View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20633_high_136 (Length: 267)

Name: NF20633_high_136
Description: NF20633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20633_high_136
NF20633_high_136
[»] chr7 (15 HSPs)
chr7 (10-249)||(23820395-23820634)
chr7 (10-247)||(24808771-24808988)
chr7 (10-155)||(21118361-21118505)
chr7 (8-113)||(40901803-40901908)
chr7 (56-112)||(20492489-20492545)
chr7 (56-110)||(10325112-10325166)
chr7 (56-110)||(29526837-29526891)
chr7 (64-116)||(12980735-12980787)
chr7 (56-116)||(8321192-8321252)
chr7 (63-110)||(21824386-21824433)
chr7 (56-110)||(664993-665047)
chr7 (56-110)||(21588154-21588208)
chr7 (72-116)||(717497-717541)
chr7 (74-110)||(5086604-5086640)
chr7 (74-110)||(5609531-5609567)
[»] chr3 (21 HSPs)
chr3 (10-249)||(51976632-51976871)
chr3 (10-249)||(36684777-36685016)
chr3 (10-249)||(8705584-8705823)
chr3 (10-249)||(9057471-9057710)
chr3 (13-249)||(4978417-4978654)
chr3 (10-231)||(45736356-45736577)
chr3 (58-191)||(49758966-49759099)
chr3 (40-117)||(38998911-38998988)
chr3 (10-117)||(47165345-47165452)
chr3 (30-117)||(37796609-37796696)
chr3 (83-183)||(26390800-26390900)
chr3 (56-110)||(32073610-32073664)
chr3 (65-117)||(20916413-20916465)
chr3 (65-117)||(20925375-20925427)
chr3 (63-110)||(2439499-2439546)
chr3 (74-110)||(8968408-8968444)
chr3 (74-110)||(9734472-9734508)
chr3 (64-116)||(10346537-10346589)
chr3 (74-110)||(15790052-15790088)
chr3 (56-116)||(27265803-27265863)
chr3 (74-110)||(34935098-34935134)
[»] chr2 (7 HSPs)
chr2 (10-249)||(29894321-29894560)
chr2 (10-249)||(24543085-24543324)
chr2 (10-249)||(36364912-36365151)
chr2 (30-117)||(40287037-40287124)
chr2 (66-117)||(12555415-12555466)
chr2 (74-110)||(21085019-21085055)
chr2 (62-110)||(31426458-31426506)
[»] chr1 (21 HSPs)
chr1 (10-249)||(11351597-11351836)
chr1 (10-225)||(21515101-21515314)
chr1 (10-247)||(6784152-6784389)
chr1 (56-249)||(20639462-20639655)
chr1 (10-247)||(32988886-32989125)
chr1 (17-117)||(2536489-2536589)
chr1 (10-155)||(44839857-44840002)
chr1 (39-117)||(51080701-51080779)
chr1 (29-115)||(39648376-39648462)
chr1 (56-110)||(26418791-26418845)
chr1 (56-110)||(32108435-32108489)
chr1 (10-76)||(52823473-52823539)
chr1 (56-116)||(2114361-2114421)
chr1 (64-116)||(3601275-3601327)
chr1 (62-110)||(4179980-4180028)
chr1 (56-108)||(5811388-5811440)
chr1 (64-116)||(17321880-17321932)
chr1 (63-110)||(22161760-22161807)
chr1 (56-110)||(11420364-11420418)
chr1 (79-116)||(12539121-12539158)
chr1 (74-110)||(29601017-29601053)
[»] chr8 (7 HSPs)
chr8 (10-249)||(18481105-18481344)
chr8 (10-155)||(26440772-26440917)
chr8 (40-241)||(32536156-32536357)
chr8 (29-117)||(7251110-7251198)
chr8 (90-167)||(8079372-8079449)
chr8 (69-117)||(11911423-11911471)
chr8 (74-110)||(28161978-28162014)
[»] chr6 (7 HSPs)
chr6 (10-249)||(942565-942804)
chr6 (10-117)||(4513076-4513183)
chr6 (46-116)||(19047092-19047162)
chr6 (56-110)||(15950809-15950863)
chr6 (12-116)||(13757503-13757607)
chr6 (62-110)||(21698719-21698767)
chr6 (62-110)||(30063675-30063723)
[»] chr4 (15 HSPs)
chr4 (10-249)||(43989258-43989496)
chr4 (10-194)||(19315890-19316074)
chr4 (10-106)||(43813171-43813267)
chr4 (56-134)||(1394112-1394190)
chr4 (56-110)||(47783000-47783054)
chr4 (68-116)||(9633063-9633111)
chr4 (64-116)||(1479285-1479337)
chr4 (64-116)||(35096913-35096965)
chr4 (73-120)||(5124643-5124690)
chr4 (56-110)||(13200849-13200903)
chr4 (70-116)||(17283581-17283627)
chr4 (64-108)||(1311155-1311199)
chr4 (64-116)||(6969614-6969666)
chr4 (74-110)||(15065914-15065950)
chr4 (74-110)||(17459409-17459445)
[»] chr5 (16 HSPs)
chr5 (10-206)||(41197356-41197552)
chr5 (10-249)||(36779403-36779639)
chr5 (10-140)||(30376427-30376557)
chr5 (64-117)||(34525-34578)
chr5 (10-62)||(12378608-12378660)
chr5 (11-167)||(34905529-34905685)
chr5 (10-117)||(12714847-12714954)
chr5 (10-117)||(12776078-12776185)
chr5 (56-116)||(14856968-14857028)
chr5 (10-71)||(39714874-39714935)
chr5 (62-110)||(19609165-19609213)
chr5 (56-117)||(24535421-24535482)
chr5 (74-110)||(8724719-8724755)
chr5 (74-110)||(13065492-13065528)
chr5 (56-116)||(29714261-29714321)
chr5 (81-117)||(32163083-32163119)
[»] scaffold0041 (1 HSPs)
scaffold0041 (8-113)||(48110-48215)
[»] scaffold1689 (1 HSPs)
scaffold1689 (63-110)||(922-969)
[»] scaffold0114 (1 HSPs)
scaffold0114 (63-110)||(11543-11590)
[»] scaffold0251 (1 HSPs)
scaffold0251 (74-110)||(2258-2294)
[»] scaffold0071 (1 HSPs)
scaffold0071 (74-110)||(52685-52721)


Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 23820634 - 23820395
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    ||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  23820634 acatcatcataaatgtgggagctagcatgagatggatctaccctatctaattcatgagcgaccccattggcttgcctcctattgaactcgatatgagagt 23820535  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23820534 tctgaaaattacaatcaaacaactgcctacaaacctgaatgatacaacctagttcactactatcacctaggtttgaattaaagtgtacaacaacagactt 23820435  T
Q  210 ggaatccaaaacaaaattaacatggtcataatgaagatca 249  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23820434 ggaatccaaaacaaaattaacatggtcataatgaagatca 23820395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 24808771 - 24808988
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    |||||||||||||||||   ||||||||||||||| |||| |||| |||||||||||| | |||||||||||||||||||||| |||| |              
T  24808771 acatcatcataaacgtg---gctagcatgagatggggctatcctagctaattcatgagtggccccattggcttgcctcctattgaactagg--------- 24808858  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
            |||||| |||||||||| |||||| ||||||| ||||||||||||||||| |||||| ||||||||||||||||  |  |||||||||||||    
T  24808859 --------ttacaaccaaacaactgcctacaagcctgaataatacaacctagttcactactatcaactaggtttgaattaaaacgatcaacaacagactt 24808950  T
Q  210 ggaatccaaaacaaaattaacatggtcataatgaagat 247  Q
    |||||| |||||||||| |||||||||||| |||||||    
T  24808951 ggaatctaaaacaaaatcaacatggtcatagtgaagat 24808988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 155
Target Start/End: Complemental strand, 21118505 - 21118361
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    |||| |||||||||||  |||||||||  |||||| ||||||||| ||||  |||||| |||| |||| |||||||||||||| ||||||||||||||||    
T  21118505 acattatcataaacgttggagctagcaatagatggtgctaccctagctaac-catgagtgacctcattagcttgcctcctattgaactcgacatgagagt 21118407  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgataca 155  Q
