View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20633_high_157 (Length: 250)
Name: NF20633_high_157
Description: NF20633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20633_high_157 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 45768466 - 45768709
Alignment:
| Q |
1 |
catttcttgaagaaacagaaaatgtttgtggactattatcagcagtgcgcgatgctgctacttcttcttttgctttgtgaaacttcaatgagagactttg |
100 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
45768466 |
catttcttgaagaagcagaaaatgtttgtggactattatcagcagtgcgcgatgctgctacttcttcttttgctttgtgaaacttcactgagagactttg |
45768565 |
T |
|
| Q |
101 |
attttgagcttttgttgaatgttttgatggagactcatttgacatagaattcacattattctcatttttattcaactgtggcttccaagtatctacttcg |
200 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45768566 |
attttgagcttttgttgaatgttttgatggagattcatttgacatagaattcacattattctcatttttattcaactgtggcttccaagtatctacttcg |
45768665 |
T |
|
| Q |
201 |
agaatcttatcacttttatgttcatcagggtgtatattcttcga |
244 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
45768666 |
agaatcttatcacttttatgttcatcagggtgtctattcttcga |
45768709 |
T |
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