaagttaatttttgtttataaatatgaacggaggga 575  Q
    |||||||||||||||| ||||| ||||||| | | |||||| |||||||| ||| ||||||||    
T  5876 gatacattaattattccatgtacctaaaaaatcattttttgcttataaatgtgaccggaggga 5938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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