    |||||||| ||   ||||||||||| |||||| | || ||||||||    
T  21118406 tctgaaaactattgtcaaacaactgtctacaagcatgcatgataca 21118361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 40901803 - 40901908
Alignment:
Q  8 ggacatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgaga 107  Q
    ||||||||||||| |  || ||||||||||||||||||||||||     ||||||||||||||||  ||| | |||||||||||| ||||||||||||||    
T  40901803 ggacatcatcatagatatgggagctagcatgagatggagctacctgtgttaattcatgagcgaccatattagtttgcctcctattcaactcgacatgaga 40901902  T
Q  108 gttctg 113  Q
    ||||||    
T  40901903 gttctg 40901908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 20492545 - 20492489
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttct 112  Q
    ||||||| |||||||||| ||| |||||||||||||||||||||| |||||||||||    
T  20492545 ctaattcgtgagcgaccctattcgcttgcctcctattaaactcgagatgagagttct 20492489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 10325112 - 10325166
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  10325112 ctaactcatgagcgacctcattcgtttgcctcctattaaactcgacatgagagtt 10325166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 29526891 - 29526837
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    ||||||||||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  29526891 ctaattcatgagcaacctcatttgcttgcctcctagtaaactcgacatgagagtt 29526837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 12980787 - 12980735
Alignment:
Q  64 tgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    |||||||||||||| | ||||||||| || |||||||||||||||||||||||    
T  12980787 tgagcgaccccattcgtttgcctcctgttgaactcgacatgagagttctgaaa 12980735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 8321192 - 8321252
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    ||||||||||||||||||| || | ||| ||| ||||||| |||||||||||||| |||||    
T  8321192 ctaattcatgagcgaccccgtttgtttgtctcgtattaaattcgacatgagagttttgaaa 8321252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 21824433 - 21824386
Alignment:
Q  63 atgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  21824433 atgagcaacctcatttgcttgcctcctaataaactcgacatgagagtt 21824386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 664993 - 665047
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||||||||| || ||| |||| ||||| |||||| |||||||||||||||||||    
T  664993 ctaattcatgtgcaacctcatttgcttgtctcctaataaactcgacatgagagtt 665047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 21588154 - 21588208
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||||||||| || ||| |||| | |||||||||| |||||||||||||||||||    
T  21588154 ctaattcatgtgcaacctcatttgattgcctcctaataaactcgacatgagagtt 21588208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 717541 - 717497
Alignment:
Q  72 cccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    |||||| ||||| |||||||||||||| ||||||||||| |||||    
T  717541 cccattagcttgtctcctattaaactcaacatgagagttttgaaa 717497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 5086640 - 5086604
Alignment:
Q  74 cattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||||||| |||||||||||||||||||    
T  5086640 cattcgcttgcctcctaataaactcgacatgagagtt 5086604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 5609531 - 5609567
Alignment:
Q  74 cattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||||||| |||||||||||||||||||    
T  5609531 cattcgcttgcctcctaataaactcgacatgagagtt 5609567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 51976871 - 51976632
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  51976871 acatcatcataaacgtgggagctagcatgagatggagctaccctagctaattcatgagcgaccccattggcttgcctcctattgaactcggcatgagagt 51976772  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
    ||||||||||||||||||||||||  |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  51976771 tctgaaaattacaatcaaacaactttctacaagcctgaataatacaacctagttcactgctatcacctaggtttgaattaaaatgttcaacaacagactt 51976672  T
Q  210 ggaatccaaaacaaaattaacatggtcataatgaagatca 249  Q
    | ||||||||||||||| ||||| ||||||||||||||||    
T  51976671 gcaatccaaaacaaaatcaacattgtcataatgaagatca 51976632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 36685016 - 36684777
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  36685016 acatcatcataaacgtgagagctagcatgagatggggctaccctagctaattcatgagcgaccccattagcttgcctcctattgaactcgacatgagagt 36684917  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
    |||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||    
T  36684916 tctgaaaattacaatcgaacaactgtctacaagcctgaatgatacaacctagttcactactatcacctaggtttgaattaaaatgttcaacaacaaactt 36684817  T
Q  210 ggaatccaaaacaaaattaacatggtcataatgaagatca 249  Q
    | ||||||||||||||| ||||| ||||||||||||||||    
T  36684816 gcaatccaaaacaaaatcaacattgtcataatgaagatca 36684777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 8705823 - 8705584
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||||| ||||||||| ||||||| |||| |||||||||||||| ||||||||||||||||    
T  8705823 acatcatcataaacgtgggagctagtatgagatggggctaccctaactaattcataagcgacctcattagcttgcctcctattgaactcgacatgagagt 8705724  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| |||||| ||||||||||||||||  || |||||||| ||||    
T  8705723 tctgaaaattacaatcaaacaactgcctacaagcctgaataatacaacctagttcactactatcaactaggtttgaattaaaacgttcaacaacatactt 8705624  T
Q  210 ggaatccaaaacaaaattaacatggtcataatgaagatca 249  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  8705623 ggaatccaaaacaaaatcaacatggtcatagtgaagatca 8705584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 9057710 - 9057471
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||||| ||||||||| ||||||| |||| |||||||||||||| ||||||||||||||||    
T  9057710 acatcatcataaacgtgggagctagtatgagatggggctaccctaactaattcataagcgacctcattagcttgcctcctattgaactcgacatgagagt 9057611  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| |||||| ||||||||||||||||  || |||||||| ||||    
T  9057610 tctgaaaattacaatcaaacaactgcctacaagcctgaataatacaacctagttcactactatcaactaggtttgaattaaaacgttcaacaacatactt 9057511  T
Q  210 ggaatccaaaacaaaattaacatggtcataatgaagatca 249  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  9057510 ggaatccaaaacaaaatcaacatggtcatagtgaagatca 9057471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 249
Target Start/End: Original strand, 4978417 - 4978654
Alignment:
