View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20633_high_195 (Length: 236)
Name: NF20633_high_195
Description: NF20633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20633_high_195 |
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Alignment Details
Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 17767634 - 17767869
Alignment:
| Q |
1 |
tattaaccacatatgtgaacacaatattaaatttgatacgtttggacataaaatcttcaaagggcttctacgattgtttaaagcatttatcctttcttgc |
100 |
Q |
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| T |
17767634 |
tattaaccacatatgtgaacacaatattaaatttgatacgtttggacataaaatcttcaaagggcttctacgattgtttaaagcatttatcctttcttgc |
17767733 |
T |
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| Q |
101 |
caatttgtttataattagatgggacagtttggtctttttaataaaattgttaaaccaccaac--------------ataatatttgttaaagacctccta |
186 |
Q |
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| T |
17767734 |
caatttgtttataattagatgggacagtttggtctttttaataaaattgttaaaccaccaacataatatttgttaaataatatttgttaaagacctccta |
17767833 |
T |
|
| Q |
187 |
agtgaattaacaaagttttctcttggagttggaatt |
222 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
17767834 |
agtgaattaacaaagttttctcttggagttggaatt |
17767869 |
T |
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