View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20633_high_132 (Length: 271)
Name: NF20633_high_132
Description: NF20633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20633_high_132 |
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Alignment Details
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 1154133 - 1153898
Alignment:
| Q |
14 |
aaatcagcagcatcagcttgaagtaaattaaccttctcaacaacaatggtagcaacaacatttcttacactatgagcatcttgataaaatccaggaacag |
113 |
Q |
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| T |
1154133 |
aaatcagcagcatcagcttgaagtaaattaaccttctcaacaacaatggtagcaacaacatttcttacactatgagcatcttgataaaatccaggaacag |
1154034 |
T |
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| Q |
114 |
aagcttttcctaatgggattccacggtacaacacagtaaaactggactcgccgtacttgatccctaccttattaggattagccgcttggaatagaagacg |
213 |
Q |
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| T |
1154033 |
aagcttttcctaatgggattccacggtacaacacagtaaaactggactcgccgtacttgatccctaccttattaggattagccgcttggaatagaagacg |
1153934 |
T |
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| Q |
214 |
aattgttaaggaaagtgaagcgccggtgccggtggg |
249 |
Q |
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| T |
1153933 |
aattgttaaggaaagtgaagcgccggcgccggtggg |
1153898 |
T |
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