Q  13 tcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttct 112  Q
    |||||||||| | | ||| ||||||||||||  ||||| ||| ||||||||||| ||||| |||||||||| ||| ||||||||||||||||||||||||    
T  4978417 tcatcataaatgcgcgagttagcatgagatgtggctacgctagctaattcatgaacgacctcattggcttgtctcatattaaactcgacatgagagttct 4978516  T
Q  113 gaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtac-aacaacagacttgg 211  Q
    |||||||| || | ||||| || |||||| || |||| ||||||||||||| |||  ||||||||||||||||||||||  || | ||||||| | ||||    
T  4978517 gaaaattataaccgaacaagtgcctacaagccagaataatacaacctagtttactattatcacctaggtttgaattaaaacgttcaaacaacatatttgg 4978616  T
Q  212 aatccaaaacaaaattaacatggtcataatgaagatca 249  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  4978617 aatccaaaacaaaattaacattgtcagaatgaagatca 4978654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 231
Target Start/End: Complemental strand, 45736577 - 45736356
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    ||||||||||||||||| ||| ||||||||||||  ||||||||| |||||| | |||||  ||||||||  ||||||||||| ||||||||||||||||    
T  45736577 acatcatcataaacgtgggagttagcatgagatgaggctaccctagctaatttacgagcgttcccattggtctgcctcctattgaactcgacatgagagt 45736478  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
    |||||||||||||||| ||||| || |||||||||| ||| |||||||||| ||||||||||||| |||| ||| |||||||  ||  ||||||| ||||    
T  45736477 tctgaaaattacaatcgaacaattgcctacaaacctaaataatacaacctaattcactgctatcatctagatttaaattaaaacgttgaacaacaaactt 45736378  T
Q  210 ggaatccaaaacaaaattaaca 231  Q
    | ||||||||||||||| ||||    
T  45736377 gaaatccaaaacaaaatcaaca 45736356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 49758966 - 49759099
Alignment:
Q  58 aattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaaattacaatcaaacaactggctacaaacctgaatgatacaac 157  Q
    ||||||||||||| |||||| |||||||||||||| ||| |||||| ||||||||||||||||||| ||| |||| | ||||||  |||||| || ||||    
T  49758966 aattcatgagcgatcccattagcttgcctcctattgaacccgacataagagttctgaaaattacaagcaagcaacagcctacaagtctgaataatgcaac 49759065  T
Q  158 ctagttcactgctatcacctaggtttgaattaaa 191  Q
    |||||||||| |||||  ||||||||||||||||    
T  49759066 ctagttcactactatcctctaggtttgaattaaa 49759099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 38998988 - 38998911
Alignment:
Q  40 gatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaaa 117  Q
    ||||| ||||||||  ||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  38998988 gatggggctaccctcgctaattcgtgagcgaccccattagcttgcctcctattaaactcgacatgagagttttgaaaa 38998911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 47165345 - 47165452
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    |||||| | |||||||| ||||||||||||||||| ||| || |  |||||||| |||||||||||||| ||||||||||||| |||||||| |||||      
T  47165345 acatcaccgtaaacgtgggagctagcatgagatggggctgcctttcctaattcacgagcgaccccattgacttgcctcctattgaactcgacgtgagaac 47165444  T
Q  110 tctgaaaa 117  Q
    ||||||||    
T  47165445 tctgaaaa 47165452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 37796696 - 37796609
Alignment:
Q  30 gctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaaa 117  Q
    ||||| || |||||| ||||||||  ||||||  ||||||||| |||| |||||||||||||||||||||||||||| ||| ||||||    
T  37796696 gctaggatcagatggggctaccctcgctaatttgtgagcgacctcattagcttgcctcctattaaactcgacatgagtgttttgaaaa 37796609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 26390800 - 26390900
Alignment:
Q  83 gcctcctattaaactcgacatgagagttctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtt 182  Q
    |||||||||| ||||||||| ||||||| | |||| ||||| |||||||||| |||||| | || || || |||||||||||||| |||||  |||||||    
T  26390800 gcctcctattgaactcgacacgagagttataaaaactacaagcaaacaactgtctacaagcttgtataatgcaacctagttcactactatcttctaggtt 26390899  T
Q  183 t 183  Q
    |    
T  26390900 t 26390900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 32073610 - 32073664
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    ||||||||||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  32073610 ctaattcatgagcaacctcatttgcttgcctcctagtaaactcgacatgagagtt 32073664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 20916465 - 20916413
Alignment:
Q  65 gagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaaa 117  Q
    |||||||| |||| |||||||||||||| ||||| |||| |||||||||||||    
T  20916465 gagcgacctcattcgcttgcctcctattgaactcaacataagagttctgaaaa 20916413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 20925427 - 20925375
Alignment:
Q  65 gagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaaa 117  Q
    |||||||| |||| |||||||||||||| ||||| |||| |||||||||||||    
T  20925427 gagcgacctcattcgcttgcctcctattgaactcaacataagagttctgaaaa 20925375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 2439546 - 2439499
Alignment:
Q  63 atgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  2439546 atgagcaacctcatttgcttgcctcctaataaactcgacatgagagtt 2439499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 8968408 - 8968444
Alignment:
Q  74 cattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||||||| |||||||||||||||||||    
T  8968408 catttgcttgcctcctaataaactcgacatgagagtt 8968444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 9734472 - 9734508
Alignment:
Q  74 cattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||||||| |||||||||||||||||||    
T  9734472 catttgcttgcctcctaataaactcgacatgagagtt 9734508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 10346537 - 10346589
Alignment:
Q  64 tgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    |||||||||| ||| ||||||||||| || ||||| ||||| |||||||||||    
T  10346537 tgagcgaccctattcgcttgcctcctgttgaactctacatgcgagttctgaaa 10346589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 15790088 - 15790052
Alignment:
Q  74 cattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||||||| |||||||||||||||||||    
T  15790088 cattcgcttgcctcctagtaaactcgacatgagagtt 15790052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 27265863 - 27265803
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    ||||||| ||||||||| |||| | ||| ||| |||||||||| ||||||||||| |||||    
T  27265863 ctaattcgtgagcgacctcattagtttgtctcttattaaactcaacatgagagttttgaaa 27265803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 34935134 - 34935098
Alignment:
Q  74 cattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||||||| |||||||||||||||||||    
T  34935134 catttgcttgcctcctaataaactcgacatgagagtt 34935098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 29894321 - 29894560
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29894321 acatcatcataaacgtgggagctagcatgagatggggctaccctagctaattcatgagcgaccccattggcttgcctcctattgaactcgacatgagagt 29894420  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
    |||||||||||||||| |||||||| |||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  29894421 tctgaaaattacaatcgaacaactgtctacaagcctgaataatacaatctagttcactgctatcacctaggtttgaattaaaatgttcaacaacagactt 29894520  T
Q  210 ggaatccaaaacaaaattaacatggtcataatgaagatca 249  Q
    | ||||||||||||||| ||||| ||||||||||||||||    
T  29894521 gcaatccaaaacaaaatcaacattgtcataatgaagatca 29894560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 24543324 - 24543085
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  24543324 acatcatcataaacgtgggagctagcatgagatggggctaccctagctaattcatgagcgaccccattggcttgcatcctattgaactcgacatgagagt 24543225  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
    |||||||||||||||| |||||||  |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  24543224 tctgaaaattacaatcgaacaactatctacaagcctgaataatacaacctagttcactgctatcacctaggtttgaattaaaatgttcaacaacagactt 24543125  T
Q  210 ggaatccaaaacaaaattaacatggtcataatgaagatca 249  Q
    | ||||||||||||||| ||||| ||||||||||||||||    
T  24543124 gcaatccaaaacaaaatcaacattgtcataatgaagatca 24543085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 36365151 - 36364912
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    |||||| |||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  36365151 acatcaccataaacgtgggagctagcatgagatggggctaccctagctaattcatgagcgacctcattggcttgcctcctattgaactcgacatgggagt 36365052  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
    ||||||||| |||||| |||||||| ||||||   ||||| |||||||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  36365051 tctgaaaatgacaatcgaacaactgcctacaagtatgaataatacaacctagttcactgctatcacctaggtttgaattaaaacgttcaacaacagactt 36364952  T
Q  210 ggaatccaaaacaaaattaacatggtcataatgaagatca 249  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  36364951 ggaatccaaaacaaaatcaacattgtcataatgaagatca 36364912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 40287037 - 40287124
Alignment:
Q  30 gctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaaa 117  Q
    ||||| || |||||| ||||||||  |||||||||||| ||||||||| ||||||||| ||||||||| |||||||||||| ||||||    
T  40287037 gctaggatcagatggggctaccctcgctaattcatgagtgaccccattagcttgcctcatattaaacttgacatgagagttttgaaaa 40287124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 12555415 - 12555466
Alignment:
Q  66 agcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaaa 117  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||||||||||    
T  12555415 agcgaccccattaacttgcctcctattgaacttgacatgagagttctgaaaa 12555466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 21085019 - 21085055
Alignment:
Q  74 cattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||||||| |||||||||||||||||||    
T  21085019 catttgcttgcctcctaataaactcgacatgagagtt 21085055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 31426506 - 31426458
Alignment:
Q  62 catgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    ||||||| ||| |||| ||||||||| || |||||||||||||||||||    
T  31426506 catgagcaacctcatttgcttgcctcttaataaactcgacatgagagtt 31426458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 184; Significance: 1e-99; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 11351597 - 11351836
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    |||||||||||||||||  |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11351597 acatcatcataaacgtggaagctagcatgagatggggctaccctagctaattcatgagcgaccccattggcttgcctcctattgaactcgacatgagagt 11351696  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
    |||||||||||||||| |||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  11351697 tctgaaaattacaatcgaacaactgtctacaagcctgaataatacaacctagttcactgctatcacctaggtttgaattaaaatgttcaacaacagactt 11351796  T
Q  210 ggaatccaaaacaaaattaacatggtcataatgaagatca 249  Q
    | ||||||||||||||| ||||| ||||||||||||||||    
T  11351797 gcaatccaaaacaaaatcaacattgtcataatgaagatca 11351836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 10 - 225
Target Start/End: Complemental strand, 21515314 - 21515101
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||  |    
T  21515314 acatcatcataaacgtgggagctagcatgagatggggctaccctagctaattcatgagcgaccccattggcttgcctcctattgaactcgacatgag--t 21515217  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
    ||||||||||||| || |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  21515216 tctgaaaattacattcgaacaactgcctacaaacctgaaaaatacaacctagttcactgctatcacctaggtttgaattaaaacgttcaacaacagactt 21515117  T
Q  210 ggaatccaaaacaaaa 225  Q
    | ||||||||||||||    
T  21515116 gcaatccaaaacaaaa 21515101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 6784389 - 6784152
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    |||| ||||||||||||  |||||| |||||||||||||||||||  |||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  6784389 acattatcataaacgtggaagctagtatgagatggagctaccctagttaattcataagcgaccccattggcttgcctcctattgaactcgacatgagagt 6784290  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
    ||||||||| |||||| |||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||  || |||||| ||||||    
T  6784289 tctgaaaataacaatcgaacaactgtctacaagcctgaataatacaacctagttcactgctatcacctaggtttaaattaaaacgttcaacaagagactt 6784190  T
Q  210 ggaatccaaaacaaaattaacatggtcataatgaagat 247  Q
    | ||||||||||||||| ||||| ||||||| ||||||    
T  6784189 gcaatccaaaacaaaatcaacattgtcataacgaagat 6784152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 56 - 249
Target Start/End: Complemental strand, 20639655 - 20639462
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaaattacaatcaaacaactggctacaaacctgaatgataca 155  Q
    |||||||||||| |||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| |||||| ||||||| |||||    
T  20639655 ctaattcatgagtgacctcattggcttgcctcctattgaactcaacatgagagttctgaaaattacaatcgaacaactgcctacaagcctgaataataca 20639556  T
Q  156 acctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagacttggaatccaaaacaaaattaacatggtcataatgaagatca 249  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  20639555 acctagttcactactatcacctaggtttgaattaaaatgttcaacaacaaacttggaatccaaaacaaaatcaacattgtcataatgaagatca 20639462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 32988886 - 32989125
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctat---ta-aactcgacatga 105  Q
    ||||||||||||||| |  |||||||||||||||| ||||||||| |||||||||||||||    |||||||||||||||||   || ||||||||||||    
T  32988886 acatcatcataaacgcggaagctagcatgagatggggctaccctaactaattcatgagcgaaa--attggcttgcctcctatatatataactcgacatga 32988983  T
Q  106 gagttctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacag 205  Q
    ||||||||||| |||||||| |||||||| ||||||  |||||| ||||||||||||||||||||||||| || |||| |||||||  || ||||||||     
T  32988984 gagttctgaaagttacaatcgaacaactgcctacaagtctgaataatacaacctagttcactgctatcacgtaagtttaaattaaaacgttcaacaacat 32989083  T
Q  206 acttggaatccaaaacaaaattaacatggtcataatgaagat 247  Q
    ||||||||||| |||||||||  |||| ||||||||||||||    
T  32989084 acttggaatccgaaacaaaatccacatcgtcataatgaagat 32989125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 2536489 - 2536589
Alignment:
Q  17 cataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    ||||||| || ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2536489 cataaacatgggagctagcatgagatggggctaccctaactaattcatgagcgaccccattggcttgcctcctattgaactcgacatgagagttctgaaa 2536588  T
Q  117 a 117  Q
    |    
T  2536589 a 2536589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 44839857 - 44840002
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    |||| |||||||||||  |||||||||| |||||| ||||||||| |||| |||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  44839857 acattatcataaacgtaggagctagcattagatggggctaccctagctaactcatgagcgaccccattaacttgcctcctattgaactcgacatgagagt 44839956  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgataca 155  Q
    |||||||| ||   |||||||| || |||||| | || ||||||||    
T  44839957 tctgaaaactattgtcaaacaattgtctacaagcatgcatgataca 44840002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 51080701 - 51080779
Alignment:
Q  39 agatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaaa 117  Q
    |||||| ||||||||  |||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||    
T  51080701 agatggggctaccctcgctaattcatgagcgaccccattagattgcctcctattaaactcgacatgagagttttgaaaa 51080779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 39648376 - 39648462
Alignment:
Q  29 agctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaa 115  Q
    |||||||||||||||| ||||||  | |||||||||||||||||  ||| ||||| || ||||||||||||||| ||||||||||||    
T  39648376 agctagcatgagatggggctacctgagctaattcatgagcgacctaattagcttgacttctattaaactcgacacgagagttctgaa 39648462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 26418791 - 26418845
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    ||||||||||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  26418791 ctaattcatgagcaacctcatttgcttgcctcctagtaaactcgacatgagagtt 26418845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 32108489 - 32108435
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    ||||||||||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  32108489 ctaattcatgagcaacctcatttgcttgcctcctagtaaactcgacatgagagtt 32108435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 52823473 - 52823539
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccat 76  Q
    |||||||| ||||| |  ||| ||| ||||||||||||||||||| |||||||||||||||||||||    
T  52823473 acatcatcgtaaacataggagttagtatgagatggagctaccctaactaattcatgagcgaccccat 52823539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 2114421 - 2114361
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    ||||||| |||||||||||||| |||| | |||| || |||||||||||||||||||||||    
T  2114421 ctaattcgtgagcgaccccattcgcttccttcctgttgaactcgacatgagagttctgaaa 2114361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 3601275 - 3601327
Alignment:
Q  64 tgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    ||||| ||| |||| |||||||||||||| |||||||||||||||||||||||    
T  3601275 tgagcaacctcattcgcttgcctcctattgaactcgacatgagagttctgaaa 3601327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 4180028 - 4179980
Alignment:
Q  62 catgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    ||||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  4180028 catgagcaacctcatttgcttgcctcctaataaactcgacatgagagtt 4179980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 5811440 - 5811388
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagag 108  Q
    |||||| |||||| |||||||| | ||| ||||||||||||||||||||||||    
T  5811440 ctaattaatgagctaccccatttgtttgtctcctattaaactcgacatgagag 5811388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 17321932 - 17321880
Alignment:
Q  64 tgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    ||||| |||| ||| ||||||||||| || |||||||||||||||||||||||    
T  17321932 tgagctaccctatttgcttgcctcctgttgaactcgacatgagagttctgaaa 17321880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 22161807 - 22161760
Alignment:
Q  63 atgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  22161807 atgagcaacctcattcgcttgcctcctaataaactcgacatgagagtt 22161760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 11420364 - 11420418
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    ||||||||||| | ||| ||||  ||||||||||| |||||||||||||||||||    
T  11420364 ctaattcatgaacaacctcatttacttgcctcctaataaactcgacatgagagtt 11420418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 12539158 - 12539121
Alignment:
Q  79 gcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    ||||||||||| || |||||||||||||||||||||||    
T  12539158 gcttgcctcctgttgaactcgacatgagagttctgaaa 12539121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 29601053 - 29601017
Alignment:
Q  74 cattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||||||| |||||||||||||||||||    
T  29601053 catttgcttgcctcctaataaactcgacatgagagtt 29601017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 4e-90; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 18481344 - 18481105
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||||||||||||    
T  18481344 acatcatcataaacgtgggagctagcatgagatggggctaccctagctaatttatgagtgaccccattgacttacctcctattgaactcgacatgagagt 18481245  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
    |||||||||||||||| |||||||  |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  18481244 tctgaaaattacaatcgaacaactatctacaagcctgaataatacaacctagttcactgctatcacctaggtttgaattaaaatgttcaacaacagactt 18481145  T
Q  210 ggaatccaaaacaaaattaacatggtcataatgaagatca 249  Q
    | ||||||||||||||| ||||| ||||||||||||||||    
T  18481144 gcaatccaaaacaaaatcaacattgtcataatgaagatca 18481105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 155
Target Start/End: Complemental strand, 26440917 - 26440772
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    |||| ||||||| ||||||||||||||| |||||| ||||||||| |||| |||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  26440917 acattatcataatcgtgagagctagcattagatggggctaccctagctaactcatgagcaaccccattagcttgcctcctattgaactcgacatgagagt 26440818  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgataca 155  Q
    ||| |||| ||   ||||||||||| |||||| | || ||||||||    
T  26440817 tctaaaaactattgtcaaacaactgtctacaagcatgcatgataca 26440772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 241
Target Start/End: Original strand, 32536156 - 32536357
Alignment:
Q  40 gatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaaattacaatcaaacaactggctac 139  Q
    ||||| ||||||||| |||||||| |||||||||||||  ||||  | | ||| |||||||||| |||||||  |||||||||| ||| ||| ||  |||    
T  32536156 gatggggctaccctagctaattcacgagcgaccccattaacttgttttcaattgaactcgacataagagttcataaaattacaagcaatcaattgtttac 32536255  T
Q  140 aaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagacttggaatccaaaacaaaattaacatggtcata 239  Q
    || ||||||| |||||||||||||||||  ||||  |||||||||||| |||| |  | |||| | ||||| |||||||| ||||||  ||||| |||||    
T  32536256 aagcctgaataatacaacctagttcactattatcgtctaggtttgaatgaaagcgatctacaataaacttgtaatccaaagcaaaatcgacatgatcata 32536355  T
Q  240 at 241  Q
    ||    
T  32536356 at 32536357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 7251198 - 7251110
Alignment:
Q  29 agctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaaa 117  Q
    |||||||||||||||| |||||| ||  |||| |||||| || |||||||| |||||||||||| |||||||||| |||||||||||||    
T  7251198 agctagcatgagatggggctaccttagttaatgcatgagtgatcccattggtttgcctcctattgaactcgacataagagttctgaaaa 7251110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 8079372 - 8079449
Alignment:
Q  90 attaaactcgacatgagagttctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcact 167  Q
    ||||||||||||||||||||| |||||| ||  || ||||||| | ||||| || | || ||||||||| ||||||||    
T  8079372 attaaactcgacatgagagttttgaaaactatcatgaaacaaccgtctacagacattaacgatacaaccaagttcact 8079449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 11911423 - 11911471
Alignment:
Q  69 gaccccattggcttgcctcctattaaactcgacatgagagttctgaaaa 117  Q
    ||||||||| | || ||||||||| ||||||||||||||||| ||||||    
T  11911423 gaccccattcgtttacctcctattgaactcgacatgagagttttgaaaa 11911471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 28161978 - 28162014
Alignment:
Q  74 cattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||||||| |||||||||||||||||||    
T  28161978 catttgcttgcctcctaataaactcgacatgagagtt 28162014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 6e-83; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 942804 - 942565
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    |||||||| |||||||| ||| ||||||||||||| | |  |||| |||||||| |||||||||||||||||||||||||||| |||||||||| |||||    
T  942804 acatcatcgtaaacgtgggagatagcatgagatggggttgtcctagctaattcacgagcgaccccattggcttgcctcctattgaactcgacattagagt 942705  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
    |||||||||||||||| |||||||| |||||| ||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||| |||||||||||||    
T  942704 tctgaaaattacaatcgaacaactgcctacaagcctgaataatacaacctagttcactactatcacctaggtttgacttaaaatgttcaacaacagactt 942605  T
Q  210 ggaatccaaaacaaaattaacatggtcataatgaagatca 249  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  942604 ggaatccaaaacaaaatcaacattgtcataatgaagatca 942565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 4513183 - 4513076
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    |||| ||||||||| || ||||||| ||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  4513183 acattatcataaacatgggagctagtatgagatggggctaccctagctaattcattagcgaccccattggcttgcctcctattgaactcgacatgagagt 4513084  T
Q  110 tctgaaaa 117  Q
    ||||||||    
T  4513083 tctgaaaa 4513076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 19047162 - 19047092
Alignment:
Q  46 gctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    ||||||||  ||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||    
T  19047162 gctaccctcgctaattcgtgagcgaccacattagcttgcctcctattaaactcgacatgagagttttgaaa 19047092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 15950863 - 15950809
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    ||||||||||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  15950863 ctaattcatgagcaacctcatttgcttgcctcctagtaaactcgacatgagagtt 15950809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 13757503 - 13757607
Alignment:
Q  12 atcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttc 111  Q
    |||||||||||  |  ||||||| || | ||||||||| |||| ||||||| ||||||||| |||| | |||| || |||||||||| |||||||||||     
T  13757503 atcatcataaaaattggagctaggattatatggagctatcctagctaattcgtgagcgacctcattagtttgcttcttattaaactcaacatgagagttt 13757602  T
Q  112 tgaaa 116  Q
    |||||    
T  13757603 tgaaa 13757607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 21698767 - 21698719
Alignment:
Q  62 catgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    ||||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  21698767 catgagcaacctcatttgcttgcctcctaataaactcgacatgagagtt 21698719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 30063675 - 30063723
Alignment:
Q  62 catgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    ||||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  30063675 catgagcaacctcatttgcttgcctcctaataaactcgacatgagagtt 30063723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 43989258 - 43989496
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||    
T  43989258 acatcatcataaacgtgggagctagcatgagatggggctaccctaactaattcatgagcgacctcattggcttgcctcctattgaactcgacatgagcgt 43989357  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
    ||| |||| ||||||| ||||| || || ||| ||||||| |||||||||||||||||||||||||||||||||||||||||  || |||||||| ||||    
T  43989358 tct-aaaaatacaatcgaacaattgtctgcaagcctgaataatacaacctagttcactgctatcacctaggtttgaattaaaacgttcaacaacaaactt 43989456  T
Q  210 ggaatccaaaacaaaattaacatggtcataatgaagatca 249  Q
    | ||||||||||||||| ||||| ||||||||||||||||    
T  43989457 gcaatccaaaacaaaatcaacattgtcataatgaagatca 43989496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 194
Target Start/End: Original strand, 19315890 - 19316074
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    |||| ||||||| |||| |||||| ||| || ||| ||||||    ||||||||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  19315890 acataatcataagcgtgggagctaccataaggtggggctacctgtgctaattcatgaacgactccattggcttgcctcctattgaactcgacatgagagt 19315989  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtg 194  Q
    |||||||| |   | |||||||||  |||||| | || || || |||||||| ||||| |||||| |||  ||||| ||||||||    
T  19315990 tctgaaaactgttaacaaacaactatctacaagcatgtataatgcaacctagctcactactatcatctacatttgacttaaagtg 19316074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 43813171 - 43813267
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgag 106  Q
    ||||||||| ||||| ||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||| |||| || ||||| |||||||||||||    
T  43813171 acatcatcaaaaacgagagagctagtatgagatggggctaccctaactaattcatgaacgaccccattgacttgtctgctattgaactcgacatgag 43813267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 1394190 - 1394112
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaaattacaatcaaacaactg 134  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||| ||   |||||||||||    
T  1394190 ctaattcatgaacgaccccattagcttgcctcctattgaactcgacatgagagttctgaaaactattgtcaaacaactg 1394112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 47783054 - 47783000
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    ||||||||||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  47783054 ctaattcatgagcaacctcatttgcttgcctcctagtaaactcgacatgagagtt 47783000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 9633111 - 9633063
Alignment:
Q  68 cgaccccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    ||||||||||  ||||||||||||| |||||||||||||||||||||||    
T  9633111 cgaccccattcacttgcctcctattgaactcgacatgagagttctgaaa 9633063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 1479285 - 1479337
Alignment:
Q  64 tgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    |||| |||||||||  ||||||||||||| ||||||| |||||||||||||||    
T  1479285 tgagtgaccccatttacttgcctcctattgaactcgatatgagagttctgaaa 1479337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 35096965 - 35096913
Alignment:
Q  64 tgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    ||||| |||| ||| |||||||| ||||| |||||||||||||||||||||||    
T  35096965 tgagcaaccctatttgcttgccttctattgaactcgacatgagagttctgaaa 35096913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 5124643 - 5124690
Alignment:
Q  73 ccattggcttgcctcctattaaactcgacatgagagttctgaaaatta 120  Q
    ||||| |||||||||| ||| |||||||||| ||||||||||||||||    
T  5124643 ccattagcttgcctccgattgaactcgacattagagttctgaaaatta 5124690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 13200903 - 13200849
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||| ||| |||| |||||||||||| | |||||||||||||||||    
T  13200903 ctaactcatgagcaacctcatttgcttgcctcctaatgaactcgacatgagagtt 13200849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 17283581 - 17283627
Alignment:
Q  70 accccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    |||||||| | |||||||||||| |||||||||| ||||||||||||    
T  17283581 accccattcgtttgcctcctattgaactcgacataagagttctgaaa 17283627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 1311199 - 1311155
Alignment:
Q  64 tgagcgaccccattggcttgcctcctattaaactcgacatgagag 108  Q
    ||||||||| ||||| ||| ||||||||||||||| |||||||||    
T  1311199 tgagcgacctcattgacttacctcctattaaactcaacatgagag 1311155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 6969666 - 6969614
Alignment:
Q  64 tgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    ||||||||||||||  ||| |||| |||| || ||||||||||||||||||||    
T  6969666 tgagcgaccccatttacttacctcttattgaaatcgacatgagagttctgaaa 6969614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 15065950 - 15065914
Alignment:
Q  74 cattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||||||| |||||||||||||||||||    
T  15065950 cattcgcttgcctcctaataaactcgacatgagagtt 15065914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 17459445 - 17459409
Alignment:
Q  74 cattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||||||| |||||||||||||||||||    
T  17459445 cattcgcttgcctcctaataaactcgacatgagagtt 17459409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 41197356 - 41197552
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  41197356 acatcatcataaacgtgggagctagcatgagatggggctaccctagctaattcatgagcgaccccattggcttgcctcctattgaactcgacataagagt 41197455  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacaga 206  Q
    |||||||||||||||| |||||||| ||| || ||| ||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  41197456 tctgaaaattacaatcgaacaactgtctataagcctaaataatacaacctagttcactgctatcacctaggtttgaattaaaatgttcaacaacaga 41197552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 36779403 - 36779639
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    ||||||||||| ||||| |||||| ||| ||||||  |||||||| ||||| |||||| ||| | ||||||||||||||||||  |||||||||||||||    
T  36779403 acatcatcatagacgtgggagctaacat-agatgggactaccctagctaatccatgagtgacactattggcttgcctcctattgtactcgacatgagagt 36779501  T
Q  110 tctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcactgctatcacctaggtttgaattaaagtgtacaacaacagactt 209  Q
    ||||||  |||||| |||||||||| |||||| ||| ||| ||||||||||||||||| || |||  |||||||||||||||  || |||||| ||||||    
T  36779502 tctgaa--ttacaaccaaacaactgcctacaagccttaataatacaacctagttcactactctcaattaggtttgaattaaaacgttcaacaatagactt 36779599  T
Q  210 ggaatccaaaacaaaattaacatggtcataatgaagatca 249  Q
    ||||||||||| ||||| |||||||| ||| |||||||||    
T  36779600 ggaatccaaaataaaatcaacatggttatagtgaagatca 36779639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 30376427 - 30376557
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    ||||||||||||||||  ||||||||||||||||  |||||| || |||||||||||||||||| |||||||||||||||||| |||||||||| |||||    
T  30376427 acatcatcataaacgttggagctagcatgagatgaggctaccgtagctaattcatgagcgaccctattggcttgcctcctattgaactcgacataagagt 30376526  T
Q  110 tctgaaaattacaatcaaacaactggctaca 140  Q
    | ||||||||| |||| |||||||| |||||    
T  30376527 tttgaaaattataatcgaacaactgcctaca 30376557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 34578 - 34525
Alignment:
Q  64 tgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaaa 117  Q
    |||||||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  34578 tgagcgaccatattggcttgcttcctattaaactcgacatgagagttctgaaaa 34525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 12378608 - 12378660
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattc 62  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||| |||||||    
T  12378608 acatcatcataaacgtgggagctagcatgagatggggctaccctagctaattc 12378660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 34905685 - 34905529
Alignment:
Q  11 catcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    ||||||| ||||| || ||| ||||||||||| | |||||     ||||||||||||||||| |||||| ||| |||||||| ||||| |||  ||||||    
T  34905685 catcatcgtaaacttgggagttagcatgagatcgggctacttgggctaattcatgagcgacctcattggtttgtctcctattgaactcaacacaagagtt 34905586  T
Q  111 ctgaaaattacaatcaaacaactggctacaaacctgaatgatacaacctagttcact 167  Q
    ||||||| ||  | |||||||||| |||||| | || || | ||||||||| |||||    
T  34905585 ctgaaaactattaacaaacaactgtctacaagcatgtataacacaacctagctcact 34905529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 12714847 - 12714954
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    |||||||||||||| |||||||||||||| ||||| | ||||    |||||| |||| |||||||||| | |||| |||| || ||| | ||||||||||    
T  12714847 acatcatcataaacatgagagctagcatgtgatggggttacctctgctaatttatgaacgaccccattaggttgcttccttttgaacccaacatgagagt 12714946  T
Q  110 tctgaaaa 117  Q
    ||||||||    
T  12714947 tctgaaaa 12714954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 12776078 - 12776185
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagt 109  Q
    |||||||||||||| |||||||||||||| ||||| | ||||    |||||| |||| |||||||||| | |||| |||| || ||| | ||||||||||    
T  12776078 acatcatcataaacatgagagctagcatgtgatggggttacctctgctaatttatgaacgaccccattaggttgcttccttttgaacccaacatgagagt 12776177  T
Q  110 tctgaaaa 117  Q
    ||||||||    
T  12776178 tctgaaaa 12776185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 14856968 - 14857028
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    ||||||||||||||| | |||| | ||||||| |||||||||||||||||||||| |||||    
T  14856968 ctaattcatgagcgatcacatttgtttgcctcatattaaactcgacatgagagttttgaaa 14857028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 39714935 - 39714874
Alignment:
Q  10 acatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgac 71  Q
    ||||||||||||||||||||||||  || || ||| ||||| ||| ||||||||||||||||    
T  39714935 acatcatcataaacgtgagagctaatataaggtggggctacactaactaattcatgagcgac 39714874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 19609165 - 19609213
Alignment:
Q  62 catgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    ||||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  19609165 catgagcaacctcatttgcttgcctcctaataaactcgacatgagagtt 19609213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 24535421 - 24535482
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaaa 117  Q
    ||||||||||||  ||| |||| ||||| ||| ||||||||||||||| |||||| ||||||    
T  24535421 ctaattcatgagtaacctcattagcttgtctcgtattaaactcgacataagagttatgaaaa 24535482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 8724755 - 8724719
Alignment:
Q  74 cattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||||||| |||||||||||||||||||    
T  8724755 cattcgcttgcctcctagtaaactcgacatgagagtt 8724719  T

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Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 13065492 - 13065528
Alignment:
Q  74 cattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||||||| |||||||||||||||||||    
T  13065492 cattcgcttgcctcctagtaaactcgacatgagagtt 13065528  T

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Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 29714321 - 29714261
Alignment:
Q  56 ctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgagagttctgaaa 116  Q
    |||| ||||||| | | ||||| ||||| |||||||||||||||||||| ||||| |||||    
T  29714321 ctaactcatgagtgtcaccattagcttgtctcctattaaactcgacatgcgagttttgaaa 29714261  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 32163119 - 32163083
Alignment:
Q  81 ttgcctcctattaaactcgacatgagagttctgaaaa 117  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  32163119 ttgcctcctattaaactcgatatgagagttttgaaaa 32163083  T

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Target: scaffold0041 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 48215 - 48110
Alignment:
Q  8 ggacatcatcataaacgtgagagctagcatgagatggagctaccctatctaattcatgagcgaccccattggcttgcctcctattaaactcgacatgaga 107  Q
    ||||||||||||| |  || ||||||||||||||||||||||||     ||||||||||||||||  ||| | |||||||||||| ||||||||||||||    
T  48215 ggacatcatcatagatatgggagctagcatgagatggagctacctgtgttaattcatgagcgaccatattagtttgcctcctattcaactcgacatgaga 48116  T
Q  108 gttctg 113  Q
    ||||||    
T  48115 gttctg 48110  T

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Target: scaffold1689 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1689
Description:

Target: scaffold1689; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 969 - 922
Alignment:
Q  63 atgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  969 atgagcaacctcatttgcttgcctcctaataaactcgacatgagagtt 922  T

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Target: scaffold0114 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 11543 - 11590
Alignment:
Q  63 atgagcgaccccattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  11543 atgagcaacctcatttgcttgcctcctaataaactcgacatgagagtt 11590  T

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Target: scaffold0251 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 2258 - 2294
Alignment:
Q  74 cattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||||||| |||||||||||||||||||    
T  2258 cattcgcttgcctcctagtaaactcgacatgagagtt 2294  T

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Target: scaffold0071 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 52721 - 52685
Alignment:
Q  74 cattggcttgcctcctattaaactcgacatgagagtt 110  Q
    |||| |||||||||||| |||||||||||||||||||    
T  52721 catttgcttgcctcctaataaactcgacatgagagtt 52685  T

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